Multiple sequence alignment - TraesCS1D01G385200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G385200 chr1D 100.000 5983 0 0 1 5983 458683258 458677276 0.000000e+00 11049.0
1 TraesCS1D01G385200 chr1D 87.247 792 65 15 2428 3211 458722540 458721777 0.000000e+00 870.0
2 TraesCS1D01G385200 chr1D 85.628 661 64 20 1760 2408 458723308 458722667 0.000000e+00 665.0
3 TraesCS1D01G385200 chr1D 92.857 196 12 2 1350 1543 446663918 446663723 3.530000e-72 283.0
4 TraesCS1D01G385200 chr1D 83.333 120 19 1 22 140 487025220 487025339 6.340000e-20 110.0
5 TraesCS1D01G385200 chr1D 95.082 61 1 2 10 69 270280036 270279977 1.780000e-15 95.3
6 TraesCS1D01G385200 chr1D 86.076 79 10 1 145 223 404971765 404971842 3.840000e-12 84.2
7 TraesCS1D01G385200 chr1B 92.726 4262 191 46 1757 5983 630065783 630061606 0.000000e+00 6043.0
8 TraesCS1D01G385200 chr1B 90.767 834 41 14 599 1411 630066924 630066106 0.000000e+00 1081.0
9 TraesCS1D01G385200 chr1B 85.572 1005 91 32 1762 2747 630259094 630258125 0.000000e+00 1003.0
10 TraesCS1D01G385200 chr1B 86.864 609 55 11 938 1543 52303224 52302638 0.000000e+00 658.0
11 TraesCS1D01G385200 chr1B 86.469 473 36 11 2746 3215 630258001 630257554 1.500000e-135 494.0
12 TraesCS1D01G385200 chr1B 84.512 297 20 10 1483 1761 630066103 630065815 2.750000e-68 270.0
13 TraesCS1D01G385200 chr1B 82.833 233 30 7 1318 1540 630259472 630259240 3.660000e-47 200.0
14 TraesCS1D01G385200 chr1B 80.645 124 21 3 21 143 586610133 586610254 6.380000e-15 93.5
15 TraesCS1D01G385200 chr1B 83.673 98 15 1 145 242 42186273 42186369 2.300000e-14 91.6
16 TraesCS1D01G385200 chr1B 94.000 50 3 0 1541 1590 52302612 52302563 6.430000e-10 76.8
17 TraesCS1D01G385200 chr1A 93.594 3778 158 40 2248 5983 551054024 551050289 0.000000e+00 5559.0
18 TraesCS1D01G385200 chr1A 85.394 1116 88 38 599 1670 551055828 551054744 0.000000e+00 1088.0
19 TraesCS1D01G385200 chr1A 87.616 646 54 15 1762 2399 551149702 551149075 0.000000e+00 726.0
20 TraesCS1D01G385200 chr1A 84.430 745 63 26 2475 3213 551149038 551148341 0.000000e+00 684.0
21 TraesCS1D01G385200 chr1A 90.090 444 38 4 1757 2200 551054478 551054041 6.730000e-159 571.0
22 TraesCS1D01G385200 chr1A 88.796 357 30 7 941 1297 239393717 239394063 4.280000e-116 429.0
23 TraesCS1D01G385200 chr1A 95.775 71 3 0 1691 1761 551054581 551054511 1.360000e-21 115.0
24 TraesCS1D01G385200 chr1A 84.810 79 11 1 145 223 250488262 250488339 1.790000e-10 78.7
25 TraesCS1D01G385200 chr3D 90.579 605 45 9 941 1543 52182977 52182383 0.000000e+00 791.0
26 TraesCS1D01G385200 chr3D 94.000 50 3 0 1541 1590 52182357 52182308 6.430000e-10 76.8
27 TraesCS1D01G385200 chr2D 90.476 609 44 11 938 1543 333354391 333353794 0.000000e+00 791.0
28 TraesCS1D01G385200 chr2D 94.000 50 3 0 1541 1590 333353768 333353719 6.430000e-10 76.8
29 TraesCS1D01G385200 chr6A 85.785 605 57 16 941 1543 152802578 152803155 1.100000e-171 614.0
30 TraesCS1D01G385200 chr6A 80.808 99 16 3 145 242 53584949 53585045 2.310000e-09 75.0
31 TraesCS1D01G385200 chr4D 84.124 548 70 12 2620 3159 278187321 278186783 1.150000e-141 514.0
32 TraesCS1D01G385200 chr4D 85.714 112 14 2 21 131 507000388 507000278 3.790000e-22 117.0
33 TraesCS1D01G385200 chr5A 89.722 360 25 8 941 1300 595670182 595669835 3.290000e-122 449.0
34 TraesCS1D01G385200 chr5A 84.034 119 15 2 24 138 26478752 26478634 1.760000e-20 111.0
35 TraesCS1D01G385200 chr5A 89.024 82 8 1 6 86 182588689 182588770 3.820000e-17 100.0
36 TraesCS1D01G385200 chr5A 86.585 82 10 1 145 226 41047393 41047313 8.260000e-14 89.8
37 TraesCS1D01G385200 chr5A 90.196 51 5 0 5205 5255 230821164 230821214 3.870000e-07 67.6
38 TraesCS1D01G385200 chr5A 90.196 51 5 0 5205 5255 230850037 230850087 3.870000e-07 67.6
39 TraesCS1D01G385200 chr5A 88.889 54 6 0 5205 5258 593731458 593731405 3.870000e-07 67.6
40 TraesCS1D01G385200 chrUn 89.607 356 27 7 942 1297 1840052 1840397 1.530000e-120 444.0
41 TraesCS1D01G385200 chr7B 88.796 357 29 7 941 1297 594099197 594099542 1.540000e-115 427.0
42 TraesCS1D01G385200 chr7B 88.889 108 10 2 22 128 649258741 649258847 1.350000e-26 132.0
43 TraesCS1D01G385200 chr7B 85.366 82 11 1 145 226 480642272 480642192 3.840000e-12 84.2
44 TraesCS1D01G385200 chr7B 86.076 79 10 1 145 223 703258468 703258391 3.840000e-12 84.2
45 TraesCS1D01G385200 chr7B 90.196 51 5 0 5205 5255 659430399 659430449 3.870000e-07 67.6
46 TraesCS1D01G385200 chr5B 80.874 549 83 15 2629 3164 84734770 84734231 4.310000e-111 412.0
47 TraesCS1D01G385200 chr7D 93.846 195 10 2 1351 1543 67748207 67748013 5.860000e-75 292.0
48 TraesCS1D01G385200 chr7D 93.434 198 11 2 1348 1543 490747993 490747796 5.860000e-75 292.0
49 TraesCS1D01G385200 chr7D 88.571 105 12 0 2096 2200 104221522 104221418 1.750000e-25 128.0
50 TraesCS1D01G385200 chr7D 86.441 118 14 2 11 127 581402802 581402918 1.750000e-25 128.0
51 TraesCS1D01G385200 chr5D 92.424 198 13 2 1348 1543 546417424 546417621 1.270000e-71 281.0
52 TraesCS1D01G385200 chr2B 79.412 408 64 14 2096 2489 73982449 73982850 2.750000e-68 270.0
53 TraesCS1D01G385200 chr3A 77.719 377 63 11 2096 2457 648181617 648181987 1.690000e-50 211.0
54 TraesCS1D01G385200 chr4B 80.833 120 20 3 27 144 165425212 165425094 2.300000e-14 91.6
55 TraesCS1D01G385200 chr4B 88.889 54 6 0 5205 5258 553913556 553913503 3.870000e-07 67.6
56 TraesCS1D01G385200 chr3B 86.076 79 10 1 145 223 749488846 749488769 3.840000e-12 84.2
57 TraesCS1D01G385200 chr3B 85.000 80 11 1 144 223 819216198 819216120 4.970000e-11 80.5
58 TraesCS1D01G385200 chr7A 90.196 51 5 0 5205 5255 64934649 64934699 3.870000e-07 67.6
59 TraesCS1D01G385200 chr7A 88.889 54 6 0 5205 5258 318403247 318403194 3.870000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G385200 chr1D 458677276 458683258 5982 True 11049.000000 11049 100.00000 1 5983 1 chr1D.!!$R3 5982
1 TraesCS1D01G385200 chr1D 458721777 458723308 1531 True 767.500000 870 86.43750 1760 3211 2 chr1D.!!$R4 1451
2 TraesCS1D01G385200 chr1B 630061606 630066924 5318 True 2464.666667 6043 89.33500 599 5983 3 chr1B.!!$R2 5384
3 TraesCS1D01G385200 chr1B 630257554 630259472 1918 True 565.666667 1003 84.95800 1318 3215 3 chr1B.!!$R3 1897
4 TraesCS1D01G385200 chr1B 52302563 52303224 661 True 367.400000 658 90.43200 938 1590 2 chr1B.!!$R1 652
5 TraesCS1D01G385200 chr1A 551050289 551055828 5539 True 1833.250000 5559 91.21325 599 5983 4 chr1A.!!$R1 5384
6 TraesCS1D01G385200 chr1A 551148341 551149702 1361 True 705.000000 726 86.02300 1762 3213 2 chr1A.!!$R2 1451
7 TraesCS1D01G385200 chr3D 52182308 52182977 669 True 433.900000 791 92.28950 941 1590 2 chr3D.!!$R1 649
8 TraesCS1D01G385200 chr2D 333353719 333354391 672 True 433.900000 791 92.23800 938 1590 2 chr2D.!!$R1 652
9 TraesCS1D01G385200 chr6A 152802578 152803155 577 False 614.000000 614 85.78500 941 1543 1 chr6A.!!$F2 602
10 TraesCS1D01G385200 chr4D 278186783 278187321 538 True 514.000000 514 84.12400 2620 3159 1 chr4D.!!$R1 539
11 TraesCS1D01G385200 chr5B 84734231 84734770 539 True 412.000000 412 80.87400 2629 3164 1 chr5B.!!$R1 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
531 532 0.034767 TAGAGAGGGCGAACGAAGGA 60.035 55.000 0.00 0.00 0.00 3.36 F
537 538 0.108329 GGGCGAACGAAGGATCTCAA 60.108 55.000 0.00 0.00 0.00 3.02 F
576 577 0.176910 CCCCAAAACAAAACGGTGCT 59.823 50.000 0.00 0.00 0.00 4.40 F
580 581 0.534873 AAAACAAAACGGTGCTGCCT 59.465 45.000 0.00 0.00 34.25 4.75 F
582 583 0.534873 AACAAAACGGTGCTGCCTTT 59.465 45.000 0.00 0.00 34.25 3.11 F
1598 1687 0.541863 CTAGAGTGTTCCCGGCCAAT 59.458 55.000 2.24 0.00 0.00 3.16 F
1625 1714 0.771127 TGGGTTGACTTGCTAGGCTT 59.229 50.000 1.86 0.00 0.00 4.35 F
1857 2151 1.076350 CCCTGTTGGTACCCCATTTCA 59.924 52.381 10.07 0.00 41.49 2.69 F
3667 4225 0.937304 CCTTGTTGATATCCCACGCG 59.063 55.000 3.53 3.53 0.00 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2086 2382 0.395311 CTCCCAGGATGTGCAGCATT 60.395 55.000 0.00 0.0 38.06 3.56 R
2109 2405 2.846206 ACAATCAACCCTAGCCATCAGA 59.154 45.455 0.00 0.0 0.00 3.27 R
2289 2588 3.003897 GGCAATAACAAACAGGACAACGA 59.996 43.478 0.00 0.0 0.00 3.85 R
2290 2589 3.243234 TGGCAATAACAAACAGGACAACG 60.243 43.478 0.00 0.0 0.00 4.10 R
2325 2625 6.093219 CACATGAGAAGAACCTCCTGTATTTG 59.907 42.308 0.00 0.0 39.09 2.32 R
2656 3074 6.152661 CCTTTCCAGTTGCTTATTTATCCACA 59.847 38.462 0.00 0.0 0.00 4.17 R
3497 4055 7.012327 TCCAACAATTTAGAACTGTCTTGTGAG 59.988 37.037 0.00 0.0 35.12 3.51 R
3749 4307 4.614535 GCAAAGTATGGTCTGCTCACAAAG 60.615 45.833 0.00 0.0 0.00 2.77 R
5383 5965 0.237235 GTTGCTCGACAATTCGCCAA 59.763 50.000 4.21 0.0 45.46 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.780924 TTCCAGCCCAACCCCTGT 60.781 61.111 0.00 0.00 0.00 4.00
18 19 2.399607 TTCCAGCCCAACCCCTGTT 61.400 57.895 0.00 0.00 34.14 3.16
19 20 1.955458 TTCCAGCCCAACCCCTGTTT 61.955 55.000 0.00 0.00 30.42 2.83
20 21 1.908299 CCAGCCCAACCCCTGTTTC 60.908 63.158 0.00 0.00 30.42 2.78
21 22 2.115266 AGCCCAACCCCTGTTTCG 59.885 61.111 0.00 0.00 30.42 3.46
22 23 2.114411 GCCCAACCCCTGTTTCGA 59.886 61.111 0.00 0.00 30.42 3.71
23 24 1.304134 GCCCAACCCCTGTTTCGAT 60.304 57.895 0.00 0.00 30.42 3.59
24 25 1.595093 GCCCAACCCCTGTTTCGATG 61.595 60.000 0.00 0.00 30.42 3.84
25 26 0.037590 CCCAACCCCTGTTTCGATGA 59.962 55.000 0.00 0.00 30.42 2.92
26 27 1.340991 CCCAACCCCTGTTTCGATGAT 60.341 52.381 0.00 0.00 30.42 2.45
27 28 1.745087 CCAACCCCTGTTTCGATGATG 59.255 52.381 0.00 0.00 30.42 3.07
28 29 1.133025 CAACCCCTGTTTCGATGATGC 59.867 52.381 0.00 0.00 30.42 3.91
29 30 0.744414 ACCCCTGTTTCGATGATGCG 60.744 55.000 0.00 0.00 0.00 4.73
30 31 0.744414 CCCCTGTTTCGATGATGCGT 60.744 55.000 0.00 0.00 0.00 5.24
31 32 0.652592 CCCTGTTTCGATGATGCGTC 59.347 55.000 0.00 0.00 0.00 5.19
32 33 1.645034 CCTGTTTCGATGATGCGTCT 58.355 50.000 7.58 0.00 0.00 4.18
33 34 2.481276 CCCTGTTTCGATGATGCGTCTA 60.481 50.000 7.58 0.00 0.00 2.59
34 35 2.791560 CCTGTTTCGATGATGCGTCTAG 59.208 50.000 7.58 0.00 0.00 2.43
46 47 3.258225 CGTCTAGCATCGTTGGAGG 57.742 57.895 0.00 0.00 0.00 4.30
47 48 0.249073 CGTCTAGCATCGTTGGAGGG 60.249 60.000 0.00 0.00 0.00 4.30
48 49 0.530870 GTCTAGCATCGTTGGAGGGC 60.531 60.000 0.00 0.00 0.00 5.19
49 50 1.592669 CTAGCATCGTTGGAGGGCG 60.593 63.158 0.00 0.00 33.15 6.13
50 51 2.298158 CTAGCATCGTTGGAGGGCGT 62.298 60.000 0.00 0.00 33.15 5.68
51 52 2.572095 TAGCATCGTTGGAGGGCGTG 62.572 60.000 0.00 0.00 33.15 5.34
52 53 2.047274 CATCGTTGGAGGGCGTGT 60.047 61.111 0.00 0.00 0.00 4.49
53 54 2.047274 ATCGTTGGAGGGCGTGTG 60.047 61.111 0.00 0.00 0.00 3.82
54 55 3.605749 ATCGTTGGAGGGCGTGTGG 62.606 63.158 0.00 0.00 0.00 4.17
63 64 4.250305 GGCGTGTGGGGTGTGTCT 62.250 66.667 0.00 0.00 0.00 3.41
64 65 2.665185 GCGTGTGGGGTGTGTCTC 60.665 66.667 0.00 0.00 0.00 3.36
65 66 2.030562 CGTGTGGGGTGTGTCTCC 59.969 66.667 0.00 0.00 37.17 3.71
66 67 2.802724 CGTGTGGGGTGTGTCTCCA 61.803 63.158 0.00 0.00 45.78 3.86
69 70 3.625897 TGGGGTGTGTCTCCAGCG 61.626 66.667 0.00 0.00 42.62 5.18
70 71 4.394712 GGGGTGTGTCTCCAGCGG 62.395 72.222 0.00 0.00 36.51 5.52
71 72 3.311110 GGGTGTGTCTCCAGCGGA 61.311 66.667 0.00 0.00 33.69 5.54
72 73 2.660064 GGGTGTGTCTCCAGCGGAT 61.660 63.158 0.00 0.00 33.69 4.18
73 74 1.153549 GGTGTGTCTCCAGCGGATC 60.154 63.158 0.00 0.00 0.00 3.36
74 75 1.608717 GGTGTGTCTCCAGCGGATCT 61.609 60.000 0.00 0.00 0.00 2.75
75 76 0.179124 GTGTGTCTCCAGCGGATCTC 60.179 60.000 0.00 0.00 0.00 2.75
76 77 1.064946 GTGTCTCCAGCGGATCTCG 59.935 63.158 0.00 0.00 42.76 4.04
85 86 2.429236 CGGATCTCGCGGGATTCG 60.429 66.667 33.25 33.25 38.18 3.34
86 87 2.904676 CGGATCTCGCGGGATTCGA 61.905 63.158 40.17 5.03 44.78 3.71
87 88 1.587054 GGATCTCGCGGGATTCGAT 59.413 57.895 24.71 0.00 42.43 3.59
88 89 0.456995 GGATCTCGCGGGATTCGATC 60.457 60.000 24.71 10.74 42.43 3.69
89 90 0.241213 GATCTCGCGGGATTCGATCA 59.759 55.000 24.71 0.00 42.43 2.92
90 91 0.039074 ATCTCGCGGGATTCGATCAC 60.039 55.000 17.66 0.00 42.43 3.06
91 92 1.101635 TCTCGCGGGATTCGATCACT 61.102 55.000 3.45 0.00 42.43 3.41
92 93 0.591659 CTCGCGGGATTCGATCACTA 59.408 55.000 0.00 0.00 42.43 2.74
93 94 1.200252 CTCGCGGGATTCGATCACTAT 59.800 52.381 0.00 0.00 42.43 2.12
94 95 1.611977 TCGCGGGATTCGATCACTATT 59.388 47.619 6.13 0.00 42.43 1.73
95 96 1.721389 CGCGGGATTCGATCACTATTG 59.279 52.381 0.00 0.00 42.43 1.90
96 97 2.069273 GCGGGATTCGATCACTATTGG 58.931 52.381 0.00 0.00 42.43 3.16
97 98 2.548067 GCGGGATTCGATCACTATTGGT 60.548 50.000 0.00 0.00 42.43 3.67
98 99 3.318017 CGGGATTCGATCACTATTGGTC 58.682 50.000 0.00 0.00 42.43 4.02
99 100 3.005897 CGGGATTCGATCACTATTGGTCT 59.994 47.826 0.00 0.00 42.43 3.85
100 101 4.501571 CGGGATTCGATCACTATTGGTCTT 60.502 45.833 0.00 0.00 42.43 3.01
101 102 4.991687 GGGATTCGATCACTATTGGTCTTC 59.008 45.833 0.00 0.00 29.58 2.87
102 103 4.681942 GGATTCGATCACTATTGGTCTTCG 59.318 45.833 0.00 0.00 29.58 3.79
103 104 3.710326 TCGATCACTATTGGTCTTCGG 57.290 47.619 0.00 0.00 33.10 4.30
104 105 3.021695 TCGATCACTATTGGTCTTCGGT 58.978 45.455 0.00 0.00 33.10 4.69
105 106 3.116300 CGATCACTATTGGTCTTCGGTG 58.884 50.000 0.00 0.00 29.58 4.94
106 107 3.181490 CGATCACTATTGGTCTTCGGTGA 60.181 47.826 0.00 0.00 37.94 4.02
107 108 4.676986 CGATCACTATTGGTCTTCGGTGAA 60.677 45.833 0.00 0.00 37.28 3.18
108 109 4.819105 TCACTATTGGTCTTCGGTGAAT 57.181 40.909 0.00 0.00 31.99 2.57
109 110 4.755411 TCACTATTGGTCTTCGGTGAATC 58.245 43.478 0.00 0.00 31.99 2.52
110 111 4.466370 TCACTATTGGTCTTCGGTGAATCT 59.534 41.667 0.00 0.00 31.99 2.40
111 112 5.655090 TCACTATTGGTCTTCGGTGAATCTA 59.345 40.000 0.00 0.00 31.99 1.98
112 113 6.323996 TCACTATTGGTCTTCGGTGAATCTAT 59.676 38.462 0.00 0.00 31.99 1.98
113 114 6.986817 CACTATTGGTCTTCGGTGAATCTATT 59.013 38.462 0.00 0.00 0.00 1.73
114 115 7.495934 CACTATTGGTCTTCGGTGAATCTATTT 59.504 37.037 0.00 0.00 0.00 1.40
115 116 6.683974 ATTGGTCTTCGGTGAATCTATTTG 57.316 37.500 0.00 0.00 0.00 2.32
116 117 4.513442 TGGTCTTCGGTGAATCTATTTGG 58.487 43.478 0.00 0.00 0.00 3.28
117 118 4.224147 TGGTCTTCGGTGAATCTATTTGGA 59.776 41.667 0.00 0.00 0.00 3.53
118 119 5.104527 TGGTCTTCGGTGAATCTATTTGGAT 60.105 40.000 0.00 0.00 0.00 3.41
119 120 5.467063 GGTCTTCGGTGAATCTATTTGGATC 59.533 44.000 0.00 0.00 0.00 3.36
120 121 6.284459 GTCTTCGGTGAATCTATTTGGATCT 58.716 40.000 0.00 0.00 0.00 2.75
121 122 7.434492 GTCTTCGGTGAATCTATTTGGATCTA 58.566 38.462 0.00 0.00 0.00 1.98
122 123 7.596995 GTCTTCGGTGAATCTATTTGGATCTAG 59.403 40.741 0.00 0.00 0.00 2.43
123 124 6.978674 TCGGTGAATCTATTTGGATCTAGT 57.021 37.500 0.00 0.00 0.00 2.57
124 125 6.982852 TCGGTGAATCTATTTGGATCTAGTC 58.017 40.000 0.00 0.00 0.00 2.59
125 126 6.778069 TCGGTGAATCTATTTGGATCTAGTCT 59.222 38.462 0.00 0.00 0.00 3.24
126 127 7.287927 TCGGTGAATCTATTTGGATCTAGTCTT 59.712 37.037 0.00 0.00 0.00 3.01
127 128 7.928706 CGGTGAATCTATTTGGATCTAGTCTTT 59.071 37.037 0.00 0.00 0.00 2.52
137 138 8.928270 TTTGGATCTAGTCTTTATTCGTCTTC 57.072 34.615 0.00 0.00 0.00 2.87
138 139 6.726230 TGGATCTAGTCTTTATTCGTCTTCG 58.274 40.000 0.00 0.00 38.55 3.79
139 140 6.318144 TGGATCTAGTCTTTATTCGTCTTCGT 59.682 38.462 0.00 0.00 38.33 3.85
140 141 7.148120 TGGATCTAGTCTTTATTCGTCTTCGTT 60.148 37.037 0.00 0.00 38.33 3.85
141 142 7.701501 GGATCTAGTCTTTATTCGTCTTCGTTT 59.298 37.037 0.00 0.00 38.33 3.60
142 143 9.713740 GATCTAGTCTTTATTCGTCTTCGTTTA 57.286 33.333 0.00 0.00 38.33 2.01
146 147 8.626093 AGTCTTTATTCGTCTTCGTTTATACC 57.374 34.615 0.00 0.00 38.33 2.73
147 148 8.465201 AGTCTTTATTCGTCTTCGTTTATACCT 58.535 33.333 0.00 0.00 38.33 3.08
148 149 9.080915 GTCTTTATTCGTCTTCGTTTATACCTT 57.919 33.333 0.00 0.00 38.33 3.50
151 152 8.566008 TTATTCGTCTTCGTTTATACCTTAGC 57.434 34.615 0.00 0.00 38.33 3.09
152 153 5.565592 TCGTCTTCGTTTATACCTTAGCA 57.434 39.130 0.00 0.00 38.33 3.49
153 154 5.335127 TCGTCTTCGTTTATACCTTAGCAC 58.665 41.667 0.00 0.00 38.33 4.40
154 155 4.203764 CGTCTTCGTTTATACCTTAGCACG 59.796 45.833 0.00 0.00 0.00 5.34
155 156 5.335127 GTCTTCGTTTATACCTTAGCACGA 58.665 41.667 0.00 0.00 35.00 4.35
156 157 5.228843 GTCTTCGTTTATACCTTAGCACGAC 59.771 44.000 0.00 0.00 36.45 4.34
157 158 3.683989 TCGTTTATACCTTAGCACGACG 58.316 45.455 0.00 0.00 32.01 5.12
158 159 3.373748 TCGTTTATACCTTAGCACGACGA 59.626 43.478 0.00 0.00 35.04 4.20
159 160 3.479949 CGTTTATACCTTAGCACGACGAC 59.520 47.826 0.00 0.00 0.00 4.34
160 161 4.666237 GTTTATACCTTAGCACGACGACT 58.334 43.478 0.00 0.59 0.00 4.18
161 162 4.970662 TTATACCTTAGCACGACGACTT 57.029 40.909 0.00 0.00 0.00 3.01
162 163 3.863142 ATACCTTAGCACGACGACTTT 57.137 42.857 0.00 0.00 0.00 2.66
163 164 2.061740 ACCTTAGCACGACGACTTTC 57.938 50.000 0.00 0.00 0.00 2.62
164 165 1.336609 ACCTTAGCACGACGACTTTCC 60.337 52.381 0.00 0.00 0.00 3.13
165 166 0.982673 CTTAGCACGACGACTTTCCG 59.017 55.000 0.00 0.00 0.00 4.30
166 167 0.592637 TTAGCACGACGACTTTCCGA 59.407 50.000 0.00 0.00 0.00 4.55
167 168 0.110056 TAGCACGACGACTTTCCGAC 60.110 55.000 0.00 0.00 0.00 4.79
168 169 1.371389 GCACGACGACTTTCCGACT 60.371 57.895 0.00 0.00 0.00 4.18
169 170 1.606350 GCACGACGACTTTCCGACTG 61.606 60.000 0.00 0.00 0.00 3.51
170 171 0.317603 CACGACGACTTTCCGACTGT 60.318 55.000 0.00 0.00 0.00 3.55
171 172 0.040603 ACGACGACTTTCCGACTGTC 60.041 55.000 0.00 0.00 0.00 3.51
172 173 0.040692 CGACGACTTTCCGACTGTCA 60.041 55.000 8.73 0.00 0.00 3.58
173 174 1.598676 CGACGACTTTCCGACTGTCAA 60.599 52.381 8.73 0.00 0.00 3.18
174 175 1.785430 GACGACTTTCCGACTGTCAAC 59.215 52.381 8.73 0.00 0.00 3.18
175 176 1.137513 CGACTTTCCGACTGTCAACC 58.862 55.000 8.73 0.00 0.00 3.77
176 177 1.537348 CGACTTTCCGACTGTCAACCA 60.537 52.381 8.73 0.00 0.00 3.67
177 178 1.865340 GACTTTCCGACTGTCAACCAC 59.135 52.381 8.73 0.00 0.00 4.16
178 179 1.208535 ACTTTCCGACTGTCAACCACA 59.791 47.619 8.73 0.00 0.00 4.17
179 180 2.285083 CTTTCCGACTGTCAACCACAA 58.715 47.619 8.73 0.00 33.31 3.33
180 181 1.658994 TTCCGACTGTCAACCACAAC 58.341 50.000 8.73 0.00 33.31 3.32
181 182 0.537653 TCCGACTGTCAACCACAACA 59.462 50.000 8.73 0.00 33.31 3.33
182 183 0.655733 CCGACTGTCAACCACAACAC 59.344 55.000 8.73 0.00 33.31 3.32
183 184 0.300491 CGACTGTCAACCACAACACG 59.700 55.000 8.73 0.00 33.31 4.49
184 185 1.365699 GACTGTCAACCACAACACGT 58.634 50.000 2.24 0.00 33.31 4.49
185 186 1.735571 GACTGTCAACCACAACACGTT 59.264 47.619 2.24 0.00 33.31 3.99
186 187 2.156098 ACTGTCAACCACAACACGTTT 58.844 42.857 0.00 0.00 33.31 3.60
187 188 2.554893 ACTGTCAACCACAACACGTTTT 59.445 40.909 0.00 0.00 33.31 2.43
188 189 2.914214 CTGTCAACCACAACACGTTTTG 59.086 45.455 12.74 12.74 33.31 2.44
189 190 2.552743 TGTCAACCACAACACGTTTTGA 59.447 40.909 20.62 2.14 29.30 2.69
190 191 2.912345 GTCAACCACAACACGTTTTGAC 59.088 45.455 20.62 9.98 39.30 3.18
191 192 2.095161 TCAACCACAACACGTTTTGACC 60.095 45.455 20.62 0.00 0.00 4.02
192 193 0.812549 ACCACAACACGTTTTGACCC 59.187 50.000 20.62 0.00 0.00 4.46
193 194 0.248296 CCACAACACGTTTTGACCCG 60.248 55.000 20.62 6.27 0.00 5.28
194 195 0.248296 CACAACACGTTTTGACCCGG 60.248 55.000 20.62 0.00 0.00 5.73
195 196 1.298788 CAACACGTTTTGACCCGGC 60.299 57.895 8.78 0.00 0.00 6.13
196 197 1.452470 AACACGTTTTGACCCGGCT 60.452 52.632 0.00 0.00 0.00 5.52
197 198 1.441732 AACACGTTTTGACCCGGCTC 61.442 55.000 0.00 0.00 0.00 4.70
198 199 2.281276 ACGTTTTGACCCGGCTCC 60.281 61.111 0.00 0.00 0.00 4.70
199 200 2.281208 CGTTTTGACCCGGCTCCA 60.281 61.111 0.00 0.00 0.00 3.86
200 201 1.674322 CGTTTTGACCCGGCTCCAT 60.674 57.895 0.00 0.00 0.00 3.41
201 202 1.241315 CGTTTTGACCCGGCTCCATT 61.241 55.000 0.00 0.00 0.00 3.16
202 203 0.243636 GTTTTGACCCGGCTCCATTG 59.756 55.000 0.00 0.00 0.00 2.82
203 204 0.111446 TTTTGACCCGGCTCCATTGA 59.889 50.000 0.00 0.00 0.00 2.57
204 205 0.322456 TTTGACCCGGCTCCATTGAG 60.322 55.000 0.00 0.00 41.84 3.02
205 206 1.198094 TTGACCCGGCTCCATTGAGA 61.198 55.000 0.00 0.00 41.42 3.27
206 207 1.144936 GACCCGGCTCCATTGAGAG 59.855 63.158 0.00 0.00 41.42 3.20
207 208 1.306141 ACCCGGCTCCATTGAGAGA 60.306 57.895 0.00 0.00 41.42 3.10
208 209 1.333636 ACCCGGCTCCATTGAGAGAG 61.334 60.000 0.00 0.00 41.42 3.20
209 210 1.445095 CCGGCTCCATTGAGAGAGG 59.555 63.158 0.00 0.00 41.42 3.69
210 211 1.333636 CCGGCTCCATTGAGAGAGGT 61.334 60.000 0.00 0.00 41.42 3.85
211 212 0.179089 CGGCTCCATTGAGAGAGGTG 60.179 60.000 0.00 0.00 41.42 4.00
212 213 0.463474 GGCTCCATTGAGAGAGGTGC 60.463 60.000 0.00 0.00 41.42 5.01
213 214 0.809241 GCTCCATTGAGAGAGGTGCG 60.809 60.000 0.00 0.00 41.42 5.34
214 215 0.820226 CTCCATTGAGAGAGGTGCGA 59.180 55.000 0.00 0.00 41.42 5.10
215 216 1.411977 CTCCATTGAGAGAGGTGCGAT 59.588 52.381 0.00 0.00 41.42 4.58
216 217 1.137675 TCCATTGAGAGAGGTGCGATG 59.862 52.381 0.00 0.00 0.00 3.84
217 218 1.137675 CCATTGAGAGAGGTGCGATGA 59.862 52.381 0.00 0.00 0.00 2.92
218 219 2.200067 CATTGAGAGAGGTGCGATGAC 58.800 52.381 0.00 0.00 0.00 3.06
219 220 0.171231 TTGAGAGAGGTGCGATGACG 59.829 55.000 0.00 0.00 42.93 4.35
220 221 1.064946 GAGAGAGGTGCGATGACGG 59.935 63.158 0.00 0.00 40.15 4.79
221 222 2.583593 GAGAGGTGCGATGACGGC 60.584 66.667 0.00 0.00 40.15 5.68
222 223 4.498520 AGAGGTGCGATGACGGCG 62.499 66.667 4.80 4.80 40.15 6.46
223 224 4.492160 GAGGTGCGATGACGGCGA 62.492 66.667 16.62 0.00 40.15 5.54
224 225 4.796231 AGGTGCGATGACGGCGAC 62.796 66.667 16.62 8.59 40.15 5.19
226 227 3.838795 GTGCGATGACGGCGACAC 61.839 66.667 16.62 7.85 40.15 3.67
227 228 4.350441 TGCGATGACGGCGACACA 62.350 61.111 16.62 11.31 40.15 3.72
228 229 3.838795 GCGATGACGGCGACACAC 61.839 66.667 16.62 10.95 40.15 3.82
229 230 2.126463 CGATGACGGCGACACACT 60.126 61.111 16.62 0.00 35.72 3.55
230 231 1.733041 CGATGACGGCGACACACTT 60.733 57.895 16.62 0.00 35.72 3.16
231 232 1.282248 CGATGACGGCGACACACTTT 61.282 55.000 16.62 0.00 35.72 2.66
232 233 0.865769 GATGACGGCGACACACTTTT 59.134 50.000 16.62 0.00 0.00 2.27
233 234 0.586319 ATGACGGCGACACACTTTTG 59.414 50.000 16.62 0.00 0.00 2.44
234 235 0.460459 TGACGGCGACACACTTTTGA 60.460 50.000 16.62 0.00 0.00 2.69
235 236 0.042448 GACGGCGACACACTTTTGAC 60.042 55.000 16.62 0.00 0.00 3.18
236 237 0.461339 ACGGCGACACACTTTTGACT 60.461 50.000 16.62 0.00 0.00 3.41
237 238 0.655733 CGGCGACACACTTTTGACTT 59.344 50.000 0.00 0.00 0.00 3.01
238 239 1.594518 CGGCGACACACTTTTGACTTG 60.595 52.381 0.00 0.00 0.00 3.16
239 240 1.466855 GCGACACACTTTTGACTTGC 58.533 50.000 0.00 0.00 0.00 4.01
240 241 1.064060 GCGACACACTTTTGACTTGCT 59.936 47.619 0.00 0.00 0.00 3.91
241 242 2.477863 GCGACACACTTTTGACTTGCTT 60.478 45.455 0.00 0.00 0.00 3.91
242 243 3.758300 CGACACACTTTTGACTTGCTTT 58.242 40.909 0.00 0.00 0.00 3.51
243 244 3.543494 CGACACACTTTTGACTTGCTTTG 59.457 43.478 0.00 0.00 0.00 2.77
244 245 3.848726 ACACACTTTTGACTTGCTTTGG 58.151 40.909 0.00 0.00 0.00 3.28
245 246 3.258123 ACACACTTTTGACTTGCTTTGGT 59.742 39.130 0.00 0.00 0.00 3.67
246 247 3.613737 CACACTTTTGACTTGCTTTGGTG 59.386 43.478 0.00 0.00 0.00 4.17
247 248 3.509575 ACACTTTTGACTTGCTTTGGTGA 59.490 39.130 0.00 0.00 0.00 4.02
248 249 4.160252 ACACTTTTGACTTGCTTTGGTGAT 59.840 37.500 0.00 0.00 0.00 3.06
249 250 5.111293 CACTTTTGACTTGCTTTGGTGATT 58.889 37.500 0.00 0.00 0.00 2.57
250 251 5.005971 CACTTTTGACTTGCTTTGGTGATTG 59.994 40.000 0.00 0.00 0.00 2.67
251 252 2.798976 TGACTTGCTTTGGTGATTGC 57.201 45.000 0.00 0.00 0.00 3.56
252 253 2.030371 TGACTTGCTTTGGTGATTGCA 58.970 42.857 0.00 0.00 0.00 4.08
253 254 2.034939 TGACTTGCTTTGGTGATTGCAG 59.965 45.455 0.00 0.00 36.75 4.41
254 255 1.269936 ACTTGCTTTGGTGATTGCAGC 60.270 47.619 0.00 0.00 42.72 5.25
255 256 0.318869 TTGCTTTGGTGATTGCAGCG 60.319 50.000 0.00 0.00 45.27 5.18
256 257 1.444895 GCTTTGGTGATTGCAGCGG 60.445 57.895 0.00 0.00 45.27 5.52
257 258 1.865788 GCTTTGGTGATTGCAGCGGA 61.866 55.000 0.00 0.00 45.27 5.54
258 259 0.169672 CTTTGGTGATTGCAGCGGAG 59.830 55.000 0.00 0.00 45.27 4.63
259 260 1.243342 TTTGGTGATTGCAGCGGAGG 61.243 55.000 0.00 0.00 45.27 4.30
260 261 2.045926 GGTGATTGCAGCGGAGGT 60.046 61.111 0.00 0.00 41.48 3.85
272 273 4.773117 GGAGGTGCGACGACGGTC 62.773 72.222 9.67 0.00 40.15 4.79
273 274 4.034258 GAGGTGCGACGACGGTCA 62.034 66.667 9.67 0.00 43.61 4.02
274 275 4.338539 AGGTGCGACGACGGTCAC 62.339 66.667 9.67 9.21 43.61 3.67
283 284 4.072088 GACGGTCACGCGCCTTTG 62.072 66.667 5.73 0.00 46.04 2.77
284 285 4.595538 ACGGTCACGCGCCTTTGA 62.596 61.111 5.73 0.00 46.04 2.69
285 286 4.072088 CGGTCACGCGCCTTTGAC 62.072 66.667 16.68 16.68 41.28 3.18
286 287 2.665185 GGTCACGCGCCTTTGACT 60.665 61.111 21.99 0.00 41.65 3.41
287 288 1.373748 GGTCACGCGCCTTTGACTA 60.374 57.895 21.99 0.00 41.65 2.59
288 289 1.352156 GGTCACGCGCCTTTGACTAG 61.352 60.000 21.99 2.10 41.65 2.57
289 290 0.388134 GTCACGCGCCTTTGACTAGA 60.388 55.000 17.43 0.00 39.30 2.43
290 291 0.530744 TCACGCGCCTTTGACTAGAT 59.469 50.000 5.73 0.00 0.00 1.98
291 292 0.924090 CACGCGCCTTTGACTAGATC 59.076 55.000 5.73 0.00 0.00 2.75
292 293 0.179108 ACGCGCCTTTGACTAGATCC 60.179 55.000 5.73 0.00 0.00 3.36
293 294 1.209275 CGCGCCTTTGACTAGATCCG 61.209 60.000 0.00 0.00 0.00 4.18
294 295 0.876342 GCGCCTTTGACTAGATCCGG 60.876 60.000 0.00 0.00 0.00 5.14
295 296 0.460311 CGCCTTTGACTAGATCCGGT 59.540 55.000 0.00 0.00 0.00 5.28
296 297 1.802880 CGCCTTTGACTAGATCCGGTG 60.803 57.143 0.00 0.00 0.00 4.94
297 298 1.480954 GCCTTTGACTAGATCCGGTGA 59.519 52.381 0.00 0.00 0.00 4.02
298 299 2.103263 GCCTTTGACTAGATCCGGTGAT 59.897 50.000 0.00 0.00 0.00 3.06
299 300 3.432326 GCCTTTGACTAGATCCGGTGATT 60.432 47.826 0.00 0.00 0.00 2.57
300 301 4.122776 CCTTTGACTAGATCCGGTGATTG 58.877 47.826 0.00 0.00 0.00 2.67
301 302 2.890808 TGACTAGATCCGGTGATTGC 57.109 50.000 0.00 0.00 0.00 3.56
302 303 2.107366 TGACTAGATCCGGTGATTGCA 58.893 47.619 0.00 0.00 0.00 4.08
303 304 2.101415 TGACTAGATCCGGTGATTGCAG 59.899 50.000 0.00 0.00 0.00 4.41
304 305 1.202580 ACTAGATCCGGTGATTGCAGC 60.203 52.381 0.00 0.00 39.10 5.25
305 306 1.069823 CTAGATCCGGTGATTGCAGCT 59.930 52.381 0.00 0.00 40.29 4.24
306 307 0.463295 AGATCCGGTGATTGCAGCTG 60.463 55.000 10.11 10.11 40.29 4.24
307 308 0.745845 GATCCGGTGATTGCAGCTGT 60.746 55.000 16.64 0.00 40.29 4.40
308 309 0.745845 ATCCGGTGATTGCAGCTGTC 60.746 55.000 16.64 8.39 40.29 3.51
309 310 2.743752 CCGGTGATTGCAGCTGTCG 61.744 63.158 16.64 8.00 40.29 4.35
310 311 2.482374 GGTGATTGCAGCTGTCGC 59.518 61.111 16.64 11.49 39.38 5.19
312 313 1.580845 GGTGATTGCAGCTGTCGCTT 61.581 55.000 16.64 0.00 46.47 4.68
313 314 0.453950 GTGATTGCAGCTGTCGCTTG 60.454 55.000 16.64 0.00 46.47 4.01
314 315 0.603439 TGATTGCAGCTGTCGCTTGA 60.603 50.000 16.64 0.00 46.47 3.02
315 316 0.731417 GATTGCAGCTGTCGCTTGAT 59.269 50.000 16.64 0.00 46.47 2.57
316 317 0.450583 ATTGCAGCTGTCGCTTGATG 59.549 50.000 16.64 0.00 46.47 3.07
317 318 1.579964 TTGCAGCTGTCGCTTGATGG 61.580 55.000 16.64 0.00 46.47 3.51
318 319 2.037136 GCAGCTGTCGCTTGATGGT 61.037 57.895 16.64 0.00 46.47 3.55
319 320 1.975363 GCAGCTGTCGCTTGATGGTC 61.975 60.000 16.64 0.00 46.47 4.02
320 321 0.390866 CAGCTGTCGCTTGATGGTCT 60.391 55.000 5.25 0.00 46.47 3.85
321 322 1.134995 CAGCTGTCGCTTGATGGTCTA 60.135 52.381 5.25 0.00 46.47 2.59
322 323 1.134965 AGCTGTCGCTTGATGGTCTAC 60.135 52.381 0.00 0.00 46.47 2.59
323 324 1.550065 CTGTCGCTTGATGGTCTACG 58.450 55.000 0.00 0.00 0.00 3.51
324 325 1.132453 CTGTCGCTTGATGGTCTACGA 59.868 52.381 0.00 0.00 0.00 3.43
325 326 1.542472 TGTCGCTTGATGGTCTACGAA 59.458 47.619 0.00 0.00 0.00 3.85
326 327 1.918609 GTCGCTTGATGGTCTACGAAC 59.081 52.381 0.00 0.00 0.00 3.95
327 328 1.542472 TCGCTTGATGGTCTACGAACA 59.458 47.619 0.00 0.00 32.20 3.18
328 329 2.165641 TCGCTTGATGGTCTACGAACAT 59.834 45.455 0.00 0.00 43.25 2.71
329 330 2.282555 CGCTTGATGGTCTACGAACATG 59.717 50.000 0.00 0.00 40.37 3.21
330 331 2.609459 GCTTGATGGTCTACGAACATGG 59.391 50.000 0.00 0.00 40.37 3.66
331 332 3.678806 GCTTGATGGTCTACGAACATGGA 60.679 47.826 0.00 0.00 40.37 3.41
332 333 4.697514 CTTGATGGTCTACGAACATGGAT 58.302 43.478 0.00 0.00 40.37 3.41
333 334 4.058721 TGATGGTCTACGAACATGGATG 57.941 45.455 0.00 0.00 40.37 3.51
334 335 3.450817 TGATGGTCTACGAACATGGATGT 59.549 43.478 0.00 0.00 40.37 3.06
335 336 4.647399 TGATGGTCTACGAACATGGATGTA 59.353 41.667 0.00 0.00 40.37 2.29
336 337 5.128008 TGATGGTCTACGAACATGGATGTAA 59.872 40.000 0.00 0.00 40.37 2.41
337 338 4.751060 TGGTCTACGAACATGGATGTAAC 58.249 43.478 0.00 0.00 40.80 2.50
338 339 4.464951 TGGTCTACGAACATGGATGTAACT 59.535 41.667 0.00 0.00 40.80 2.24
339 340 5.046878 TGGTCTACGAACATGGATGTAACTT 60.047 40.000 0.00 0.00 40.80 2.66
340 341 5.873164 GGTCTACGAACATGGATGTAACTTT 59.127 40.000 0.00 0.00 40.80 2.66
341 342 6.370718 GGTCTACGAACATGGATGTAACTTTT 59.629 38.462 0.00 0.00 40.80 2.27
342 343 7.234384 GTCTACGAACATGGATGTAACTTTTG 58.766 38.462 0.00 0.00 40.80 2.44
343 344 6.932400 TCTACGAACATGGATGTAACTTTTGT 59.068 34.615 0.00 0.00 40.80 2.83
344 345 6.385649 ACGAACATGGATGTAACTTTTGTT 57.614 33.333 0.00 0.00 45.76 2.83
345 346 7.499321 ACGAACATGGATGTAACTTTTGTTA 57.501 32.000 0.00 0.00 43.32 2.41
346 347 8.106247 ACGAACATGGATGTAACTTTTGTTAT 57.894 30.769 0.00 0.00 45.38 1.89
347 348 8.573035 ACGAACATGGATGTAACTTTTGTTATT 58.427 29.630 0.00 0.00 45.38 1.40
348 349 9.405587 CGAACATGGATGTAACTTTTGTTATTT 57.594 29.630 0.00 0.00 45.38 1.40
351 352 9.912634 ACATGGATGTAACTTTTGTTATTTCTG 57.087 29.630 0.00 0.00 45.38 3.02
352 353 9.912634 CATGGATGTAACTTTTGTTATTTCTGT 57.087 29.630 0.00 0.00 45.38 3.41
364 365 9.883142 TTTTGTTATTTCTGTTTTCATTGTCCT 57.117 25.926 0.00 0.00 0.00 3.85
365 366 8.870160 TTGTTATTTCTGTTTTCATTGTCCTG 57.130 30.769 0.00 0.00 0.00 3.86
366 367 6.922957 TGTTATTTCTGTTTTCATTGTCCTGC 59.077 34.615 0.00 0.00 0.00 4.85
367 368 4.320608 TTTCTGTTTTCATTGTCCTGCC 57.679 40.909 0.00 0.00 0.00 4.85
368 369 2.942804 TCTGTTTTCATTGTCCTGCCA 58.057 42.857 0.00 0.00 0.00 4.92
369 370 2.622942 TCTGTTTTCATTGTCCTGCCAC 59.377 45.455 0.00 0.00 0.00 5.01
370 371 1.336440 TGTTTTCATTGTCCTGCCACG 59.664 47.619 0.00 0.00 0.00 4.94
371 372 1.606668 GTTTTCATTGTCCTGCCACGA 59.393 47.619 0.00 0.00 0.00 4.35
372 373 1.234821 TTTCATTGTCCTGCCACGAC 58.765 50.000 0.00 0.00 0.00 4.34
373 374 0.948623 TTCATTGTCCTGCCACGACG 60.949 55.000 0.00 0.00 32.68 5.12
374 375 1.667830 CATTGTCCTGCCACGACGT 60.668 57.895 0.00 0.00 32.68 4.34
375 376 1.667830 ATTGTCCTGCCACGACGTG 60.668 57.895 21.02 21.02 32.68 4.49
376 377 2.094757 ATTGTCCTGCCACGACGTGA 62.095 55.000 28.83 9.38 35.23 4.35
377 378 2.094757 TTGTCCTGCCACGACGTGAT 62.095 55.000 28.83 0.00 35.23 3.06
378 379 2.094659 GTCCTGCCACGACGTGATG 61.095 63.158 28.83 14.23 35.23 3.07
379 380 2.261361 CCTGCCACGACGTGATGA 59.739 61.111 28.83 10.95 35.23 2.92
380 381 1.374125 CCTGCCACGACGTGATGAA 60.374 57.895 28.83 7.15 35.23 2.57
381 382 0.740868 CCTGCCACGACGTGATGAAT 60.741 55.000 28.83 0.00 35.23 2.57
382 383 1.470805 CCTGCCACGACGTGATGAATA 60.471 52.381 28.83 7.44 35.23 1.75
383 384 1.854743 CTGCCACGACGTGATGAATAG 59.145 52.381 28.83 11.32 35.23 1.73
384 385 1.474879 TGCCACGACGTGATGAATAGA 59.525 47.619 28.83 0.90 35.23 1.98
385 386 2.100749 TGCCACGACGTGATGAATAGAT 59.899 45.455 28.83 0.00 35.23 1.98
386 387 2.726760 GCCACGACGTGATGAATAGATC 59.273 50.000 28.83 1.70 35.23 2.75
387 388 3.795488 GCCACGACGTGATGAATAGATCA 60.795 47.826 28.83 0.00 43.67 2.92
388 389 4.359706 CCACGACGTGATGAATAGATCAA 58.640 43.478 28.83 0.00 42.54 2.57
389 390 4.803613 CCACGACGTGATGAATAGATCAAA 59.196 41.667 28.83 0.00 42.54 2.69
390 391 5.290885 CCACGACGTGATGAATAGATCAAAA 59.709 40.000 28.83 0.00 42.54 2.44
391 392 6.406018 CACGACGTGATGAATAGATCAAAAG 58.594 40.000 23.39 0.00 42.54 2.27
392 393 6.035005 CACGACGTGATGAATAGATCAAAAGT 59.965 38.462 23.39 0.00 42.54 2.66
393 394 6.590292 ACGACGTGATGAATAGATCAAAAGTT 59.410 34.615 0.00 0.00 42.54 2.66
394 395 7.117812 ACGACGTGATGAATAGATCAAAAGTTT 59.882 33.333 0.00 0.00 42.54 2.66
395 396 7.632515 CGACGTGATGAATAGATCAAAAGTTTC 59.367 37.037 0.00 0.00 42.54 2.78
396 397 7.752695 ACGTGATGAATAGATCAAAAGTTTCC 58.247 34.615 0.00 0.00 42.54 3.13
397 398 7.607991 ACGTGATGAATAGATCAAAAGTTTCCT 59.392 33.333 0.00 0.00 42.54 3.36
398 399 8.454106 CGTGATGAATAGATCAAAAGTTTCCTT 58.546 33.333 0.00 0.00 42.54 3.36
421 422 9.952341 CCTTAAAAAGAAAAGAAAAACAAGACG 57.048 29.630 0.00 0.00 0.00 4.18
424 425 8.582433 AAAAAGAAAAGAAAAACAAGACGTCA 57.418 26.923 19.50 0.00 0.00 4.35
425 426 8.582433 AAAAGAAAAGAAAAACAAGACGTCAA 57.418 26.923 19.50 0.00 0.00 3.18
426 427 7.796958 AAGAAAAGAAAAACAAGACGTCAAG 57.203 32.000 19.50 11.96 0.00 3.02
427 428 6.322491 AGAAAAGAAAAACAAGACGTCAAGG 58.678 36.000 19.50 8.92 0.00 3.61
428 429 5.638596 AAAGAAAAACAAGACGTCAAGGT 57.361 34.783 19.50 9.60 0.00 3.50
429 430 4.877323 AGAAAAACAAGACGTCAAGGTC 57.123 40.909 19.50 5.49 37.19 3.85
430 431 4.258543 AGAAAAACAAGACGTCAAGGTCA 58.741 39.130 19.50 0.00 39.42 4.02
431 432 4.881850 AGAAAAACAAGACGTCAAGGTCAT 59.118 37.500 19.50 0.60 39.42 3.06
432 433 6.053005 AGAAAAACAAGACGTCAAGGTCATA 58.947 36.000 19.50 0.00 39.42 2.15
433 434 5.668558 AAAACAAGACGTCAAGGTCATAC 57.331 39.130 19.50 0.00 39.42 2.39
434 435 4.330944 AACAAGACGTCAAGGTCATACA 57.669 40.909 19.50 0.00 39.42 2.29
435 436 4.330944 ACAAGACGTCAAGGTCATACAA 57.669 40.909 19.50 0.00 39.42 2.41
436 437 4.699637 ACAAGACGTCAAGGTCATACAAA 58.300 39.130 19.50 0.00 39.42 2.83
437 438 4.510340 ACAAGACGTCAAGGTCATACAAAC 59.490 41.667 19.50 0.00 39.42 2.93
438 439 4.330944 AGACGTCAAGGTCATACAAACA 57.669 40.909 19.50 0.00 39.42 2.83
439 440 4.699637 AGACGTCAAGGTCATACAAACAA 58.300 39.130 19.50 0.00 39.42 2.83
440 441 4.750098 AGACGTCAAGGTCATACAAACAAG 59.250 41.667 19.50 0.00 39.42 3.16
441 442 3.813166 ACGTCAAGGTCATACAAACAAGG 59.187 43.478 0.00 0.00 0.00 3.61
442 443 3.364964 CGTCAAGGTCATACAAACAAGGC 60.365 47.826 0.00 0.00 0.00 4.35
443 444 3.057526 GTCAAGGTCATACAAACAAGGCC 60.058 47.826 0.00 0.00 0.00 5.19
444 445 2.215942 AGGTCATACAAACAAGGCCC 57.784 50.000 0.00 0.00 0.00 5.80
445 446 1.182667 GGTCATACAAACAAGGCCCC 58.817 55.000 0.00 0.00 0.00 5.80
446 447 0.808755 GTCATACAAACAAGGCCCCG 59.191 55.000 0.00 0.00 0.00 5.73
447 448 0.402504 TCATACAAACAAGGCCCCGT 59.597 50.000 0.00 0.00 0.00 5.28
448 449 1.202952 TCATACAAACAAGGCCCCGTT 60.203 47.619 0.00 0.00 0.00 4.44
449 450 1.616374 CATACAAACAAGGCCCCGTTT 59.384 47.619 13.09 13.09 35.76 3.60
450 451 1.320507 TACAAACAAGGCCCCGTTTC 58.679 50.000 15.41 0.00 33.14 2.78
451 452 0.684805 ACAAACAAGGCCCCGTTTCA 60.685 50.000 15.41 0.00 33.14 2.69
452 453 0.461961 CAAACAAGGCCCCGTTTCAA 59.538 50.000 15.41 0.00 33.14 2.69
453 454 1.069978 CAAACAAGGCCCCGTTTCAAT 59.930 47.619 15.41 0.00 33.14 2.57
454 455 0.966179 AACAAGGCCCCGTTTCAATC 59.034 50.000 0.00 0.00 0.00 2.67
455 456 0.178975 ACAAGGCCCCGTTTCAATCA 60.179 50.000 0.00 0.00 0.00 2.57
456 457 0.965439 CAAGGCCCCGTTTCAATCAA 59.035 50.000 0.00 0.00 0.00 2.57
457 458 1.342819 CAAGGCCCCGTTTCAATCAAA 59.657 47.619 0.00 0.00 0.00 2.69
458 459 0.966179 AGGCCCCGTTTCAATCAAAC 59.034 50.000 0.00 0.00 41.08 2.93
459 460 0.966179 GGCCCCGTTTCAATCAAACT 59.034 50.000 0.00 0.00 42.17 2.66
460 461 1.343142 GGCCCCGTTTCAATCAAACTT 59.657 47.619 0.00 0.00 42.17 2.66
461 462 2.403259 GCCCCGTTTCAATCAAACTTG 58.597 47.619 0.00 0.00 42.17 3.16
462 463 2.223947 GCCCCGTTTCAATCAAACTTGT 60.224 45.455 0.00 0.00 42.17 3.16
463 464 3.004944 GCCCCGTTTCAATCAAACTTGTA 59.995 43.478 0.00 0.00 42.17 2.41
464 465 4.794169 CCCCGTTTCAATCAAACTTGTAG 58.206 43.478 0.00 0.00 42.17 2.74
465 466 4.517453 CCCCGTTTCAATCAAACTTGTAGA 59.483 41.667 0.00 0.00 42.17 2.59
466 467 5.183140 CCCCGTTTCAATCAAACTTGTAGAT 59.817 40.000 0.00 0.00 42.17 1.98
467 468 6.294508 CCCCGTTTCAATCAAACTTGTAGATT 60.295 38.462 0.00 0.00 42.17 2.40
468 469 7.145323 CCCGTTTCAATCAAACTTGTAGATTT 58.855 34.615 0.00 0.00 42.17 2.17
469 470 7.326063 CCCGTTTCAATCAAACTTGTAGATTTC 59.674 37.037 0.00 0.00 42.17 2.17
470 471 7.059488 CCGTTTCAATCAAACTTGTAGATTTCG 59.941 37.037 0.00 0.00 42.17 3.46
471 472 7.408290 CGTTTCAATCAAACTTGTAGATTTCGC 60.408 37.037 0.00 0.00 42.17 4.70
472 473 5.938322 TCAATCAAACTTGTAGATTTCGCC 58.062 37.500 0.00 0.00 30.04 5.54
473 474 4.965119 ATCAAACTTGTAGATTTCGCCC 57.035 40.909 0.00 0.00 0.00 6.13
474 475 2.739913 TCAAACTTGTAGATTTCGCCCG 59.260 45.455 0.00 0.00 0.00 6.13
475 476 2.467566 AACTTGTAGATTTCGCCCGT 57.532 45.000 0.00 0.00 0.00 5.28
476 477 3.598019 AACTTGTAGATTTCGCCCGTA 57.402 42.857 0.00 0.00 0.00 4.02
477 478 2.884827 ACTTGTAGATTTCGCCCGTAC 58.115 47.619 0.00 0.00 0.00 3.67
478 479 2.199236 CTTGTAGATTTCGCCCGTACC 58.801 52.381 0.00 0.00 0.00 3.34
479 480 1.477553 TGTAGATTTCGCCCGTACCT 58.522 50.000 0.00 0.00 0.00 3.08
480 481 1.826720 TGTAGATTTCGCCCGTACCTT 59.173 47.619 0.00 0.00 0.00 3.50
481 482 2.234414 TGTAGATTTCGCCCGTACCTTT 59.766 45.455 0.00 0.00 0.00 3.11
482 483 2.484742 AGATTTCGCCCGTACCTTTT 57.515 45.000 0.00 0.00 0.00 2.27
483 484 2.786777 AGATTTCGCCCGTACCTTTTT 58.213 42.857 0.00 0.00 0.00 1.94
512 513 2.144482 CGAATATTTCGCCCGTACCT 57.856 50.000 0.00 0.00 46.97 3.08
513 514 3.287312 CGAATATTTCGCCCGTACCTA 57.713 47.619 0.00 0.00 46.97 3.08
514 515 3.240069 CGAATATTTCGCCCGTACCTAG 58.760 50.000 0.00 0.00 46.97 3.02
515 516 3.058016 CGAATATTTCGCCCGTACCTAGA 60.058 47.826 0.00 0.00 46.97 2.43
516 517 4.483311 GAATATTTCGCCCGTACCTAGAG 58.517 47.826 0.00 0.00 0.00 2.43
517 518 2.062971 ATTTCGCCCGTACCTAGAGA 57.937 50.000 0.00 0.00 0.00 3.10
518 519 1.386533 TTTCGCCCGTACCTAGAGAG 58.613 55.000 0.00 0.00 0.00 3.20
527 528 4.237445 CCTAGAGAGGGCGAACGA 57.763 61.111 0.00 0.00 39.48 3.85
528 529 2.490165 CCTAGAGAGGGCGAACGAA 58.510 57.895 0.00 0.00 39.48 3.85
529 530 0.382515 CCTAGAGAGGGCGAACGAAG 59.617 60.000 0.00 0.00 39.48 3.79
530 531 0.382515 CTAGAGAGGGCGAACGAAGG 59.617 60.000 0.00 0.00 0.00 3.46
531 532 0.034767 TAGAGAGGGCGAACGAAGGA 60.035 55.000 0.00 0.00 0.00 3.36
532 533 0.684805 AGAGAGGGCGAACGAAGGAT 60.685 55.000 0.00 0.00 0.00 3.24
533 534 0.249114 GAGAGGGCGAACGAAGGATC 60.249 60.000 0.00 0.00 0.00 3.36
534 535 0.684805 AGAGGGCGAACGAAGGATCT 60.685 55.000 0.00 0.00 0.00 2.75
535 536 0.249114 GAGGGCGAACGAAGGATCTC 60.249 60.000 0.00 0.00 0.00 2.75
536 537 0.970937 AGGGCGAACGAAGGATCTCA 60.971 55.000 0.00 0.00 0.00 3.27
537 538 0.108329 GGGCGAACGAAGGATCTCAA 60.108 55.000 0.00 0.00 0.00 3.02
538 539 1.000145 GGCGAACGAAGGATCTCAAC 59.000 55.000 0.00 0.00 0.00 3.18
539 540 1.404315 GGCGAACGAAGGATCTCAACT 60.404 52.381 0.00 0.00 0.00 3.16
540 541 2.338500 GCGAACGAAGGATCTCAACTT 58.662 47.619 0.00 0.00 0.00 2.66
541 542 2.092838 GCGAACGAAGGATCTCAACTTG 59.907 50.000 0.00 0.00 0.00 3.16
542 543 2.668457 CGAACGAAGGATCTCAACTTGG 59.332 50.000 0.00 0.00 0.00 3.61
543 544 2.770164 ACGAAGGATCTCAACTTGGG 57.230 50.000 0.00 0.00 0.00 4.12
544 545 1.339151 ACGAAGGATCTCAACTTGGGC 60.339 52.381 0.00 0.00 0.00 5.36
545 546 1.373570 GAAGGATCTCAACTTGGGCG 58.626 55.000 0.00 0.00 0.00 6.13
546 547 0.984230 AAGGATCTCAACTTGGGCGA 59.016 50.000 0.00 0.00 0.00 5.54
547 548 0.984230 AGGATCTCAACTTGGGCGAA 59.016 50.000 0.00 0.00 0.00 4.70
548 549 1.065854 AGGATCTCAACTTGGGCGAAG 60.066 52.381 7.78 7.78 37.73 3.79
550 551 2.003301 GATCTCAACTTGGGCGAAGTC 58.997 52.381 15.43 0.00 44.68 3.01
551 552 0.319555 TCTCAACTTGGGCGAAGTCG 60.320 55.000 15.43 4.55 44.68 4.18
563 564 4.612412 AAGTCGCGACGCCCCAAA 62.612 61.111 31.56 0.00 36.20 3.28
564 565 4.612412 AGTCGCGACGCCCCAAAA 62.612 61.111 31.56 0.00 36.20 2.44
565 566 4.379143 GTCGCGACGCCCCAAAAC 62.379 66.667 25.19 0.00 0.00 2.43
566 567 4.912485 TCGCGACGCCCCAAAACA 62.912 61.111 15.34 0.00 0.00 2.83
567 568 3.955101 CGCGACGCCCCAAAACAA 61.955 61.111 15.34 0.00 0.00 2.83
568 569 2.413765 GCGACGCCCCAAAACAAA 59.586 55.556 9.14 0.00 0.00 2.83
569 570 1.227002 GCGACGCCCCAAAACAAAA 60.227 52.632 9.14 0.00 0.00 2.44
570 571 1.484227 GCGACGCCCCAAAACAAAAC 61.484 55.000 9.14 0.00 0.00 2.43
571 572 1.203600 CGACGCCCCAAAACAAAACG 61.204 55.000 0.00 0.00 0.00 3.60
572 573 0.872451 GACGCCCCAAAACAAAACGG 60.872 55.000 0.00 0.00 0.00 4.44
573 574 1.142097 CGCCCCAAAACAAAACGGT 59.858 52.632 0.00 0.00 0.00 4.83
574 575 1.148759 CGCCCCAAAACAAAACGGTG 61.149 55.000 0.00 0.00 0.00 4.94
575 576 1.433053 GCCCCAAAACAAAACGGTGC 61.433 55.000 0.00 0.00 0.00 5.01
576 577 0.176910 CCCCAAAACAAAACGGTGCT 59.823 50.000 0.00 0.00 0.00 4.40
577 578 1.285578 CCCAAAACAAAACGGTGCTG 58.714 50.000 0.00 0.00 0.00 4.41
578 579 0.649993 CCAAAACAAAACGGTGCTGC 59.350 50.000 0.00 0.00 0.00 5.25
579 580 0.649993 CAAAACAAAACGGTGCTGCC 59.350 50.000 0.00 0.00 0.00 4.85
580 581 0.534873 AAAACAAAACGGTGCTGCCT 59.465 45.000 0.00 0.00 34.25 4.75
581 582 0.534873 AAACAAAACGGTGCTGCCTT 59.465 45.000 0.00 0.00 34.25 4.35
582 583 0.534873 AACAAAACGGTGCTGCCTTT 59.465 45.000 0.00 0.00 34.25 3.11
583 584 0.534873 ACAAAACGGTGCTGCCTTTT 59.465 45.000 0.00 0.00 39.99 2.27
584 585 1.066502 ACAAAACGGTGCTGCCTTTTT 60.067 42.857 0.00 8.49 45.84 1.94
585 586 2.166664 ACAAAACGGTGCTGCCTTTTTA 59.833 40.909 12.18 0.00 43.95 1.52
586 587 3.181470 ACAAAACGGTGCTGCCTTTTTAT 60.181 39.130 12.18 2.57 43.95 1.40
587 588 3.744238 AAACGGTGCTGCCTTTTTATT 57.256 38.095 0.00 0.00 35.47 1.40
588 589 3.744238 AACGGTGCTGCCTTTTTATTT 57.256 38.095 0.00 0.00 34.25 1.40
589 590 3.744238 ACGGTGCTGCCTTTTTATTTT 57.256 38.095 0.00 0.00 34.25 1.82
590 591 4.066646 ACGGTGCTGCCTTTTTATTTTT 57.933 36.364 0.00 0.00 34.25 1.94
673 675 2.060980 GCACCCAACACAACCCCAA 61.061 57.895 0.00 0.00 0.00 4.12
685 687 2.203684 CCCCAACCAGCAAAGCCT 60.204 61.111 0.00 0.00 0.00 4.58
692 694 0.886490 ACCAGCAAAGCCTCACGAAG 60.886 55.000 0.00 0.00 0.00 3.79
787 791 2.307768 CAGATAACTGCTCCCCGACTA 58.692 52.381 0.00 0.00 37.33 2.59
788 792 2.034812 CAGATAACTGCTCCCCGACTAC 59.965 54.545 0.00 0.00 37.33 2.73
789 793 2.029623 GATAACTGCTCCCCGACTACA 58.970 52.381 0.00 0.00 0.00 2.74
790 794 1.180029 TAACTGCTCCCCGACTACAC 58.820 55.000 0.00 0.00 0.00 2.90
791 795 1.874345 AACTGCTCCCCGACTACACG 61.874 60.000 0.00 0.00 0.00 4.49
792 796 2.034532 TGCTCCCCGACTACACGA 59.965 61.111 0.00 0.00 35.09 4.35
866 894 3.754850 CCTAACCAAAAGTCTAAACCCCG 59.245 47.826 0.00 0.00 0.00 5.73
896 925 4.458642 GGCTACTAGTGGTATACTACTGCC 59.541 50.000 26.93 25.10 40.89 4.85
1300 1329 4.536364 TTGCTTCGATTCGATTTGATCC 57.464 40.909 9.96 0.00 35.23 3.36
1307 1336 3.740832 CGATTCGATTTGATCCGGAATCA 59.259 43.478 9.01 10.43 42.76 2.57
1455 1496 2.368875 ACCCCTTGTGTGTAGTTCTCTG 59.631 50.000 0.00 0.00 0.00 3.35
1503 1548 9.925268 TGTACTTTCTTCGTTTATTTCTGAAAC 57.075 29.630 4.73 0.00 34.16 2.78
1592 1676 1.403679 CTCTGCTCTAGAGTGTTCCCG 59.596 57.143 20.75 1.00 46.45 5.14
1598 1687 0.541863 CTAGAGTGTTCCCGGCCAAT 59.458 55.000 2.24 0.00 0.00 3.16
1609 1698 1.412343 CCCGGCCAATCTTATTTTGGG 59.588 52.381 2.24 0.00 43.20 4.12
1618 1707 5.639082 CCAATCTTATTTTGGGTTGACTTGC 59.361 40.000 0.00 0.00 40.00 4.01
1625 1714 0.771127 TGGGTTGACTTGCTAGGCTT 59.229 50.000 1.86 0.00 0.00 4.35
1634 1735 5.811190 TGACTTGCTAGGCTTTTGGTATTA 58.189 37.500 1.86 0.00 0.00 0.98
1635 1736 6.242396 TGACTTGCTAGGCTTTTGGTATTAA 58.758 36.000 1.86 0.00 0.00 1.40
1636 1737 6.717540 TGACTTGCTAGGCTTTTGGTATTAAA 59.282 34.615 1.86 0.00 0.00 1.52
1637 1738 6.920817 ACTTGCTAGGCTTTTGGTATTAAAC 58.079 36.000 0.00 0.00 0.00 2.01
1638 1739 6.492087 ACTTGCTAGGCTTTTGGTATTAAACA 59.508 34.615 0.00 0.00 0.00 2.83
1639 1740 7.178451 ACTTGCTAGGCTTTTGGTATTAAACAT 59.822 33.333 0.00 0.00 0.00 2.71
1640 1741 7.475137 TGCTAGGCTTTTGGTATTAAACATT 57.525 32.000 0.00 0.00 0.00 2.71
1641 1742 7.902087 TGCTAGGCTTTTGGTATTAAACATTT 58.098 30.769 0.00 0.00 0.00 2.32
1687 1917 5.072329 AGCTACTTAATAGACATGGCCACAT 59.928 40.000 8.16 0.00 33.03 3.21
1822 2106 2.152016 GACTGGCTTACCTTTGTGGAC 58.848 52.381 0.00 0.00 39.71 4.02
1835 2121 6.597562 ACCTTTGTGGACACATACTCTTAAA 58.402 36.000 5.91 0.00 41.52 1.52
1856 2150 1.847328 CCCTGTTGGTACCCCATTTC 58.153 55.000 10.07 0.00 41.49 2.17
1857 2151 1.076350 CCCTGTTGGTACCCCATTTCA 59.924 52.381 10.07 0.00 41.49 2.69
1967 2261 4.938226 GCAGAAACTACAAGGTATTGAGCT 59.062 41.667 0.00 0.00 38.83 4.09
2086 2382 3.131223 TGCGAAACTTTTCAATGGTCCAA 59.869 39.130 0.00 0.00 37.01 3.53
2109 2405 1.684248 GCTGCACATCCTGGGAGAATT 60.684 52.381 0.00 0.00 0.00 2.17
2217 2516 5.567138 GCTAATAAGAAGCTGAAAAGGCA 57.433 39.130 0.00 0.00 37.01 4.75
2255 2554 6.399743 TCTGTTACTGTATGGCGAAATAACA 58.600 36.000 0.00 0.00 31.99 2.41
2289 2588 9.144747 GTATCGATGTGCATCTTCAGTTTATAT 57.855 33.333 8.54 0.00 35.72 0.86
2290 2589 7.643528 TCGATGTGCATCTTCAGTTTATATC 57.356 36.000 10.05 0.00 35.72 1.63
2355 2655 5.180868 CAGGAGGTTCTTCTCATGTGAAAAG 59.819 44.000 11.11 1.50 39.75 2.27
2656 3074 4.822026 AGAACAGCAGAGCGTTTACTTAT 58.178 39.130 0.00 0.00 0.00 1.73
2699 3117 2.745968 AGGCAAGTTTTTCTCCCAACA 58.254 42.857 0.00 0.00 0.00 3.33
2729 3149 8.506437 TCACTATTGCTAAAAGTTCAGTTGATG 58.494 33.333 0.00 0.00 0.00 3.07
2740 3160 5.164233 AGTTCAGTTGATGTGTCATCTACG 58.836 41.667 14.60 11.26 33.66 3.51
2858 3405 7.885297 TGTTGCTTAGATGCTTCTATGTTTTT 58.115 30.769 18.16 0.00 34.44 1.94
2974 3526 6.917533 AGAATGAAAGTATGCTTCCAAACAG 58.082 36.000 0.00 0.00 33.01 3.16
2976 3528 7.665559 AGAATGAAAGTATGCTTCCAAACAGTA 59.334 33.333 0.00 0.00 33.01 2.74
3008 3563 4.332819 CCTAAACAGGTACAGCTGCATAAC 59.667 45.833 15.27 7.09 0.00 1.89
3011 3566 3.338249 ACAGGTACAGCTGCATAACTTG 58.662 45.455 15.27 15.22 0.00 3.16
3026 3583 7.661968 TGCATAACTTGTTTGTTAGCCAAATA 58.338 30.769 0.00 0.00 44.50 1.40
3351 3909 2.250008 TCCATCCAAGAGGTATGAGGGA 59.750 50.000 0.00 0.00 35.51 4.20
3407 3965 9.248291 AGTTATGCTGTTTTGTTCATTTTGTAG 57.752 29.630 0.00 0.00 0.00 2.74
3409 3967 9.809096 TTATGCTGTTTTGTTCATTTTGTAGAA 57.191 25.926 0.00 0.00 0.00 2.10
3411 3969 7.319646 TGCTGTTTTGTTCATTTTGTAGAAGT 58.680 30.769 0.00 0.00 0.00 3.01
3497 4055 3.191581 GGCCTTCAAACCTCTCTTTAAGC 59.808 47.826 0.00 0.00 0.00 3.09
3598 4156 4.559862 ACTGGGTATGTCCTCTTTCTTG 57.440 45.455 0.00 0.00 36.25 3.02
3600 4158 4.020128 ACTGGGTATGTCCTCTTTCTTGTC 60.020 45.833 0.00 0.00 36.25 3.18
3667 4225 0.937304 CCTTGTTGATATCCCACGCG 59.063 55.000 3.53 3.53 0.00 6.01
3749 4307 4.216687 ACTCTAGCCTAATATCTGACGCAC 59.783 45.833 0.00 0.00 0.00 5.34
3816 4374 5.591877 CCTTGTAGAGCCAATTTTCATAGCT 59.408 40.000 0.00 0.00 36.25 3.32
3911 4469 8.785329 TTTGCTCTCCTTATTTTTGTTTTTGT 57.215 26.923 0.00 0.00 0.00 2.83
3919 4477 9.171877 TCCTTATTTTTGTTTTTGTTGCAGATT 57.828 25.926 0.00 0.00 0.00 2.40
4070 4630 7.696992 TTTTAAATCAAAGTAGGCTGTAGGG 57.303 36.000 0.00 0.00 0.00 3.53
4071 4631 6.630203 TTAAATCAAAGTAGGCTGTAGGGA 57.370 37.500 0.00 0.00 0.00 4.20
4072 4632 4.489306 AATCAAAGTAGGCTGTAGGGAC 57.511 45.455 0.00 0.00 0.00 4.46
4073 4633 2.897350 TCAAAGTAGGCTGTAGGGACA 58.103 47.619 0.00 0.00 0.00 4.02
4074 4634 3.244582 TCAAAGTAGGCTGTAGGGACAA 58.755 45.455 0.00 0.00 34.35 3.18
4075 4635 3.260884 TCAAAGTAGGCTGTAGGGACAAG 59.739 47.826 0.00 0.00 34.35 3.16
4076 4636 1.196012 AGTAGGCTGTAGGGACAAGC 58.804 55.000 0.00 0.00 34.35 4.01
4077 4637 0.902531 GTAGGCTGTAGGGACAAGCA 59.097 55.000 0.00 0.00 34.35 3.91
4078 4638 1.134670 GTAGGCTGTAGGGACAAGCAG 60.135 57.143 0.00 0.00 34.35 4.24
4079 4639 0.545309 AGGCTGTAGGGACAAGCAGA 60.545 55.000 0.00 0.00 34.35 4.26
4080 4640 0.543749 GGCTGTAGGGACAAGCAGAT 59.456 55.000 0.00 0.00 34.35 2.90
4081 4641 1.661341 GCTGTAGGGACAAGCAGATG 58.339 55.000 0.00 0.00 34.35 2.90
4082 4642 1.208052 GCTGTAGGGACAAGCAGATGA 59.792 52.381 0.00 0.00 34.35 2.92
4564 5129 0.247460 CAAGCAGGACGAGTGATGGA 59.753 55.000 0.00 0.00 0.00 3.41
4633 5198 5.394993 GGTTAACTACTATGGGAAGACGCTT 60.395 44.000 5.42 0.00 0.00 4.68
4753 5318 0.918799 TCCCAATTGGAGCTGCCCTA 60.919 55.000 26.60 0.00 38.61 3.53
4922 5488 4.961551 GTGTGCGTATACGGAATTCAAATG 59.038 41.667 25.55 0.00 42.34 2.32
5156 5737 4.881850 CCTAACTTGCACCTTGTTATAGGG 59.118 45.833 0.00 0.00 39.76 3.53
5157 5738 4.382386 AACTTGCACCTTGTTATAGGGT 57.618 40.909 0.00 0.00 39.80 4.34
5203 5784 6.000219 ACCATATAGTTGTGATCTGATTGCC 59.000 40.000 0.00 0.00 0.00 4.52
5275 5856 7.736893 ACTCAGTGTTAATCCTTAAGTCTTGT 58.263 34.615 0.97 0.00 0.00 3.16
5302 5883 4.713824 TTTATCGGGTGTACTCTGTCTG 57.286 45.455 0.00 0.00 0.00 3.51
5310 5891 3.762288 GGTGTACTCTGTCTGTGGTATCA 59.238 47.826 0.00 0.00 0.00 2.15
5362 5944 2.571653 TGCACCTATGGCTGATATACCC 59.428 50.000 0.00 0.00 0.00 3.69
5383 5965 3.194116 CCTACACAAGCAGCATTTGGAAT 59.806 43.478 0.00 0.00 0.00 3.01
5547 6137 5.180868 ACACTTCATCTTCATTGCTTCTGAC 59.819 40.000 0.00 0.00 0.00 3.51
5609 6199 9.078990 TCGATATACACAGGTATTCTGAAGATT 57.921 33.333 0.00 0.00 46.18 2.40
5610 6200 9.133627 CGATATACACAGGTATTCTGAAGATTG 57.866 37.037 0.00 0.00 46.18 2.67
5662 6260 8.727100 ATTATGTACACATCCTCCATCTCTTA 57.273 34.615 0.00 0.00 37.76 2.10
5705 6303 0.962356 AGCTCAAAACCGCATCCAGG 60.962 55.000 0.00 0.00 0.00 4.45
5712 6310 3.214123 CCGCATCCAGGTGCCATG 61.214 66.667 0.00 0.00 42.06 3.66
5713 6311 3.896133 CGCATCCAGGTGCCATGC 61.896 66.667 0.00 4.93 42.06 4.06
5714 6312 2.441532 GCATCCAGGTGCCATGCT 60.442 61.111 3.96 0.00 39.92 3.79
5715 6313 2.056223 GCATCCAGGTGCCATGCTT 61.056 57.895 3.96 0.00 39.92 3.91
5716 6314 1.813859 CATCCAGGTGCCATGCTTG 59.186 57.895 0.00 0.00 0.00 4.01
5724 6322 1.600356 TGCCATGCTTGCTTGACGA 60.600 52.632 9.60 0.00 0.00 4.20
5876 6474 1.895051 CGTTGCGTTCCATTTCCATC 58.105 50.000 0.00 0.00 0.00 3.51
5968 6569 1.992667 CTGCGTCGATAAAGCACTTCA 59.007 47.619 0.00 0.00 37.45 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.955458 AAACAGGGGTTGGGCTGGAA 61.955 55.000 0.00 0.00 37.30 3.53
1 2 2.366153 GAAACAGGGGTTGGGCTGGA 62.366 60.000 0.00 0.00 37.30 3.86
2 3 1.908299 GAAACAGGGGTTGGGCTGG 60.908 63.158 0.00 0.00 37.30 4.85
3 4 2.268076 CGAAACAGGGGTTGGGCTG 61.268 63.158 0.00 0.00 37.30 4.85
4 5 1.789576 ATCGAAACAGGGGTTGGGCT 61.790 55.000 0.00 0.00 37.30 5.19
5 6 1.304134 ATCGAAACAGGGGTTGGGC 60.304 57.895 0.00 0.00 37.30 5.36
6 7 0.037590 TCATCGAAACAGGGGTTGGG 59.962 55.000 0.00 0.00 37.30 4.12
7 8 1.745087 CATCATCGAAACAGGGGTTGG 59.255 52.381 0.00 0.00 37.30 3.77
8 9 1.133025 GCATCATCGAAACAGGGGTTG 59.867 52.381 0.00 0.00 37.30 3.77
9 10 1.463674 GCATCATCGAAACAGGGGTT 58.536 50.000 0.00 0.00 39.43 4.11
10 11 0.744414 CGCATCATCGAAACAGGGGT 60.744 55.000 0.00 0.00 0.00 4.95
11 12 0.744414 ACGCATCATCGAAACAGGGG 60.744 55.000 0.00 0.00 0.00 4.79
12 13 0.652592 GACGCATCATCGAAACAGGG 59.347 55.000 0.00 0.00 0.00 4.45
13 14 1.645034 AGACGCATCATCGAAACAGG 58.355 50.000 0.00 0.00 0.00 4.00
14 15 2.217393 GCTAGACGCATCATCGAAACAG 59.783 50.000 0.00 0.00 38.92 3.16
15 16 2.193447 GCTAGACGCATCATCGAAACA 58.807 47.619 0.00 0.00 38.92 2.83
16 17 2.193447 TGCTAGACGCATCATCGAAAC 58.807 47.619 0.00 0.00 45.47 2.78
17 18 2.577449 TGCTAGACGCATCATCGAAA 57.423 45.000 0.00 0.00 45.47 3.46
27 28 0.872021 CCTCCAACGATGCTAGACGC 60.872 60.000 0.00 0.00 39.77 5.19
28 29 0.249073 CCCTCCAACGATGCTAGACG 60.249 60.000 0.00 0.00 0.00 4.18
29 30 0.530870 GCCCTCCAACGATGCTAGAC 60.531 60.000 0.00 0.00 0.00 2.59
30 31 1.823295 GCCCTCCAACGATGCTAGA 59.177 57.895 0.00 0.00 0.00 2.43
31 32 1.592669 CGCCCTCCAACGATGCTAG 60.593 63.158 0.00 0.00 0.00 3.42
32 33 2.355986 ACGCCCTCCAACGATGCTA 61.356 57.895 0.00 0.00 0.00 3.49
33 34 3.706373 ACGCCCTCCAACGATGCT 61.706 61.111 0.00 0.00 0.00 3.79
34 35 3.499737 CACGCCCTCCAACGATGC 61.500 66.667 0.00 0.00 0.00 3.91
35 36 2.047274 ACACGCCCTCCAACGATG 60.047 61.111 0.00 0.00 0.00 3.84
36 37 2.047274 CACACGCCCTCCAACGAT 60.047 61.111 0.00 0.00 0.00 3.73
37 38 4.308458 CCACACGCCCTCCAACGA 62.308 66.667 0.00 0.00 0.00 3.85
46 47 4.250305 AGACACACCCCACACGCC 62.250 66.667 0.00 0.00 0.00 5.68
47 48 2.665185 GAGACACACCCCACACGC 60.665 66.667 0.00 0.00 0.00 5.34
48 49 2.030562 GGAGACACACCCCACACG 59.969 66.667 0.00 0.00 0.00 4.49
49 50 1.071471 CTGGAGACACACCCCACAC 59.929 63.158 0.00 0.00 35.60 3.82
50 51 2.818169 GCTGGAGACACACCCCACA 61.818 63.158 0.00 0.00 35.60 4.17
51 52 2.032681 GCTGGAGACACACCCCAC 59.967 66.667 0.00 0.00 35.60 4.61
52 53 3.625897 CGCTGGAGACACACCCCA 61.626 66.667 0.00 0.00 35.60 4.96
53 54 4.394712 CCGCTGGAGACACACCCC 62.395 72.222 0.00 0.00 35.60 4.95
54 55 2.579684 GATCCGCTGGAGACACACCC 62.580 65.000 3.76 0.00 34.05 4.61
55 56 1.153549 GATCCGCTGGAGACACACC 60.154 63.158 3.76 0.00 34.05 4.16
56 57 0.179124 GAGATCCGCTGGAGACACAC 60.179 60.000 3.76 0.00 34.05 3.82
57 58 1.657751 CGAGATCCGCTGGAGACACA 61.658 60.000 3.76 0.00 34.05 3.72
58 59 1.064946 CGAGATCCGCTGGAGACAC 59.935 63.158 3.76 0.00 34.05 3.67
59 60 3.514417 CGAGATCCGCTGGAGACA 58.486 61.111 3.76 0.00 34.05 3.41
68 69 2.201436 ATCGAATCCCGCGAGATCCG 62.201 60.000 8.23 4.84 41.49 4.18
69 70 0.456995 GATCGAATCCCGCGAGATCC 60.457 60.000 8.23 0.00 41.49 3.36
70 71 0.241213 TGATCGAATCCCGCGAGATC 59.759 55.000 8.23 11.94 41.49 2.75
71 72 0.039074 GTGATCGAATCCCGCGAGAT 60.039 55.000 8.23 0.65 41.49 2.75
72 73 1.101635 AGTGATCGAATCCCGCGAGA 61.102 55.000 8.23 0.00 41.49 4.04
73 74 0.591659 TAGTGATCGAATCCCGCGAG 59.408 55.000 8.23 0.00 41.49 5.03
74 75 1.244816 ATAGTGATCGAATCCCGCGA 58.755 50.000 8.23 0.00 42.48 5.87
75 76 1.721389 CAATAGTGATCGAATCCCGCG 59.279 52.381 0.00 0.00 38.37 6.46
76 77 2.069273 CCAATAGTGATCGAATCCCGC 58.931 52.381 0.00 0.00 38.37 6.13
77 78 3.005897 AGACCAATAGTGATCGAATCCCG 59.994 47.826 0.00 0.00 40.25 5.14
78 79 4.608948 AGACCAATAGTGATCGAATCCC 57.391 45.455 0.00 0.00 0.00 3.85
79 80 4.681942 CGAAGACCAATAGTGATCGAATCC 59.318 45.833 0.00 0.00 35.98 3.01
80 81 4.681942 CCGAAGACCAATAGTGATCGAATC 59.318 45.833 0.00 0.00 35.98 2.52
81 82 4.099573 ACCGAAGACCAATAGTGATCGAAT 59.900 41.667 0.00 0.00 35.98 3.34
82 83 3.446161 ACCGAAGACCAATAGTGATCGAA 59.554 43.478 0.00 0.00 35.98 3.71
83 84 3.021695 ACCGAAGACCAATAGTGATCGA 58.978 45.455 0.00 0.00 35.98 3.59
84 85 3.116300 CACCGAAGACCAATAGTGATCG 58.884 50.000 0.00 0.00 34.51 3.69
85 86 4.386867 TCACCGAAGACCAATAGTGATC 57.613 45.455 0.00 0.00 29.75 2.92
86 87 4.819105 TTCACCGAAGACCAATAGTGAT 57.181 40.909 0.00 0.00 34.48 3.06
87 88 4.466370 AGATTCACCGAAGACCAATAGTGA 59.534 41.667 0.00 0.00 32.71 3.41
88 89 4.759782 AGATTCACCGAAGACCAATAGTG 58.240 43.478 0.00 0.00 0.00 2.74
89 90 6.732896 ATAGATTCACCGAAGACCAATAGT 57.267 37.500 0.00 0.00 0.00 2.12
90 91 7.041780 CCAAATAGATTCACCGAAGACCAATAG 60.042 40.741 0.00 0.00 0.00 1.73
91 92 6.765989 CCAAATAGATTCACCGAAGACCAATA 59.234 38.462 0.00 0.00 0.00 1.90
92 93 5.590259 CCAAATAGATTCACCGAAGACCAAT 59.410 40.000 0.00 0.00 0.00 3.16
93 94 4.941263 CCAAATAGATTCACCGAAGACCAA 59.059 41.667 0.00 0.00 0.00 3.67
94 95 4.224147 TCCAAATAGATTCACCGAAGACCA 59.776 41.667 0.00 0.00 0.00 4.02
95 96 4.766375 TCCAAATAGATTCACCGAAGACC 58.234 43.478 0.00 0.00 0.00 3.85
96 97 6.284459 AGATCCAAATAGATTCACCGAAGAC 58.716 40.000 0.00 0.00 0.00 3.01
97 98 6.485830 AGATCCAAATAGATTCACCGAAGA 57.514 37.500 0.00 0.00 0.00 2.87
98 99 7.437748 ACTAGATCCAAATAGATTCACCGAAG 58.562 38.462 0.00 0.00 0.00 3.79
99 100 7.287927 AGACTAGATCCAAATAGATTCACCGAA 59.712 37.037 0.00 0.00 0.00 4.30
100 101 6.778069 AGACTAGATCCAAATAGATTCACCGA 59.222 38.462 0.00 0.00 0.00 4.69
101 102 6.987386 AGACTAGATCCAAATAGATTCACCG 58.013 40.000 0.00 0.00 0.00 4.94
111 112 9.535878 GAAGACGAATAAAGACTAGATCCAAAT 57.464 33.333 0.00 0.00 0.00 2.32
112 113 7.701078 CGAAGACGAATAAAGACTAGATCCAAA 59.299 37.037 0.00 0.00 42.66 3.28
113 114 7.148120 ACGAAGACGAATAAAGACTAGATCCAA 60.148 37.037 0.00 0.00 42.66 3.53
114 115 6.318144 ACGAAGACGAATAAAGACTAGATCCA 59.682 38.462 0.00 0.00 42.66 3.41
115 116 6.727215 ACGAAGACGAATAAAGACTAGATCC 58.273 40.000 0.00 0.00 42.66 3.36
116 117 8.617761 AAACGAAGACGAATAAAGACTAGATC 57.382 34.615 0.00 0.00 42.66 2.75
120 121 9.722056 GGTATAAACGAAGACGAATAAAGACTA 57.278 33.333 0.00 0.00 42.66 2.59
121 122 8.465201 AGGTATAAACGAAGACGAATAAAGACT 58.535 33.333 0.00 0.00 42.66 3.24
122 123 8.626093 AGGTATAAACGAAGACGAATAAAGAC 57.374 34.615 0.00 0.00 42.66 3.01
125 126 9.023967 GCTAAGGTATAAACGAAGACGAATAAA 57.976 33.333 0.00 0.00 42.66 1.40
126 127 8.190122 TGCTAAGGTATAAACGAAGACGAATAA 58.810 33.333 0.00 0.00 42.66 1.40
127 128 7.645340 GTGCTAAGGTATAAACGAAGACGAATA 59.355 37.037 0.00 0.00 42.66 1.75
128 129 6.474751 GTGCTAAGGTATAAACGAAGACGAAT 59.525 38.462 0.00 0.00 42.66 3.34
129 130 5.801947 GTGCTAAGGTATAAACGAAGACGAA 59.198 40.000 0.00 0.00 42.66 3.85
130 131 5.335127 GTGCTAAGGTATAAACGAAGACGA 58.665 41.667 0.00 0.00 42.66 4.20
131 132 4.203764 CGTGCTAAGGTATAAACGAAGACG 59.796 45.833 0.00 0.00 45.75 4.18
132 133 5.228843 GTCGTGCTAAGGTATAAACGAAGAC 59.771 44.000 0.00 0.00 41.17 3.01
133 134 5.335127 GTCGTGCTAAGGTATAAACGAAGA 58.665 41.667 0.00 0.00 41.17 2.87
134 135 4.203764 CGTCGTGCTAAGGTATAAACGAAG 59.796 45.833 0.00 0.00 41.17 3.79
135 136 4.097714 CGTCGTGCTAAGGTATAAACGAA 58.902 43.478 0.00 0.00 41.17 3.85
136 137 3.373748 TCGTCGTGCTAAGGTATAAACGA 59.626 43.478 0.00 0.00 37.68 3.85
137 138 3.479949 GTCGTCGTGCTAAGGTATAAACG 59.520 47.826 0.00 0.00 0.00 3.60
138 139 4.666237 AGTCGTCGTGCTAAGGTATAAAC 58.334 43.478 0.00 0.00 0.00 2.01
139 140 4.970662 AGTCGTCGTGCTAAGGTATAAA 57.029 40.909 0.00 0.00 0.00 1.40
140 141 4.970662 AAGTCGTCGTGCTAAGGTATAA 57.029 40.909 0.00 0.00 0.00 0.98
141 142 4.201950 GGAAAGTCGTCGTGCTAAGGTATA 60.202 45.833 0.00 0.00 0.00 1.47
142 143 3.428589 GGAAAGTCGTCGTGCTAAGGTAT 60.429 47.826 0.00 0.00 0.00 2.73
143 144 2.095059 GGAAAGTCGTCGTGCTAAGGTA 60.095 50.000 0.00 0.00 0.00 3.08
144 145 1.336609 GGAAAGTCGTCGTGCTAAGGT 60.337 52.381 0.00 0.00 0.00 3.50
145 146 1.347320 GGAAAGTCGTCGTGCTAAGG 58.653 55.000 0.00 0.00 0.00 2.69
146 147 0.982673 CGGAAAGTCGTCGTGCTAAG 59.017 55.000 0.00 0.00 0.00 2.18
147 148 0.592637 TCGGAAAGTCGTCGTGCTAA 59.407 50.000 0.00 0.00 0.00 3.09
148 149 0.110056 GTCGGAAAGTCGTCGTGCTA 60.110 55.000 0.00 0.00 0.00 3.49
149 150 1.371389 GTCGGAAAGTCGTCGTGCT 60.371 57.895 0.00 0.00 0.00 4.40
150 151 1.371389 AGTCGGAAAGTCGTCGTGC 60.371 57.895 0.00 0.00 0.00 5.34
151 152 0.317603 ACAGTCGGAAAGTCGTCGTG 60.318 55.000 0.00 0.00 0.00 4.35
152 153 0.040603 GACAGTCGGAAAGTCGTCGT 60.041 55.000 0.00 0.00 0.00 4.34
153 154 0.040692 TGACAGTCGGAAAGTCGTCG 60.041 55.000 0.00 0.00 35.09 5.12
154 155 1.785430 GTTGACAGTCGGAAAGTCGTC 59.215 52.381 0.00 0.00 35.09 4.20
155 156 1.537562 GGTTGACAGTCGGAAAGTCGT 60.538 52.381 0.00 0.00 35.09 4.34
156 157 1.137513 GGTTGACAGTCGGAAAGTCG 58.862 55.000 0.00 0.00 35.09 4.18
157 158 1.865340 GTGGTTGACAGTCGGAAAGTC 59.135 52.381 0.00 4.62 0.00 3.01
158 159 1.208535 TGTGGTTGACAGTCGGAAAGT 59.791 47.619 0.00 0.00 0.00 2.66
159 160 1.948104 TGTGGTTGACAGTCGGAAAG 58.052 50.000 0.00 0.00 0.00 2.62
160 161 2.011222 GTTGTGGTTGACAGTCGGAAA 58.989 47.619 0.00 0.00 35.44 3.13
161 162 1.066071 TGTTGTGGTTGACAGTCGGAA 60.066 47.619 0.00 0.00 35.44 4.30
162 163 0.537653 TGTTGTGGTTGACAGTCGGA 59.462 50.000 0.00 0.00 35.44 4.55
163 164 0.655733 GTGTTGTGGTTGACAGTCGG 59.344 55.000 0.00 0.00 35.44 4.79
164 165 0.300491 CGTGTTGTGGTTGACAGTCG 59.700 55.000 0.00 0.00 35.44 4.18
165 166 1.365699 ACGTGTTGTGGTTGACAGTC 58.634 50.000 0.00 0.00 35.44 3.51
166 167 1.816074 AACGTGTTGTGGTTGACAGT 58.184 45.000 0.00 0.00 35.44 3.55
167 168 2.911819 AAACGTGTTGTGGTTGACAG 57.088 45.000 0.00 0.00 35.44 3.51
168 169 2.552743 TCAAAACGTGTTGTGGTTGACA 59.447 40.909 17.81 0.00 33.04 3.58
169 170 2.912345 GTCAAAACGTGTTGTGGTTGAC 59.088 45.455 17.81 4.37 43.46 3.18
170 171 2.095161 GGTCAAAACGTGTTGTGGTTGA 60.095 45.455 17.81 0.00 34.65 3.18
171 172 2.255316 GGTCAAAACGTGTTGTGGTTG 58.745 47.619 17.81 0.00 0.00 3.77
172 173 1.202817 GGGTCAAAACGTGTTGTGGTT 59.797 47.619 17.81 0.00 0.00 3.67
173 174 0.812549 GGGTCAAAACGTGTTGTGGT 59.187 50.000 17.81 0.00 0.00 4.16
174 175 0.248296 CGGGTCAAAACGTGTTGTGG 60.248 55.000 17.81 2.93 0.00 4.17
175 176 0.248296 CCGGGTCAAAACGTGTTGTG 60.248 55.000 17.81 7.00 0.00 3.33
176 177 1.995646 GCCGGGTCAAAACGTGTTGT 61.996 55.000 17.81 0.00 0.00 3.32
177 178 1.298788 GCCGGGTCAAAACGTGTTG 60.299 57.895 12.50 12.50 0.00 3.33
178 179 1.441732 GAGCCGGGTCAAAACGTGTT 61.442 55.000 28.27 0.00 0.00 3.32
179 180 1.890510 GAGCCGGGTCAAAACGTGT 60.891 57.895 28.27 0.00 0.00 4.49
180 181 2.613506 GGAGCCGGGTCAAAACGTG 61.614 63.158 32.94 0.00 0.00 4.49
181 182 2.281276 GGAGCCGGGTCAAAACGT 60.281 61.111 32.94 0.00 0.00 3.99
182 183 1.241315 AATGGAGCCGGGTCAAAACG 61.241 55.000 32.94 0.00 0.00 3.60
183 184 0.243636 CAATGGAGCCGGGTCAAAAC 59.756 55.000 32.94 17.22 0.00 2.43
184 185 0.111446 TCAATGGAGCCGGGTCAAAA 59.889 50.000 32.94 19.09 0.00 2.44
185 186 0.322456 CTCAATGGAGCCGGGTCAAA 60.322 55.000 32.94 21.59 33.67 2.69
186 187 1.198094 TCTCAATGGAGCCGGGTCAA 61.198 55.000 32.94 24.89 41.13 3.18
187 188 1.612146 TCTCAATGGAGCCGGGTCA 60.612 57.895 32.94 20.02 41.13 4.02
188 189 1.144936 CTCTCAATGGAGCCGGGTC 59.855 63.158 25.56 25.56 41.13 4.46
189 190 1.306141 TCTCTCAATGGAGCCGGGT 60.306 57.895 5.45 5.45 41.13 5.28
190 191 1.445095 CTCTCTCAATGGAGCCGGG 59.555 63.158 2.18 0.00 41.13 5.73
191 192 1.333636 ACCTCTCTCAATGGAGCCGG 61.334 60.000 0.00 0.00 41.13 6.13
192 193 0.179089 CACCTCTCTCAATGGAGCCG 60.179 60.000 0.00 0.00 41.13 5.52
193 194 0.463474 GCACCTCTCTCAATGGAGCC 60.463 60.000 0.00 0.00 41.13 4.70
194 195 0.809241 CGCACCTCTCTCAATGGAGC 60.809 60.000 0.00 0.00 41.13 4.70
195 196 0.820226 TCGCACCTCTCTCAATGGAG 59.180 55.000 0.00 0.00 42.80 3.86
196 197 1.137675 CATCGCACCTCTCTCAATGGA 59.862 52.381 0.00 0.00 0.00 3.41
197 198 1.137675 TCATCGCACCTCTCTCAATGG 59.862 52.381 0.00 0.00 0.00 3.16
198 199 2.200067 GTCATCGCACCTCTCTCAATG 58.800 52.381 0.00 0.00 0.00 2.82
199 200 1.202348 CGTCATCGCACCTCTCTCAAT 60.202 52.381 0.00 0.00 0.00 2.57
200 201 0.171231 CGTCATCGCACCTCTCTCAA 59.829 55.000 0.00 0.00 0.00 3.02
201 202 1.657751 CCGTCATCGCACCTCTCTCA 61.658 60.000 0.00 0.00 35.54 3.27
202 203 1.064946 CCGTCATCGCACCTCTCTC 59.935 63.158 0.00 0.00 35.54 3.20
203 204 3.069980 GCCGTCATCGCACCTCTCT 62.070 63.158 0.00 0.00 35.54 3.10
204 205 2.583593 GCCGTCATCGCACCTCTC 60.584 66.667 0.00 0.00 35.54 3.20
205 206 4.498520 CGCCGTCATCGCACCTCT 62.499 66.667 0.00 0.00 35.54 3.69
206 207 4.492160 TCGCCGTCATCGCACCTC 62.492 66.667 0.00 0.00 35.54 3.85
207 208 4.796231 GTCGCCGTCATCGCACCT 62.796 66.667 0.00 0.00 35.54 4.00
209 210 3.838795 GTGTCGCCGTCATCGCAC 61.839 66.667 0.00 0.00 35.54 5.34
210 211 4.350441 TGTGTCGCCGTCATCGCA 62.350 61.111 0.00 0.00 35.54 5.10
211 212 3.838795 GTGTGTCGCCGTCATCGC 61.839 66.667 0.00 0.00 35.54 4.58
212 213 1.282248 AAAGTGTGTCGCCGTCATCG 61.282 55.000 0.00 0.00 0.00 3.84
213 214 0.865769 AAAAGTGTGTCGCCGTCATC 59.134 50.000 0.00 0.00 0.00 2.92
214 215 0.586319 CAAAAGTGTGTCGCCGTCAT 59.414 50.000 0.00 0.00 0.00 3.06
215 216 0.460459 TCAAAAGTGTGTCGCCGTCA 60.460 50.000 0.00 0.00 0.00 4.35
216 217 0.042448 GTCAAAAGTGTGTCGCCGTC 60.042 55.000 0.00 0.00 0.00 4.79
217 218 0.461339 AGTCAAAAGTGTGTCGCCGT 60.461 50.000 0.00 0.00 0.00 5.68
218 219 0.655733 AAGTCAAAAGTGTGTCGCCG 59.344 50.000 0.00 0.00 0.00 6.46
219 220 1.859998 GCAAGTCAAAAGTGTGTCGCC 60.860 52.381 0.00 0.00 0.00 5.54
220 221 1.064060 AGCAAGTCAAAAGTGTGTCGC 59.936 47.619 0.00 0.00 0.00 5.19
221 222 3.405170 AAGCAAGTCAAAAGTGTGTCG 57.595 42.857 0.00 0.00 0.00 4.35
222 223 3.859386 CCAAAGCAAGTCAAAAGTGTGTC 59.141 43.478 0.00 0.00 0.00 3.67
223 224 3.258123 ACCAAAGCAAGTCAAAAGTGTGT 59.742 39.130 0.00 0.00 0.00 3.72
224 225 3.613737 CACCAAAGCAAGTCAAAAGTGTG 59.386 43.478 0.00 0.00 0.00 3.82
225 226 3.509575 TCACCAAAGCAAGTCAAAAGTGT 59.490 39.130 0.00 0.00 0.00 3.55
226 227 4.108699 TCACCAAAGCAAGTCAAAAGTG 57.891 40.909 0.00 0.00 0.00 3.16
227 228 5.111293 CAATCACCAAAGCAAGTCAAAAGT 58.889 37.500 0.00 0.00 0.00 2.66
228 229 4.025480 GCAATCACCAAAGCAAGTCAAAAG 60.025 41.667 0.00 0.00 0.00 2.27
229 230 3.870419 GCAATCACCAAAGCAAGTCAAAA 59.130 39.130 0.00 0.00 0.00 2.44
230 231 3.118847 TGCAATCACCAAAGCAAGTCAAA 60.119 39.130 0.00 0.00 33.48 2.69
231 232 2.429971 TGCAATCACCAAAGCAAGTCAA 59.570 40.909 0.00 0.00 33.48 3.18
232 233 2.030371 TGCAATCACCAAAGCAAGTCA 58.970 42.857 0.00 0.00 33.48 3.41
233 234 2.669364 CTGCAATCACCAAAGCAAGTC 58.331 47.619 0.00 0.00 36.44 3.01
234 235 1.269936 GCTGCAATCACCAAAGCAAGT 60.270 47.619 0.00 0.00 36.44 3.16
235 236 1.425412 GCTGCAATCACCAAAGCAAG 58.575 50.000 0.00 0.00 36.44 4.01
236 237 0.318869 CGCTGCAATCACCAAAGCAA 60.319 50.000 0.00 0.00 36.44 3.91
237 238 1.286570 CGCTGCAATCACCAAAGCA 59.713 52.632 0.00 0.00 33.41 3.91
238 239 1.444895 CCGCTGCAATCACCAAAGC 60.445 57.895 0.00 0.00 0.00 3.51
239 240 0.169672 CTCCGCTGCAATCACCAAAG 59.830 55.000 0.00 0.00 0.00 2.77
240 241 1.243342 CCTCCGCTGCAATCACCAAA 61.243 55.000 0.00 0.00 0.00 3.28
241 242 1.675310 CCTCCGCTGCAATCACCAA 60.675 57.895 0.00 0.00 0.00 3.67
242 243 2.046023 CCTCCGCTGCAATCACCA 60.046 61.111 0.00 0.00 0.00 4.17
243 244 2.045926 ACCTCCGCTGCAATCACC 60.046 61.111 0.00 0.00 0.00 4.02
244 245 3.044059 GCACCTCCGCTGCAATCAC 62.044 63.158 0.00 0.00 34.56 3.06
245 246 2.747460 GCACCTCCGCTGCAATCA 60.747 61.111 0.00 0.00 34.56 2.57
246 247 3.869272 CGCACCTCCGCTGCAATC 61.869 66.667 0.00 0.00 34.00 2.67
247 248 4.393155 TCGCACCTCCGCTGCAAT 62.393 61.111 0.00 0.00 34.00 3.56
255 256 4.773117 GACCGTCGTCGCACCTCC 62.773 72.222 0.00 0.00 35.54 4.30
256 257 4.034258 TGACCGTCGTCGCACCTC 62.034 66.667 0.00 0.00 42.37 3.85
257 258 4.338539 GTGACCGTCGTCGCACCT 62.339 66.667 0.00 0.00 46.73 4.00
266 267 4.072088 CAAAGGCGCGTGACCGTC 62.072 66.667 8.43 0.00 36.15 4.79
267 268 4.595538 TCAAAGGCGCGTGACCGT 62.596 61.111 8.43 0.00 36.15 4.83
268 269 4.072088 GTCAAAGGCGCGTGACCG 62.072 66.667 20.67 4.57 38.57 4.79
269 270 1.352156 CTAGTCAAAGGCGCGTGACC 61.352 60.000 25.03 8.41 44.30 4.02
270 271 0.388134 TCTAGTCAAAGGCGCGTGAC 60.388 55.000 22.68 22.68 43.70 3.67
271 272 0.530744 ATCTAGTCAAAGGCGCGTGA 59.469 50.000 8.43 2.77 0.00 4.35
272 273 0.924090 GATCTAGTCAAAGGCGCGTG 59.076 55.000 8.43 0.00 0.00 5.34
273 274 0.179108 GGATCTAGTCAAAGGCGCGT 60.179 55.000 8.43 0.00 0.00 6.01
274 275 1.209275 CGGATCTAGTCAAAGGCGCG 61.209 60.000 0.00 0.00 0.00 6.86
275 276 0.876342 CCGGATCTAGTCAAAGGCGC 60.876 60.000 0.00 0.00 0.00 6.53
276 277 0.460311 ACCGGATCTAGTCAAAGGCG 59.540 55.000 9.46 0.00 0.00 5.52
277 278 1.480954 TCACCGGATCTAGTCAAAGGC 59.519 52.381 9.46 0.00 0.00 4.35
278 279 4.122776 CAATCACCGGATCTAGTCAAAGG 58.877 47.826 9.46 0.00 31.88 3.11
279 280 3.557595 GCAATCACCGGATCTAGTCAAAG 59.442 47.826 9.46 0.00 31.88 2.77
280 281 3.055458 TGCAATCACCGGATCTAGTCAAA 60.055 43.478 9.46 0.00 31.88 2.69
281 282 2.499693 TGCAATCACCGGATCTAGTCAA 59.500 45.455 9.46 0.00 31.88 3.18
282 283 2.101415 CTGCAATCACCGGATCTAGTCA 59.899 50.000 9.46 0.00 31.88 3.41
283 284 2.748605 CTGCAATCACCGGATCTAGTC 58.251 52.381 9.46 0.00 31.88 2.59
284 285 1.202580 GCTGCAATCACCGGATCTAGT 60.203 52.381 9.46 0.00 31.88 2.57
285 286 1.069823 AGCTGCAATCACCGGATCTAG 59.930 52.381 9.46 0.00 31.88 2.43
286 287 1.123077 AGCTGCAATCACCGGATCTA 58.877 50.000 9.46 0.00 31.88 1.98
287 288 0.463295 CAGCTGCAATCACCGGATCT 60.463 55.000 9.46 0.00 31.88 2.75
288 289 0.745845 ACAGCTGCAATCACCGGATC 60.746 55.000 15.27 0.00 31.88 3.36
289 290 0.745845 GACAGCTGCAATCACCGGAT 60.746 55.000 15.27 0.00 34.43 4.18
290 291 1.375908 GACAGCTGCAATCACCGGA 60.376 57.895 15.27 0.00 0.00 5.14
291 292 2.743752 CGACAGCTGCAATCACCGG 61.744 63.158 15.27 0.00 0.00 5.28
292 293 2.780643 CGACAGCTGCAATCACCG 59.219 61.111 15.27 2.48 0.00 4.94
293 294 2.482374 GCGACAGCTGCAATCACC 59.518 61.111 15.27 0.00 41.01 4.02
303 304 1.281899 GTAGACCATCAAGCGACAGC 58.718 55.000 0.00 0.00 45.58 4.40
304 305 1.132453 TCGTAGACCATCAAGCGACAG 59.868 52.381 0.00 0.00 0.00 3.51
305 306 1.170442 TCGTAGACCATCAAGCGACA 58.830 50.000 0.00 0.00 0.00 4.35
306 307 1.918609 GTTCGTAGACCATCAAGCGAC 59.081 52.381 0.00 0.00 34.32 5.19
307 308 1.542472 TGTTCGTAGACCATCAAGCGA 59.458 47.619 0.00 0.00 34.32 4.93
308 309 1.990799 TGTTCGTAGACCATCAAGCG 58.009 50.000 0.00 0.00 34.32 4.68
309 310 2.609459 CCATGTTCGTAGACCATCAAGC 59.391 50.000 0.00 0.00 37.64 4.01
310 311 4.123497 TCCATGTTCGTAGACCATCAAG 57.877 45.455 0.00 0.00 37.64 3.02
311 312 4.081142 ACATCCATGTTCGTAGACCATCAA 60.081 41.667 0.00 0.00 37.64 2.57
312 313 3.450817 ACATCCATGTTCGTAGACCATCA 59.549 43.478 0.00 0.00 37.64 3.07
313 314 4.060038 ACATCCATGTTCGTAGACCATC 57.940 45.455 0.00 0.00 37.64 3.51
314 315 5.128827 AGTTACATCCATGTTCGTAGACCAT 59.871 40.000 0.00 0.00 41.42 3.55
315 316 4.464951 AGTTACATCCATGTTCGTAGACCA 59.535 41.667 0.00 0.00 41.97 4.02
316 317 5.007385 AGTTACATCCATGTTCGTAGACC 57.993 43.478 0.00 0.00 41.97 3.85
317 318 6.963049 AAAGTTACATCCATGTTCGTAGAC 57.037 37.500 0.00 0.00 41.97 2.59
318 319 6.932400 ACAAAAGTTACATCCATGTTCGTAGA 59.068 34.615 0.00 0.00 41.97 2.59
319 320 7.129109 ACAAAAGTTACATCCATGTTCGTAG 57.871 36.000 0.00 0.00 41.97 3.51
320 321 7.499321 AACAAAAGTTACATCCATGTTCGTA 57.501 32.000 0.00 0.00 41.97 3.43
321 322 6.385649 AACAAAAGTTACATCCATGTTCGT 57.614 33.333 0.00 0.00 41.97 3.85
322 323 8.964420 AATAACAAAAGTTACATCCATGTTCG 57.036 30.769 0.00 0.00 41.97 3.95
325 326 9.912634 CAGAAATAACAAAAGTTACATCCATGT 57.087 29.630 0.00 0.00 44.48 3.21
326 327 9.912634 ACAGAAATAACAAAAGTTACATCCATG 57.087 29.630 0.00 0.00 0.00 3.66
338 339 9.883142 AGGACAATGAAAACAGAAATAACAAAA 57.117 25.926 0.00 0.00 0.00 2.44
339 340 9.311916 CAGGACAATGAAAACAGAAATAACAAA 57.688 29.630 0.00 0.00 0.00 2.83
340 341 7.437862 GCAGGACAATGAAAACAGAAATAACAA 59.562 33.333 0.00 0.00 0.00 2.83
341 342 6.922957 GCAGGACAATGAAAACAGAAATAACA 59.077 34.615 0.00 0.00 0.00 2.41
342 343 6.366061 GGCAGGACAATGAAAACAGAAATAAC 59.634 38.462 0.00 0.00 0.00 1.89
343 344 6.041409 TGGCAGGACAATGAAAACAGAAATAA 59.959 34.615 0.00 0.00 0.00 1.40
344 345 5.538053 TGGCAGGACAATGAAAACAGAAATA 59.462 36.000 0.00 0.00 0.00 1.40
345 346 4.344679 TGGCAGGACAATGAAAACAGAAAT 59.655 37.500 0.00 0.00 0.00 2.17
346 347 3.703556 TGGCAGGACAATGAAAACAGAAA 59.296 39.130 0.00 0.00 0.00 2.52
347 348 3.068024 GTGGCAGGACAATGAAAACAGAA 59.932 43.478 0.00 0.00 0.00 3.02
348 349 2.622942 GTGGCAGGACAATGAAAACAGA 59.377 45.455 0.00 0.00 0.00 3.41
349 350 2.605338 CGTGGCAGGACAATGAAAACAG 60.605 50.000 0.00 0.00 0.00 3.16
350 351 1.336440 CGTGGCAGGACAATGAAAACA 59.664 47.619 0.00 0.00 0.00 2.83
351 352 1.606668 TCGTGGCAGGACAATGAAAAC 59.393 47.619 5.66 0.00 0.00 2.43
352 353 1.606668 GTCGTGGCAGGACAATGAAAA 59.393 47.619 29.56 0.00 33.54 2.29
353 354 1.234821 GTCGTGGCAGGACAATGAAA 58.765 50.000 29.56 0.00 33.54 2.69
354 355 0.948623 CGTCGTGGCAGGACAATGAA 60.949 55.000 32.04 0.01 32.93 2.57
355 356 1.374125 CGTCGTGGCAGGACAATGA 60.374 57.895 32.04 0.73 32.93 2.57
356 357 1.667830 ACGTCGTGGCAGGACAATG 60.668 57.895 32.04 21.40 32.93 2.82
357 358 1.667830 CACGTCGTGGCAGGACAAT 60.668 57.895 32.04 20.53 32.93 2.71
358 359 2.094757 ATCACGTCGTGGCAGGACAA 62.095 55.000 32.04 20.42 32.93 3.18
359 360 2.570284 ATCACGTCGTGGCAGGACA 61.570 57.895 32.04 18.24 32.93 4.02
360 361 2.094659 CATCACGTCGTGGCAGGAC 61.095 63.158 26.03 26.03 33.87 3.85
361 362 1.811645 TTCATCACGTCGTGGCAGGA 61.812 55.000 24.33 11.08 33.87 3.86
362 363 0.740868 ATTCATCACGTCGTGGCAGG 60.741 55.000 24.33 8.84 33.87 4.85
363 364 1.854743 CTATTCATCACGTCGTGGCAG 59.145 52.381 24.33 14.39 33.87 4.85
364 365 1.474879 TCTATTCATCACGTCGTGGCA 59.525 47.619 24.33 7.39 33.87 4.92
365 366 2.203800 TCTATTCATCACGTCGTGGC 57.796 50.000 24.33 0.00 33.87 5.01
366 367 3.964909 TGATCTATTCATCACGTCGTGG 58.035 45.455 24.33 10.19 33.87 4.94
367 368 5.949233 TTTGATCTATTCATCACGTCGTG 57.051 39.130 19.38 19.38 32.28 4.35
368 369 6.100004 ACTTTTGATCTATTCATCACGTCGT 58.900 36.000 0.00 0.00 32.28 4.34
369 370 6.575083 ACTTTTGATCTATTCATCACGTCG 57.425 37.500 0.00 0.00 32.28 5.12
370 371 7.905493 GGAAACTTTTGATCTATTCATCACGTC 59.095 37.037 0.00 0.00 32.28 4.34
371 372 7.607991 AGGAAACTTTTGATCTATTCATCACGT 59.392 33.333 0.00 0.00 37.44 4.49
372 373 7.978982 AGGAAACTTTTGATCTATTCATCACG 58.021 34.615 0.00 0.00 37.44 4.35
395 396 9.952341 CGTCTTGTTTTTCTTTTCTTTTTAAGG 57.048 29.630 0.00 0.00 0.00 2.69
398 399 9.680315 TGACGTCTTGTTTTTCTTTTCTTTTTA 57.320 25.926 17.92 0.00 0.00 1.52
399 400 8.582433 TGACGTCTTGTTTTTCTTTTCTTTTT 57.418 26.923 17.92 0.00 0.00 1.94
400 401 8.582433 TTGACGTCTTGTTTTTCTTTTCTTTT 57.418 26.923 17.92 0.00 0.00 2.27
401 402 7.328493 CCTTGACGTCTTGTTTTTCTTTTCTTT 59.672 33.333 17.92 0.00 0.00 2.52
402 403 6.806739 CCTTGACGTCTTGTTTTTCTTTTCTT 59.193 34.615 17.92 0.00 0.00 2.52
403 404 6.072119 ACCTTGACGTCTTGTTTTTCTTTTCT 60.072 34.615 17.92 0.00 0.00 2.52
404 405 6.090783 ACCTTGACGTCTTGTTTTTCTTTTC 58.909 36.000 17.92 0.00 0.00 2.29
405 406 6.020971 ACCTTGACGTCTTGTTTTTCTTTT 57.979 33.333 17.92 0.00 0.00 2.27
406 407 5.182380 TGACCTTGACGTCTTGTTTTTCTTT 59.818 36.000 17.92 0.00 33.70 2.52
407 408 4.698304 TGACCTTGACGTCTTGTTTTTCTT 59.302 37.500 17.92 0.00 33.70 2.52
408 409 4.258543 TGACCTTGACGTCTTGTTTTTCT 58.741 39.130 17.92 0.00 33.70 2.52
409 410 4.609691 TGACCTTGACGTCTTGTTTTTC 57.390 40.909 17.92 4.83 33.70 2.29
410 411 5.587043 TGTATGACCTTGACGTCTTGTTTTT 59.413 36.000 17.92 0.00 33.70 1.94
411 412 5.120399 TGTATGACCTTGACGTCTTGTTTT 58.880 37.500 17.92 5.59 33.70 2.43
412 413 4.699637 TGTATGACCTTGACGTCTTGTTT 58.300 39.130 17.92 5.89 33.70 2.83
413 414 4.330944 TGTATGACCTTGACGTCTTGTT 57.669 40.909 17.92 0.00 33.70 2.83
414 415 4.330944 TTGTATGACCTTGACGTCTTGT 57.669 40.909 17.92 10.80 33.70 3.16
415 416 4.509970 TGTTTGTATGACCTTGACGTCTTG 59.490 41.667 17.92 9.12 33.70 3.02
416 417 4.699637 TGTTTGTATGACCTTGACGTCTT 58.300 39.130 17.92 0.00 33.70 3.01
417 418 4.330944 TGTTTGTATGACCTTGACGTCT 57.669 40.909 17.92 0.00 33.70 4.18
418 419 4.084013 CCTTGTTTGTATGACCTTGACGTC 60.084 45.833 9.11 9.11 0.00 4.34
419 420 3.813166 CCTTGTTTGTATGACCTTGACGT 59.187 43.478 0.00 0.00 0.00 4.34
420 421 3.364964 GCCTTGTTTGTATGACCTTGACG 60.365 47.826 0.00 0.00 0.00 4.35
421 422 3.057526 GGCCTTGTTTGTATGACCTTGAC 60.058 47.826 0.00 0.00 0.00 3.18
422 423 3.153919 GGCCTTGTTTGTATGACCTTGA 58.846 45.455 0.00 0.00 0.00 3.02
423 424 2.231235 GGGCCTTGTTTGTATGACCTTG 59.769 50.000 0.84 0.00 0.00 3.61
424 425 2.525368 GGGCCTTGTTTGTATGACCTT 58.475 47.619 0.84 0.00 0.00 3.50
425 426 1.272480 GGGGCCTTGTTTGTATGACCT 60.272 52.381 0.84 0.00 0.00 3.85
426 427 1.182667 GGGGCCTTGTTTGTATGACC 58.817 55.000 0.84 0.00 0.00 4.02
427 428 0.808755 CGGGGCCTTGTTTGTATGAC 59.191 55.000 0.84 0.00 0.00 3.06
428 429 0.402504 ACGGGGCCTTGTTTGTATGA 59.597 50.000 0.84 0.00 0.00 2.15
429 430 1.253100 AACGGGGCCTTGTTTGTATG 58.747 50.000 0.84 0.00 0.00 2.39
430 431 1.890489 GAAACGGGGCCTTGTTTGTAT 59.110 47.619 24.96 7.70 38.35 2.29
431 432 1.320507 GAAACGGGGCCTTGTTTGTA 58.679 50.000 24.96 0.00 38.35 2.41
432 433 0.684805 TGAAACGGGGCCTTGTTTGT 60.685 50.000 24.96 8.60 38.35 2.83
433 434 0.461961 TTGAAACGGGGCCTTGTTTG 59.538 50.000 24.96 3.35 38.35 2.93
434 435 1.343142 GATTGAAACGGGGCCTTGTTT 59.657 47.619 21.68 21.68 40.77 2.83
435 436 0.966179 GATTGAAACGGGGCCTTGTT 59.034 50.000 0.84 6.15 0.00 2.83
436 437 0.178975 TGATTGAAACGGGGCCTTGT 60.179 50.000 0.84 0.00 0.00 3.16
437 438 0.965439 TTGATTGAAACGGGGCCTTG 59.035 50.000 0.84 0.00 0.00 3.61
438 439 1.343142 GTTTGATTGAAACGGGGCCTT 59.657 47.619 0.84 0.00 34.87 4.35
439 440 0.966179 GTTTGATTGAAACGGGGCCT 59.034 50.000 0.84 0.00 34.87 5.19
440 441 3.507597 GTTTGATTGAAACGGGGCC 57.492 52.632 0.00 0.00 34.87 5.80
446 447 7.148967 GGCGAAATCTACAAGTTTGATTGAAAC 60.149 37.037 0.00 0.00 43.89 2.78
447 448 6.861055 GGCGAAATCTACAAGTTTGATTGAAA 59.139 34.615 0.00 0.00 34.20 2.69
448 449 6.378582 GGCGAAATCTACAAGTTTGATTGAA 58.621 36.000 0.00 0.00 34.20 2.69
449 450 5.106317 GGGCGAAATCTACAAGTTTGATTGA 60.106 40.000 0.00 0.00 34.20 2.57
450 451 5.095490 GGGCGAAATCTACAAGTTTGATTG 58.905 41.667 0.00 0.00 36.22 2.67
451 452 4.142687 CGGGCGAAATCTACAAGTTTGATT 60.143 41.667 0.00 0.00 32.52 2.57
452 453 3.374058 CGGGCGAAATCTACAAGTTTGAT 59.626 43.478 0.00 0.00 0.00 2.57
453 454 2.739913 CGGGCGAAATCTACAAGTTTGA 59.260 45.455 0.00 0.00 0.00 2.69
454 455 2.482721 ACGGGCGAAATCTACAAGTTTG 59.517 45.455 0.00 0.00 0.00 2.93
455 456 2.774687 ACGGGCGAAATCTACAAGTTT 58.225 42.857 0.00 0.00 0.00 2.66
456 457 2.467566 ACGGGCGAAATCTACAAGTT 57.532 45.000 0.00 0.00 0.00 2.66
457 458 2.417787 GGTACGGGCGAAATCTACAAGT 60.418 50.000 0.00 0.00 0.00 3.16
458 459 2.159142 AGGTACGGGCGAAATCTACAAG 60.159 50.000 0.00 0.00 0.00 3.16
459 460 1.826720 AGGTACGGGCGAAATCTACAA 59.173 47.619 0.00 0.00 0.00 2.41
460 461 1.477553 AGGTACGGGCGAAATCTACA 58.522 50.000 0.00 0.00 0.00 2.74
461 462 2.591571 AAGGTACGGGCGAAATCTAC 57.408 50.000 0.00 0.00 0.00 2.59
462 463 3.615224 AAAAGGTACGGGCGAAATCTA 57.385 42.857 0.00 0.00 0.00 1.98
463 464 2.484742 AAAAGGTACGGGCGAAATCT 57.515 45.000 0.00 0.00 0.00 2.40
494 495 4.217118 TCTCTAGGTACGGGCGAAATATTC 59.783 45.833 0.00 0.00 0.00 1.75
495 496 4.147321 TCTCTAGGTACGGGCGAAATATT 58.853 43.478 0.00 0.00 0.00 1.28
496 497 3.757493 CTCTCTAGGTACGGGCGAAATAT 59.243 47.826 0.00 0.00 0.00 1.28
497 498 3.144506 CTCTCTAGGTACGGGCGAAATA 58.855 50.000 0.00 0.00 0.00 1.40
498 499 1.955080 CTCTCTAGGTACGGGCGAAAT 59.045 52.381 0.00 0.00 0.00 2.17
499 500 1.386533 CTCTCTAGGTACGGGCGAAA 58.613 55.000 0.00 0.00 0.00 3.46
500 501 0.465097 CCTCTCTAGGTACGGGCGAA 60.465 60.000 0.00 0.00 38.19 4.70
501 502 1.147824 CCTCTCTAGGTACGGGCGA 59.852 63.158 0.00 0.00 38.19 5.54
502 503 1.897615 CCCTCTCTAGGTACGGGCG 60.898 68.421 0.00 0.00 41.89 6.13
503 504 4.177673 CCCTCTCTAGGTACGGGC 57.822 66.667 0.00 0.00 41.89 6.13
504 505 1.897615 CGCCCTCTCTAGGTACGGG 60.898 68.421 0.00 0.00 41.89 5.28
505 506 0.465097 TTCGCCCTCTCTAGGTACGG 60.465 60.000 0.00 0.00 41.89 4.02
506 507 0.662085 GTTCGCCCTCTCTAGGTACG 59.338 60.000 0.00 0.00 41.89 3.67
507 508 0.662085 CGTTCGCCCTCTCTAGGTAC 59.338 60.000 0.00 0.00 41.89 3.34
508 509 0.543277 TCGTTCGCCCTCTCTAGGTA 59.457 55.000 0.00 0.00 41.89 3.08
509 510 0.323178 TTCGTTCGCCCTCTCTAGGT 60.323 55.000 0.00 0.00 41.89 3.08
510 511 0.382515 CTTCGTTCGCCCTCTCTAGG 59.617 60.000 0.00 0.00 43.25 3.02
511 512 0.382515 CCTTCGTTCGCCCTCTCTAG 59.617 60.000 0.00 0.00 0.00 2.43
512 513 0.034767 TCCTTCGTTCGCCCTCTCTA 60.035 55.000 0.00 0.00 0.00 2.43
513 514 0.684805 ATCCTTCGTTCGCCCTCTCT 60.685 55.000 0.00 0.00 0.00 3.10
514 515 0.249114 GATCCTTCGTTCGCCCTCTC 60.249 60.000 0.00 0.00 0.00 3.20
515 516 0.684805 AGATCCTTCGTTCGCCCTCT 60.685 55.000 0.00 0.00 0.00 3.69
516 517 0.249114 GAGATCCTTCGTTCGCCCTC 60.249 60.000 0.00 0.00 0.00 4.30
517 518 0.970937 TGAGATCCTTCGTTCGCCCT 60.971 55.000 0.00 0.00 0.00 5.19
518 519 0.108329 TTGAGATCCTTCGTTCGCCC 60.108 55.000 0.00 0.00 0.00 6.13
519 520 1.000145 GTTGAGATCCTTCGTTCGCC 59.000 55.000 0.00 0.00 0.00 5.54
520 521 1.997669 AGTTGAGATCCTTCGTTCGC 58.002 50.000 0.00 0.00 0.00 4.70
521 522 2.668457 CCAAGTTGAGATCCTTCGTTCG 59.332 50.000 3.87 0.00 0.00 3.95
522 523 3.003480 CCCAAGTTGAGATCCTTCGTTC 58.997 50.000 3.87 0.00 0.00 3.95
523 524 2.876079 GCCCAAGTTGAGATCCTTCGTT 60.876 50.000 3.87 0.00 0.00 3.85
524 525 1.339151 GCCCAAGTTGAGATCCTTCGT 60.339 52.381 3.87 0.00 0.00 3.85
525 526 1.373570 GCCCAAGTTGAGATCCTTCG 58.626 55.000 3.87 0.00 0.00 3.79
526 527 1.066143 TCGCCCAAGTTGAGATCCTTC 60.066 52.381 3.87 0.00 0.00 3.46
527 528 0.984230 TCGCCCAAGTTGAGATCCTT 59.016 50.000 3.87 0.00 0.00 3.36
528 529 0.984230 TTCGCCCAAGTTGAGATCCT 59.016 50.000 3.87 0.00 0.00 3.24
529 530 1.339151 ACTTCGCCCAAGTTGAGATCC 60.339 52.381 3.87 0.00 43.38 3.36
530 531 2.003301 GACTTCGCCCAAGTTGAGATC 58.997 52.381 3.87 0.00 46.10 2.75
531 532 1.673033 CGACTTCGCCCAAGTTGAGAT 60.673 52.381 3.87 0.00 46.33 2.75
532 533 0.319555 CGACTTCGCCCAAGTTGAGA 60.320 55.000 3.87 0.00 46.33 3.27
533 534 2.153913 CGACTTCGCCCAAGTTGAG 58.846 57.895 3.87 0.00 46.33 3.02
534 535 4.354155 CGACTTCGCCCAAGTTGA 57.646 55.556 3.87 0.00 46.33 3.18
546 547 4.612412 TTTGGGGCGTCGCGACTT 62.612 61.111 33.94 0.00 34.07 3.01
547 548 4.612412 TTTTGGGGCGTCGCGACT 62.612 61.111 33.94 0.00 34.07 4.18
548 549 4.379143 GTTTTGGGGCGTCGCGAC 62.379 66.667 28.96 28.96 0.00 5.19
549 550 4.912485 TGTTTTGGGGCGTCGCGA 62.912 61.111 3.71 3.71 0.00 5.87
550 551 2.938539 TTTTGTTTTGGGGCGTCGCG 62.939 55.000 11.75 0.00 0.00 5.87
551 552 1.227002 TTTTGTTTTGGGGCGTCGC 60.227 52.632 9.22 9.22 0.00 5.19
552 553 1.203600 CGTTTTGTTTTGGGGCGTCG 61.204 55.000 0.00 0.00 0.00 5.12
553 554 0.872451 CCGTTTTGTTTTGGGGCGTC 60.872 55.000 0.00 0.00 0.00 5.19
554 555 1.142097 CCGTTTTGTTTTGGGGCGT 59.858 52.632 0.00 0.00 0.00 5.68
555 556 1.142097 ACCGTTTTGTTTTGGGGCG 59.858 52.632 0.00 0.00 0.00 6.13
556 557 1.433053 GCACCGTTTTGTTTTGGGGC 61.433 55.000 0.00 0.00 44.81 5.80
557 558 0.176910 AGCACCGTTTTGTTTTGGGG 59.823 50.000 0.00 0.00 0.00 4.96
558 559 1.285578 CAGCACCGTTTTGTTTTGGG 58.714 50.000 0.00 0.00 0.00 4.12
559 560 0.649993 GCAGCACCGTTTTGTTTTGG 59.350 50.000 0.00 0.00 0.00 3.28
560 561 0.649993 GGCAGCACCGTTTTGTTTTG 59.350 50.000 0.00 0.00 0.00 2.44
561 562 0.534873 AGGCAGCACCGTTTTGTTTT 59.465 45.000 0.00 0.00 46.52 2.43
562 563 0.534873 AAGGCAGCACCGTTTTGTTT 59.465 45.000 0.00 0.00 46.52 2.83
563 564 0.534873 AAAGGCAGCACCGTTTTGTT 59.465 45.000 0.00 0.00 46.52 2.83
564 565 0.534873 AAAAGGCAGCACCGTTTTGT 59.465 45.000 4.29 0.00 46.50 2.83
565 566 3.360886 AAAAGGCAGCACCGTTTTG 57.639 47.368 4.29 0.00 46.50 2.44
568 569 3.744238 AAATAAAAAGGCAGCACCGTT 57.256 38.095 0.00 0.00 46.52 4.44
569 570 3.744238 AAAATAAAAAGGCAGCACCGT 57.256 38.095 0.00 0.00 46.52 4.83
588 589 4.376146 GCAGCACCATTTTACCTCAAAAA 58.624 39.130 0.00 0.00 39.51 1.94
589 590 3.244044 GGCAGCACCATTTTACCTCAAAA 60.244 43.478 0.00 0.00 40.34 2.44
590 591 2.298729 GGCAGCACCATTTTACCTCAAA 59.701 45.455 0.00 0.00 38.86 2.69
591 592 1.892474 GGCAGCACCATTTTACCTCAA 59.108 47.619 0.00 0.00 38.86 3.02
592 593 1.075374 AGGCAGCACCATTTTACCTCA 59.925 47.619 0.00 0.00 43.14 3.86
593 594 1.839424 AGGCAGCACCATTTTACCTC 58.161 50.000 0.00 0.00 43.14 3.85
594 595 3.449746 TTAGGCAGCACCATTTTACCT 57.550 42.857 0.00 0.00 43.14 3.08
595 596 4.682787 GAATTAGGCAGCACCATTTTACC 58.317 43.478 0.00 0.00 43.14 2.85
596 597 4.351192 CGAATTAGGCAGCACCATTTTAC 58.649 43.478 0.00 0.00 43.14 2.01
597 598 3.181491 GCGAATTAGGCAGCACCATTTTA 60.181 43.478 0.00 0.00 43.14 1.52
602 603 1.002746 TGCGAATTAGGCAGCACCA 60.003 52.632 0.00 0.00 43.14 4.17
673 675 0.886490 CTTCGTGAGGCTTTGCTGGT 60.886 55.000 0.00 0.00 0.00 4.00
685 687 1.067565 GGAGATGAGTGTGCTTCGTGA 60.068 52.381 0.00 0.00 0.00 4.35
692 694 1.021390 CGGGTTGGAGATGAGTGTGC 61.021 60.000 0.00 0.00 0.00 4.57
738 741 2.231380 GGTGGGTCCAGATGGGTGT 61.231 63.158 0.00 0.00 38.11 4.16
787 791 0.104855 ATCATGCCGTGCTATCGTGT 59.895 50.000 0.00 0.00 0.00 4.49
788 792 1.220529 AATCATGCCGTGCTATCGTG 58.779 50.000 0.00 0.00 0.00 4.35
789 793 2.610479 CCTAATCATGCCGTGCTATCGT 60.610 50.000 0.00 0.00 0.00 3.73
790 794 1.995484 CCTAATCATGCCGTGCTATCG 59.005 52.381 0.00 0.00 0.00 2.92
791 795 3.319137 TCCTAATCATGCCGTGCTATC 57.681 47.619 0.00 0.00 0.00 2.08
792 796 3.769739 TTCCTAATCATGCCGTGCTAT 57.230 42.857 0.00 0.00 0.00 2.97
866 894 2.499827 CCACTAGTAGCCTCCGCCC 61.500 68.421 0.00 0.00 34.57 6.13
896 925 2.456119 GCTGCGATTGGTCAGACCG 61.456 63.158 15.24 3.89 42.58 4.79
1272 1301 3.153676 TCGAATCGAAGCAATCCGTAA 57.846 42.857 1.57 0.00 31.06 3.18
1300 1329 1.512926 GAATCCATCCCGTGATTCCG 58.487 55.000 0.00 0.00 0.00 4.30
1307 1336 1.267121 CTATCCCGAATCCATCCCGT 58.733 55.000 0.00 0.00 0.00 5.28
1310 1339 0.253327 GGGCTATCCCGAATCCATCC 59.747 60.000 0.00 0.00 43.94 3.51
1354 1388 1.995484 ACAGATCGACAACGCATGAAG 59.005 47.619 0.00 0.00 39.58 3.02
1455 1496 1.056103 CGCGCTGCTCTGACATATAC 58.944 55.000 5.56 0.00 0.00 1.47
1574 1657 0.457851 CCGGGAACACTCTAGAGCAG 59.542 60.000 19.97 14.63 0.00 4.24
1592 1676 4.222810 AGTCAACCCAAAATAAGATTGGCC 59.777 41.667 0.00 0.00 44.87 5.36
1598 1687 5.710099 CCTAGCAAGTCAACCCAAAATAAGA 59.290 40.000 0.00 0.00 0.00 2.10
1609 1698 2.623416 ACCAAAAGCCTAGCAAGTCAAC 59.377 45.455 0.00 0.00 0.00 3.18
1779 2063 6.205270 GTCAATCCTTCAAATTTTGCATGGTT 59.795 34.615 4.19 0.00 0.00 3.67
1822 2106 6.254281 CCAACAGGGTTTTAAGAGTATGTG 57.746 41.667 0.00 0.00 0.00 3.21
1849 2143 5.857471 TTAAGCAGGAATGATGAAATGGG 57.143 39.130 0.00 0.00 0.00 4.00
1855 2149 7.123098 ACAAATGACATTAAGCAGGAATGATGA 59.877 33.333 0.00 0.00 37.65 2.92
1856 2150 7.262772 ACAAATGACATTAAGCAGGAATGATG 58.737 34.615 0.00 0.00 37.65 3.07
1857 2151 7.414222 ACAAATGACATTAAGCAGGAATGAT 57.586 32.000 0.00 0.00 37.65 2.45
1993 2289 3.144506 AGCGGCTTTTCAGATCATATGG 58.855 45.455 2.13 0.00 0.00 2.74
2086 2382 0.395311 CTCCCAGGATGTGCAGCATT 60.395 55.000 0.00 0.00 38.06 3.56
2109 2405 2.846206 ACAATCAACCCTAGCCATCAGA 59.154 45.455 0.00 0.00 0.00 3.27
2195 2491 5.567138 TGCCTTTTCAGCTTCTTATTAGC 57.433 39.130 0.00 0.00 38.93 3.09
2209 2508 7.761249 ACAGAACTGCAATAATATTGCCTTTTC 59.239 33.333 28.61 25.00 44.32 2.29
2255 2554 6.832520 AGATGCACATCGATACTTCTCTAT 57.167 37.500 0.00 0.00 42.48 1.98
2289 2588 3.003897 GGCAATAACAAACAGGACAACGA 59.996 43.478 0.00 0.00 0.00 3.85
2290 2589 3.243234 TGGCAATAACAAACAGGACAACG 60.243 43.478 0.00 0.00 0.00 4.10
2325 2625 6.093219 CACATGAGAAGAACCTCCTGTATTTG 59.907 42.308 0.00 0.00 39.09 2.32
2382 2690 9.784531 CAGTATATTATTGGGTTTCTGACAGAT 57.215 33.333 5.87 0.00 0.00 2.90
2656 3074 6.152661 CCTTTCCAGTTGCTTATTTATCCACA 59.847 38.462 0.00 0.00 0.00 4.17
2740 3160 9.869757 ATAGGTGCACAAAATTTTAATAGTTCC 57.130 29.630 20.43 1.70 0.00 3.62
2791 3337 7.990886 CCCAAATACACACACCTATGTACTTAT 59.009 37.037 0.00 0.00 36.72 1.73
3387 3945 7.755582 ACTTCTACAAAATGAACAAAACAGC 57.244 32.000 0.00 0.00 0.00 4.40
3497 4055 7.012327 TCCAACAATTTAGAACTGTCTTGTGAG 59.988 37.037 0.00 0.00 35.12 3.51
3667 4225 5.824904 AATCACCAGTTCAGATTATGTGC 57.175 39.130 0.00 0.00 30.70 4.57
3749 4307 4.614535 GCAAAGTATGGTCTGCTCACAAAG 60.615 45.833 0.00 0.00 0.00 2.77
3882 4440 9.836864 AAAACAAAAATAAGGAGAGCAAATCTT 57.163 25.926 0.00 0.00 38.84 2.40
3894 4452 9.786105 AAATCTGCAACAAAAACAAAAATAAGG 57.214 25.926 0.00 0.00 0.00 2.69
3919 4477 3.314080 CACTTTTACTTCCACGGCAGAAA 59.686 43.478 0.00 0.00 0.00 2.52
4050 4609 4.288626 TGTCCCTACAGCCTACTTTGATTT 59.711 41.667 0.00 0.00 0.00 2.17
4054 4613 3.600388 CTTGTCCCTACAGCCTACTTTG 58.400 50.000 0.00 0.00 36.83 2.77
4111 4671 5.580691 CAGGAAATAGCGTCAAGTTCATGTA 59.419 40.000 0.00 0.00 0.00 2.29
4122 4682 3.738282 CAGCTGATACAGGAAATAGCGTC 59.262 47.826 8.42 0.00 36.36 5.19
4360 4925 4.095782 GGAACTGACACACTACAAGCAAAA 59.904 41.667 0.00 0.00 0.00 2.44
4753 5318 2.596631 CTGGCAGCTGCAACACCT 60.597 61.111 37.63 0.00 44.36 4.00
4922 5488 9.959749 CAAGTAGAACCTAATCACTTCTCTATC 57.040 37.037 0.00 0.00 0.00 2.08
5125 5706 5.185454 CAAGGTGCAAGTTAGGTCATCATA 58.815 41.667 0.00 0.00 0.00 2.15
5156 5737 9.575783 TGGTAAAAACAGAACTACATTTTGAAC 57.424 29.630 0.00 0.00 0.00 3.18
5203 5784 1.131126 GCAACAGTTCATCCATGTCCG 59.869 52.381 0.00 0.00 0.00 4.79
5275 5856 5.011329 ACAGAGTACACCCGATAAAAAGTCA 59.989 40.000 0.00 0.00 0.00 3.41
5282 5863 3.442625 CACAGACAGAGTACACCCGATAA 59.557 47.826 0.00 0.00 0.00 1.75
5289 5870 5.386958 TTGATACCACAGACAGAGTACAC 57.613 43.478 0.00 0.00 0.00 2.90
5302 5883 4.616802 CGACAGCACAAATTTTGATACCAC 59.383 41.667 15.81 3.02 0.00 4.16
5310 5891 2.353269 TGTCGTCGACAGCACAAATTTT 59.647 40.909 23.70 0.00 37.67 1.82
5362 5944 3.921119 TTCCAAATGCTGCTTGTGTAG 57.079 42.857 0.00 0.00 0.00 2.74
5383 5965 0.237235 GTTGCTCGACAATTCGCCAA 59.763 50.000 4.21 0.00 45.46 4.52
5454 6041 7.503521 TTTAGACTTGTGCAATGTACATTCA 57.496 32.000 18.25 15.34 0.00 2.57
5547 6137 1.588404 GTACATTCATGGACACTCGCG 59.412 52.381 0.00 0.00 41.36 5.87
5602 6192 5.105675 TGTGGCTGTACGTATACAATCTTCA 60.106 40.000 0.00 0.00 40.84 3.02
5609 6199 3.506844 TGAGTTGTGGCTGTACGTATACA 59.493 43.478 0.00 0.00 39.06 2.29
5610 6200 3.855950 GTGAGTTGTGGCTGTACGTATAC 59.144 47.826 0.00 0.00 0.00 1.47
5662 6260 3.444742 CAGGTGTGCCATCATGTTAACAT 59.555 43.478 15.47 15.47 37.19 2.71
5705 6303 1.443194 CGTCAAGCAAGCATGGCAC 60.443 57.895 2.77 0.00 37.68 5.01
5712 6310 1.127582 GACATCAGTCGTCAAGCAAGC 59.872 52.381 0.00 0.00 34.60 4.01
5713 6311 1.728971 GGACATCAGTCGTCAAGCAAG 59.271 52.381 0.00 0.00 45.92 4.01
5714 6312 1.069978 TGGACATCAGTCGTCAAGCAA 59.930 47.619 0.00 0.00 45.92 3.91
5715 6313 0.678950 TGGACATCAGTCGTCAAGCA 59.321 50.000 0.00 0.00 45.92 3.91
5716 6314 2.015736 ATGGACATCAGTCGTCAAGC 57.984 50.000 0.00 0.00 45.92 4.01
5724 6322 3.392616 GGGGAACAGATATGGACATCAGT 59.607 47.826 0.00 0.00 0.00 3.41
5858 6456 2.159379 GGAGATGGAAATGGAACGCAAC 60.159 50.000 0.00 0.00 0.00 4.17
5876 6474 5.443185 TGAAGTTTCTTGCTGAAATGGAG 57.557 39.130 8.28 0.00 45.19 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.