Multiple sequence alignment - TraesCS1D01G386900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G386900 chr1D 100.000 3059 0 0 1 3059 459819686 459816628 0.000000e+00 5650.0
1 TraesCS1D01G386900 chr1D 83.948 1221 169 17 975 2188 410495449 410496649 0.000000e+00 1144.0
2 TraesCS1D01G386900 chr1D 84.505 1181 154 24 1017 2188 462359238 462358078 0.000000e+00 1140.0
3 TraesCS1D01G386900 chr1D 86.822 516 58 5 1674 2188 462312978 462312472 4.430000e-158 568.0
4 TraesCS1D01G386900 chr1D 86.275 51 5 2 1 51 18101147 18101099 2.000000e-03 54.7
5 TraesCS1D01G386900 chr1B 88.196 1508 119 25 694 2160 631824443 631825932 0.000000e+00 1744.0
6 TraesCS1D01G386900 chr1B 96.694 726 24 0 2334 3059 631826136 631826861 0.000000e+00 1208.0
7 TraesCS1D01G386900 chr1B 87.226 1049 122 6 1141 2188 637388663 637387626 0.000000e+00 1184.0
8 TraesCS1D01G386900 chr1B 84.219 1223 168 15 975 2187 553138388 553139595 0.000000e+00 1166.0
9 TraesCS1D01G386900 chr1B 89.682 911 88 3 1279 2188 637478371 637477466 0.000000e+00 1157.0
10 TraesCS1D01G386900 chr1B 91.586 725 48 1 2335 3059 641683522 641684233 0.000000e+00 989.0
11 TraesCS1D01G386900 chr1B 96.134 388 14 1 29 416 49637262 49637648 1.550000e-177 632.0
12 TraesCS1D01G386900 chr1B 90.152 132 13 0 1928 2059 553142271 553142402 4.060000e-39 172.0
13 TraesCS1D01G386900 chr1A 84.426 1220 164 18 975 2188 506541024 506542223 0.000000e+00 1177.0
14 TraesCS1D01G386900 chr5A 91.790 743 58 1 2320 3059 663617393 663618135 0.000000e+00 1031.0
15 TraesCS1D01G386900 chr5A 94.072 388 22 1 29 416 618248213 618247827 3.400000e-164 588.0
16 TraesCS1D01G386900 chr5A 90.129 233 23 0 410 642 423925281 423925049 1.380000e-78 303.0
17 TraesCS1D01G386900 chr4D 89.847 522 49 2 2320 2838 483530290 483530810 0.000000e+00 667.0
18 TraesCS1D01G386900 chr4D 88.931 524 50 5 2320 2838 483560162 483560682 9.250000e-180 640.0
19 TraesCS1D01G386900 chr4D 89.286 420 44 1 2641 3059 483586420 483586839 2.700000e-145 525.0
20 TraesCS1D01G386900 chr5D 96.649 388 13 0 29 416 412270026 412269639 0.000000e+00 645.0
21 TraesCS1D01G386900 chr5D 97.479 238 5 1 406 642 435799768 435799531 3.670000e-109 405.0
22 TraesCS1D01G386900 chr5D 92.857 42 2 1 1 42 537116627 537116587 3.290000e-05 60.2
23 TraesCS1D01G386900 chr5D 87.037 54 4 3 1 53 294497916 294497865 1.180000e-04 58.4
24 TraesCS1D01G386900 chr5D 89.362 47 2 2 1 46 452470114 452470070 4.260000e-04 56.5
25 TraesCS1D01G386900 chr4A 95.361 388 18 0 29 416 684062028 684062415 4.330000e-173 617.0
26 TraesCS1D01G386900 chr4A 94.845 388 17 1 29 416 613573359 613573743 1.210000e-168 603.0
27 TraesCS1D01G386900 chr4A 93.074 231 16 0 409 639 706872181 706872411 3.780000e-89 339.0
28 TraesCS1D01G386900 chr3D 95.361 388 17 1 29 416 527130437 527130823 1.560000e-172 616.0
29 TraesCS1D01G386900 chr3D 91.213 239 20 1 406 643 609356116 609356354 1.060000e-84 324.0
30 TraesCS1D01G386900 chr3D 91.111 45 1 3 1 42 350676805 350676849 1.180000e-04 58.4
31 TraesCS1D01G386900 chr3D 90.698 43 2 2 1 43 543752303 543752343 4.260000e-04 56.5
32 TraesCS1D01G386900 chr3B 79.016 915 179 11 1172 2078 27035837 27036746 5.610000e-172 614.0
33 TraesCS1D01G386900 chr3B 94.118 238 13 1 406 642 816249405 816249168 8.060000e-96 361.0
34 TraesCS1D01G386900 chr3A 78.907 915 180 11 1172 2078 16889483 16890392 2.610000e-170 608.0
35 TraesCS1D01G386900 chr3A 80.028 726 120 19 2345 3059 19521087 19521798 5.850000e-142 514.0
36 TraesCS1D01G386900 chr3A 94.979 239 11 1 406 643 60197051 60196813 1.040000e-99 374.0
37 TraesCS1D01G386900 chr3A 94.421 233 13 0 410 642 747300851 747300619 2.900000e-95 359.0
38 TraesCS1D01G386900 chr5B 94.330 388 22 0 29 416 696451382 696451769 2.030000e-166 595.0
39 TraesCS1D01G386900 chr6D 94.072 388 23 0 29 416 435299336 435298949 9.450000e-165 590.0
40 TraesCS1D01G386900 chr6D 87.273 55 4 3 1 52 46818223 46818169 3.290000e-05 60.2
41 TraesCS1D01G386900 chr6D 90.909 44 2 2 1 44 60523546 60523505 1.180000e-04 58.4
42 TraesCS1D01G386900 chr4B 93.814 388 24 0 29 416 5775394 5775781 4.400000e-163 584.0
43 TraesCS1D01G386900 chr6A 91.189 227 20 0 410 636 219555281 219555507 2.960000e-80 309.0
44 TraesCS1D01G386900 chr7A 89.167 240 24 2 406 643 143353807 143353568 6.410000e-77 298.0
45 TraesCS1D01G386900 chrUn 95.122 41 1 1 1 41 108290491 108290530 2.550000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G386900 chr1D 459816628 459819686 3058 True 5650 5650 100.0000 1 3059 1 chr1D.!!$R2 3058
1 TraesCS1D01G386900 chr1D 410495449 410496649 1200 False 1144 1144 83.9480 975 2188 1 chr1D.!!$F1 1213
2 TraesCS1D01G386900 chr1D 462358078 462359238 1160 True 1140 1140 84.5050 1017 2188 1 chr1D.!!$R4 1171
3 TraesCS1D01G386900 chr1D 462312472 462312978 506 True 568 568 86.8220 1674 2188 1 chr1D.!!$R3 514
4 TraesCS1D01G386900 chr1B 631824443 631826861 2418 False 1476 1744 92.4450 694 3059 2 chr1B.!!$F4 2365
5 TraesCS1D01G386900 chr1B 637387626 637388663 1037 True 1184 1184 87.2260 1141 2188 1 chr1B.!!$R1 1047
6 TraesCS1D01G386900 chr1B 637477466 637478371 905 True 1157 1157 89.6820 1279 2188 1 chr1B.!!$R2 909
7 TraesCS1D01G386900 chr1B 641683522 641684233 711 False 989 989 91.5860 2335 3059 1 chr1B.!!$F2 724
8 TraesCS1D01G386900 chr1B 553138388 553142402 4014 False 669 1166 87.1855 975 2187 2 chr1B.!!$F3 1212
9 TraesCS1D01G386900 chr1A 506541024 506542223 1199 False 1177 1177 84.4260 975 2188 1 chr1A.!!$F1 1213
10 TraesCS1D01G386900 chr5A 663617393 663618135 742 False 1031 1031 91.7900 2320 3059 1 chr5A.!!$F1 739
11 TraesCS1D01G386900 chr4D 483530290 483530810 520 False 667 667 89.8470 2320 2838 1 chr4D.!!$F1 518
12 TraesCS1D01G386900 chr4D 483560162 483560682 520 False 640 640 88.9310 2320 2838 1 chr4D.!!$F2 518
13 TraesCS1D01G386900 chr3B 27035837 27036746 909 False 614 614 79.0160 1172 2078 1 chr3B.!!$F1 906
14 TraesCS1D01G386900 chr3A 16889483 16890392 909 False 608 608 78.9070 1172 2078 1 chr3A.!!$F1 906
15 TraesCS1D01G386900 chr3A 19521087 19521798 711 False 514 514 80.0280 2345 3059 1 chr3A.!!$F2 714


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
569 570 0.033503 TCAGGTGGTCTCGAGCCATA 60.034 55.0 24.81 12.59 38.4 2.74 F
617 618 0.033699 GGAAGCTGAAGGAGGGCAAT 60.034 55.0 0.00 0.00 0.0 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1492 1547 0.039978 CCGAGACGATTCATCCTCCG 60.040 60.0 0.0 0.0 0.0 4.63 R
2068 2124 0.095245 CGCCGTTGTAGATTGTGCTG 59.905 55.0 0.0 0.0 0.0 4.41 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.575783 TTTTAAAATTATGCTACGATTCCCAAC 57.424 29.630 0.00 0.00 0.00 3.77
27 28 6.767524 AAAATTATGCTACGATTCCCAACA 57.232 33.333 0.00 0.00 0.00 3.33
28 29 5.751243 AATTATGCTACGATTCCCAACAC 57.249 39.130 0.00 0.00 0.00 3.32
29 30 2.779755 ATGCTACGATTCCCAACACA 57.220 45.000 0.00 0.00 0.00 3.72
30 31 2.552599 TGCTACGATTCCCAACACAA 57.447 45.000 0.00 0.00 0.00 3.33
31 32 2.852449 TGCTACGATTCCCAACACAAA 58.148 42.857 0.00 0.00 0.00 2.83
32 33 2.550606 TGCTACGATTCCCAACACAAAC 59.449 45.455 0.00 0.00 0.00 2.93
33 34 2.095415 GCTACGATTCCCAACACAAACC 60.095 50.000 0.00 0.00 0.00 3.27
34 35 0.948678 ACGATTCCCAACACAAACCG 59.051 50.000 0.00 0.00 0.00 4.44
35 36 1.231221 CGATTCCCAACACAAACCGA 58.769 50.000 0.00 0.00 0.00 4.69
36 37 1.069500 CGATTCCCAACACAAACCGAC 60.069 52.381 0.00 0.00 0.00 4.79
37 38 1.268625 GATTCCCAACACAAACCGACC 59.731 52.381 0.00 0.00 0.00 4.79
38 39 0.034380 TTCCCAACACAAACCGACCA 60.034 50.000 0.00 0.00 0.00 4.02
39 40 0.748729 TCCCAACACAAACCGACCAC 60.749 55.000 0.00 0.00 0.00 4.16
40 41 1.730451 CCCAACACAAACCGACCACC 61.730 60.000 0.00 0.00 0.00 4.61
41 42 1.032657 CCAACACAAACCGACCACCA 61.033 55.000 0.00 0.00 0.00 4.17
42 43 0.099791 CAACACAAACCGACCACCAC 59.900 55.000 0.00 0.00 0.00 4.16
43 44 1.033202 AACACAAACCGACCACCACC 61.033 55.000 0.00 0.00 0.00 4.61
44 45 2.190841 CACAAACCGACCACCACCC 61.191 63.158 0.00 0.00 0.00 4.61
45 46 2.193517 CAAACCGACCACCACCCA 59.806 61.111 0.00 0.00 0.00 4.51
46 47 1.896660 CAAACCGACCACCACCCAG 60.897 63.158 0.00 0.00 0.00 4.45
47 48 3.785122 AAACCGACCACCACCCAGC 62.785 63.158 0.00 0.00 0.00 4.85
61 62 4.012895 CAGCGCCAACACGGACAC 62.013 66.667 2.29 0.00 36.56 3.67
64 65 2.962786 CGCCAACACGGACACGAA 60.963 61.111 0.00 0.00 44.60 3.85
65 66 2.935955 GCCAACACGGACACGAAG 59.064 61.111 0.00 0.00 44.60 3.79
66 67 2.935955 CCAACACGGACACGAAGC 59.064 61.111 0.00 0.00 44.60 3.86
67 68 1.594293 CCAACACGGACACGAAGCT 60.594 57.895 0.00 0.00 44.60 3.74
68 69 1.157870 CCAACACGGACACGAAGCTT 61.158 55.000 0.00 0.00 44.60 3.74
69 70 0.232303 CAACACGGACACGAAGCTTC 59.768 55.000 16.84 16.84 44.60 3.86
70 71 0.878961 AACACGGACACGAAGCTTCC 60.879 55.000 20.62 6.08 44.60 3.46
71 72 2.027625 CACGGACACGAAGCTTCCC 61.028 63.158 20.62 14.22 44.60 3.97
72 73 2.342279 CGGACACGAAGCTTCCCA 59.658 61.111 20.62 0.00 44.60 4.37
73 74 2.027625 CGGACACGAAGCTTCCCAC 61.028 63.158 20.62 9.47 44.60 4.61
74 75 2.027625 GGACACGAAGCTTCCCACG 61.028 63.158 20.62 12.05 0.00 4.94
75 76 2.665185 ACACGAAGCTTCCCACGC 60.665 61.111 20.62 0.00 0.00 5.34
76 77 2.357517 CACGAAGCTTCCCACGCT 60.358 61.111 20.62 0.00 39.94 5.07
77 78 2.357517 ACGAAGCTTCCCACGCTG 60.358 61.111 20.62 7.26 37.87 5.18
78 79 2.357517 CGAAGCTTCCCACGCTGT 60.358 61.111 20.62 0.00 37.87 4.40
79 80 2.383527 CGAAGCTTCCCACGCTGTC 61.384 63.158 20.62 0.00 37.87 3.51
80 81 1.004440 GAAGCTTCCCACGCTGTCT 60.004 57.895 15.97 0.00 37.87 3.41
81 82 1.004440 AAGCTTCCCACGCTGTCTC 60.004 57.895 0.00 0.00 37.87 3.36
82 83 1.758440 AAGCTTCCCACGCTGTCTCA 61.758 55.000 0.00 0.00 37.87 3.27
83 84 2.029844 GCTTCCCACGCTGTCTCAC 61.030 63.158 0.00 0.00 0.00 3.51
84 85 1.374758 CTTCCCACGCTGTCTCACC 60.375 63.158 0.00 0.00 0.00 4.02
85 86 2.099652 CTTCCCACGCTGTCTCACCA 62.100 60.000 0.00 0.00 0.00 4.17
86 87 2.357517 CCCACGCTGTCTCACCAC 60.358 66.667 0.00 0.00 0.00 4.16
87 88 2.421314 CCACGCTGTCTCACCACA 59.579 61.111 0.00 0.00 0.00 4.17
88 89 1.665916 CCACGCTGTCTCACCACAG 60.666 63.158 0.00 0.00 45.82 3.66
92 93 4.368391 CTGTCTCACCACAGCACC 57.632 61.111 0.00 0.00 37.58 5.01
93 94 1.665916 CTGTCTCACCACAGCACCG 60.666 63.158 0.00 0.00 37.58 4.94
94 95 3.044305 GTCTCACCACAGCACCGC 61.044 66.667 0.00 0.00 0.00 5.68
95 96 4.662961 TCTCACCACAGCACCGCG 62.663 66.667 0.00 0.00 0.00 6.46
96 97 4.662961 CTCACCACAGCACCGCGA 62.663 66.667 8.23 0.00 0.00 5.87
97 98 4.228567 TCACCACAGCACCGCGAA 62.229 61.111 8.23 0.00 0.00 4.70
98 99 3.716006 CACCACAGCACCGCGAAG 61.716 66.667 8.23 0.00 0.00 3.79
99 100 3.923864 ACCACAGCACCGCGAAGA 61.924 61.111 8.23 0.00 0.00 2.87
100 101 2.434884 CCACAGCACCGCGAAGAT 60.435 61.111 8.23 0.00 0.00 2.40
101 102 2.743752 CCACAGCACCGCGAAGATG 61.744 63.158 8.23 11.39 0.00 2.90
102 103 2.434884 ACAGCACCGCGAAGATGG 60.435 61.111 8.23 0.00 0.00 3.51
103 104 3.869272 CAGCACCGCGAAGATGGC 61.869 66.667 8.23 1.17 0.00 4.40
106 107 3.197790 CACCGCGAAGATGGCCTG 61.198 66.667 8.23 0.00 0.00 4.85
109 110 3.869272 CGCGAAGATGGCCTGCAC 61.869 66.667 0.00 0.00 0.00 4.57
110 111 2.747460 GCGAAGATGGCCTGCACA 60.747 61.111 3.32 0.00 0.00 4.57
111 112 2.334946 GCGAAGATGGCCTGCACAA 61.335 57.895 3.32 0.00 0.00 3.33
112 113 1.503542 CGAAGATGGCCTGCACAAC 59.496 57.895 3.32 0.00 0.00 3.32
113 114 1.503542 GAAGATGGCCTGCACAACG 59.496 57.895 3.32 0.00 0.00 4.10
114 115 0.955428 GAAGATGGCCTGCACAACGA 60.955 55.000 3.32 0.00 0.00 3.85
115 116 0.537143 AAGATGGCCTGCACAACGAA 60.537 50.000 3.32 0.00 0.00 3.85
116 117 0.957395 AGATGGCCTGCACAACGAAG 60.957 55.000 3.32 0.00 0.00 3.79
117 118 0.955428 GATGGCCTGCACAACGAAGA 60.955 55.000 3.32 0.00 0.00 2.87
118 119 0.537143 ATGGCCTGCACAACGAAGAA 60.537 50.000 3.32 0.00 0.00 2.52
119 120 1.165907 TGGCCTGCACAACGAAGAAG 61.166 55.000 3.32 0.00 0.00 2.85
120 121 0.884704 GGCCTGCACAACGAAGAAGA 60.885 55.000 0.00 0.00 0.00 2.87
121 122 0.514691 GCCTGCACAACGAAGAAGAG 59.485 55.000 0.00 0.00 0.00 2.85
122 123 1.151668 CCTGCACAACGAAGAAGAGG 58.848 55.000 0.00 0.00 0.00 3.69
123 124 1.270305 CCTGCACAACGAAGAAGAGGA 60.270 52.381 0.00 0.00 0.00 3.71
124 125 2.064762 CTGCACAACGAAGAAGAGGAG 58.935 52.381 0.00 0.00 0.00 3.69
125 126 0.793250 GCACAACGAAGAAGAGGAGC 59.207 55.000 0.00 0.00 0.00 4.70
126 127 1.433534 CACAACGAAGAAGAGGAGCC 58.566 55.000 0.00 0.00 0.00 4.70
127 128 0.038159 ACAACGAAGAAGAGGAGCCG 60.038 55.000 0.00 0.00 0.00 5.52
128 129 0.737715 CAACGAAGAAGAGGAGCCGG 60.738 60.000 0.00 0.00 0.00 6.13
129 130 1.889530 AACGAAGAAGAGGAGCCGGG 61.890 60.000 2.18 0.00 0.00 5.73
130 131 2.052690 CGAAGAAGAGGAGCCGGGA 61.053 63.158 2.18 0.00 0.00 5.14
131 132 1.518302 GAAGAAGAGGAGCCGGGAC 59.482 63.158 2.18 0.00 0.00 4.46
132 133 0.973496 GAAGAAGAGGAGCCGGGACT 60.973 60.000 2.18 0.00 0.00 3.85
133 134 0.335361 AAGAAGAGGAGCCGGGACTA 59.665 55.000 2.18 0.00 0.00 2.59
134 135 0.106419 AGAAGAGGAGCCGGGACTAG 60.106 60.000 2.18 0.00 0.00 2.57
135 136 0.396001 GAAGAGGAGCCGGGACTAGT 60.396 60.000 2.18 0.00 0.00 2.57
136 137 0.684805 AAGAGGAGCCGGGACTAGTG 60.685 60.000 2.18 0.00 0.00 2.74
137 138 2.760385 AGGAGCCGGGACTAGTGC 60.760 66.667 5.70 5.70 0.00 4.40
138 139 3.075005 GGAGCCGGGACTAGTGCA 61.075 66.667 16.81 0.00 0.00 4.57
139 140 2.496817 GAGCCGGGACTAGTGCAG 59.503 66.667 16.81 12.15 0.00 4.41
140 141 3.724914 GAGCCGGGACTAGTGCAGC 62.725 68.421 16.81 17.15 0.00 5.25
141 142 4.082523 GCCGGGACTAGTGCAGCA 62.083 66.667 16.81 0.00 0.00 4.41
142 143 2.185350 CCGGGACTAGTGCAGCAG 59.815 66.667 16.81 4.31 0.00 4.24
143 144 2.510238 CGGGACTAGTGCAGCAGC 60.510 66.667 16.81 0.00 42.57 5.25
155 156 3.770040 AGCAGCACCGTCGGCATA 61.770 61.111 12.28 0.00 0.00 3.14
156 157 3.564027 GCAGCACCGTCGGCATAC 61.564 66.667 12.28 0.00 0.00 2.39
157 158 3.254654 CAGCACCGTCGGCATACG 61.255 66.667 12.28 3.29 46.11 3.06
163 164 4.280494 CGTCGGCATACGGGAGGG 62.280 72.222 2.38 0.00 44.45 4.30
164 165 4.603946 GTCGGCATACGGGAGGGC 62.604 72.222 0.00 0.00 44.45 5.19
182 183 4.016706 CCCACCTCCACCGTCCAC 62.017 72.222 0.00 0.00 0.00 4.02
183 184 4.373116 CCACCTCCACCGTCCACG 62.373 72.222 0.00 0.00 39.44 4.94
184 185 3.299977 CACCTCCACCGTCCACGA 61.300 66.667 0.00 0.00 43.02 4.35
185 186 2.283676 ACCTCCACCGTCCACGAT 60.284 61.111 0.00 0.00 43.02 3.73
186 187 2.184322 CCTCCACCGTCCACGATG 59.816 66.667 0.00 0.00 43.02 3.84
192 193 2.106332 CCGTCCACGATGGTAGCC 59.894 66.667 0.00 0.00 43.02 3.93
193 194 2.278596 CGTCCACGATGGTAGCCG 60.279 66.667 0.00 0.00 43.02 5.52
194 195 2.767445 CGTCCACGATGGTAGCCGA 61.767 63.158 0.00 0.00 43.02 5.54
195 196 1.226888 GTCCACGATGGTAGCCGAC 60.227 63.158 0.00 0.00 39.03 4.79
207 208 4.944372 GCCGACCGGACGCCATAG 62.944 72.222 21.02 7.93 37.50 2.23
208 209 4.944372 CCGACCGGACGCCATAGC 62.944 72.222 21.02 0.00 37.50 2.97
209 210 4.201679 CGACCGGACGCCATAGCA 62.202 66.667 14.33 0.00 39.83 3.49
210 211 2.279517 GACCGGACGCCATAGCAG 60.280 66.667 9.46 0.00 39.83 4.24
211 212 3.792053 GACCGGACGCCATAGCAGG 62.792 68.421 9.46 0.00 39.83 4.85
212 213 3.536917 CCGGACGCCATAGCAGGA 61.537 66.667 0.00 0.00 39.83 3.86
213 214 2.028190 CGGACGCCATAGCAGGAG 59.972 66.667 0.00 0.00 39.83 3.69
214 215 2.280457 GGACGCCATAGCAGGAGC 60.280 66.667 0.00 0.00 39.83 4.70
215 216 2.280457 GACGCCATAGCAGGAGCC 60.280 66.667 0.00 0.00 43.56 4.70
216 217 2.765807 ACGCCATAGCAGGAGCCT 60.766 61.111 0.00 0.00 43.56 4.58
217 218 1.457643 ACGCCATAGCAGGAGCCTA 60.458 57.895 0.00 0.00 43.56 3.93
218 219 1.005630 CGCCATAGCAGGAGCCTAC 60.006 63.158 0.00 0.00 43.56 3.18
219 220 1.373059 GCCATAGCAGGAGCCTACC 59.627 63.158 0.00 0.00 43.56 3.18
220 221 1.668294 CCATAGCAGGAGCCTACCG 59.332 63.158 0.00 0.00 43.56 4.02
221 222 1.668294 CATAGCAGGAGCCTACCGG 59.332 63.158 0.00 0.00 43.56 5.28
222 223 1.534235 ATAGCAGGAGCCTACCGGG 60.534 63.158 6.32 0.00 43.56 5.73
266 267 3.646715 CCCTCAAAGGCCCGGACA 61.647 66.667 0.73 0.00 32.73 4.02
267 268 2.045926 CCTCAAAGGCCCGGACAG 60.046 66.667 0.73 0.00 0.00 3.51
268 269 2.747855 CTCAAAGGCCCGGACAGC 60.748 66.667 0.73 0.00 0.00 4.40
269 270 3.249189 TCAAAGGCCCGGACAGCT 61.249 61.111 0.73 0.00 0.00 4.24
270 271 2.747855 CAAAGGCCCGGACAGCTC 60.748 66.667 0.73 0.00 0.00 4.09
271 272 4.035102 AAAGGCCCGGACAGCTCC 62.035 66.667 0.73 0.00 0.00 4.70
278 279 4.821589 CGGACAGCTCCCGCCTTC 62.822 72.222 10.70 0.00 40.54 3.46
279 280 3.706373 GGACAGCTCCCGCCTTCA 61.706 66.667 0.00 0.00 36.60 3.02
280 281 2.435059 GACAGCTCCCGCCTTCAC 60.435 66.667 0.00 0.00 36.60 3.18
281 282 4.379243 ACAGCTCCCGCCTTCACG 62.379 66.667 0.00 0.00 36.60 4.35
290 291 4.099170 GCCTTCACGCAGCAGCTG 62.099 66.667 18.93 18.93 39.10 4.24
291 292 3.429141 CCTTCACGCAGCAGCTGG 61.429 66.667 24.13 15.75 39.10 4.85
292 293 4.099170 CTTCACGCAGCAGCTGGC 62.099 66.667 24.13 14.63 45.30 4.85
316 317 4.742201 CCGGCGTCACTGTCCCAG 62.742 72.222 6.01 0.00 37.52 4.45
317 318 3.991051 CGGCGTCACTGTCCCAGT 61.991 66.667 0.00 0.00 46.51 4.00
318 319 2.048127 GGCGTCACTGTCCCAGTC 60.048 66.667 0.00 0.00 43.43 3.51
319 320 2.048127 GCGTCACTGTCCCAGTCC 60.048 66.667 0.00 0.00 43.43 3.85
320 321 2.867855 GCGTCACTGTCCCAGTCCA 61.868 63.158 0.00 0.00 43.43 4.02
321 322 1.745890 CGTCACTGTCCCAGTCCAA 59.254 57.895 0.00 0.00 43.43 3.53
322 323 0.319900 CGTCACTGTCCCAGTCCAAG 60.320 60.000 0.00 0.00 43.43 3.61
323 324 0.603975 GTCACTGTCCCAGTCCAAGC 60.604 60.000 0.00 0.00 43.43 4.01
324 325 1.302832 CACTGTCCCAGTCCAAGCC 60.303 63.158 0.00 0.00 43.43 4.35
325 326 2.046892 CTGTCCCAGTCCAAGCCG 60.047 66.667 0.00 0.00 0.00 5.52
326 327 4.329545 TGTCCCAGTCCAAGCCGC 62.330 66.667 0.00 0.00 0.00 6.53
327 328 4.021925 GTCCCAGTCCAAGCCGCT 62.022 66.667 0.00 0.00 0.00 5.52
328 329 3.706373 TCCCAGTCCAAGCCGCTC 61.706 66.667 0.00 0.00 0.00 5.03
329 330 4.785453 CCCAGTCCAAGCCGCTCC 62.785 72.222 0.00 0.00 0.00 4.70
330 331 4.785453 CCAGTCCAAGCCGCTCCC 62.785 72.222 0.00 0.00 0.00 4.30
331 332 4.785453 CAGTCCAAGCCGCTCCCC 62.785 72.222 0.00 0.00 0.00 4.81
333 334 4.785453 GTCCAAGCCGCTCCCCTG 62.785 72.222 0.00 0.00 0.00 4.45
342 343 3.424105 GCTCCCCTGCCTTCCCAT 61.424 66.667 0.00 0.00 0.00 4.00
343 344 2.078665 GCTCCCCTGCCTTCCCATA 61.079 63.158 0.00 0.00 0.00 2.74
344 345 1.839894 CTCCCCTGCCTTCCCATAC 59.160 63.158 0.00 0.00 0.00 2.39
345 346 2.044806 CTCCCCTGCCTTCCCATACG 62.045 65.000 0.00 0.00 0.00 3.06
346 347 2.510906 CCCTGCCTTCCCATACGG 59.489 66.667 0.00 0.00 0.00 4.02
347 348 2.070039 CCCTGCCTTCCCATACGGA 61.070 63.158 0.00 0.00 39.68 4.69
348 349 1.447643 CCTGCCTTCCCATACGGAG 59.552 63.158 0.00 0.00 43.39 4.63
349 350 1.447643 CTGCCTTCCCATACGGAGG 59.552 63.158 0.00 0.00 43.39 4.30
352 353 2.421739 CTTCCCATACGGAGGGCG 59.578 66.667 0.00 0.00 46.36 6.13
353 354 2.364579 TTCCCATACGGAGGGCGT 60.365 61.111 0.00 0.00 46.36 5.68
354 355 2.365095 CTTCCCATACGGAGGGCGTC 62.365 65.000 0.00 0.00 46.36 5.19
355 356 4.280494 CCCATACGGAGGGCGTCG 62.280 72.222 0.00 0.00 39.96 5.12
356 357 4.944372 CCATACGGAGGGCGTCGC 62.944 72.222 9.22 9.22 0.00 5.19
375 376 4.773117 GTCGCACCGGAGTCGACC 62.773 72.222 25.93 14.88 44.62 4.79
381 382 4.796231 CCGGAGTCGACCCGCAAG 62.796 72.222 29.05 17.63 45.24 4.01
402 403 2.266689 CCAAACGGGACCCTACGG 59.733 66.667 9.41 0.00 40.01 4.02
412 413 2.445845 CCCTACGGGCCCAGATCA 60.446 66.667 24.92 0.00 35.35 2.92
413 414 2.511452 CCCTACGGGCCCAGATCAG 61.511 68.421 24.92 10.26 35.35 2.90
414 415 2.511452 CCTACGGGCCCAGATCAGG 61.511 68.421 24.92 15.63 0.00 3.86
421 422 3.652687 CCCAGATCAGGGGGTCTG 58.347 66.667 15.46 0.00 45.60 3.51
438 439 4.273318 GGTCTGAAATCCCCATATATGGC 58.727 47.826 24.27 11.27 46.70 4.40
439 440 4.018050 GGTCTGAAATCCCCATATATGGCT 60.018 45.833 24.27 9.59 46.70 4.75
440 441 5.517299 GGTCTGAAATCCCCATATATGGCTT 60.517 44.000 24.27 14.42 46.70 4.35
441 442 5.416952 GTCTGAAATCCCCATATATGGCTTG 59.583 44.000 24.27 15.00 46.70 4.01
442 443 4.088634 TGAAATCCCCATATATGGCTTGC 58.911 43.478 24.27 15.70 46.70 4.01
443 444 3.831642 AATCCCCATATATGGCTTGCA 57.168 42.857 24.27 7.37 46.70 4.08
444 445 2.584835 TCCCCATATATGGCTTGCAC 57.415 50.000 24.27 0.00 46.70 4.57
445 446 1.075374 TCCCCATATATGGCTTGCACC 59.925 52.381 24.27 0.00 46.70 5.01
446 447 1.203038 CCCCATATATGGCTTGCACCA 60.203 52.381 24.27 0.00 46.70 4.17
447 448 2.596346 CCCATATATGGCTTGCACCAA 58.404 47.619 24.27 0.00 46.70 3.67
448 449 2.559668 CCCATATATGGCTTGCACCAAG 59.440 50.000 24.27 4.80 46.70 3.61
449 450 3.489355 CCATATATGGCTTGCACCAAGA 58.511 45.455 18.77 0.00 44.65 3.02
450 451 3.890756 CCATATATGGCTTGCACCAAGAA 59.109 43.478 18.77 0.00 44.65 2.52
451 452 4.261741 CCATATATGGCTTGCACCAAGAAC 60.262 45.833 18.77 2.00 44.65 3.01
452 453 1.544724 TATGGCTTGCACCAAGAACC 58.455 50.000 9.01 2.59 44.65 3.62
453 454 0.178953 ATGGCTTGCACCAAGAACCT 60.179 50.000 9.01 0.00 44.65 3.50
454 455 0.476338 TGGCTTGCACCAAGAACCTA 59.524 50.000 9.01 0.00 43.42 3.08
455 456 1.075374 TGGCTTGCACCAAGAACCTAT 59.925 47.619 9.01 0.00 43.42 2.57
456 457 1.745653 GGCTTGCACCAAGAACCTATC 59.254 52.381 9.01 0.00 43.42 2.08
457 458 2.436417 GCTTGCACCAAGAACCTATCA 58.564 47.619 9.01 0.00 43.42 2.15
458 459 2.819608 GCTTGCACCAAGAACCTATCAA 59.180 45.455 9.01 0.00 43.42 2.57
459 460 3.255642 GCTTGCACCAAGAACCTATCAAA 59.744 43.478 9.01 0.00 43.42 2.69
460 461 4.616835 GCTTGCACCAAGAACCTATCAAAG 60.617 45.833 9.01 0.00 43.42 2.77
461 462 2.819608 TGCACCAAGAACCTATCAAAGC 59.180 45.455 0.00 0.00 0.00 3.51
462 463 2.164422 GCACCAAGAACCTATCAAAGCC 59.836 50.000 0.00 0.00 0.00 4.35
463 464 2.420022 CACCAAGAACCTATCAAAGCCG 59.580 50.000 0.00 0.00 0.00 5.52
464 465 2.304761 ACCAAGAACCTATCAAAGCCGA 59.695 45.455 0.00 0.00 0.00 5.54
465 466 3.244770 ACCAAGAACCTATCAAAGCCGAA 60.245 43.478 0.00 0.00 0.00 4.30
466 467 3.375299 CCAAGAACCTATCAAAGCCGAAG 59.625 47.826 0.00 0.00 0.00 3.79
467 468 4.253685 CAAGAACCTATCAAAGCCGAAGA 58.746 43.478 0.00 0.00 0.00 2.87
468 469 4.130286 AGAACCTATCAAAGCCGAAGAG 57.870 45.455 0.00 0.00 0.00 2.85
469 470 2.990066 ACCTATCAAAGCCGAAGAGG 57.010 50.000 0.00 0.00 44.97 3.69
470 471 2.467880 ACCTATCAAAGCCGAAGAGGA 58.532 47.619 0.00 0.00 45.00 3.71
471 472 2.838202 ACCTATCAAAGCCGAAGAGGAA 59.162 45.455 0.00 0.00 45.00 3.36
472 473 3.198872 CCTATCAAAGCCGAAGAGGAAC 58.801 50.000 0.00 0.00 45.00 3.62
473 474 1.726853 ATCAAAGCCGAAGAGGAACG 58.273 50.000 0.00 0.00 45.00 3.95
474 475 0.391597 TCAAAGCCGAAGAGGAACGT 59.608 50.000 0.00 0.00 45.00 3.99
475 476 0.512952 CAAAGCCGAAGAGGAACGTG 59.487 55.000 0.00 0.00 45.00 4.49
476 477 1.228657 AAAGCCGAAGAGGAACGTGC 61.229 55.000 0.00 0.00 45.00 5.34
477 478 3.479269 GCCGAAGAGGAACGTGCG 61.479 66.667 0.00 0.00 45.00 5.34
478 479 2.257371 CCGAAGAGGAACGTGCGA 59.743 61.111 0.00 0.00 45.00 5.10
479 480 2.087009 CCGAAGAGGAACGTGCGAC 61.087 63.158 0.00 0.00 45.00 5.19
480 481 1.371267 CGAAGAGGAACGTGCGACA 60.371 57.895 0.00 0.00 0.00 4.35
481 482 1.606350 CGAAGAGGAACGTGCGACAC 61.606 60.000 0.00 0.00 0.00 3.67
482 483 1.282930 GAAGAGGAACGTGCGACACC 61.283 60.000 0.00 0.00 0.00 4.16
483 484 2.023414 AAGAGGAACGTGCGACACCA 62.023 55.000 0.00 0.00 0.00 4.17
484 485 2.279918 AGGAACGTGCGACACCAC 60.280 61.111 0.00 0.00 0.00 4.16
485 486 3.343421 GGAACGTGCGACACCACC 61.343 66.667 0.00 2.99 32.10 4.61
486 487 2.279918 GAACGTGCGACACCACCT 60.280 61.111 0.00 0.00 32.10 4.00
487 488 2.587753 AACGTGCGACACCACCTG 60.588 61.111 0.00 0.00 32.10 4.00
491 492 4.927782 TGCGACACCACCTGCACC 62.928 66.667 0.00 0.00 31.31 5.01
515 516 3.987404 CCCCTCGGCAAAGTTCAG 58.013 61.111 0.00 0.00 0.00 3.02
516 517 1.073199 CCCCTCGGCAAAGTTCAGT 59.927 57.895 0.00 0.00 0.00 3.41
517 518 1.237285 CCCCTCGGCAAAGTTCAGTG 61.237 60.000 0.00 0.00 0.00 3.66
518 519 1.576421 CCTCGGCAAAGTTCAGTGC 59.424 57.895 0.00 0.00 40.14 4.40
519 520 1.165907 CCTCGGCAAAGTTCAGTGCA 61.166 55.000 0.77 0.00 42.74 4.57
520 521 0.877071 CTCGGCAAAGTTCAGTGCAT 59.123 50.000 0.00 0.00 42.74 3.96
521 522 0.874390 TCGGCAAAGTTCAGTGCATC 59.126 50.000 0.00 0.00 42.74 3.91
522 523 0.592637 CGGCAAAGTTCAGTGCATCA 59.407 50.000 0.00 0.00 42.74 3.07
523 524 1.200716 CGGCAAAGTTCAGTGCATCAT 59.799 47.619 0.00 0.00 42.74 2.45
524 525 2.730090 CGGCAAAGTTCAGTGCATCATC 60.730 50.000 0.00 0.00 42.74 2.92
525 526 2.416431 GGCAAAGTTCAGTGCATCATCC 60.416 50.000 0.00 0.00 42.74 3.51
526 527 2.730090 GCAAAGTTCAGTGCATCATCCG 60.730 50.000 0.00 0.00 40.58 4.18
527 528 2.479566 AAGTTCAGTGCATCATCCGT 57.520 45.000 0.00 0.00 0.00 4.69
528 529 2.015736 AGTTCAGTGCATCATCCGTC 57.984 50.000 0.00 0.00 0.00 4.79
529 530 0.647410 GTTCAGTGCATCATCCGTCG 59.353 55.000 0.00 0.00 0.00 5.12
530 531 0.246360 TTCAGTGCATCATCCGTCGT 59.754 50.000 0.00 0.00 0.00 4.34
531 532 0.458370 TCAGTGCATCATCCGTCGTG 60.458 55.000 0.00 0.00 0.00 4.35
532 533 0.458370 CAGTGCATCATCCGTCGTGA 60.458 55.000 0.00 0.00 0.00 4.35
533 534 0.461548 AGTGCATCATCCGTCGTGAT 59.538 50.000 0.00 0.00 36.79 3.06
534 535 1.134699 AGTGCATCATCCGTCGTGATT 60.135 47.619 0.00 0.00 34.21 2.57
535 536 1.665679 GTGCATCATCCGTCGTGATTT 59.334 47.619 0.00 0.00 34.21 2.17
536 537 2.095853 GTGCATCATCCGTCGTGATTTT 59.904 45.455 0.00 0.00 34.21 1.82
537 538 2.746904 TGCATCATCCGTCGTGATTTTT 59.253 40.909 0.00 0.00 34.21 1.94
538 539 3.935828 TGCATCATCCGTCGTGATTTTTA 59.064 39.130 0.00 0.00 34.21 1.52
539 540 4.201773 TGCATCATCCGTCGTGATTTTTAC 60.202 41.667 0.00 0.00 34.21 2.01
540 541 4.201773 GCATCATCCGTCGTGATTTTTACA 60.202 41.667 0.00 0.00 34.21 2.41
541 542 5.492854 CATCATCCGTCGTGATTTTTACAG 58.507 41.667 0.00 0.00 34.21 2.74
542 543 4.562082 TCATCCGTCGTGATTTTTACAGT 58.438 39.130 0.00 0.00 0.00 3.55
543 544 5.712004 TCATCCGTCGTGATTTTTACAGTA 58.288 37.500 0.00 0.00 0.00 2.74
544 545 5.803461 TCATCCGTCGTGATTTTTACAGTAG 59.197 40.000 0.00 0.00 0.00 2.57
545 546 3.922240 TCCGTCGTGATTTTTACAGTAGC 59.078 43.478 0.00 0.00 0.00 3.58
546 547 3.676172 CCGTCGTGATTTTTACAGTAGCA 59.324 43.478 0.00 0.00 0.00 3.49
547 548 4.328983 CCGTCGTGATTTTTACAGTAGCAT 59.671 41.667 0.00 0.00 0.00 3.79
548 549 5.481472 CGTCGTGATTTTTACAGTAGCATC 58.519 41.667 0.00 0.00 0.00 3.91
549 550 5.061684 CGTCGTGATTTTTACAGTAGCATCA 59.938 40.000 0.00 0.00 0.00 3.07
550 551 6.237835 CGTCGTGATTTTTACAGTAGCATCAT 60.238 38.462 0.00 0.00 0.00 2.45
551 552 7.119997 GTCGTGATTTTTACAGTAGCATCATC 58.880 38.462 0.00 0.00 0.00 2.92
552 553 6.816140 TCGTGATTTTTACAGTAGCATCATCA 59.184 34.615 0.00 0.00 0.00 3.07
553 554 7.010460 TCGTGATTTTTACAGTAGCATCATCAG 59.990 37.037 0.00 0.00 0.00 2.90
554 555 7.412853 GTGATTTTTACAGTAGCATCATCAGG 58.587 38.462 0.00 0.00 0.00 3.86
555 556 7.066284 GTGATTTTTACAGTAGCATCATCAGGT 59.934 37.037 0.00 0.00 0.00 4.00
556 557 6.741992 TTTTTACAGTAGCATCATCAGGTG 57.258 37.500 0.00 0.00 0.00 4.00
557 558 2.996249 ACAGTAGCATCATCAGGTGG 57.004 50.000 0.00 0.00 0.00 4.61
558 559 2.191400 ACAGTAGCATCATCAGGTGGT 58.809 47.619 0.00 0.00 0.00 4.16
559 560 2.169352 ACAGTAGCATCATCAGGTGGTC 59.831 50.000 0.00 0.00 0.00 4.02
560 561 2.433604 CAGTAGCATCATCAGGTGGTCT 59.566 50.000 0.00 0.00 0.00 3.85
561 562 2.697751 AGTAGCATCATCAGGTGGTCTC 59.302 50.000 0.00 0.00 0.00 3.36
562 563 0.463204 AGCATCATCAGGTGGTCTCG 59.537 55.000 0.00 0.00 0.00 4.04
563 564 0.461548 GCATCATCAGGTGGTCTCGA 59.538 55.000 0.00 0.00 0.00 4.04
564 565 1.537776 GCATCATCAGGTGGTCTCGAG 60.538 57.143 5.93 5.93 0.00 4.04
565 566 0.749649 ATCATCAGGTGGTCTCGAGC 59.250 55.000 7.81 2.69 0.00 5.03
566 567 1.142748 CATCAGGTGGTCTCGAGCC 59.857 63.158 7.81 13.02 0.00 4.70
567 568 1.305297 ATCAGGTGGTCTCGAGCCA 60.305 57.895 20.28 20.28 0.00 4.75
568 569 0.689080 ATCAGGTGGTCTCGAGCCAT 60.689 55.000 24.81 12.17 38.40 4.40
569 570 0.033503 TCAGGTGGTCTCGAGCCATA 60.034 55.000 24.81 12.59 38.40 2.74
570 571 0.824109 CAGGTGGTCTCGAGCCATAA 59.176 55.000 24.81 6.20 38.40 1.90
571 572 0.824759 AGGTGGTCTCGAGCCATAAC 59.175 55.000 24.81 18.96 38.40 1.89
572 573 0.179081 GGTGGTCTCGAGCCATAACC 60.179 60.000 24.81 18.97 38.40 2.85
573 574 0.535335 GTGGTCTCGAGCCATAACCA 59.465 55.000 24.81 20.99 38.40 3.67
574 575 0.824109 TGGTCTCGAGCCATAACCAG 59.176 55.000 20.28 0.00 35.15 4.00
575 576 0.105039 GGTCTCGAGCCATAACCAGG 59.895 60.000 17.62 0.00 0.00 4.45
576 577 0.824759 GTCTCGAGCCATAACCAGGT 59.175 55.000 7.81 0.00 0.00 4.00
577 578 2.029623 GTCTCGAGCCATAACCAGGTA 58.970 52.381 7.81 0.00 0.00 3.08
578 579 2.429610 GTCTCGAGCCATAACCAGGTAA 59.570 50.000 7.81 0.00 0.00 2.85
579 580 2.429610 TCTCGAGCCATAACCAGGTAAC 59.570 50.000 7.81 0.00 0.00 2.50
580 581 2.167693 CTCGAGCCATAACCAGGTAACA 59.832 50.000 0.00 0.00 41.41 2.41
581 582 2.769663 TCGAGCCATAACCAGGTAACAT 59.230 45.455 0.00 0.00 41.41 2.71
582 583 3.962063 TCGAGCCATAACCAGGTAACATA 59.038 43.478 0.00 0.00 41.41 2.29
583 584 4.038763 TCGAGCCATAACCAGGTAACATAG 59.961 45.833 0.00 0.00 41.41 2.23
584 585 4.065789 GAGCCATAACCAGGTAACATAGC 58.934 47.826 0.00 0.00 41.41 2.97
585 586 2.806244 GCCATAACCAGGTAACATAGCG 59.194 50.000 0.00 0.00 41.41 4.26
586 587 3.399330 CCATAACCAGGTAACATAGCGG 58.601 50.000 0.00 0.00 41.41 5.52
587 588 2.607631 TAACCAGGTAACATAGCGGC 57.392 50.000 0.00 0.00 41.41 6.53
588 589 0.909623 AACCAGGTAACATAGCGGCT 59.090 50.000 7.98 7.98 41.41 5.52
589 590 0.178068 ACCAGGTAACATAGCGGCTG 59.822 55.000 13.86 0.00 41.41 4.85
590 591 1.160329 CCAGGTAACATAGCGGCTGC 61.160 60.000 13.86 10.33 40.18 5.25
591 592 1.146263 AGGTAACATAGCGGCTGCC 59.854 57.895 15.55 9.11 40.70 4.85
592 593 1.146263 GGTAACATAGCGGCTGCCT 59.854 57.895 15.55 4.17 44.31 4.75
593 594 0.463833 GGTAACATAGCGGCTGCCTT 60.464 55.000 15.55 7.45 44.31 4.35
594 595 1.202604 GGTAACATAGCGGCTGCCTTA 60.203 52.381 15.55 9.55 44.31 2.69
595 596 1.865340 GTAACATAGCGGCTGCCTTAC 59.135 52.381 15.55 13.01 44.31 2.34
596 597 0.810031 AACATAGCGGCTGCCTTACG 60.810 55.000 15.55 4.27 44.31 3.18
614 615 2.124942 CGGAAGCTGAAGGAGGGC 60.125 66.667 0.00 0.00 0.00 5.19
615 616 2.959484 CGGAAGCTGAAGGAGGGCA 61.959 63.158 0.00 0.00 0.00 5.36
616 617 1.380302 GGAAGCTGAAGGAGGGCAA 59.620 57.895 0.00 0.00 0.00 4.52
617 618 0.033699 GGAAGCTGAAGGAGGGCAAT 60.034 55.000 0.00 0.00 0.00 3.56
618 619 1.101331 GAAGCTGAAGGAGGGCAATG 58.899 55.000 0.00 0.00 0.00 2.82
619 620 0.324091 AAGCTGAAGGAGGGCAATGG 60.324 55.000 0.00 0.00 0.00 3.16
620 621 2.421399 GCTGAAGGAGGGCAATGGC 61.421 63.158 0.00 0.00 40.13 4.40
632 633 0.179092 GCAATGGCCTCCTTGATTGC 60.179 55.000 17.40 17.40 42.71 3.56
633 634 1.481871 CAATGGCCTCCTTGATTGCT 58.518 50.000 3.32 0.00 0.00 3.91
634 635 1.407979 CAATGGCCTCCTTGATTGCTC 59.592 52.381 3.32 0.00 0.00 4.26
635 636 0.924823 ATGGCCTCCTTGATTGCTCT 59.075 50.000 3.32 0.00 0.00 4.09
636 637 0.034767 TGGCCTCCTTGATTGCTCTG 60.035 55.000 3.32 0.00 0.00 3.35
637 638 0.254178 GGCCTCCTTGATTGCTCTGA 59.746 55.000 0.00 0.00 0.00 3.27
638 639 1.133853 GGCCTCCTTGATTGCTCTGAT 60.134 52.381 0.00 0.00 0.00 2.90
639 640 2.105477 GGCCTCCTTGATTGCTCTGATA 59.895 50.000 0.00 0.00 0.00 2.15
640 641 3.401182 GCCTCCTTGATTGCTCTGATAG 58.599 50.000 0.00 0.00 0.00 2.08
641 642 3.181456 GCCTCCTTGATTGCTCTGATAGT 60.181 47.826 0.00 0.00 0.00 2.12
642 643 4.685575 GCCTCCTTGATTGCTCTGATAGTT 60.686 45.833 0.00 0.00 0.00 2.24
643 644 5.055812 CCTCCTTGATTGCTCTGATAGTTC 58.944 45.833 0.00 0.00 0.00 3.01
644 645 5.396101 CCTCCTTGATTGCTCTGATAGTTCA 60.396 44.000 0.00 0.00 0.00 3.18
652 653 3.669354 CTGATAGTTCAGCCGGTCC 57.331 57.895 1.90 0.00 42.79 4.46
653 654 0.105039 CTGATAGTTCAGCCGGTCCC 59.895 60.000 1.90 0.00 42.79 4.46
654 655 0.325296 TGATAGTTCAGCCGGTCCCT 60.325 55.000 1.90 0.00 0.00 4.20
655 656 0.105039 GATAGTTCAGCCGGTCCCTG 59.895 60.000 1.90 1.60 0.00 4.45
656 657 0.617820 ATAGTTCAGCCGGTCCCTGT 60.618 55.000 1.90 0.00 0.00 4.00
657 658 1.255667 TAGTTCAGCCGGTCCCTGTC 61.256 60.000 1.90 0.89 0.00 3.51
658 659 2.203788 TTCAGCCGGTCCCTGTCT 60.204 61.111 1.90 0.00 0.00 3.41
659 660 2.583441 TTCAGCCGGTCCCTGTCTG 61.583 63.158 1.90 0.00 0.00 3.51
660 661 3.314331 CAGCCGGTCCCTGTCTGT 61.314 66.667 1.90 0.00 0.00 3.41
661 662 2.997897 AGCCGGTCCCTGTCTGTC 60.998 66.667 1.90 0.00 0.00 3.51
662 663 4.083862 GCCGGTCCCTGTCTGTCC 62.084 72.222 1.90 0.00 0.00 4.02
663 664 3.760035 CCGGTCCCTGTCTGTCCG 61.760 72.222 0.00 0.00 40.72 4.79
664 665 2.675423 CGGTCCCTGTCTGTCCGA 60.675 66.667 0.00 0.00 43.22 4.55
665 666 2.701780 CGGTCCCTGTCTGTCCGAG 61.702 68.421 0.00 0.00 43.22 4.63
666 667 1.606889 GGTCCCTGTCTGTCCGAGT 60.607 63.158 0.00 0.00 0.00 4.18
667 668 1.186267 GGTCCCTGTCTGTCCGAGTT 61.186 60.000 0.00 0.00 0.00 3.01
668 669 0.680061 GTCCCTGTCTGTCCGAGTTT 59.320 55.000 0.00 0.00 0.00 2.66
669 670 0.679505 TCCCTGTCTGTCCGAGTTTG 59.320 55.000 0.00 0.00 0.00 2.93
670 671 0.679505 CCCTGTCTGTCCGAGTTTGA 59.320 55.000 0.00 0.00 0.00 2.69
671 672 1.070134 CCCTGTCTGTCCGAGTTTGAA 59.930 52.381 0.00 0.00 0.00 2.69
672 673 2.289694 CCCTGTCTGTCCGAGTTTGAAT 60.290 50.000 0.00 0.00 0.00 2.57
673 674 3.056107 CCCTGTCTGTCCGAGTTTGAATA 60.056 47.826 0.00 0.00 0.00 1.75
674 675 4.177026 CCTGTCTGTCCGAGTTTGAATAG 58.823 47.826 0.00 0.00 0.00 1.73
675 676 4.082190 CCTGTCTGTCCGAGTTTGAATAGA 60.082 45.833 0.00 0.00 0.00 1.98
676 677 5.462530 TGTCTGTCCGAGTTTGAATAGAA 57.537 39.130 0.00 0.00 0.00 2.10
677 678 6.037786 TGTCTGTCCGAGTTTGAATAGAAT 57.962 37.500 0.00 0.00 0.00 2.40
678 679 6.464222 TGTCTGTCCGAGTTTGAATAGAATT 58.536 36.000 0.00 0.00 0.00 2.17
679 680 6.590292 TGTCTGTCCGAGTTTGAATAGAATTC 59.410 38.462 0.00 0.00 0.00 2.17
680 681 5.805486 TCTGTCCGAGTTTGAATAGAATTCG 59.195 40.000 0.00 0.00 36.42 3.34
681 682 4.328983 TGTCCGAGTTTGAATAGAATTCGC 59.671 41.667 0.00 0.00 35.67 4.70
682 683 4.328983 GTCCGAGTTTGAATAGAATTCGCA 59.671 41.667 0.00 0.00 35.67 5.10
683 684 4.328983 TCCGAGTTTGAATAGAATTCGCAC 59.671 41.667 0.00 0.00 35.67 5.34
684 685 4.255999 CGAGTTTGAATAGAATTCGCACG 58.744 43.478 0.00 0.00 31.31 5.34
685 686 4.201589 CGAGTTTGAATAGAATTCGCACGT 60.202 41.667 0.00 0.00 31.31 4.49
686 687 5.004061 CGAGTTTGAATAGAATTCGCACGTA 59.996 40.000 0.00 0.00 31.31 3.57
687 688 6.291637 CGAGTTTGAATAGAATTCGCACGTAT 60.292 38.462 0.00 0.00 31.31 3.06
688 689 7.096763 CGAGTTTGAATAGAATTCGCACGTATA 60.097 37.037 0.00 0.00 31.31 1.47
689 690 8.415192 AGTTTGAATAGAATTCGCACGTATAA 57.585 30.769 0.00 0.00 0.00 0.98
690 691 9.042008 AGTTTGAATAGAATTCGCACGTATAAT 57.958 29.630 0.00 0.00 0.00 1.28
691 692 9.092322 GTTTGAATAGAATTCGCACGTATAATG 57.908 33.333 0.00 0.00 0.00 1.90
692 693 7.940178 TGAATAGAATTCGCACGTATAATGT 57.060 32.000 0.00 0.00 0.00 2.71
696 697 6.506464 AGAATTCGCACGTATAATGTACAC 57.494 37.500 0.00 0.00 0.00 2.90
719 720 1.182673 CGCGCTACGTACGTGTAATT 58.817 50.000 30.25 5.02 36.34 1.40
755 756 2.423898 ATGGTACGCCTCCCTCACG 61.424 63.158 0.00 0.00 35.27 4.35
762 763 4.463879 CCTCCCTCACGCTGCTGG 62.464 72.222 0.00 0.00 0.00 4.85
763 764 3.699894 CTCCCTCACGCTGCTGGT 61.700 66.667 0.00 0.00 0.00 4.00
764 765 3.947132 CTCCCTCACGCTGCTGGTG 62.947 68.421 0.00 0.00 36.74 4.17
787 788 4.754322 CCTAAACCCAATTAACATGCACC 58.246 43.478 0.00 0.00 0.00 5.01
803 804 3.632855 GCACCTGCATAATAAGCCTTC 57.367 47.619 0.00 0.00 41.59 3.46
806 807 4.454678 CACCTGCATAATAAGCCTTCTCA 58.545 43.478 0.00 0.00 0.00 3.27
808 809 5.357878 CACCTGCATAATAAGCCTTCTCAAA 59.642 40.000 0.00 0.00 0.00 2.69
809 810 6.040166 CACCTGCATAATAAGCCTTCTCAAAT 59.960 38.462 0.00 0.00 0.00 2.32
810 811 7.229306 CACCTGCATAATAAGCCTTCTCAAATA 59.771 37.037 0.00 0.00 0.00 1.40
811 812 7.779798 ACCTGCATAATAAGCCTTCTCAAATAA 59.220 33.333 0.00 0.00 0.00 1.40
812 813 8.632679 CCTGCATAATAAGCCTTCTCAAATAAA 58.367 33.333 0.00 0.00 0.00 1.40
816 817 9.450807 CATAATAAGCCTTCTCAAATAAAACCG 57.549 33.333 0.00 0.00 0.00 4.44
817 818 7.696992 AATAAGCCTTCTCAAATAAAACCGA 57.303 32.000 0.00 0.00 0.00 4.69
820 821 5.070685 AGCCTTCTCAAATAAAACCGAGTT 58.929 37.500 0.00 0.00 0.00 3.01
826 837 9.118236 CTTCTCAAATAAAACCGAGTTTGAATC 57.882 33.333 3.29 0.00 39.32 2.52
862 873 1.221840 CGTAGGTGGAATGCAGGCT 59.778 57.895 0.00 0.00 0.00 4.58
863 874 0.464036 CGTAGGTGGAATGCAGGCTA 59.536 55.000 0.00 0.00 0.00 3.93
864 875 1.539065 CGTAGGTGGAATGCAGGCTAG 60.539 57.143 0.00 0.00 0.00 3.42
865 876 0.469917 TAGGTGGAATGCAGGCTAGC 59.530 55.000 6.04 6.04 0.00 3.42
866 877 2.182842 GGTGGAATGCAGGCTAGCG 61.183 63.158 9.00 0.00 37.31 4.26
867 878 1.450312 GTGGAATGCAGGCTAGCGT 60.450 57.895 9.00 6.32 37.31 5.07
868 879 0.179084 GTGGAATGCAGGCTAGCGTA 60.179 55.000 10.04 0.00 37.31 4.42
869 880 0.179084 TGGAATGCAGGCTAGCGTAC 60.179 55.000 10.04 5.03 37.31 3.67
870 881 1.215655 GGAATGCAGGCTAGCGTACG 61.216 60.000 11.84 11.84 37.31 3.67
871 882 1.822250 GAATGCAGGCTAGCGTACGC 61.822 60.000 32.17 32.17 42.33 4.42
920 938 1.221414 GCATACGGCCTTGTGAGATC 58.779 55.000 10.34 0.00 36.11 2.75
925 943 1.347707 ACGGCCTTGTGAGATCAGAAA 59.652 47.619 0.00 0.00 0.00 2.52
956 974 1.767681 TCTCTCCCTACCTCCGTCTAC 59.232 57.143 0.00 0.00 0.00 2.59
964 982 2.528673 ACCTCCGTCTACCTAGCTTT 57.471 50.000 0.00 0.00 0.00 3.51
966 984 2.496470 ACCTCCGTCTACCTAGCTTTTG 59.504 50.000 0.00 0.00 0.00 2.44
1407 1462 1.059584 TTGTGGGGCCAACTCTCAGA 61.060 55.000 13.35 0.00 0.00 3.27
1416 1471 2.600731 CCAACTCTCAGACACGTCATC 58.399 52.381 0.00 0.00 0.00 2.92
1686 1742 2.354103 CCTCGGATGCACGGATTATGAT 60.354 50.000 0.00 0.00 0.00 2.45
1752 1808 3.615709 GCCGGCAAGCACCCTTTT 61.616 61.111 24.80 0.00 0.00 2.27
1998 2054 2.650116 GGAGAAGAGGCTCACGGCA 61.650 63.158 18.26 0.00 44.01 5.69
2068 2124 0.250338 AAGGAGCTGACCGGTGAAAC 60.250 55.000 14.63 0.00 34.73 2.78
2069 2125 1.070786 GGAGCTGACCGGTGAAACA 59.929 57.895 14.63 1.70 39.98 2.83
2168 2237 5.068460 AGTCTGTATGAGGTGTGAGATAAGC 59.932 44.000 0.00 0.00 0.00 3.09
2175 2244 2.304180 AGGTGTGAGATAAGCAAGCAGT 59.696 45.455 0.00 0.00 0.00 4.40
2180 2249 5.409826 GTGTGAGATAAGCAAGCAGTAGTTT 59.590 40.000 0.00 0.00 0.00 2.66
2182 2251 6.147821 TGTGAGATAAGCAAGCAGTAGTTTTC 59.852 38.462 0.00 0.00 0.00 2.29
2184 2253 5.810095 AGATAAGCAAGCAGTAGTTTTCCT 58.190 37.500 0.00 0.00 0.00 3.36
2185 2254 5.645497 AGATAAGCAAGCAGTAGTTTTCCTG 59.355 40.000 0.00 0.00 0.00 3.86
2186 2255 3.214696 AGCAAGCAGTAGTTTTCCTGT 57.785 42.857 0.00 0.00 0.00 4.00
2187 2256 2.880890 AGCAAGCAGTAGTTTTCCTGTG 59.119 45.455 0.00 0.00 0.00 3.66
2188 2257 2.618709 GCAAGCAGTAGTTTTCCTGTGT 59.381 45.455 0.00 0.00 0.00 3.72
2189 2258 3.813166 GCAAGCAGTAGTTTTCCTGTGTA 59.187 43.478 0.00 0.00 0.00 2.90
2190 2259 4.319549 GCAAGCAGTAGTTTTCCTGTGTAC 60.320 45.833 0.00 0.00 0.00 2.90
2191 2260 4.682778 AGCAGTAGTTTTCCTGTGTACA 57.317 40.909 0.00 0.00 0.00 2.90
2194 2263 4.573201 GCAGTAGTTTTCCTGTGTACACAA 59.427 41.667 27.66 12.95 41.33 3.33
2195 2264 5.238650 GCAGTAGTTTTCCTGTGTACACAAT 59.761 40.000 27.66 8.39 41.33 2.71
2196 2265 6.565999 GCAGTAGTTTTCCTGTGTACACAATC 60.566 42.308 27.66 12.97 41.33 2.67
2197 2266 6.706270 CAGTAGTTTTCCTGTGTACACAATCT 59.294 38.462 27.66 18.53 41.33 2.40
2198 2267 7.870954 CAGTAGTTTTCCTGTGTACACAATCTA 59.129 37.037 27.66 17.65 41.33 1.98
2199 2268 7.871463 AGTAGTTTTCCTGTGTACACAATCTAC 59.129 37.037 27.66 25.29 41.33 2.59
2200 2269 6.588204 AGTTTTCCTGTGTACACAATCTACA 58.412 36.000 27.66 9.32 41.33 2.74
2203 2272 4.552355 TCCTGTGTACACAATCTACAACG 58.448 43.478 27.66 13.47 41.33 4.10
2204 2273 3.678072 CCTGTGTACACAATCTACAACGG 59.322 47.826 27.66 18.10 41.33 4.44
2205 2274 3.061322 TGTGTACACAATCTACAACGGC 58.939 45.455 26.07 0.00 38.56 5.68
2206 2275 3.061322 GTGTACACAATCTACAACGGCA 58.939 45.455 21.14 0.00 0.00 5.69
2207 2276 3.682858 GTGTACACAATCTACAACGGCAT 59.317 43.478 21.14 0.00 0.00 4.40
2221 2290 5.788450 ACAACGGCATTTGATCCATTTTTA 58.212 33.333 3.69 0.00 0.00 1.52
2241 2313 7.817418 TTTTAGTGTGGTTTCTTGCTCTTAT 57.183 32.000 0.00 0.00 0.00 1.73
2242 2314 6.801539 TTAGTGTGGTTTCTTGCTCTTATG 57.198 37.500 0.00 0.00 0.00 1.90
2243 2315 3.503748 AGTGTGGTTTCTTGCTCTTATGC 59.496 43.478 0.00 0.00 0.00 3.14
2245 2317 4.695455 GTGTGGTTTCTTGCTCTTATGCTA 59.305 41.667 0.00 0.00 0.00 3.49
2246 2318 5.181245 GTGTGGTTTCTTGCTCTTATGCTAA 59.819 40.000 0.00 0.00 0.00 3.09
2248 2320 4.396166 TGGTTTCTTGCTCTTATGCTAAGC 59.604 41.667 0.00 0.00 36.56 3.09
2250 2322 5.327891 GTTTCTTGCTCTTATGCTAAGCAC 58.672 41.667 0.00 0.00 45.15 4.40
2251 2323 4.206477 TCTTGCTCTTATGCTAAGCACA 57.794 40.909 0.00 0.00 45.15 4.57
2254 2326 5.649395 TCTTGCTCTTATGCTAAGCACAAAT 59.351 36.000 0.00 0.00 45.15 2.32
2256 2328 5.883661 TGCTCTTATGCTAAGCACAAATTC 58.116 37.500 0.00 0.00 43.04 2.17
2257 2329 5.163622 TGCTCTTATGCTAAGCACAAATTCC 60.164 40.000 0.00 0.00 43.04 3.01
2258 2330 5.734503 GCTCTTATGCTAAGCACAAATTCCC 60.735 44.000 0.00 0.00 43.04 3.97
2260 2332 3.874392 ATGCTAAGCACAAATTCCCAC 57.126 42.857 0.00 0.00 43.04 4.61
2261 2333 2.591923 TGCTAAGCACAAATTCCCACA 58.408 42.857 0.00 0.00 31.71 4.17
2268 2382 6.418057 AAGCACAAATTCCCACAAGATTTA 57.582 33.333 0.00 0.00 0.00 1.40
2275 2389 9.271828 ACAAATTCCCACAAGATTTATTTGTTC 57.728 29.630 0.00 0.00 40.05 3.18
2282 2396 8.764287 CCCACAAGATTTATTTGTTCAGTTTTC 58.236 33.333 0.00 0.00 36.67 2.29
2290 2404 8.715191 TTTATTTGTTCAGTTTTCTGCAACAT 57.285 26.923 0.00 4.52 46.59 2.71
2302 2416 1.200716 CTGCAACATCCAGACGCATTT 59.799 47.619 0.00 0.00 32.03 2.32
2303 2417 1.199789 TGCAACATCCAGACGCATTTC 59.800 47.619 0.00 0.00 0.00 2.17
2304 2418 1.791555 GCAACATCCAGACGCATTTCG 60.792 52.381 0.00 0.00 45.38 3.46
2305 2419 0.447801 AACATCCAGACGCATTTCGC 59.552 50.000 0.00 0.00 43.23 4.70
2317 2451 1.142314 ATTTCGCATGGCATGGCAC 59.858 52.632 25.84 12.03 0.00 5.01
2370 2512 2.933287 ACCCGGATGACTTGCCCA 60.933 61.111 0.73 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.575783 GTTGGGAATCGTAGCATAATTTTAAAA 57.424 29.630 2.51 2.51 0.00 1.52
1 2 8.740906 TGTTGGGAATCGTAGCATAATTTTAAA 58.259 29.630 0.00 0.00 0.00 1.52
2 3 8.185505 GTGTTGGGAATCGTAGCATAATTTTAA 58.814 33.333 0.00 0.00 0.00 1.52
3 4 7.337184 TGTGTTGGGAATCGTAGCATAATTTTA 59.663 33.333 0.00 0.00 0.00 1.52
4 5 6.151985 TGTGTTGGGAATCGTAGCATAATTTT 59.848 34.615 0.00 0.00 0.00 1.82
5 6 5.650266 TGTGTTGGGAATCGTAGCATAATTT 59.350 36.000 0.00 0.00 0.00 1.82
6 7 5.189928 TGTGTTGGGAATCGTAGCATAATT 58.810 37.500 0.00 0.00 0.00 1.40
7 8 4.776349 TGTGTTGGGAATCGTAGCATAAT 58.224 39.130 0.00 0.00 0.00 1.28
8 9 4.209307 TGTGTTGGGAATCGTAGCATAA 57.791 40.909 0.00 0.00 0.00 1.90
9 10 3.897141 TGTGTTGGGAATCGTAGCATA 57.103 42.857 0.00 0.00 0.00 3.14
10 11 2.779755 TGTGTTGGGAATCGTAGCAT 57.220 45.000 0.00 0.00 0.00 3.79
11 12 2.550606 GTTTGTGTTGGGAATCGTAGCA 59.449 45.455 0.00 0.00 0.00 3.49
12 13 2.095415 GGTTTGTGTTGGGAATCGTAGC 60.095 50.000 0.00 0.00 0.00 3.58
13 14 2.158841 CGGTTTGTGTTGGGAATCGTAG 59.841 50.000 0.00 0.00 0.00 3.51
14 15 2.144730 CGGTTTGTGTTGGGAATCGTA 58.855 47.619 0.00 0.00 0.00 3.43
15 16 0.948678 CGGTTTGTGTTGGGAATCGT 59.051 50.000 0.00 0.00 0.00 3.73
16 17 1.069500 GTCGGTTTGTGTTGGGAATCG 60.069 52.381 0.00 0.00 0.00 3.34
17 18 1.268625 GGTCGGTTTGTGTTGGGAATC 59.731 52.381 0.00 0.00 0.00 2.52
18 19 1.324383 GGTCGGTTTGTGTTGGGAAT 58.676 50.000 0.00 0.00 0.00 3.01
19 20 0.034380 TGGTCGGTTTGTGTTGGGAA 60.034 50.000 0.00 0.00 0.00 3.97
20 21 0.748729 GTGGTCGGTTTGTGTTGGGA 60.749 55.000 0.00 0.00 0.00 4.37
21 22 1.730451 GGTGGTCGGTTTGTGTTGGG 61.730 60.000 0.00 0.00 0.00 4.12
22 23 1.032657 TGGTGGTCGGTTTGTGTTGG 61.033 55.000 0.00 0.00 0.00 3.77
23 24 0.099791 GTGGTGGTCGGTTTGTGTTG 59.900 55.000 0.00 0.00 0.00 3.33
24 25 1.033202 GGTGGTGGTCGGTTTGTGTT 61.033 55.000 0.00 0.00 0.00 3.32
25 26 1.452470 GGTGGTGGTCGGTTTGTGT 60.452 57.895 0.00 0.00 0.00 3.72
26 27 2.190841 GGGTGGTGGTCGGTTTGTG 61.191 63.158 0.00 0.00 0.00 3.33
27 28 2.193786 GGGTGGTGGTCGGTTTGT 59.806 61.111 0.00 0.00 0.00 2.83
28 29 1.896660 CTGGGTGGTGGTCGGTTTG 60.897 63.158 0.00 0.00 0.00 2.93
29 30 2.513895 CTGGGTGGTGGTCGGTTT 59.486 61.111 0.00 0.00 0.00 3.27
30 31 4.265056 GCTGGGTGGTGGTCGGTT 62.265 66.667 0.00 0.00 0.00 4.44
44 45 4.012895 GTGTCCGTGTTGGCGCTG 62.013 66.667 7.64 0.00 37.80 5.18
47 48 2.938823 CTTCGTGTCCGTGTTGGCG 61.939 63.158 0.00 0.00 37.80 5.69
48 49 2.935955 CTTCGTGTCCGTGTTGGC 59.064 61.111 0.00 0.00 37.80 4.52
49 50 1.157870 AAGCTTCGTGTCCGTGTTGG 61.158 55.000 0.00 0.00 40.09 3.77
50 51 0.232303 GAAGCTTCGTGTCCGTGTTG 59.768 55.000 11.40 0.00 35.01 3.33
51 52 0.878961 GGAAGCTTCGTGTCCGTGTT 60.879 55.000 19.91 0.00 35.01 3.32
52 53 1.300697 GGAAGCTTCGTGTCCGTGT 60.301 57.895 19.91 0.00 35.01 4.49
53 54 2.027625 GGGAAGCTTCGTGTCCGTG 61.028 63.158 19.91 0.00 35.01 4.94
54 55 2.342648 GGGAAGCTTCGTGTCCGT 59.657 61.111 19.91 0.00 35.01 4.69
55 56 2.027625 GTGGGAAGCTTCGTGTCCG 61.028 63.158 19.91 0.00 31.73 4.79
56 57 2.027625 CGTGGGAAGCTTCGTGTCC 61.028 63.158 19.91 15.27 0.00 4.02
57 58 2.668280 GCGTGGGAAGCTTCGTGTC 61.668 63.158 19.91 9.97 0.00 3.67
58 59 2.665185 GCGTGGGAAGCTTCGTGT 60.665 61.111 19.91 0.00 0.00 4.49
59 60 2.357517 AGCGTGGGAAGCTTCGTG 60.358 61.111 19.91 10.36 43.24 4.35
60 61 2.357517 CAGCGTGGGAAGCTTCGT 60.358 61.111 19.91 0.00 44.06 3.85
61 62 2.357517 ACAGCGTGGGAAGCTTCG 60.358 61.111 19.91 10.48 44.06 3.79
62 63 1.004440 AGACAGCGTGGGAAGCTTC 60.004 57.895 18.54 18.54 44.06 3.86
63 64 1.004440 GAGACAGCGTGGGAAGCTT 60.004 57.895 0.00 0.00 44.06 3.74
65 66 2.029844 GTGAGACAGCGTGGGAAGC 61.030 63.158 0.00 0.00 0.00 3.86
66 67 1.374758 GGTGAGACAGCGTGGGAAG 60.375 63.158 0.00 0.00 0.00 3.46
67 68 2.137528 TGGTGAGACAGCGTGGGAA 61.138 57.895 0.00 0.00 34.27 3.97
68 69 2.523168 TGGTGAGACAGCGTGGGA 60.523 61.111 0.00 0.00 34.27 4.37
69 70 2.357517 GTGGTGAGACAGCGTGGG 60.358 66.667 0.00 0.00 34.27 4.61
70 71 1.665916 CTGTGGTGAGACAGCGTGG 60.666 63.158 0.00 0.00 37.16 4.94
71 72 3.942500 CTGTGGTGAGACAGCGTG 58.057 61.111 0.00 0.00 37.16 5.34
75 76 1.665916 CGGTGCTGTGGTGAGACAG 60.666 63.158 0.00 0.00 45.34 3.51
76 77 2.421314 CGGTGCTGTGGTGAGACA 59.579 61.111 0.00 0.00 0.00 3.41
77 78 3.044305 GCGGTGCTGTGGTGAGAC 61.044 66.667 0.00 0.00 0.00 3.36
78 79 4.662961 CGCGGTGCTGTGGTGAGA 62.663 66.667 0.00 0.00 0.00 3.27
79 80 4.662961 TCGCGGTGCTGTGGTGAG 62.663 66.667 6.13 0.00 0.00 3.51
80 81 4.228567 TTCGCGGTGCTGTGGTGA 62.229 61.111 6.13 0.00 0.00 4.02
81 82 3.716006 CTTCGCGGTGCTGTGGTG 61.716 66.667 6.13 0.00 0.00 4.17
82 83 3.240134 ATCTTCGCGGTGCTGTGGT 62.240 57.895 6.13 0.00 0.00 4.16
83 84 2.434884 ATCTTCGCGGTGCTGTGG 60.435 61.111 6.13 0.00 0.00 4.17
84 85 2.743752 CCATCTTCGCGGTGCTGTG 61.744 63.158 6.13 0.00 0.00 3.66
85 86 2.434884 CCATCTTCGCGGTGCTGT 60.435 61.111 6.13 0.00 0.00 4.40
86 87 3.869272 GCCATCTTCGCGGTGCTG 61.869 66.667 6.13 0.99 0.00 4.41
89 90 3.197790 CAGGCCATCTTCGCGGTG 61.198 66.667 6.13 0.00 0.00 4.94
92 93 3.869272 GTGCAGGCCATCTTCGCG 61.869 66.667 5.01 0.00 0.00 5.87
93 94 2.334946 TTGTGCAGGCCATCTTCGC 61.335 57.895 5.01 0.00 0.00 4.70
94 95 1.503542 GTTGTGCAGGCCATCTTCG 59.496 57.895 5.01 0.00 0.00 3.79
95 96 0.955428 TCGTTGTGCAGGCCATCTTC 60.955 55.000 5.01 0.00 0.00 2.87
96 97 0.537143 TTCGTTGTGCAGGCCATCTT 60.537 50.000 5.01 0.00 0.00 2.40
97 98 0.957395 CTTCGTTGTGCAGGCCATCT 60.957 55.000 5.01 0.00 0.00 2.90
98 99 0.955428 TCTTCGTTGTGCAGGCCATC 60.955 55.000 5.01 0.00 0.00 3.51
99 100 0.537143 TTCTTCGTTGTGCAGGCCAT 60.537 50.000 5.01 0.00 0.00 4.40
100 101 1.153066 TTCTTCGTTGTGCAGGCCA 60.153 52.632 5.01 0.00 0.00 5.36
101 102 0.884704 TCTTCTTCGTTGTGCAGGCC 60.885 55.000 0.00 0.00 0.00 5.19
102 103 0.514691 CTCTTCTTCGTTGTGCAGGC 59.485 55.000 0.00 0.00 0.00 4.85
103 104 1.151668 CCTCTTCTTCGTTGTGCAGG 58.848 55.000 0.00 0.00 0.00 4.85
104 105 2.064762 CTCCTCTTCTTCGTTGTGCAG 58.935 52.381 0.00 0.00 0.00 4.41
105 106 1.873903 GCTCCTCTTCTTCGTTGTGCA 60.874 52.381 0.00 0.00 0.00 4.57
106 107 0.793250 GCTCCTCTTCTTCGTTGTGC 59.207 55.000 0.00 0.00 0.00 4.57
107 108 1.433534 GGCTCCTCTTCTTCGTTGTG 58.566 55.000 0.00 0.00 0.00 3.33
108 109 0.038159 CGGCTCCTCTTCTTCGTTGT 60.038 55.000 0.00 0.00 0.00 3.32
109 110 0.737715 CCGGCTCCTCTTCTTCGTTG 60.738 60.000 0.00 0.00 0.00 4.10
110 111 1.592223 CCGGCTCCTCTTCTTCGTT 59.408 57.895 0.00 0.00 0.00 3.85
111 112 2.352032 CCCGGCTCCTCTTCTTCGT 61.352 63.158 0.00 0.00 0.00 3.85
112 113 2.052690 TCCCGGCTCCTCTTCTTCG 61.053 63.158 0.00 0.00 0.00 3.79
113 114 0.973496 AGTCCCGGCTCCTCTTCTTC 60.973 60.000 0.00 0.00 0.00 2.87
114 115 0.335361 TAGTCCCGGCTCCTCTTCTT 59.665 55.000 0.00 0.00 0.00 2.52
115 116 0.106419 CTAGTCCCGGCTCCTCTTCT 60.106 60.000 0.00 0.00 0.00 2.85
116 117 0.396001 ACTAGTCCCGGCTCCTCTTC 60.396 60.000 0.00 0.00 0.00 2.87
117 118 0.684805 CACTAGTCCCGGCTCCTCTT 60.685 60.000 0.00 0.00 0.00 2.85
118 119 1.076632 CACTAGTCCCGGCTCCTCT 60.077 63.158 0.00 0.00 0.00 3.69
119 120 2.787567 GCACTAGTCCCGGCTCCTC 61.788 68.421 0.00 0.00 0.00 3.71
120 121 2.760385 GCACTAGTCCCGGCTCCT 60.760 66.667 0.00 0.00 0.00 3.69
121 122 3.075005 TGCACTAGTCCCGGCTCC 61.075 66.667 0.00 0.00 0.00 4.70
122 123 2.496817 CTGCACTAGTCCCGGCTC 59.503 66.667 0.00 0.00 0.00 4.70
123 124 3.775654 GCTGCACTAGTCCCGGCT 61.776 66.667 13.95 0.00 0.00 5.52
124 125 4.082523 TGCTGCACTAGTCCCGGC 62.083 66.667 14.23 14.23 0.00 6.13
125 126 2.185350 CTGCTGCACTAGTCCCGG 59.815 66.667 0.00 0.00 0.00 5.73
126 127 2.510238 GCTGCTGCACTAGTCCCG 60.510 66.667 11.11 0.00 39.41 5.14
127 128 2.665000 TGCTGCTGCACTAGTCCC 59.335 61.111 14.93 0.00 45.31 4.46
138 139 3.770040 TATGCCGACGGTGCTGCT 61.770 61.111 16.73 0.00 0.00 4.24
139 140 3.564027 GTATGCCGACGGTGCTGC 61.564 66.667 16.73 0.38 0.00 5.25
140 141 3.254654 CGTATGCCGACGGTGCTG 61.255 66.667 16.73 0.00 39.19 4.41
146 147 4.280494 CCCTCCCGTATGCCGACG 62.280 72.222 0.71 0.71 42.55 5.12
147 148 4.603946 GCCCTCCCGTATGCCGAC 62.604 72.222 0.00 0.00 39.56 4.79
165 166 4.016706 GTGGACGGTGGAGGTGGG 62.017 72.222 0.00 0.00 0.00 4.61
166 167 4.373116 CGTGGACGGTGGAGGTGG 62.373 72.222 0.00 0.00 35.37 4.61
167 168 2.646175 ATCGTGGACGGTGGAGGTG 61.646 63.158 0.00 0.00 40.29 4.00
168 169 2.283676 ATCGTGGACGGTGGAGGT 60.284 61.111 0.00 0.00 40.29 3.85
169 170 2.184322 CATCGTGGACGGTGGAGG 59.816 66.667 4.47 0.00 45.94 4.30
174 175 2.718073 GGCTACCATCGTGGACGGT 61.718 63.158 10.46 0.00 40.96 4.83
175 176 2.106332 GGCTACCATCGTGGACGG 59.894 66.667 10.46 0.00 40.96 4.79
176 177 2.278596 CGGCTACCATCGTGGACG 60.279 66.667 10.46 0.00 46.15 4.79
177 178 1.226888 GTCGGCTACCATCGTGGAC 60.227 63.158 10.46 1.09 40.96 4.02
178 179 3.203442 GTCGGCTACCATCGTGGA 58.797 61.111 10.46 0.00 40.96 4.02
191 192 4.944372 GCTATGGCGTCCGGTCGG 62.944 72.222 22.18 6.58 0.00 4.79
192 193 4.201679 TGCTATGGCGTCCGGTCG 62.202 66.667 17.02 17.02 42.25 4.79
193 194 2.279517 CTGCTATGGCGTCCGGTC 60.280 66.667 0.00 0.00 42.25 4.79
194 195 3.849951 CCTGCTATGGCGTCCGGT 61.850 66.667 0.00 0.00 42.25 5.28
195 196 3.506059 CTCCTGCTATGGCGTCCGG 62.506 68.421 0.00 0.00 42.25 5.14
196 197 2.028190 CTCCTGCTATGGCGTCCG 59.972 66.667 0.00 0.00 42.25 4.79
197 198 2.280457 GCTCCTGCTATGGCGTCC 60.280 66.667 0.00 0.00 42.25 4.79
198 199 1.464376 TAGGCTCCTGCTATGGCGTC 61.464 60.000 0.00 0.00 42.25 5.19
199 200 1.457643 TAGGCTCCTGCTATGGCGT 60.458 57.895 0.00 0.00 42.25 5.68
200 201 1.005630 GTAGGCTCCTGCTATGGCG 60.006 63.158 0.00 0.00 42.25 5.69
201 202 1.373059 GGTAGGCTCCTGCTATGGC 59.627 63.158 4.09 0.00 39.59 4.40
202 203 1.668294 CGGTAGGCTCCTGCTATGG 59.332 63.158 4.09 0.00 39.59 2.74
203 204 1.668294 CCGGTAGGCTCCTGCTATG 59.332 63.158 4.09 0.00 39.59 2.23
204 205 1.534235 CCCGGTAGGCTCCTGCTAT 60.534 63.158 0.00 0.00 39.59 2.97
205 206 2.123425 CCCGGTAGGCTCCTGCTA 60.123 66.667 0.00 0.00 39.59 3.49
249 250 3.628646 CTGTCCGGGCCTTTGAGGG 62.629 68.421 2.12 0.00 35.37 4.30
250 251 2.045926 CTGTCCGGGCCTTTGAGG 60.046 66.667 2.12 0.00 38.80 3.86
251 252 2.747855 GCTGTCCGGGCCTTTGAG 60.748 66.667 2.12 0.00 0.00 3.02
252 253 3.249189 AGCTGTCCGGGCCTTTGA 61.249 61.111 2.12 0.00 0.00 2.69
253 254 2.747855 GAGCTGTCCGGGCCTTTG 60.748 66.667 2.12 0.00 0.00 2.77
254 255 4.035102 GGAGCTGTCCGGGCCTTT 62.035 66.667 2.12 0.00 31.37 3.11
273 274 4.099170 CAGCTGCTGCGTGAAGGC 62.099 66.667 17.73 0.00 45.42 4.35
274 275 3.429141 CCAGCTGCTGCGTGAAGG 61.429 66.667 23.86 4.79 45.42 3.46
275 276 4.099170 GCCAGCTGCTGCGTGAAG 62.099 66.667 23.86 10.29 45.42 3.02
276 277 4.933563 TGCCAGCTGCTGCGTGAA 62.934 61.111 23.86 2.35 45.42 3.18
277 278 4.710167 ATGCCAGCTGCTGCGTGA 62.710 61.111 23.86 7.30 45.42 4.35
278 279 4.476410 CATGCCAGCTGCTGCGTG 62.476 66.667 23.86 22.96 45.42 5.34
309 310 4.329545 GCGGCTTGGACTGGGACA 62.330 66.667 0.00 0.00 0.00 4.02
310 311 3.959991 GAGCGGCTTGGACTGGGAC 62.960 68.421 2.97 0.00 0.00 4.46
311 312 3.706373 GAGCGGCTTGGACTGGGA 61.706 66.667 2.97 0.00 0.00 4.37
312 313 4.785453 GGAGCGGCTTGGACTGGG 62.785 72.222 2.97 0.00 0.00 4.45
313 314 4.785453 GGGAGCGGCTTGGACTGG 62.785 72.222 2.97 0.00 0.00 4.00
314 315 4.785453 GGGGAGCGGCTTGGACTG 62.785 72.222 2.97 0.00 0.00 3.51
316 317 4.785453 CAGGGGAGCGGCTTGGAC 62.785 72.222 2.97 0.00 0.00 4.02
325 326 2.078665 TATGGGAAGGCAGGGGAGC 61.079 63.158 0.00 0.00 0.00 4.70
326 327 1.839894 GTATGGGAAGGCAGGGGAG 59.160 63.158 0.00 0.00 0.00 4.30
327 328 2.070039 CGTATGGGAAGGCAGGGGA 61.070 63.158 0.00 0.00 0.00 4.81
328 329 2.510906 CGTATGGGAAGGCAGGGG 59.489 66.667 0.00 0.00 0.00 4.79
329 330 2.044806 CTCCGTATGGGAAGGCAGGG 62.045 65.000 0.00 0.00 46.61 4.45
330 331 1.447643 CTCCGTATGGGAAGGCAGG 59.552 63.158 0.00 0.00 46.61 4.85
331 332 1.447643 CCTCCGTATGGGAAGGCAG 59.552 63.158 0.00 0.00 46.61 4.85
332 333 2.070039 CCCTCCGTATGGGAAGGCA 61.070 63.158 0.00 0.00 46.61 4.75
333 334 2.829592 CCCTCCGTATGGGAAGGC 59.170 66.667 0.00 0.00 46.61 4.35
335 336 2.421739 CGCCCTCCGTATGGGAAG 59.578 66.667 0.00 0.00 46.61 3.46
357 358 4.773117 GTCGACTCCGGTGCGACC 62.773 72.222 27.68 17.17 46.15 4.79
364 365 4.796231 CTTGCGGGTCGACTCCGG 62.796 72.222 32.36 19.75 46.86 5.14
366 367 3.379445 TCCTTGCGGGTCGACTCC 61.379 66.667 16.46 13.73 36.25 3.85
367 368 2.126031 GTCCTTGCGGGTCGACTC 60.126 66.667 16.46 11.18 36.25 3.36
368 369 3.692406 GGTCCTTGCGGGTCGACT 61.692 66.667 16.46 0.00 36.25 4.18
369 370 4.754667 GGGTCCTTGCGGGTCGAC 62.755 72.222 7.13 7.13 36.25 4.20
371 372 3.835790 TTTGGGTCCTTGCGGGTCG 62.836 63.158 0.00 0.00 36.25 4.79
372 373 2.114411 TTTGGGTCCTTGCGGGTC 59.886 61.111 0.00 0.00 36.25 4.46
373 374 2.203437 GTTTGGGTCCTTGCGGGT 60.203 61.111 0.00 0.00 36.25 5.28
374 375 3.361977 CGTTTGGGTCCTTGCGGG 61.362 66.667 0.00 0.00 0.00 6.13
375 376 3.361977 CCGTTTGGGTCCTTGCGG 61.362 66.667 0.00 0.00 0.00 5.69
397 398 2.511452 CCCTGATCTGGGCCCGTAG 61.511 68.421 23.35 10.48 40.84 3.51
398 399 2.445845 CCCTGATCTGGGCCCGTA 60.446 66.667 23.35 8.02 40.84 4.02
402 403 3.493303 GACCCCCTGATCTGGGCC 61.493 72.222 28.08 16.66 46.43 5.80
403 404 2.367512 AGACCCCCTGATCTGGGC 60.368 66.667 28.08 16.66 46.43 5.36
404 405 1.003442 TCAGACCCCCTGATCTGGG 59.997 63.158 26.86 26.86 46.38 4.45
405 406 4.816109 TCAGACCCCCTGATCTGG 57.184 61.111 11.58 11.58 46.38 3.86
415 416 4.860022 CCATATATGGGGATTTCAGACCC 58.140 47.826 22.31 0.00 44.31 4.46
429 430 4.261741 GGTTCTTGGTGCAAGCCATATATG 60.262 45.833 5.68 5.68 40.84 1.78
430 431 3.891366 GGTTCTTGGTGCAAGCCATATAT 59.109 43.478 0.00 0.00 40.84 0.86
431 432 3.053693 AGGTTCTTGGTGCAAGCCATATA 60.054 43.478 0.00 0.00 40.84 0.86
432 433 2.102578 GGTTCTTGGTGCAAGCCATAT 58.897 47.619 0.00 0.00 40.84 1.78
433 434 1.075374 AGGTTCTTGGTGCAAGCCATA 59.925 47.619 0.00 0.00 40.84 2.74
434 435 0.178953 AGGTTCTTGGTGCAAGCCAT 60.179 50.000 0.00 0.00 40.84 4.40
435 436 0.476338 TAGGTTCTTGGTGCAAGCCA 59.524 50.000 0.00 0.00 40.84 4.75
436 437 1.745653 GATAGGTTCTTGGTGCAAGCC 59.254 52.381 0.00 0.00 40.84 4.35
437 438 2.436417 TGATAGGTTCTTGGTGCAAGC 58.564 47.619 0.00 0.00 40.84 4.01
438 439 4.616835 GCTTTGATAGGTTCTTGGTGCAAG 60.617 45.833 0.00 0.00 42.25 4.01
439 440 3.255642 GCTTTGATAGGTTCTTGGTGCAA 59.744 43.478 0.00 0.00 0.00 4.08
440 441 2.819608 GCTTTGATAGGTTCTTGGTGCA 59.180 45.455 0.00 0.00 0.00 4.57
441 442 2.164422 GGCTTTGATAGGTTCTTGGTGC 59.836 50.000 0.00 0.00 0.00 5.01
442 443 2.420022 CGGCTTTGATAGGTTCTTGGTG 59.580 50.000 0.00 0.00 0.00 4.17
443 444 2.304761 TCGGCTTTGATAGGTTCTTGGT 59.695 45.455 0.00 0.00 0.00 3.67
444 445 2.985896 TCGGCTTTGATAGGTTCTTGG 58.014 47.619 0.00 0.00 0.00 3.61
445 446 4.253685 TCTTCGGCTTTGATAGGTTCTTG 58.746 43.478 0.00 0.00 0.00 3.02
446 447 4.508662 CTCTTCGGCTTTGATAGGTTCTT 58.491 43.478 0.00 0.00 0.00 2.52
447 448 3.118592 CCTCTTCGGCTTTGATAGGTTCT 60.119 47.826 0.00 0.00 0.00 3.01
448 449 3.118738 TCCTCTTCGGCTTTGATAGGTTC 60.119 47.826 0.00 0.00 0.00 3.62
449 450 2.838202 TCCTCTTCGGCTTTGATAGGTT 59.162 45.455 0.00 0.00 0.00 3.50
450 451 2.467880 TCCTCTTCGGCTTTGATAGGT 58.532 47.619 0.00 0.00 0.00 3.08
451 452 3.198872 GTTCCTCTTCGGCTTTGATAGG 58.801 50.000 0.00 0.00 0.00 2.57
452 453 2.860735 CGTTCCTCTTCGGCTTTGATAG 59.139 50.000 0.00 0.00 0.00 2.08
453 454 2.232941 ACGTTCCTCTTCGGCTTTGATA 59.767 45.455 0.00 0.00 0.00 2.15
454 455 1.002087 ACGTTCCTCTTCGGCTTTGAT 59.998 47.619 0.00 0.00 0.00 2.57
455 456 0.391597 ACGTTCCTCTTCGGCTTTGA 59.608 50.000 0.00 0.00 0.00 2.69
456 457 0.512952 CACGTTCCTCTTCGGCTTTG 59.487 55.000 0.00 0.00 0.00 2.77
457 458 1.228657 GCACGTTCCTCTTCGGCTTT 61.229 55.000 0.00 0.00 0.00 3.51
458 459 1.668151 GCACGTTCCTCTTCGGCTT 60.668 57.895 0.00 0.00 0.00 4.35
459 460 2.048127 GCACGTTCCTCTTCGGCT 60.048 61.111 0.00 0.00 0.00 5.52
460 461 3.479269 CGCACGTTCCTCTTCGGC 61.479 66.667 0.00 0.00 0.00 5.54
461 462 2.087009 GTCGCACGTTCCTCTTCGG 61.087 63.158 0.00 0.00 0.00 4.30
462 463 1.371267 TGTCGCACGTTCCTCTTCG 60.371 57.895 0.00 0.00 0.00 3.79
463 464 1.282930 GGTGTCGCACGTTCCTCTTC 61.283 60.000 0.00 0.00 34.83 2.87
464 465 1.300697 GGTGTCGCACGTTCCTCTT 60.301 57.895 0.00 0.00 34.83 2.85
465 466 2.338984 GGTGTCGCACGTTCCTCT 59.661 61.111 0.00 0.00 34.83 3.69
466 467 2.028484 TGGTGTCGCACGTTCCTC 59.972 61.111 0.00 0.00 34.83 3.71
467 468 2.279918 GTGGTGTCGCACGTTCCT 60.280 61.111 0.00 0.00 34.83 3.36
468 469 3.343421 GGTGGTGTCGCACGTTCC 61.343 66.667 0.00 3.58 34.83 3.62
469 470 2.279918 AGGTGGTGTCGCACGTTC 60.280 61.111 0.00 0.00 34.83 3.95
470 471 2.587753 CAGGTGGTGTCGCACGTT 60.588 61.111 0.00 0.00 34.83 3.99
473 474 3.649986 GTGCAGGTGGTGTCGCAC 61.650 66.667 0.00 0.00 46.85 5.34
474 475 4.927782 GGTGCAGGTGGTGTCGCA 62.928 66.667 0.00 0.00 0.00 5.10
498 499 1.073199 ACTGAACTTTGCCGAGGGG 59.927 57.895 0.00 0.00 0.00 4.79
499 500 1.856265 GCACTGAACTTTGCCGAGGG 61.856 60.000 0.00 0.00 32.21 4.30
500 501 1.165907 TGCACTGAACTTTGCCGAGG 61.166 55.000 0.00 0.00 38.00 4.63
501 502 0.877071 ATGCACTGAACTTTGCCGAG 59.123 50.000 0.00 0.00 38.00 4.63
502 503 0.874390 GATGCACTGAACTTTGCCGA 59.126 50.000 0.00 0.00 38.00 5.54
503 504 0.592637 TGATGCACTGAACTTTGCCG 59.407 50.000 0.00 0.00 38.00 5.69
504 505 2.416431 GGATGATGCACTGAACTTTGCC 60.416 50.000 0.00 0.00 38.00 4.52
505 506 2.730090 CGGATGATGCACTGAACTTTGC 60.730 50.000 0.00 0.00 39.33 3.68
506 507 2.485426 ACGGATGATGCACTGAACTTTG 59.515 45.455 0.00 0.00 0.00 2.77
507 508 2.744202 GACGGATGATGCACTGAACTTT 59.256 45.455 0.00 0.00 0.00 2.66
508 509 2.350522 GACGGATGATGCACTGAACTT 58.649 47.619 0.00 0.00 0.00 2.66
509 510 1.737029 CGACGGATGATGCACTGAACT 60.737 52.381 0.00 0.00 0.00 3.01
510 511 0.647410 CGACGGATGATGCACTGAAC 59.353 55.000 0.00 0.00 0.00 3.18
511 512 0.246360 ACGACGGATGATGCACTGAA 59.754 50.000 0.00 0.00 0.00 3.02
512 513 0.458370 CACGACGGATGATGCACTGA 60.458 55.000 0.00 0.00 0.00 3.41
513 514 0.458370 TCACGACGGATGATGCACTG 60.458 55.000 0.00 0.00 0.00 3.66
514 515 0.461548 ATCACGACGGATGATGCACT 59.538 50.000 0.00 0.00 35.44 4.40
515 516 1.290203 AATCACGACGGATGATGCAC 58.710 50.000 0.00 0.00 36.89 4.57
516 517 2.022764 AAATCACGACGGATGATGCA 57.977 45.000 0.00 0.00 36.89 3.96
517 518 3.405170 AAAAATCACGACGGATGATGC 57.595 42.857 0.00 0.00 36.89 3.91
518 519 5.063438 ACTGTAAAAATCACGACGGATGATG 59.937 40.000 0.00 0.00 36.89 3.07
519 520 5.175859 ACTGTAAAAATCACGACGGATGAT 58.824 37.500 0.00 0.00 38.47 2.45
520 521 4.562082 ACTGTAAAAATCACGACGGATGA 58.438 39.130 0.00 0.00 0.00 2.92
521 522 4.921470 ACTGTAAAAATCACGACGGATG 57.079 40.909 0.00 0.00 0.00 3.51
522 523 4.565564 GCTACTGTAAAAATCACGACGGAT 59.434 41.667 0.00 0.00 0.00 4.18
523 524 3.922240 GCTACTGTAAAAATCACGACGGA 59.078 43.478 0.00 0.00 0.00 4.69
524 525 3.676172 TGCTACTGTAAAAATCACGACGG 59.324 43.478 0.00 0.00 0.00 4.79
525 526 4.896562 TGCTACTGTAAAAATCACGACG 57.103 40.909 0.00 0.00 0.00 5.12
526 527 6.403333 TGATGCTACTGTAAAAATCACGAC 57.597 37.500 0.00 0.00 0.00 4.34
527 528 6.816140 TGATGATGCTACTGTAAAAATCACGA 59.184 34.615 8.18 0.00 0.00 4.35
528 529 7.003939 TGATGATGCTACTGTAAAAATCACG 57.996 36.000 8.18 0.00 0.00 4.35
529 530 7.066284 ACCTGATGATGCTACTGTAAAAATCAC 59.934 37.037 8.18 5.22 0.00 3.06
530 531 7.066163 CACCTGATGATGCTACTGTAAAAATCA 59.934 37.037 8.36 8.36 0.00 2.57
531 532 7.412853 CACCTGATGATGCTACTGTAAAAATC 58.587 38.462 0.00 0.00 0.00 2.17
532 533 6.319658 CCACCTGATGATGCTACTGTAAAAAT 59.680 38.462 0.00 0.00 0.00 1.82
533 534 5.647658 CCACCTGATGATGCTACTGTAAAAA 59.352 40.000 0.00 0.00 0.00 1.94
534 535 5.185454 CCACCTGATGATGCTACTGTAAAA 58.815 41.667 0.00 0.00 0.00 1.52
535 536 4.225042 ACCACCTGATGATGCTACTGTAAA 59.775 41.667 0.00 0.00 0.00 2.01
536 537 3.774766 ACCACCTGATGATGCTACTGTAA 59.225 43.478 0.00 0.00 0.00 2.41
537 538 3.374764 ACCACCTGATGATGCTACTGTA 58.625 45.455 0.00 0.00 0.00 2.74
538 539 2.169352 GACCACCTGATGATGCTACTGT 59.831 50.000 0.00 0.00 0.00 3.55
539 540 2.433604 AGACCACCTGATGATGCTACTG 59.566 50.000 0.00 0.00 0.00 2.74
540 541 2.697751 GAGACCACCTGATGATGCTACT 59.302 50.000 0.00 0.00 0.00 2.57
541 542 2.544694 CGAGACCACCTGATGATGCTAC 60.545 54.545 0.00 0.00 0.00 3.58
542 543 1.683385 CGAGACCACCTGATGATGCTA 59.317 52.381 0.00 0.00 0.00 3.49
543 544 0.463204 CGAGACCACCTGATGATGCT 59.537 55.000 0.00 0.00 0.00 3.79
544 545 0.461548 TCGAGACCACCTGATGATGC 59.538 55.000 0.00 0.00 0.00 3.91
545 546 1.537776 GCTCGAGACCACCTGATGATG 60.538 57.143 18.75 0.00 0.00 3.07
546 547 0.749649 GCTCGAGACCACCTGATGAT 59.250 55.000 18.75 0.00 0.00 2.45
547 548 1.323271 GGCTCGAGACCACCTGATGA 61.323 60.000 18.75 0.00 0.00 2.92
548 549 1.142748 GGCTCGAGACCACCTGATG 59.857 63.158 18.75 0.00 0.00 3.07
549 550 0.689080 ATGGCTCGAGACCACCTGAT 60.689 55.000 24.61 10.66 40.82 2.90
550 551 0.033503 TATGGCTCGAGACCACCTGA 60.034 55.000 24.61 11.87 40.82 3.86
551 552 0.824109 TTATGGCTCGAGACCACCTG 59.176 55.000 24.61 0.00 40.82 4.00
552 553 0.824759 GTTATGGCTCGAGACCACCT 59.175 55.000 24.61 15.49 40.82 4.00
553 554 0.179081 GGTTATGGCTCGAGACCACC 60.179 60.000 24.61 19.52 40.82 4.61
554 555 0.535335 TGGTTATGGCTCGAGACCAC 59.465 55.000 24.61 15.18 40.82 4.16
555 556 0.824109 CTGGTTATGGCTCGAGACCA 59.176 55.000 24.41 24.41 42.61 4.02
556 557 0.105039 CCTGGTTATGGCTCGAGACC 59.895 60.000 17.58 16.75 0.00 3.85
557 558 0.824759 ACCTGGTTATGGCTCGAGAC 59.175 55.000 18.75 15.81 0.00 3.36
558 559 2.429610 GTTACCTGGTTATGGCTCGAGA 59.570 50.000 18.75 0.00 0.00 4.04
559 560 2.167693 TGTTACCTGGTTATGGCTCGAG 59.832 50.000 8.45 8.45 0.00 4.04
560 561 2.181125 TGTTACCTGGTTATGGCTCGA 58.819 47.619 3.84 0.00 0.00 4.04
561 562 2.684001 TGTTACCTGGTTATGGCTCG 57.316 50.000 3.84 0.00 0.00 5.03
562 563 4.065789 GCTATGTTACCTGGTTATGGCTC 58.934 47.826 3.84 0.00 0.00 4.70
563 564 3.494398 CGCTATGTTACCTGGTTATGGCT 60.494 47.826 3.84 0.00 0.00 4.75
564 565 2.806244 CGCTATGTTACCTGGTTATGGC 59.194 50.000 3.84 10.22 0.00 4.40
565 566 3.399330 CCGCTATGTTACCTGGTTATGG 58.601 50.000 3.84 1.20 0.00 2.74
566 567 2.806244 GCCGCTATGTTACCTGGTTATG 59.194 50.000 3.84 0.00 0.00 1.90
567 568 2.704065 AGCCGCTATGTTACCTGGTTAT 59.296 45.455 3.84 0.30 0.00 1.89
568 569 2.112998 AGCCGCTATGTTACCTGGTTA 58.887 47.619 3.84 0.00 0.00 2.85
569 570 0.909623 AGCCGCTATGTTACCTGGTT 59.090 50.000 3.84 0.00 0.00 3.67
570 571 0.178068 CAGCCGCTATGTTACCTGGT 59.822 55.000 4.05 4.05 0.00 4.00
571 572 1.160329 GCAGCCGCTATGTTACCTGG 61.160 60.000 0.00 0.00 34.30 4.45
572 573 1.160329 GGCAGCCGCTATGTTACCTG 61.160 60.000 0.00 0.00 38.60 4.00
573 574 1.146263 GGCAGCCGCTATGTTACCT 59.854 57.895 0.00 0.00 38.60 3.08
574 575 0.463833 AAGGCAGCCGCTATGTTACC 60.464 55.000 5.55 0.00 38.60 2.85
575 576 1.865340 GTAAGGCAGCCGCTATGTTAC 59.135 52.381 5.55 4.52 38.60 2.50
576 577 1.537348 CGTAAGGCAGCCGCTATGTTA 60.537 52.381 5.55 0.00 38.60 2.41
577 578 0.810031 CGTAAGGCAGCCGCTATGTT 60.810 55.000 5.55 0.00 38.60 2.71
578 579 1.227263 CGTAAGGCAGCCGCTATGT 60.227 57.895 5.55 0.00 38.60 2.29
579 580 2.598632 GCGTAAGGCAGCCGCTATG 61.599 63.158 5.55 8.50 43.81 2.23
580 581 2.280186 GCGTAAGGCAGCCGCTAT 60.280 61.111 5.55 0.00 43.81 2.97
581 582 4.865761 CGCGTAAGGCAGCCGCTA 62.866 66.667 5.55 0.00 44.92 4.26
585 586 3.195698 CTTCCGCGTAAGGCAGCC 61.196 66.667 1.84 1.84 43.84 4.85
586 587 3.865830 GCTTCCGCGTAAGGCAGC 61.866 66.667 13.59 1.16 42.74 5.25
587 588 2.125512 AGCTTCCGCGTAAGGCAG 60.126 61.111 13.59 0.00 43.84 4.85
588 589 2.434185 CAGCTTCCGCGTAAGGCA 60.434 61.111 13.59 0.00 43.84 4.75
589 590 1.696832 CTTCAGCTTCCGCGTAAGGC 61.697 60.000 13.59 9.02 42.32 4.35
590 591 1.084370 CCTTCAGCTTCCGCGTAAGG 61.084 60.000 13.59 6.50 42.44 2.69
591 592 0.108804 TCCTTCAGCTTCCGCGTAAG 60.109 55.000 7.12 7.12 42.32 2.34
592 593 0.108804 CTCCTTCAGCTTCCGCGTAA 60.109 55.000 4.92 0.00 42.32 3.18
593 594 1.511305 CTCCTTCAGCTTCCGCGTA 59.489 57.895 4.92 0.00 42.32 4.42
594 595 2.262915 CTCCTTCAGCTTCCGCGT 59.737 61.111 4.92 0.00 42.32 6.01
595 596 2.510238 CCTCCTTCAGCTTCCGCG 60.510 66.667 0.00 0.00 42.32 6.46
596 597 2.124942 CCCTCCTTCAGCTTCCGC 60.125 66.667 0.00 0.00 0.00 5.54
597 598 2.124942 GCCCTCCTTCAGCTTCCG 60.125 66.667 0.00 0.00 0.00 4.30
598 599 0.033699 ATTGCCCTCCTTCAGCTTCC 60.034 55.000 0.00 0.00 0.00 3.46
599 600 1.101331 CATTGCCCTCCTTCAGCTTC 58.899 55.000 0.00 0.00 0.00 3.86
600 601 0.324091 CCATTGCCCTCCTTCAGCTT 60.324 55.000 0.00 0.00 0.00 3.74
601 602 1.305623 CCATTGCCCTCCTTCAGCT 59.694 57.895 0.00 0.00 0.00 4.24
602 603 2.421399 GCCATTGCCCTCCTTCAGC 61.421 63.158 0.00 0.00 0.00 4.26
603 604 3.930504 GCCATTGCCCTCCTTCAG 58.069 61.111 0.00 0.00 0.00 3.02
613 614 0.179092 GCAATCAAGGAGGCCATTGC 60.179 55.000 17.40 17.40 43.10 3.56
614 615 1.407979 GAGCAATCAAGGAGGCCATTG 59.592 52.381 5.01 7.31 0.00 2.82
615 616 1.287146 AGAGCAATCAAGGAGGCCATT 59.713 47.619 5.01 0.00 0.00 3.16
616 617 0.924823 AGAGCAATCAAGGAGGCCAT 59.075 50.000 5.01 0.00 0.00 4.40
617 618 0.034767 CAGAGCAATCAAGGAGGCCA 60.035 55.000 5.01 0.00 0.00 5.36
618 619 0.254178 TCAGAGCAATCAAGGAGGCC 59.746 55.000 0.00 0.00 0.00 5.19
619 620 2.345124 ATCAGAGCAATCAAGGAGGC 57.655 50.000 0.00 0.00 0.00 4.70
620 621 4.686191 ACTATCAGAGCAATCAAGGAGG 57.314 45.455 0.00 0.00 0.00 4.30
621 622 5.668471 TGAACTATCAGAGCAATCAAGGAG 58.332 41.667 0.00 0.00 0.00 3.69
622 623 5.682234 TGAACTATCAGAGCAATCAAGGA 57.318 39.130 0.00 0.00 0.00 3.36
635 636 0.325296 AGGGACCGGCTGAACTATCA 60.325 55.000 0.00 0.00 0.00 2.15
636 637 0.105039 CAGGGACCGGCTGAACTATC 59.895 60.000 0.00 0.00 0.00 2.08
637 638 0.617820 ACAGGGACCGGCTGAACTAT 60.618 55.000 13.72 0.00 0.00 2.12
638 639 1.229082 ACAGGGACCGGCTGAACTA 60.229 57.895 13.72 0.00 0.00 2.24
639 640 2.526873 ACAGGGACCGGCTGAACT 60.527 61.111 13.72 0.00 0.00 3.01
640 641 2.047179 GACAGGGACCGGCTGAAC 60.047 66.667 13.72 4.69 0.00 3.18
641 642 2.203788 AGACAGGGACCGGCTGAA 60.204 61.111 13.72 0.00 0.00 3.02
642 643 2.997315 CAGACAGGGACCGGCTGA 60.997 66.667 13.72 0.00 0.00 4.26
643 644 3.302347 GACAGACAGGGACCGGCTG 62.302 68.421 0.00 3.18 0.00 4.85
644 645 2.997897 GACAGACAGGGACCGGCT 60.998 66.667 0.00 0.00 0.00 5.52
645 646 4.083862 GGACAGACAGGGACCGGC 62.084 72.222 0.00 0.00 0.00 6.13
646 647 3.760035 CGGACAGACAGGGACCGG 61.760 72.222 0.00 0.00 39.92 5.28
647 648 2.675423 TCGGACAGACAGGGACCG 60.675 66.667 0.00 0.00 44.09 4.79
648 649 1.186267 AACTCGGACAGACAGGGACC 61.186 60.000 0.00 0.00 0.00 4.46
649 650 0.680061 AAACTCGGACAGACAGGGAC 59.320 55.000 0.00 0.00 0.00 4.46
650 651 0.679505 CAAACTCGGACAGACAGGGA 59.320 55.000 0.00 0.00 0.00 4.20
651 652 0.679505 TCAAACTCGGACAGACAGGG 59.320 55.000 0.00 0.00 0.00 4.45
652 653 2.526304 TTCAAACTCGGACAGACAGG 57.474 50.000 0.00 0.00 0.00 4.00
653 654 5.060662 TCTATTCAAACTCGGACAGACAG 57.939 43.478 0.00 0.00 0.00 3.51
654 655 5.462530 TTCTATTCAAACTCGGACAGACA 57.537 39.130 0.00 0.00 0.00 3.41
655 656 6.237595 CGAATTCTATTCAAACTCGGACAGAC 60.238 42.308 3.52 0.00 0.00 3.51
656 657 5.805486 CGAATTCTATTCAAACTCGGACAGA 59.195 40.000 3.52 0.00 0.00 3.41
657 658 5.500931 GCGAATTCTATTCAAACTCGGACAG 60.501 44.000 3.52 0.00 0.00 3.51
658 659 4.328983 GCGAATTCTATTCAAACTCGGACA 59.671 41.667 3.52 0.00 0.00 4.02
659 660 4.328983 TGCGAATTCTATTCAAACTCGGAC 59.671 41.667 3.52 0.00 0.00 4.79
660 661 4.328983 GTGCGAATTCTATTCAAACTCGGA 59.671 41.667 3.52 0.00 0.00 4.55
661 662 4.578601 GTGCGAATTCTATTCAAACTCGG 58.421 43.478 3.52 0.00 0.00 4.63
662 663 4.201589 ACGTGCGAATTCTATTCAAACTCG 60.202 41.667 3.52 0.00 0.00 4.18
663 664 5.204673 ACGTGCGAATTCTATTCAAACTC 57.795 39.130 3.52 0.00 0.00 3.01
664 665 6.903883 ATACGTGCGAATTCTATTCAAACT 57.096 33.333 0.00 0.00 0.00 2.66
665 666 9.092322 CATTATACGTGCGAATTCTATTCAAAC 57.908 33.333 0.00 0.00 0.00 2.93
666 667 8.822855 ACATTATACGTGCGAATTCTATTCAAA 58.177 29.630 0.00 0.00 0.00 2.69
667 668 8.360325 ACATTATACGTGCGAATTCTATTCAA 57.640 30.769 0.00 0.00 0.00 2.69
668 669 7.940178 ACATTATACGTGCGAATTCTATTCA 57.060 32.000 0.00 0.00 0.00 2.57
669 670 8.908678 TGTACATTATACGTGCGAATTCTATTC 58.091 33.333 0.00 0.00 0.00 1.75
670 671 8.697067 GTGTACATTATACGTGCGAATTCTATT 58.303 33.333 0.00 0.00 0.00 1.73
671 672 7.060289 CGTGTACATTATACGTGCGAATTCTAT 59.940 37.037 0.00 0.00 38.29 1.98
672 673 6.357766 CGTGTACATTATACGTGCGAATTCTA 59.642 38.462 0.00 0.00 38.29 2.10
673 674 5.172591 CGTGTACATTATACGTGCGAATTCT 59.827 40.000 0.00 0.00 38.29 2.40
674 675 5.352302 CGTGTACATTATACGTGCGAATTC 58.648 41.667 0.00 0.00 38.29 2.17
675 676 4.317558 GCGTGTACATTATACGTGCGAATT 60.318 41.667 0.00 0.00 43.81 2.17
676 677 3.180980 GCGTGTACATTATACGTGCGAAT 59.819 43.478 0.00 0.00 43.81 3.34
677 678 2.531103 GCGTGTACATTATACGTGCGAA 59.469 45.455 0.00 0.00 43.81 4.70
678 679 2.110990 GCGTGTACATTATACGTGCGA 58.889 47.619 0.00 0.00 43.81 5.10
679 680 1.137367 CGCGTGTACATTATACGTGCG 60.137 52.381 0.00 0.00 44.29 5.34
680 681 2.531833 CGCGTGTACATTATACGTGC 57.468 50.000 0.00 0.00 44.29 5.34
682 683 1.114842 CGCGCGTGTACATTATACGT 58.885 50.000 24.19 0.00 43.81 3.57
683 684 0.179316 GCGCGCGTGTACATTATACG 60.179 55.000 32.35 5.74 44.58 3.06
684 685 0.179316 CGCGCGCGTGTACATTATAC 60.179 55.000 42.49 10.31 34.35 1.47
685 686 2.126503 CGCGCGCGTGTACATTATA 58.873 52.632 42.49 0.00 34.35 0.98
686 687 2.917901 CGCGCGCGTGTACATTAT 59.082 55.556 42.49 0.00 34.35 1.28
739 740 4.509737 GCGTGAGGGAGGCGTACC 62.510 72.222 0.00 0.00 0.00 3.34
740 741 3.450115 AGCGTGAGGGAGGCGTAC 61.450 66.667 0.00 0.00 40.57 3.67
755 756 2.343426 GGGTTTAGGCACCAGCAGC 61.343 63.158 0.00 0.00 44.61 5.25
759 760 3.829601 TGTTAATTGGGTTTAGGCACCAG 59.170 43.478 0.00 0.00 38.79 4.00
760 761 3.845860 TGTTAATTGGGTTTAGGCACCA 58.154 40.909 0.00 0.00 38.79 4.17
761 762 4.754322 CATGTTAATTGGGTTTAGGCACC 58.246 43.478 0.00 0.00 35.88 5.01
762 763 4.180817 GCATGTTAATTGGGTTTAGGCAC 58.819 43.478 0.00 0.00 0.00 5.01
763 764 3.834813 TGCATGTTAATTGGGTTTAGGCA 59.165 39.130 0.00 0.00 0.00 4.75
764 765 4.180817 GTGCATGTTAATTGGGTTTAGGC 58.819 43.478 0.00 0.00 0.00 3.93
792 793 8.795842 TCGGTTTTATTTGAGAAGGCTTATTA 57.204 30.769 0.00 0.00 0.00 0.98
793 794 7.393515 ACTCGGTTTTATTTGAGAAGGCTTATT 59.606 33.333 0.00 0.00 32.81 1.40
795 796 6.235664 ACTCGGTTTTATTTGAGAAGGCTTA 58.764 36.000 0.00 0.00 32.81 3.09
796 797 5.070685 ACTCGGTTTTATTTGAGAAGGCTT 58.929 37.500 0.00 0.00 32.81 4.35
797 798 4.652822 ACTCGGTTTTATTTGAGAAGGCT 58.347 39.130 0.00 0.00 32.81 4.58
798 799 5.372547 AACTCGGTTTTATTTGAGAAGGC 57.627 39.130 0.00 0.00 32.81 4.35
799 800 6.966021 TCAAACTCGGTTTTATTTGAGAAGG 58.034 36.000 0.03 0.00 36.42 3.46
801 802 7.801315 CGATTCAAACTCGGTTTTATTTGAGAA 59.199 33.333 0.00 0.00 40.93 2.87
802 803 7.171848 TCGATTCAAACTCGGTTTTATTTGAGA 59.828 33.333 0.00 0.00 40.93 3.27
803 804 7.295201 TCGATTCAAACTCGGTTTTATTTGAG 58.705 34.615 0.00 0.00 40.93 3.02
806 807 9.124807 GAATTCGATTCAAACTCGGTTTTATTT 57.875 29.630 0.00 0.00 39.09 1.40
808 809 7.094549 TGGAATTCGATTCAAACTCGGTTTTAT 60.095 33.333 0.00 0.00 41.03 1.40
809 810 6.205076 TGGAATTCGATTCAAACTCGGTTTTA 59.795 34.615 0.00 0.00 41.03 1.52
810 811 5.009210 TGGAATTCGATTCAAACTCGGTTTT 59.991 36.000 0.00 0.00 41.03 2.43
811 812 4.517453 TGGAATTCGATTCAAACTCGGTTT 59.483 37.500 0.00 0.00 41.03 3.27
812 813 4.069304 TGGAATTCGATTCAAACTCGGTT 58.931 39.130 0.00 0.00 41.03 4.44
813 814 3.670625 TGGAATTCGATTCAAACTCGGT 58.329 40.909 0.00 0.00 41.03 4.69
816 817 6.036735 TCGGTTATGGAATTCGATTCAAACTC 59.963 38.462 8.34 2.09 41.03 3.01
817 818 5.878116 TCGGTTATGGAATTCGATTCAAACT 59.122 36.000 8.34 0.00 41.03 2.66
820 821 5.424757 ACTCGGTTATGGAATTCGATTCAA 58.575 37.500 8.34 0.00 41.03 2.69
826 837 2.805845 ACGACTCGGTTATGGAATTCG 58.194 47.619 2.98 0.00 0.00 3.34
865 876 0.384477 GTAGATGGAGAGCGCGTACG 60.384 60.000 11.84 11.84 44.07 3.67
866 877 0.661552 TGTAGATGGAGAGCGCGTAC 59.338 55.000 8.43 1.75 0.00 3.67
867 878 1.605753 ATGTAGATGGAGAGCGCGTA 58.394 50.000 8.43 0.00 0.00 4.42
868 879 1.605753 TATGTAGATGGAGAGCGCGT 58.394 50.000 8.43 0.00 0.00 6.01
869 880 2.929531 ATATGTAGATGGAGAGCGCG 57.070 50.000 0.00 0.00 0.00 6.86
870 881 4.703645 TGTATATGTAGATGGAGAGCGC 57.296 45.455 0.00 0.00 0.00 5.92
871 882 6.038985 CCAATGTATATGTAGATGGAGAGCG 58.961 44.000 0.00 0.00 0.00 5.03
872 883 5.814705 GCCAATGTATATGTAGATGGAGAGC 59.185 44.000 0.00 0.00 0.00 4.09
873 884 6.939622 TGCCAATGTATATGTAGATGGAGAG 58.060 40.000 0.00 0.00 0.00 3.20
879 890 6.639563 TGCGTATGCCAATGTATATGTAGAT 58.360 36.000 4.05 0.00 41.78 1.98
920 938 4.021981 GGGAGAGATTGGTTTTGGTTTCTG 60.022 45.833 0.00 0.00 0.00 3.02
925 943 3.010250 GGTAGGGAGAGATTGGTTTTGGT 59.990 47.826 0.00 0.00 0.00 3.67
956 974 1.876156 GATGGATCGGCAAAAGCTAGG 59.124 52.381 0.00 0.00 0.00 3.02
964 982 1.143838 CGTGGAGATGGATCGGCAA 59.856 57.895 0.00 0.00 0.00 4.52
966 984 0.034059 AATCGTGGAGATGGATCGGC 59.966 55.000 0.00 0.00 40.02 5.54
968 986 4.122776 AGAAAAATCGTGGAGATGGATCG 58.877 43.478 0.00 0.00 40.02 3.69
969 987 4.210120 CGAGAAAAATCGTGGAGATGGATC 59.790 45.833 0.00 0.00 40.02 3.36
1071 1114 2.249557 CTTGATTCTTGCGCGCTGCT 62.250 55.000 33.29 12.25 46.63 4.24
1167 1213 0.864797 GGTAGACGACGCCGAATGTC 60.865 60.000 0.00 0.00 39.50 3.06
1407 1462 1.442769 GGACATGCTTGATGACGTGT 58.557 50.000 6.60 0.00 38.70 4.49
1490 1545 1.598183 CGAGACGATTCATCCTCCGTG 60.598 57.143 0.00 0.00 35.22 4.94
1492 1547 0.039978 CCGAGACGATTCATCCTCCG 60.040 60.000 0.00 0.00 0.00 4.63
1617 1673 3.379880 CCGACGGGGTTGGAGTAA 58.620 61.111 5.81 0.00 39.36 2.24
1662 1718 1.043116 AATCCGTGCATCCGAGGAGA 61.043 55.000 0.00 0.00 36.08 3.71
1686 1742 0.247460 CCCAAGAGTCGACATGCTCA 59.753 55.000 19.50 0.00 34.39 4.26
1752 1808 1.257750 CCGTGTCTGACCTCCCATGA 61.258 60.000 5.17 0.00 0.00 3.07
1854 1910 0.613012 AGCTTTCTGGTTGGCATCCC 60.613 55.000 11.95 4.51 0.00 3.85
2004 2060 3.869272 CACCGATGCTTGAGCGCC 61.869 66.667 2.29 0.00 45.83 6.53
2068 2124 0.095245 CGCCGTTGTAGATTGTGCTG 59.905 55.000 0.00 0.00 0.00 4.41
2069 2125 0.320421 ACGCCGTTGTAGATTGTGCT 60.320 50.000 0.00 0.00 0.00 4.40
2136 2193 6.607198 TCACACCTCATACAGACTCATTCATA 59.393 38.462 0.00 0.00 0.00 2.15
2138 2199 4.772100 TCACACCTCATACAGACTCATTCA 59.228 41.667 0.00 0.00 0.00 2.57
2147 2208 5.268118 TGCTTATCTCACACCTCATACAG 57.732 43.478 0.00 0.00 0.00 2.74
2168 2237 4.814234 TGTACACAGGAAAACTACTGCTTG 59.186 41.667 0.00 0.00 38.25 4.01
2175 2244 7.728148 TGTAGATTGTGTACACAGGAAAACTA 58.272 34.615 26.52 17.22 42.94 2.24
2180 2249 4.986034 CGTTGTAGATTGTGTACACAGGAA 59.014 41.667 26.52 14.47 42.94 3.36
2182 2251 3.678072 CCGTTGTAGATTGTGTACACAGG 59.322 47.826 26.52 17.55 42.94 4.00
2184 2253 3.061322 GCCGTTGTAGATTGTGTACACA 58.939 45.455 24.62 24.62 39.98 3.72
2185 2254 3.061322 TGCCGTTGTAGATTGTGTACAC 58.939 45.455 19.36 19.36 30.01 2.90
2186 2255 3.388345 TGCCGTTGTAGATTGTGTACA 57.612 42.857 0.00 0.00 0.00 2.90
2187 2256 4.939509 AATGCCGTTGTAGATTGTGTAC 57.060 40.909 0.00 0.00 0.00 2.90
2188 2257 4.998033 TCAAATGCCGTTGTAGATTGTGTA 59.002 37.500 0.00 0.00 0.00 2.90
2189 2258 3.818210 TCAAATGCCGTTGTAGATTGTGT 59.182 39.130 0.00 0.00 0.00 3.72
2190 2259 4.418013 TCAAATGCCGTTGTAGATTGTG 57.582 40.909 0.00 0.00 0.00 3.33
2191 2260 4.096382 GGATCAAATGCCGTTGTAGATTGT 59.904 41.667 0.00 0.00 0.00 2.71
2194 2263 3.884895 TGGATCAAATGCCGTTGTAGAT 58.115 40.909 0.00 0.00 0.00 1.98
2195 2264 3.342377 TGGATCAAATGCCGTTGTAGA 57.658 42.857 0.00 0.00 0.00 2.59
2196 2265 4.637483 AATGGATCAAATGCCGTTGTAG 57.363 40.909 0.00 0.00 32.36 2.74
2197 2266 5.398603 AAAATGGATCAAATGCCGTTGTA 57.601 34.783 0.00 0.00 33.82 2.41
2198 2267 3.959535 AAATGGATCAAATGCCGTTGT 57.040 38.095 0.00 0.00 33.82 3.32
2199 2268 5.868801 ACTAAAAATGGATCAAATGCCGTTG 59.131 36.000 0.00 0.00 33.82 4.10
2200 2269 5.868801 CACTAAAAATGGATCAAATGCCGTT 59.131 36.000 0.00 0.00 34.96 4.44
2203 2272 5.581874 CCACACTAAAAATGGATCAAATGCC 59.418 40.000 0.00 0.00 35.33 4.40
2204 2273 6.165577 ACCACACTAAAAATGGATCAAATGC 58.834 36.000 0.00 0.00 36.94 3.56
2205 2274 8.606040 AAACCACACTAAAAATGGATCAAATG 57.394 30.769 0.00 0.00 36.94 2.32
2206 2275 8.650490 AGAAACCACACTAAAAATGGATCAAAT 58.350 29.630 0.00 0.00 36.94 2.32
2207 2276 8.017418 AGAAACCACACTAAAAATGGATCAAA 57.983 30.769 0.00 0.00 36.94 2.69
2221 2290 3.503748 GCATAAGAGCAAGAAACCACACT 59.496 43.478 0.00 0.00 0.00 3.55
2241 2313 2.591923 TGTGGGAATTTGTGCTTAGCA 58.408 42.857 1.39 1.39 35.60 3.49
2242 2314 3.255642 TCTTGTGGGAATTTGTGCTTAGC 59.744 43.478 0.00 0.00 0.00 3.09
2243 2315 5.649782 ATCTTGTGGGAATTTGTGCTTAG 57.350 39.130 0.00 0.00 0.00 2.18
2245 2317 4.961438 AATCTTGTGGGAATTTGTGCTT 57.039 36.364 0.00 0.00 0.00 3.91
2246 2318 4.961438 AAATCTTGTGGGAATTTGTGCT 57.039 36.364 0.00 0.00 0.00 4.40
2248 2320 8.606040 ACAAATAAATCTTGTGGGAATTTGTG 57.394 30.769 9.10 0.00 41.78 3.33
2250 2322 9.270640 TGAACAAATAAATCTTGTGGGAATTTG 57.729 29.630 0.00 0.00 37.10 2.32
2251 2323 9.492973 CTGAACAAATAAATCTTGTGGGAATTT 57.507 29.630 0.00 0.00 37.10 1.82
2254 2326 7.595819 ACTGAACAAATAAATCTTGTGGGAA 57.404 32.000 0.00 0.00 37.10 3.97
2256 2328 8.661352 AAAACTGAACAAATAAATCTTGTGGG 57.339 30.769 0.00 0.00 37.10 4.61
2257 2329 9.533253 AGAAAACTGAACAAATAAATCTTGTGG 57.467 29.630 0.00 0.00 37.10 4.17
2260 2332 9.033481 TGCAGAAAACTGAACAAATAAATCTTG 57.967 29.630 0.00 0.00 0.00 3.02
2261 2333 9.598517 TTGCAGAAAACTGAACAAATAAATCTT 57.401 25.926 0.00 0.00 0.00 2.40
2268 2382 5.754890 GGATGTTGCAGAAAACTGAACAAAT 59.245 36.000 0.20 0.00 32.58 2.32
2275 2389 3.607775 CGTCTGGATGTTGCAGAAAACTG 60.608 47.826 0.02 0.00 46.30 3.16
2282 2396 0.806868 AATGCGTCTGGATGTTGCAG 59.193 50.000 0.00 0.00 39.17 4.41
2317 2451 1.600957 CTGATAATCTGTTGGCTGGCG 59.399 52.381 0.00 0.00 0.00 5.69
2321 2455 3.895232 ACGTCTGATAATCTGTTGGCT 57.105 42.857 0.00 0.00 0.00 4.75
2330 2469 0.313043 CGGCGGGTACGTCTGATAAT 59.687 55.000 0.00 0.00 43.91 1.28
2364 2506 1.303236 CGAGTGGGTCAATGGGCAA 60.303 57.895 0.00 0.00 0.00 4.52
2370 2512 4.778143 GCCGCCGAGTGGGTCAAT 62.778 66.667 5.77 0.00 38.44 2.57



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.