Multiple sequence alignment - TraesCS1D01G382700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G382700 chr1D 100.000 2476 0 0 1 2476 457576429 457578904 0.000000e+00 4573
1 TraesCS1D01G382700 chr1D 96.381 1934 62 7 1 1931 471280902 471282830 0.000000e+00 3177
2 TraesCS1D01G382700 chr1D 96.172 1933 65 7 1 1931 395974540 395976465 0.000000e+00 3151
3 TraesCS1D01G382700 chr1D 93.923 181 8 3 1856 2034 189395573 189395752 1.130000e-68 270
4 TraesCS1D01G382700 chr6D 96.646 1938 55 5 1 1931 31859061 31860995 0.000000e+00 3210
5 TraesCS1D01G382700 chr6D 94.318 176 8 2 1856 2029 97920397 97920572 4.060000e-68 268
6 TraesCS1D01G382700 chr5D 96.586 1933 57 7 1 1931 365120437 365118512 0.000000e+00 3195
7 TraesCS1D01G382700 chr5D 95.915 1934 70 7 1 1931 304884321 304882394 0.000000e+00 3125
8 TraesCS1D01G382700 chr5D 94.886 176 7 2 1856 2030 111595354 111595180 8.720000e-70 274
9 TraesCS1D01G382700 chr5D 94.318 176 8 2 1856 2029 304361248 304361423 4.060000e-68 268
10 TraesCS1D01G382700 chr2D 96.480 1932 62 6 1 1930 16904395 16906322 0.000000e+00 3186
11 TraesCS1D01G382700 chr2D 96.430 1933 61 7 1 1931 476878771 476880697 0.000000e+00 3181
12 TraesCS1D01G382700 chr2D 96.174 1934 65 8 1 1931 588796856 588794929 0.000000e+00 3153
13 TraesCS1D01G382700 chr2D 92.512 414 19 5 2027 2439 631885317 631885719 1.280000e-162 582
14 TraesCS1D01G382700 chr3D 96.503 1916 63 4 1 1915 524198505 524200417 0.000000e+00 3164
15 TraesCS1D01G382700 chr3D 94.828 174 7 2 1856 2028 578864882 578865054 1.130000e-68 270
16 TraesCS1D01G382700 chr3D 88.202 178 20 1 2164 2340 603370006 603369829 6.940000e-51 211
17 TraesCS1D01G382700 chr5B 90.456 461 26 3 2027 2476 705120290 705120743 2.120000e-165 592
18 TraesCS1D01G382700 chr5B 90.043 462 27 3 2027 2476 706132131 706132585 4.590000e-162 580
19 TraesCS1D01G382700 chr5B 85.446 213 21 8 2259 2469 459494476 459494272 1.930000e-51 213
20 TraesCS1D01G382700 chr1B 90.043 462 27 3 2027 2476 662184096 662184550 4.590000e-162 580
21 TraesCS1D01G382700 chr3A 87.613 444 43 7 2031 2471 49336517 49336951 2.840000e-139 505
22 TraesCS1D01G382700 chr7A 86.353 447 48 8 2029 2471 477259856 477259419 2.230000e-130 475
23 TraesCS1D01G382700 chr7B 81.573 445 51 12 2029 2467 716730469 716730050 3.050000e-89 339
24 TraesCS1D01G382700 chr3B 95.402 174 7 1 1856 2028 151755499 151755326 2.430000e-70 276
25 TraesCS1D01G382700 chr3B 94.857 175 7 2 1856 2028 817080555 817080729 3.140000e-69 272
26 TraesCS1D01G382700 chr3B 93.056 72 5 0 2215 2286 798179344 798179273 3.370000e-19 106
27 TraesCS1D01G382700 chr7D 94.350 177 6 4 1856 2030 460638092 460637918 4.060000e-68 268
28 TraesCS1D01G382700 chr7D 94.318 176 7 3 1856 2029 550273925 550274099 1.460000e-67 267


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G382700 chr1D 457576429 457578904 2475 False 4573 4573 100.000 1 2476 1 chr1D.!!$F3 2475
1 TraesCS1D01G382700 chr1D 471280902 471282830 1928 False 3177 3177 96.381 1 1931 1 chr1D.!!$F4 1930
2 TraesCS1D01G382700 chr1D 395974540 395976465 1925 False 3151 3151 96.172 1 1931 1 chr1D.!!$F2 1930
3 TraesCS1D01G382700 chr6D 31859061 31860995 1934 False 3210 3210 96.646 1 1931 1 chr6D.!!$F1 1930
4 TraesCS1D01G382700 chr5D 365118512 365120437 1925 True 3195 3195 96.586 1 1931 1 chr5D.!!$R3 1930
5 TraesCS1D01G382700 chr5D 304882394 304884321 1927 True 3125 3125 95.915 1 1931 1 chr5D.!!$R2 1930
6 TraesCS1D01G382700 chr2D 16904395 16906322 1927 False 3186 3186 96.480 1 1930 1 chr2D.!!$F1 1929
7 TraesCS1D01G382700 chr2D 476878771 476880697 1926 False 3181 3181 96.430 1 1931 1 chr2D.!!$F2 1930
8 TraesCS1D01G382700 chr2D 588794929 588796856 1927 True 3153 3153 96.174 1 1931 1 chr2D.!!$R1 1930
9 TraesCS1D01G382700 chr3D 524198505 524200417 1912 False 3164 3164 96.503 1 1915 1 chr3D.!!$F1 1914

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
981 986 1.068083 GCTATGCGCTGCTCTACCA 59.932 57.895 9.73 0.0 35.14 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2289 2311 0.034616 GAGATATGCAAGCGCCTCCT 59.965 55.0 2.29 0.0 37.32 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 154 1.456705 GGCCTCACTCCTCCTCGAT 60.457 63.158 0.00 0.00 0.00 3.59
363 367 3.422303 GCATCAACGTCGCTGCCA 61.422 61.111 0.00 0.00 0.00 4.92
370 374 3.257561 CGTCGCTGCCATCTTCCG 61.258 66.667 0.00 0.00 0.00 4.30
406 411 1.081556 CGACATTGCCGTTCGATCCA 61.082 55.000 0.00 0.00 0.00 3.41
532 537 4.379243 CCGTGGCCGAGAACTGCT 62.379 66.667 0.00 0.00 35.63 4.24
829 834 2.123425 TATCCCTTCGCTCGCCCT 60.123 61.111 0.00 0.00 0.00 5.19
981 986 1.068083 GCTATGCGCTGCTCTACCA 59.932 57.895 9.73 0.00 35.14 3.25
984 989 1.609072 CTATGCGCTGCTCTACCACTA 59.391 52.381 9.73 0.00 0.00 2.74
1047 1052 2.506231 TGTGGCGGAGGGATTGTTAATA 59.494 45.455 0.00 0.00 0.00 0.98
1098 1103 1.305718 GAGAGGCAGGAGGTCTGGT 60.306 63.158 0.00 0.00 43.54 4.00
1247 1258 7.682459 TGCTAATATCTATGGAGGGGTGATTTA 59.318 37.037 0.00 0.00 0.00 1.40
1254 1265 4.028993 TGGAGGGGTGATTTACTTCAAC 57.971 45.455 0.00 0.00 32.32 3.18
1270 1282 5.690865 ACTTCAACAGGTGGAAAACATAGA 58.309 37.500 0.00 0.00 0.00 1.98
1335 1347 9.764363 AAAGTTAGGATTTTTGAACTGATTTCC 57.236 29.630 0.00 0.00 32.57 3.13
1357 1369 4.635324 CCATGCAAATGGGGTTTTATTGTC 59.365 41.667 0.00 0.00 38.04 3.18
1415 1427 4.666655 CGTGTCTGATTAGGAAAGTTTGCG 60.667 45.833 1.08 0.00 0.00 4.85
1784 1801 8.990163 AGGAAAGTTCTGGTTGTAATAAAGAA 57.010 30.769 0.00 0.00 0.00 2.52
1865 1885 3.291809 AAACCCAGCGAAAATAAACCG 57.708 42.857 0.00 0.00 0.00 4.44
1870 1890 2.920640 GCGAAAATAAACCGCGGAC 58.079 52.632 35.90 10.71 39.54 4.79
1871 1891 0.521867 GCGAAAATAAACCGCGGACC 60.522 55.000 35.90 9.71 39.54 4.46
1872 1892 0.797542 CGAAAATAAACCGCGGACCA 59.202 50.000 35.90 16.27 0.00 4.02
1873 1893 1.201987 CGAAAATAAACCGCGGACCAG 60.202 52.381 35.90 4.58 0.00 4.00
1874 1894 1.131693 GAAAATAAACCGCGGACCAGG 59.868 52.381 35.90 3.66 0.00 4.45
1875 1895 0.678684 AAATAAACCGCGGACCAGGG 60.679 55.000 35.90 2.75 0.00 4.45
1876 1896 1.844544 AATAAACCGCGGACCAGGGT 61.845 55.000 35.90 3.57 34.99 4.34
1877 1897 2.530958 ATAAACCGCGGACCAGGGTG 62.531 60.000 35.90 0.93 33.47 4.61
1885 1905 4.677151 GACCAGGGTGGGAGGGGT 62.677 72.222 0.00 0.00 43.37 4.95
1892 1912 4.995058 GTGGGAGGGGTGGTGGGA 62.995 72.222 0.00 0.00 0.00 4.37
1893 1913 4.675303 TGGGAGGGGTGGTGGGAG 62.675 72.222 0.00 0.00 0.00 4.30
1895 1915 4.348495 GGAGGGGTGGTGGGAGGA 62.348 72.222 0.00 0.00 0.00 3.71
1896 1916 2.689034 GAGGGGTGGTGGGAGGAG 60.689 72.222 0.00 0.00 0.00 3.69
1897 1917 3.208592 AGGGGTGGTGGGAGGAGA 61.209 66.667 0.00 0.00 0.00 3.71
1898 1918 2.689034 GGGGTGGTGGGAGGAGAG 60.689 72.222 0.00 0.00 0.00 3.20
1899 1919 2.450243 GGGTGGTGGGAGGAGAGA 59.550 66.667 0.00 0.00 0.00 3.10
1900 1920 1.990614 GGGTGGTGGGAGGAGAGAC 60.991 68.421 0.00 0.00 0.00 3.36
1901 1921 2.352032 GGTGGTGGGAGGAGAGACG 61.352 68.421 0.00 0.00 0.00 4.18
1902 1922 1.304217 GTGGTGGGAGGAGAGACGA 60.304 63.158 0.00 0.00 0.00 4.20
1903 1923 0.898789 GTGGTGGGAGGAGAGACGAA 60.899 60.000 0.00 0.00 0.00 3.85
1904 1924 0.178944 TGGTGGGAGGAGAGACGAAA 60.179 55.000 0.00 0.00 0.00 3.46
1905 1925 0.974383 GGTGGGAGGAGAGACGAAAA 59.026 55.000 0.00 0.00 0.00 2.29
1906 1926 1.346722 GGTGGGAGGAGAGACGAAAAA 59.653 52.381 0.00 0.00 0.00 1.94
1949 1969 4.675303 CAGGGTGGGAGGGGGTGA 62.675 72.222 0.00 0.00 0.00 4.02
1955 1975 3.097162 GGGAGGGGGTGATGGGAC 61.097 72.222 0.00 0.00 0.00 4.46
1993 2015 3.214066 GCGAAAATAAACCGCGGAG 57.786 52.632 35.90 6.46 39.54 4.63
1994 2016 0.722848 GCGAAAATAAACCGCGGAGA 59.277 50.000 35.90 16.89 39.54 3.71
1995 2017 1.528400 GCGAAAATAAACCGCGGAGAC 60.528 52.381 35.90 12.29 39.54 3.36
2009 2031 1.630148 GGAGACGATTCACCAACTCG 58.370 55.000 0.00 0.00 38.34 4.18
2012 2034 3.509388 ACGATTCACCAACTCGTCC 57.491 52.632 0.00 0.00 41.42 4.79
2013 2035 0.677288 ACGATTCACCAACTCGTCCA 59.323 50.000 0.00 0.00 41.42 4.02
2014 2036 1.275291 ACGATTCACCAACTCGTCCAT 59.725 47.619 0.00 0.00 41.42 3.41
2015 2037 2.289444 ACGATTCACCAACTCGTCCATT 60.289 45.455 0.00 0.00 41.42 3.16
2016 2038 3.056393 ACGATTCACCAACTCGTCCATTA 60.056 43.478 0.00 0.00 41.42 1.90
2017 2039 3.551890 CGATTCACCAACTCGTCCATTAG 59.448 47.826 0.00 0.00 0.00 1.73
2018 2040 3.328382 TTCACCAACTCGTCCATTAGG 57.672 47.619 0.00 0.00 0.00 2.69
2019 2041 2.531771 TCACCAACTCGTCCATTAGGA 58.468 47.619 0.00 0.00 43.21 2.94
2020 2042 2.496070 TCACCAACTCGTCCATTAGGAG 59.504 50.000 0.00 0.00 46.92 3.69
2029 2051 6.642707 CTCGTCCATTAGGAGTAGAGATTT 57.357 41.667 0.00 0.00 46.92 2.17
2030 2052 7.045126 CTCGTCCATTAGGAGTAGAGATTTT 57.955 40.000 0.00 0.00 46.92 1.82
2031 2053 6.806751 TCGTCCATTAGGAGTAGAGATTTTG 58.193 40.000 0.00 0.00 46.92 2.44
2032 2054 5.986135 CGTCCATTAGGAGTAGAGATTTTGG 59.014 44.000 0.00 0.00 46.92 3.28
2033 2055 6.407074 CGTCCATTAGGAGTAGAGATTTTGGT 60.407 42.308 0.00 0.00 46.92 3.67
2034 2056 6.987404 GTCCATTAGGAGTAGAGATTTTGGTC 59.013 42.308 0.00 0.00 46.92 4.02
2035 2057 5.986135 CCATTAGGAGTAGAGATTTTGGTCG 59.014 44.000 0.00 0.00 36.89 4.79
2036 2058 5.593679 TTAGGAGTAGAGATTTTGGTCGG 57.406 43.478 0.00 0.00 0.00 4.79
2037 2059 2.766828 AGGAGTAGAGATTTTGGTCGGG 59.233 50.000 0.00 0.00 0.00 5.14
2038 2060 2.552031 GAGTAGAGATTTTGGTCGGGC 58.448 52.381 0.00 0.00 0.00 6.13
2039 2061 1.906574 AGTAGAGATTTTGGTCGGGCA 59.093 47.619 0.00 0.00 0.00 5.36
2040 2062 2.007608 GTAGAGATTTTGGTCGGGCAC 58.992 52.381 0.00 0.00 0.00 5.01
2041 2063 0.400213 AGAGATTTTGGTCGGGCACA 59.600 50.000 0.00 0.00 0.00 4.57
2042 2064 1.004745 AGAGATTTTGGTCGGGCACAT 59.995 47.619 0.00 0.00 0.00 3.21
2043 2065 1.133025 GAGATTTTGGTCGGGCACATG 59.867 52.381 0.00 0.00 0.00 3.21
2044 2066 0.173255 GATTTTGGTCGGGCACATGG 59.827 55.000 0.00 0.00 0.00 3.66
2045 2067 1.257055 ATTTTGGTCGGGCACATGGG 61.257 55.000 0.00 0.00 0.00 4.00
2046 2068 3.877344 TTTGGTCGGGCACATGGGG 62.877 63.158 0.00 0.00 0.00 4.96
2052 2074 3.731728 GGGCACATGGGGCTCTGA 61.732 66.667 22.17 0.00 0.00 3.27
2053 2075 2.599597 GGCACATGGGGCTCTGAT 59.400 61.111 15.48 0.00 0.00 2.90
2054 2076 1.527844 GGCACATGGGGCTCTGATC 60.528 63.158 15.48 0.00 0.00 2.92
2055 2077 1.530771 GCACATGGGGCTCTGATCT 59.469 57.895 0.00 0.00 0.00 2.75
2056 2078 0.761187 GCACATGGGGCTCTGATCTA 59.239 55.000 0.00 0.00 0.00 1.98
2057 2079 1.141657 GCACATGGGGCTCTGATCTAA 59.858 52.381 0.00 0.00 0.00 2.10
2058 2080 2.421952 GCACATGGGGCTCTGATCTAAA 60.422 50.000 0.00 0.00 0.00 1.85
2059 2081 3.209410 CACATGGGGCTCTGATCTAAAC 58.791 50.000 0.00 0.00 0.00 2.01
2060 2082 2.846206 ACATGGGGCTCTGATCTAAACA 59.154 45.455 0.00 0.00 0.00 2.83
2061 2083 3.118112 ACATGGGGCTCTGATCTAAACAG 60.118 47.826 0.00 0.00 36.80 3.16
2062 2084 1.839994 TGGGGCTCTGATCTAAACAGG 59.160 52.381 0.00 0.00 36.22 4.00
2063 2085 1.475930 GGGGCTCTGATCTAAACAGGC 60.476 57.143 0.00 0.00 36.22 4.85
2064 2086 1.475930 GGGCTCTGATCTAAACAGGCC 60.476 57.143 0.00 0.00 43.77 5.19
2065 2087 1.475930 GGCTCTGATCTAAACAGGCCC 60.476 57.143 0.00 0.00 41.37 5.80
2066 2088 1.210478 GCTCTGATCTAAACAGGCCCA 59.790 52.381 0.00 0.00 36.22 5.36
2067 2089 2.158696 GCTCTGATCTAAACAGGCCCAT 60.159 50.000 0.00 0.00 36.22 4.00
2068 2090 3.474600 CTCTGATCTAAACAGGCCCATG 58.525 50.000 0.00 0.00 36.22 3.66
2069 2091 3.114606 TCTGATCTAAACAGGCCCATGA 58.885 45.455 0.00 0.00 36.22 3.07
2070 2092 3.718434 TCTGATCTAAACAGGCCCATGAT 59.282 43.478 0.00 0.00 36.22 2.45
2071 2093 4.907269 TCTGATCTAAACAGGCCCATGATA 59.093 41.667 0.00 0.00 36.22 2.15
2072 2094 5.369404 TCTGATCTAAACAGGCCCATGATAA 59.631 40.000 0.00 0.00 36.22 1.75
2073 2095 6.044754 TCTGATCTAAACAGGCCCATGATAAT 59.955 38.462 0.00 0.00 36.22 1.28
2074 2096 6.240894 TGATCTAAACAGGCCCATGATAATC 58.759 40.000 0.00 0.00 0.00 1.75
2075 2097 5.645056 TCTAAACAGGCCCATGATAATCA 57.355 39.130 0.00 0.00 0.00 2.57
2076 2098 6.012337 TCTAAACAGGCCCATGATAATCAA 57.988 37.500 0.00 0.00 0.00 2.57
2077 2099 6.430864 TCTAAACAGGCCCATGATAATCAAA 58.569 36.000 0.00 0.00 0.00 2.69
2078 2100 5.603170 AAACAGGCCCATGATAATCAAAG 57.397 39.130 0.00 0.00 0.00 2.77
2079 2101 4.524802 ACAGGCCCATGATAATCAAAGA 57.475 40.909 0.00 0.00 0.00 2.52
2080 2102 4.210331 ACAGGCCCATGATAATCAAAGAC 58.790 43.478 0.00 0.00 0.00 3.01
2081 2103 4.079558 ACAGGCCCATGATAATCAAAGACT 60.080 41.667 0.00 0.00 0.00 3.24
2082 2104 5.132648 ACAGGCCCATGATAATCAAAGACTA 59.867 40.000 0.00 0.00 0.00 2.59
2083 2105 5.471456 CAGGCCCATGATAATCAAAGACTAC 59.529 44.000 0.00 0.00 0.00 2.73
2084 2106 4.452455 GGCCCATGATAATCAAAGACTACG 59.548 45.833 0.00 0.00 0.00 3.51
2085 2107 5.057149 GCCCATGATAATCAAAGACTACGT 58.943 41.667 0.00 0.00 0.00 3.57
2086 2108 6.220930 GCCCATGATAATCAAAGACTACGTA 58.779 40.000 0.00 0.00 0.00 3.57
2087 2109 6.366332 GCCCATGATAATCAAAGACTACGTAG 59.634 42.308 20.97 20.97 0.00 3.51
2088 2110 6.366332 CCCATGATAATCAAAGACTACGTAGC 59.634 42.308 22.40 14.61 0.00 3.58
2089 2111 7.148641 CCATGATAATCAAAGACTACGTAGCT 58.851 38.462 22.40 16.55 0.00 3.32
2090 2112 8.297426 CCATGATAATCAAAGACTACGTAGCTA 58.703 37.037 22.40 6.49 0.00 3.32
2091 2113 9.847706 CATGATAATCAAAGACTACGTAGCTAT 57.152 33.333 22.40 2.93 0.00 2.97
2093 2115 9.678941 TGATAATCAAAGACTACGTAGCTATTG 57.321 33.333 22.40 21.12 0.00 1.90
2094 2116 9.894783 GATAATCAAAGACTACGTAGCTATTGA 57.105 33.333 26.20 26.20 0.00 2.57
2096 2118 8.804688 AATCAAAGACTACGTAGCTATTGATC 57.195 34.615 30.14 18.54 35.78 2.92
2097 2119 6.736123 TCAAAGACTACGTAGCTATTGATCC 58.264 40.000 22.40 1.34 0.00 3.36
2098 2120 6.320418 TCAAAGACTACGTAGCTATTGATCCA 59.680 38.462 22.40 6.26 0.00 3.41
2099 2121 6.710597 AAGACTACGTAGCTATTGATCCAA 57.289 37.500 22.40 0.00 0.00 3.53
2100 2122 6.710597 AGACTACGTAGCTATTGATCCAAA 57.289 37.500 22.40 0.00 0.00 3.28
2101 2123 7.108841 AGACTACGTAGCTATTGATCCAAAA 57.891 36.000 22.40 0.00 0.00 2.44
2102 2124 7.727181 AGACTACGTAGCTATTGATCCAAAAT 58.273 34.615 22.40 0.00 0.00 1.82
2103 2125 8.204836 AGACTACGTAGCTATTGATCCAAAATT 58.795 33.333 22.40 0.00 0.00 1.82
2104 2126 8.732746 ACTACGTAGCTATTGATCCAAAATTT 57.267 30.769 22.40 0.00 0.00 1.82
2105 2127 8.612619 ACTACGTAGCTATTGATCCAAAATTTG 58.387 33.333 22.40 0.00 0.00 2.32
2106 2128 7.624360 ACGTAGCTATTGATCCAAAATTTGA 57.376 32.000 7.37 0.00 0.00 2.69
2107 2129 8.225603 ACGTAGCTATTGATCCAAAATTTGAT 57.774 30.769 7.37 0.00 0.00 2.57
2108 2130 8.686334 ACGTAGCTATTGATCCAAAATTTGATT 58.314 29.630 7.37 0.00 0.00 2.57
2109 2131 9.520204 CGTAGCTATTGATCCAAAATTTGATTT 57.480 29.630 7.37 0.00 0.00 2.17
2119 2141 8.937634 ATCCAAAATTTGATTTATGAGACAGC 57.062 30.769 7.37 0.00 0.00 4.40
2120 2142 7.894708 TCCAAAATTTGATTTATGAGACAGCA 58.105 30.769 7.37 0.00 0.00 4.41
2121 2143 8.533657 TCCAAAATTTGATTTATGAGACAGCAT 58.466 29.630 7.37 0.00 0.00 3.79
2122 2144 8.814235 CCAAAATTTGATTTATGAGACAGCATC 58.186 33.333 7.37 0.00 0.00 3.91
2123 2145 9.361315 CAAAATTTGATTTATGAGACAGCATCA 57.639 29.630 0.00 0.00 0.00 3.07
2124 2146 9.932207 AAAATTTGATTTATGAGACAGCATCAA 57.068 25.926 0.00 0.00 0.00 2.57
2125 2147 9.932207 AAATTTGATTTATGAGACAGCATCAAA 57.068 25.926 7.40 7.40 42.08 2.69
2126 2148 9.582431 AATTTGATTTATGAGACAGCATCAAAG 57.418 29.630 10.07 0.00 41.50 2.77
2127 2149 7.926674 TTGATTTATGAGACAGCATCAAAGA 57.073 32.000 0.00 0.00 29.75 2.52
2128 2150 7.312657 TGATTTATGAGACAGCATCAAAGAC 57.687 36.000 0.00 0.00 0.00 3.01
2129 2151 6.317140 TGATTTATGAGACAGCATCAAAGACC 59.683 38.462 0.00 0.00 0.00 3.85
2130 2152 2.084610 TGAGACAGCATCAAAGACCG 57.915 50.000 0.00 0.00 0.00 4.79
2131 2153 1.618343 TGAGACAGCATCAAAGACCGA 59.382 47.619 0.00 0.00 0.00 4.69
2132 2154 1.996191 GAGACAGCATCAAAGACCGAC 59.004 52.381 0.00 0.00 0.00 4.79
2133 2155 1.344438 AGACAGCATCAAAGACCGACA 59.656 47.619 0.00 0.00 0.00 4.35
2134 2156 2.027745 AGACAGCATCAAAGACCGACAT 60.028 45.455 0.00 0.00 0.00 3.06
2135 2157 2.744202 GACAGCATCAAAGACCGACATT 59.256 45.455 0.00 0.00 0.00 2.71
2136 2158 3.149196 ACAGCATCAAAGACCGACATTT 58.851 40.909 0.00 0.00 0.00 2.32
2137 2159 3.569701 ACAGCATCAAAGACCGACATTTT 59.430 39.130 0.00 0.00 0.00 1.82
2138 2160 4.161333 CAGCATCAAAGACCGACATTTTC 58.839 43.478 0.00 0.00 0.00 2.29
2139 2161 4.074970 AGCATCAAAGACCGACATTTTCT 58.925 39.130 0.00 0.00 0.00 2.52
2140 2162 5.122239 CAGCATCAAAGACCGACATTTTCTA 59.878 40.000 0.00 0.00 0.00 2.10
2141 2163 5.352569 AGCATCAAAGACCGACATTTTCTAG 59.647 40.000 0.00 0.00 0.00 2.43
2142 2164 5.563842 CATCAAAGACCGACATTTTCTAGC 58.436 41.667 0.00 0.00 0.00 3.42
2143 2165 4.894784 TCAAAGACCGACATTTTCTAGCT 58.105 39.130 0.00 0.00 0.00 3.32
2144 2166 6.032956 TCAAAGACCGACATTTTCTAGCTA 57.967 37.500 0.00 0.00 0.00 3.32
2145 2167 6.100004 TCAAAGACCGACATTTTCTAGCTAG 58.900 40.000 15.01 15.01 0.00 3.42
2146 2168 5.662674 AAGACCGACATTTTCTAGCTAGT 57.337 39.130 20.10 0.35 0.00 2.57
2147 2169 5.662674 AGACCGACATTTTCTAGCTAGTT 57.337 39.130 20.10 1.99 0.00 2.24
2148 2170 5.411781 AGACCGACATTTTCTAGCTAGTTG 58.588 41.667 20.10 14.95 0.00 3.16
2149 2171 5.047235 AGACCGACATTTTCTAGCTAGTTGT 60.047 40.000 20.10 17.58 0.00 3.32
2150 2172 5.548406 ACCGACATTTTCTAGCTAGTTGTT 58.452 37.500 20.10 2.33 0.00 2.83
2151 2173 5.638234 ACCGACATTTTCTAGCTAGTTGTTC 59.362 40.000 20.10 9.47 0.00 3.18
2152 2174 5.637810 CCGACATTTTCTAGCTAGTTGTTCA 59.362 40.000 20.10 0.00 0.00 3.18
2153 2175 6.313905 CCGACATTTTCTAGCTAGTTGTTCAT 59.686 38.462 20.10 2.61 0.00 2.57
2154 2176 7.491372 CCGACATTTTCTAGCTAGTTGTTCATA 59.509 37.037 20.10 0.00 0.00 2.15
2155 2177 9.035607 CGACATTTTCTAGCTAGTTGTTCATAT 57.964 33.333 20.10 0.00 0.00 1.78
2170 2192 9.136952 AGTTGTTCATATTTGTAGTTCTACGAC 57.863 33.333 0.00 0.00 0.00 4.34
2171 2193 9.136952 GTTGTTCATATTTGTAGTTCTACGACT 57.863 33.333 0.00 1.59 0.00 4.18
2182 2204 5.776519 AGTTCTACGACTACACTTCTACG 57.223 43.478 0.00 0.00 0.00 3.51
2183 2205 5.473931 AGTTCTACGACTACACTTCTACGA 58.526 41.667 0.00 0.00 0.00 3.43
2184 2206 6.105333 AGTTCTACGACTACACTTCTACGAT 58.895 40.000 0.00 0.00 0.00 3.73
2185 2207 6.593382 AGTTCTACGACTACACTTCTACGATT 59.407 38.462 0.00 0.00 0.00 3.34
2186 2208 6.974932 TCTACGACTACACTTCTACGATTT 57.025 37.500 0.00 0.00 0.00 2.17
2187 2209 6.769076 TCTACGACTACACTTCTACGATTTG 58.231 40.000 0.00 0.00 0.00 2.32
2188 2210 5.618056 ACGACTACACTTCTACGATTTGA 57.382 39.130 0.00 0.00 0.00 2.69
2189 2211 6.005583 ACGACTACACTTCTACGATTTGAA 57.994 37.500 0.00 0.00 0.00 2.69
2190 2212 6.441274 ACGACTACACTTCTACGATTTGAAA 58.559 36.000 0.00 0.00 0.00 2.69
2191 2213 6.581542 ACGACTACACTTCTACGATTTGAAAG 59.418 38.462 0.00 0.00 0.00 2.62
2192 2214 6.800408 CGACTACACTTCTACGATTTGAAAGA 59.200 38.462 0.00 0.00 0.00 2.52
2193 2215 7.201249 CGACTACACTTCTACGATTTGAAAGAC 60.201 40.741 0.00 0.00 0.00 3.01
2194 2216 5.824243 ACACTTCTACGATTTGAAAGACG 57.176 39.130 0.00 5.93 0.00 4.18
2195 2217 4.150098 ACACTTCTACGATTTGAAAGACGC 59.850 41.667 7.08 0.00 0.00 5.19
2196 2218 3.364023 ACTTCTACGATTTGAAAGACGCG 59.636 43.478 3.53 3.53 0.00 6.01
2197 2219 3.206034 TCTACGATTTGAAAGACGCGA 57.794 42.857 15.93 0.00 0.00 5.87
2198 2220 3.567530 TCTACGATTTGAAAGACGCGAA 58.432 40.909 15.93 0.00 0.00 4.70
2199 2221 2.572173 ACGATTTGAAAGACGCGAAC 57.428 45.000 15.93 6.52 0.00 3.95
2201 2223 1.123576 CGATTTGAAAGACGCGAACGA 59.876 47.619 15.93 0.00 43.93 3.85
2202 2224 2.409244 CGATTTGAAAGACGCGAACGAA 60.409 45.455 15.93 5.56 43.93 3.85
2203 2225 3.720920 CGATTTGAAAGACGCGAACGAAT 60.721 43.478 15.93 10.12 43.93 3.34
2204 2226 3.595709 TTTGAAAGACGCGAACGAATT 57.404 38.095 15.93 4.95 43.93 2.17
2205 2227 3.595709 TTGAAAGACGCGAACGAATTT 57.404 38.095 15.93 3.84 43.93 1.82
2206 2228 2.898746 TGAAAGACGCGAACGAATTTG 58.101 42.857 15.93 0.00 43.93 2.32
2207 2229 2.540516 TGAAAGACGCGAACGAATTTGA 59.459 40.909 15.93 0.00 43.93 2.69
2208 2230 3.185594 TGAAAGACGCGAACGAATTTGAT 59.814 39.130 15.93 0.00 43.93 2.57
2209 2231 2.787723 AGACGCGAACGAATTTGATG 57.212 45.000 15.93 0.00 43.93 3.07
2210 2232 2.333926 AGACGCGAACGAATTTGATGA 58.666 42.857 15.93 0.00 43.93 2.92
2211 2233 2.930040 AGACGCGAACGAATTTGATGAT 59.070 40.909 15.93 0.00 43.93 2.45
2212 2234 4.109766 AGACGCGAACGAATTTGATGATA 58.890 39.130 15.93 0.00 43.93 2.15
2213 2235 4.565166 AGACGCGAACGAATTTGATGATAA 59.435 37.500 15.93 0.00 43.93 1.75
2214 2236 5.062934 AGACGCGAACGAATTTGATGATAAA 59.937 36.000 15.93 0.00 43.93 1.40
2215 2237 5.623335 ACGCGAACGAATTTGATGATAAAA 58.377 33.333 15.93 0.00 43.93 1.52
2216 2238 6.081049 ACGCGAACGAATTTGATGATAAAAA 58.919 32.000 15.93 0.00 43.93 1.94
2217 2239 6.745450 ACGCGAACGAATTTGATGATAAAAAT 59.255 30.769 15.93 0.00 43.93 1.82
2218 2240 7.906010 ACGCGAACGAATTTGATGATAAAAATA 59.094 29.630 15.93 0.00 43.93 1.40
2219 2241 8.729528 CGCGAACGAATTTGATGATAAAAATAA 58.270 29.630 0.00 0.00 43.93 1.40
2240 2262 8.864260 AATAAACTAACCGTTTTTATCGTTCG 57.136 30.769 0.00 0.00 43.06 3.95
2241 2263 4.908966 ACTAACCGTTTTTATCGTTCGG 57.091 40.909 0.00 0.00 45.53 4.30
2245 2267 3.791993 CCGTTTTTATCGTTCGGTCAA 57.208 42.857 0.00 0.00 36.99 3.18
2246 2268 3.728600 CCGTTTTTATCGTTCGGTCAAG 58.271 45.455 0.00 0.00 36.99 3.02
2247 2269 3.150731 CGTTTTTATCGTTCGGTCAAGC 58.849 45.455 0.00 0.00 0.00 4.01
2248 2270 3.120786 CGTTTTTATCGTTCGGTCAAGCT 60.121 43.478 0.00 0.00 0.00 3.74
2249 2271 4.392216 GTTTTTATCGTTCGGTCAAGCTC 58.608 43.478 0.00 0.00 0.00 4.09
2250 2272 3.306917 TTTATCGTTCGGTCAAGCTCA 57.693 42.857 0.00 0.00 0.00 4.26
2251 2273 3.520290 TTATCGTTCGGTCAAGCTCAT 57.480 42.857 0.00 0.00 0.00 2.90
2252 2274 1.927895 ATCGTTCGGTCAAGCTCATC 58.072 50.000 0.00 0.00 0.00 2.92
2253 2275 0.108804 TCGTTCGGTCAAGCTCATCC 60.109 55.000 0.00 0.00 0.00 3.51
2254 2276 1.413767 CGTTCGGTCAAGCTCATCCG 61.414 60.000 14.46 14.46 43.65 4.18
2255 2277 0.389948 GTTCGGTCAAGCTCATCCGT 60.390 55.000 18.16 0.00 42.95 4.69
2256 2278 0.389817 TTCGGTCAAGCTCATCCGTG 60.390 55.000 18.16 0.00 42.95 4.94
2257 2279 1.079819 CGGTCAAGCTCATCCGTGT 60.080 57.895 13.00 0.00 38.45 4.49
2258 2280 1.354337 CGGTCAAGCTCATCCGTGTG 61.354 60.000 13.00 0.00 38.45 3.82
2259 2281 1.021390 GGTCAAGCTCATCCGTGTGG 61.021 60.000 0.00 0.00 0.00 4.17
2260 2282 1.375908 TCAAGCTCATCCGTGTGGC 60.376 57.895 0.00 0.00 34.14 5.01
2261 2283 2.045926 AAGCTCATCCGTGTGGCC 60.046 61.111 0.00 0.00 34.14 5.36
2262 2284 3.958147 AAGCTCATCCGTGTGGCCG 62.958 63.158 0.00 0.00 34.14 6.13
2282 2304 2.125310 CGGCCAGAATGCACCGTA 60.125 61.111 2.24 0.00 45.55 4.02
2283 2305 2.173669 CGGCCAGAATGCACCGTAG 61.174 63.158 2.24 0.00 45.55 3.51
2284 2306 1.220749 GGCCAGAATGCACCGTAGA 59.779 57.895 0.00 0.00 31.97 2.59
2285 2307 0.179045 GGCCAGAATGCACCGTAGAT 60.179 55.000 0.00 0.00 31.97 1.98
2286 2308 1.070134 GGCCAGAATGCACCGTAGATA 59.930 52.381 0.00 0.00 31.97 1.98
2287 2309 2.484770 GGCCAGAATGCACCGTAGATAA 60.485 50.000 0.00 0.00 31.97 1.75
2288 2310 2.544267 GCCAGAATGCACCGTAGATAAC 59.456 50.000 0.00 0.00 31.97 1.89
2289 2311 3.792401 CCAGAATGCACCGTAGATAACA 58.208 45.455 0.00 0.00 31.97 2.41
2290 2312 3.804325 CCAGAATGCACCGTAGATAACAG 59.196 47.826 0.00 0.00 31.97 3.16
2291 2313 3.804325 CAGAATGCACCGTAGATAACAGG 59.196 47.826 0.00 0.00 0.00 4.00
2292 2314 3.704566 AGAATGCACCGTAGATAACAGGA 59.295 43.478 0.00 0.00 0.00 3.86
2293 2315 3.735237 ATGCACCGTAGATAACAGGAG 57.265 47.619 0.00 0.00 0.00 3.69
2294 2316 1.754803 TGCACCGTAGATAACAGGAGG 59.245 52.381 0.00 0.00 0.00 4.30
2295 2317 1.538419 GCACCGTAGATAACAGGAGGC 60.538 57.143 0.00 0.00 0.00 4.70
2296 2318 1.030457 ACCGTAGATAACAGGAGGCG 58.970 55.000 0.00 0.00 0.00 5.52
2297 2319 0.318784 CCGTAGATAACAGGAGGCGC 60.319 60.000 0.00 0.00 0.00 6.53
2298 2320 0.669077 CGTAGATAACAGGAGGCGCT 59.331 55.000 7.64 0.00 0.00 5.92
2299 2321 1.067212 CGTAGATAACAGGAGGCGCTT 59.933 52.381 7.64 0.00 0.00 4.68
2300 2322 2.474816 GTAGATAACAGGAGGCGCTTG 58.525 52.381 7.64 0.00 0.00 4.01
2301 2323 0.462759 AGATAACAGGAGGCGCTTGC 60.463 55.000 7.64 4.64 38.11 4.01
2302 2324 0.744414 GATAACAGGAGGCGCTTGCA 60.744 55.000 14.54 0.00 41.71 4.08
2303 2325 0.107017 ATAACAGGAGGCGCTTGCAT 60.107 50.000 14.54 1.46 41.71 3.96
2304 2326 0.539518 TAACAGGAGGCGCTTGCATA 59.460 50.000 14.54 0.44 41.71 3.14
2305 2327 0.107017 AACAGGAGGCGCTTGCATAT 60.107 50.000 14.54 0.00 41.71 1.78
2306 2328 0.533755 ACAGGAGGCGCTTGCATATC 60.534 55.000 14.54 0.00 41.71 1.63
2307 2329 0.250209 CAGGAGGCGCTTGCATATCT 60.250 55.000 14.54 0.00 41.71 1.98
2308 2330 0.034616 AGGAGGCGCTTGCATATCTC 59.965 55.000 14.54 5.64 41.71 2.75
2309 2331 0.952984 GGAGGCGCTTGCATATCTCC 60.953 60.000 7.64 8.43 41.71 3.71
2310 2332 0.034616 GAGGCGCTTGCATATCTCCT 59.965 55.000 7.64 0.00 41.71 3.69
2311 2333 0.471617 AGGCGCTTGCATATCTCCTT 59.528 50.000 7.64 0.00 41.71 3.36
2312 2334 0.871057 GGCGCTTGCATATCTCCTTC 59.129 55.000 7.64 0.00 41.71 3.46
2313 2335 0.871057 GCGCTTGCATATCTCCTTCC 59.129 55.000 0.00 0.00 38.92 3.46
2314 2336 1.517242 CGCTTGCATATCTCCTTCCC 58.483 55.000 0.00 0.00 0.00 3.97
2315 2337 1.071385 CGCTTGCATATCTCCTTCCCT 59.929 52.381 0.00 0.00 0.00 4.20
2316 2338 2.486191 CGCTTGCATATCTCCTTCCCTT 60.486 50.000 0.00 0.00 0.00 3.95
2317 2339 3.145286 GCTTGCATATCTCCTTCCCTTC 58.855 50.000 0.00 0.00 0.00 3.46
2318 2340 3.181446 GCTTGCATATCTCCTTCCCTTCT 60.181 47.826 0.00 0.00 0.00 2.85
2319 2341 4.640364 CTTGCATATCTCCTTCCCTTCTC 58.360 47.826 0.00 0.00 0.00 2.87
2320 2342 2.975489 TGCATATCTCCTTCCCTTCTCC 59.025 50.000 0.00 0.00 0.00 3.71
2321 2343 2.975489 GCATATCTCCTTCCCTTCTCCA 59.025 50.000 0.00 0.00 0.00 3.86
2322 2344 3.244387 GCATATCTCCTTCCCTTCTCCAC 60.244 52.174 0.00 0.00 0.00 4.02
2323 2345 2.959421 ATCTCCTTCCCTTCTCCACT 57.041 50.000 0.00 0.00 0.00 4.00
2324 2346 1.944177 TCTCCTTCCCTTCTCCACTG 58.056 55.000 0.00 0.00 0.00 3.66
2325 2347 0.251634 CTCCTTCCCTTCTCCACTGC 59.748 60.000 0.00 0.00 0.00 4.40
2326 2348 1.201429 TCCTTCCCTTCTCCACTGCC 61.201 60.000 0.00 0.00 0.00 4.85
2327 2349 1.492133 CCTTCCCTTCTCCACTGCCA 61.492 60.000 0.00 0.00 0.00 4.92
2328 2350 0.035630 CTTCCCTTCTCCACTGCCAG 60.036 60.000 0.00 0.00 0.00 4.85
2329 2351 0.473694 TTCCCTTCTCCACTGCCAGA 60.474 55.000 0.00 0.00 0.00 3.86
2330 2352 0.252881 TCCCTTCTCCACTGCCAGAT 60.253 55.000 0.00 0.00 0.00 2.90
2331 2353 0.622665 CCCTTCTCCACTGCCAGATT 59.377 55.000 0.00 0.00 0.00 2.40
2332 2354 1.407989 CCCTTCTCCACTGCCAGATTC 60.408 57.143 0.00 0.00 0.00 2.52
2333 2355 1.649664 CTTCTCCACTGCCAGATTCG 58.350 55.000 0.00 0.00 0.00 3.34
2334 2356 1.205655 CTTCTCCACTGCCAGATTCGA 59.794 52.381 0.00 0.00 0.00 3.71
2335 2357 1.489481 TCTCCACTGCCAGATTCGAT 58.511 50.000 0.00 0.00 0.00 3.59
2336 2358 2.666317 TCTCCACTGCCAGATTCGATA 58.334 47.619 0.00 0.00 0.00 2.92
2337 2359 2.625314 TCTCCACTGCCAGATTCGATAG 59.375 50.000 0.00 0.00 0.00 2.08
2351 2373 2.077627 TCGATAGACGATCTAGCAGGC 58.922 52.381 9.73 0.00 46.45 4.85
2352 2374 1.201976 CGATAGACGATCTAGCAGGCG 60.202 57.143 9.73 0.00 45.77 5.52
2353 2375 1.131504 GATAGACGATCTAGCAGGCGG 59.868 57.143 0.00 0.00 35.58 6.13
2354 2376 0.179026 TAGACGATCTAGCAGGCGGT 60.179 55.000 0.00 0.00 0.00 5.68
2355 2377 1.008309 GACGATCTAGCAGGCGGTC 60.008 63.158 0.00 0.00 0.00 4.79
2356 2378 1.448922 GACGATCTAGCAGGCGGTCT 61.449 60.000 0.00 0.00 0.00 3.85
2357 2379 1.007964 CGATCTAGCAGGCGGTCTG 60.008 63.158 4.96 4.96 46.03 3.51
2389 2411 3.777925 CGGCAACCTCGAACGCAG 61.778 66.667 0.00 0.00 0.00 5.18
2390 2412 3.423154 GGCAACCTCGAACGCAGG 61.423 66.667 9.72 9.72 37.03 4.85
2391 2413 2.357034 GCAACCTCGAACGCAGGA 60.357 61.111 15.37 0.00 34.75 3.86
2392 2414 2.383527 GCAACCTCGAACGCAGGAG 61.384 63.158 15.37 10.24 34.75 3.69
2393 2415 2.048127 AACCTCGAACGCAGGAGC 60.048 61.111 15.37 0.00 34.75 4.70
2394 2416 2.867855 AACCTCGAACGCAGGAGCA 61.868 57.895 15.37 0.00 42.27 4.26
2395 2417 2.507992 CCTCGAACGCAGGAGCAG 60.508 66.667 6.80 0.00 42.27 4.24
2396 2418 2.568612 CTCGAACGCAGGAGCAGA 59.431 61.111 0.00 0.00 42.27 4.26
2397 2419 1.140589 CTCGAACGCAGGAGCAGAT 59.859 57.895 0.00 0.00 42.27 2.90
2398 2420 0.459237 CTCGAACGCAGGAGCAGATT 60.459 55.000 0.00 0.00 42.27 2.40
2399 2421 0.737367 TCGAACGCAGGAGCAGATTG 60.737 55.000 0.00 0.00 42.27 2.67
2400 2422 1.699656 CGAACGCAGGAGCAGATTGG 61.700 60.000 0.00 0.00 42.27 3.16
2401 2423 0.391661 GAACGCAGGAGCAGATTGGA 60.392 55.000 0.00 0.00 42.27 3.53
2402 2424 0.036732 AACGCAGGAGCAGATTGGAA 59.963 50.000 0.00 0.00 42.27 3.53
2403 2425 0.036732 ACGCAGGAGCAGATTGGAAA 59.963 50.000 0.00 0.00 42.27 3.13
2404 2426 0.449388 CGCAGGAGCAGATTGGAAAC 59.551 55.000 0.00 0.00 42.27 2.78
2405 2427 0.449388 GCAGGAGCAGATTGGAAACG 59.551 55.000 0.00 0.00 41.58 3.60
2406 2428 1.945819 GCAGGAGCAGATTGGAAACGA 60.946 52.381 0.00 0.00 41.58 3.85
2407 2429 2.426522 CAGGAGCAGATTGGAAACGAA 58.573 47.619 0.00 0.00 0.00 3.85
2408 2430 2.417933 CAGGAGCAGATTGGAAACGAAG 59.582 50.000 0.00 0.00 0.00 3.79
2409 2431 1.131315 GGAGCAGATTGGAAACGAAGC 59.869 52.381 0.00 0.00 0.00 3.86
2410 2432 0.798776 AGCAGATTGGAAACGAAGCG 59.201 50.000 0.00 0.00 0.00 4.68
2411 2433 0.796312 GCAGATTGGAAACGAAGCGA 59.204 50.000 0.00 0.00 0.00 4.93
2412 2434 1.398390 GCAGATTGGAAACGAAGCGAT 59.602 47.619 0.00 0.00 0.00 4.58
2413 2435 2.159517 GCAGATTGGAAACGAAGCGATT 60.160 45.455 0.00 0.00 0.00 3.34
2414 2436 3.063452 GCAGATTGGAAACGAAGCGATTA 59.937 43.478 0.00 0.00 0.00 1.75
2415 2437 4.783450 GCAGATTGGAAACGAAGCGATTAG 60.783 45.833 0.00 0.00 0.00 1.73
2416 2438 4.566759 CAGATTGGAAACGAAGCGATTAGA 59.433 41.667 0.00 0.00 0.00 2.10
2417 2439 5.235186 CAGATTGGAAACGAAGCGATTAGAT 59.765 40.000 0.00 0.00 0.00 1.98
2418 2440 4.857871 TTGGAAACGAAGCGATTAGATG 57.142 40.909 0.00 0.00 0.00 2.90
2419 2441 3.194861 TGGAAACGAAGCGATTAGATGG 58.805 45.455 0.00 0.00 0.00 3.51
2420 2442 2.544267 GGAAACGAAGCGATTAGATGGG 59.456 50.000 0.00 0.00 0.00 4.00
2421 2443 3.454375 GAAACGAAGCGATTAGATGGGA 58.546 45.455 0.00 0.00 0.00 4.37
2422 2444 3.753294 AACGAAGCGATTAGATGGGAT 57.247 42.857 0.00 0.00 0.00 3.85
2423 2445 3.305398 ACGAAGCGATTAGATGGGATC 57.695 47.619 0.00 0.00 0.00 3.36
2424 2446 2.894126 ACGAAGCGATTAGATGGGATCT 59.106 45.455 0.00 0.00 43.33 2.75
2425 2447 3.322254 ACGAAGCGATTAGATGGGATCTT 59.678 43.478 0.00 0.00 40.76 2.40
2426 2448 4.202264 ACGAAGCGATTAGATGGGATCTTT 60.202 41.667 0.00 0.00 40.76 2.52
2427 2449 4.752101 CGAAGCGATTAGATGGGATCTTTT 59.248 41.667 0.00 0.00 40.76 2.27
2428 2450 5.237344 CGAAGCGATTAGATGGGATCTTTTT 59.763 40.000 0.00 0.00 40.76 1.94
2453 2475 8.846423 TTTTAAGAGGTGATTAGAGGAGATCT 57.154 34.615 0.00 0.00 42.47 2.75
2454 2476 9.937876 TTTTAAGAGGTGATTAGAGGAGATCTA 57.062 33.333 0.00 0.00 39.64 1.98
2463 2485 3.396685 AGAGGAGATCTAACTGTGCCT 57.603 47.619 0.00 0.00 36.10 4.75
2464 2486 4.528076 AGAGGAGATCTAACTGTGCCTA 57.472 45.455 0.00 0.00 36.10 3.93
2465 2487 4.211920 AGAGGAGATCTAACTGTGCCTAC 58.788 47.826 0.00 0.00 36.10 3.18
2466 2488 2.952978 AGGAGATCTAACTGTGCCTACG 59.047 50.000 0.00 0.00 0.00 3.51
2467 2489 2.034812 GGAGATCTAACTGTGCCTACGG 59.965 54.545 0.00 0.00 39.18 4.02
2468 2490 2.032620 AGATCTAACTGTGCCTACGGG 58.967 52.381 0.00 0.00 37.51 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 4.080863 CCCTTATCCATTCCCCTTCGATAG 60.081 50.000 0.00 0.00 0.00 2.08
86 87 3.844211 CCCTTATCCATTCCCCTTCGATA 59.156 47.826 0.00 0.00 0.00 2.92
153 154 2.536633 TGGATTTGGGAGGGGGCA 60.537 61.111 0.00 0.00 0.00 5.36
363 367 1.678970 GCCCAAGGTTGCGGAAGAT 60.679 57.895 0.00 0.00 0.00 2.40
600 605 2.516930 GGCATGGGCGTGCATAGT 60.517 61.111 14.18 0.00 46.81 2.12
749 754 4.248842 CGGCCAGGGTGTGTGTCA 62.249 66.667 2.24 0.00 0.00 3.58
1047 1052 1.956159 GCCACCTCCTTCTCGTACTCT 60.956 57.143 0.00 0.00 0.00 3.24
1098 1103 2.591429 CAGCAAGGTGACACCGCA 60.591 61.111 21.88 0.00 44.90 5.69
1111 1116 0.840617 TAAACACCTCCACCACAGCA 59.159 50.000 0.00 0.00 0.00 4.41
1189 1199 4.227197 ACTGAGATCTCCGGGTTATGATT 58.773 43.478 20.03 0.00 0.00 2.57
1190 1200 3.850752 ACTGAGATCTCCGGGTTATGAT 58.149 45.455 20.03 0.00 0.00 2.45
1231 1242 5.251932 TGTTGAAGTAAATCACCCCTCCATA 59.748 40.000 0.00 0.00 0.00 2.74
1247 1258 5.690865 TCTATGTTTTCCACCTGTTGAAGT 58.309 37.500 0.00 0.00 0.00 3.01
1254 1265 8.531146 ACCAATATTTTCTATGTTTTCCACCTG 58.469 33.333 0.00 0.00 0.00 4.00
1270 1282 9.942850 CCTTTCCTTGATAACAACCAATATTTT 57.057 29.630 0.00 0.00 32.27 1.82
1335 1347 5.352016 CAGACAATAAAACCCCATTTGCATG 59.648 40.000 0.00 0.00 0.00 4.06
1357 1369 5.769484 AGGTACTGATATCACGTTACCAG 57.231 43.478 23.42 8.67 37.18 4.00
1784 1801 6.318900 GGTCATCGGTTTATTTTTCTCTCCAT 59.681 38.462 0.00 0.00 0.00 3.41
1868 1888 4.677151 ACCCCTCCCACCCTGGTC 62.677 72.222 0.00 0.00 35.17 4.02
1875 1895 4.995058 TCCCACCACCCCTCCCAC 62.995 72.222 0.00 0.00 0.00 4.61
1876 1896 4.675303 CTCCCACCACCCCTCCCA 62.675 72.222 0.00 0.00 0.00 4.37
1878 1898 4.348495 TCCTCCCACCACCCCTCC 62.348 72.222 0.00 0.00 0.00 4.30
1879 1899 2.689034 CTCCTCCCACCACCCCTC 60.689 72.222 0.00 0.00 0.00 4.30
1880 1900 3.208592 TCTCCTCCCACCACCCCT 61.209 66.667 0.00 0.00 0.00 4.79
1881 1901 2.689034 CTCTCCTCCCACCACCCC 60.689 72.222 0.00 0.00 0.00 4.95
1882 1902 1.990614 GTCTCTCCTCCCACCACCC 60.991 68.421 0.00 0.00 0.00 4.61
1883 1903 2.352032 CGTCTCTCCTCCCACCACC 61.352 68.421 0.00 0.00 0.00 4.61
1884 1904 0.898789 TTCGTCTCTCCTCCCACCAC 60.899 60.000 0.00 0.00 0.00 4.16
1885 1905 0.178944 TTTCGTCTCTCCTCCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
1886 1906 0.974383 TTTTCGTCTCTCCTCCCACC 59.026 55.000 0.00 0.00 0.00 4.61
1887 1907 2.833631 TTTTTCGTCTCTCCTCCCAC 57.166 50.000 0.00 0.00 0.00 4.61
1904 1924 4.052608 CGGTTTATTTTCGCTGGGTTTTT 58.947 39.130 0.00 0.00 0.00 1.94
1905 1925 3.644823 CGGTTTATTTTCGCTGGGTTTT 58.355 40.909 0.00 0.00 0.00 2.43
1906 1926 2.608506 GCGGTTTATTTTCGCTGGGTTT 60.609 45.455 0.00 0.00 45.16 3.27
1907 1927 1.068125 GCGGTTTATTTTCGCTGGGTT 60.068 47.619 0.00 0.00 45.16 4.11
1908 1928 0.524414 GCGGTTTATTTTCGCTGGGT 59.476 50.000 0.00 0.00 45.16 4.51
1909 1929 0.522495 CGCGGTTTATTTTCGCTGGG 60.522 55.000 0.00 0.00 46.23 4.45
1910 1930 0.522495 CCGCGGTTTATTTTCGCTGG 60.522 55.000 19.50 0.00 46.23 4.85
1911 1931 0.444651 TCCGCGGTTTATTTTCGCTG 59.555 50.000 27.15 0.00 46.23 5.18
1912 1932 0.445043 GTCCGCGGTTTATTTTCGCT 59.555 50.000 27.15 0.00 46.23 4.93
1913 1933 0.521867 GGTCCGCGGTTTATTTTCGC 60.522 55.000 27.15 0.00 45.15 4.70
1914 1934 0.797542 TGGTCCGCGGTTTATTTTCG 59.202 50.000 27.15 0.00 0.00 3.46
1915 1935 1.131693 CCTGGTCCGCGGTTTATTTTC 59.868 52.381 27.15 7.36 0.00 2.29
1916 1936 1.170442 CCTGGTCCGCGGTTTATTTT 58.830 50.000 27.15 0.00 0.00 1.82
1917 1937 0.678684 CCCTGGTCCGCGGTTTATTT 60.679 55.000 27.15 0.00 0.00 1.40
1918 1938 1.078001 CCCTGGTCCGCGGTTTATT 60.078 57.895 27.15 0.00 0.00 1.40
1919 1939 2.295602 ACCCTGGTCCGCGGTTTAT 61.296 57.895 27.15 2.42 0.00 1.40
1920 1940 2.924101 ACCCTGGTCCGCGGTTTA 60.924 61.111 27.15 11.33 0.00 2.01
1921 1941 4.636435 CACCCTGGTCCGCGGTTT 62.636 66.667 27.15 0.00 0.00 3.27
1972 1993 0.444651 CCGCGGTTTATTTTCGCTGA 59.555 50.000 19.50 0.00 46.23 4.26
1995 2017 2.010145 ATGGACGAGTTGGTGAATCG 57.990 50.000 0.00 0.00 42.04 3.34
1996 2018 3.871594 CCTAATGGACGAGTTGGTGAATC 59.128 47.826 0.00 0.00 34.57 2.52
1997 2019 3.517901 TCCTAATGGACGAGTTGGTGAAT 59.482 43.478 0.00 0.00 37.46 2.57
1998 2020 2.901192 TCCTAATGGACGAGTTGGTGAA 59.099 45.455 0.00 0.00 37.46 3.18
1999 2021 2.496070 CTCCTAATGGACGAGTTGGTGA 59.504 50.000 0.00 0.00 37.46 4.02
2000 2022 2.233922 ACTCCTAATGGACGAGTTGGTG 59.766 50.000 0.00 0.00 37.46 4.17
2001 2023 2.537143 ACTCCTAATGGACGAGTTGGT 58.463 47.619 0.00 0.00 37.46 3.67
2002 2024 3.952323 TCTACTCCTAATGGACGAGTTGG 59.048 47.826 0.00 0.00 37.93 3.77
2003 2025 4.882427 TCTCTACTCCTAATGGACGAGTTG 59.118 45.833 0.00 0.00 37.93 3.16
2004 2026 5.113446 TCTCTACTCCTAATGGACGAGTT 57.887 43.478 0.00 0.00 37.93 3.01
2005 2027 4.774660 TCTCTACTCCTAATGGACGAGT 57.225 45.455 0.00 0.00 40.00 4.18
2006 2028 6.642707 AAATCTCTACTCCTAATGGACGAG 57.357 41.667 0.00 0.00 37.46 4.18
2007 2029 6.183360 CCAAAATCTCTACTCCTAATGGACGA 60.183 42.308 0.00 0.00 37.46 4.20
2008 2030 5.986135 CCAAAATCTCTACTCCTAATGGACG 59.014 44.000 0.00 0.00 37.46 4.79
2009 2031 6.890293 ACCAAAATCTCTACTCCTAATGGAC 58.110 40.000 0.00 0.00 37.46 4.02
2010 2032 6.183360 CGACCAAAATCTCTACTCCTAATGGA 60.183 42.308 0.00 0.00 40.69 3.41
2011 2033 5.986135 CGACCAAAATCTCTACTCCTAATGG 59.014 44.000 0.00 0.00 0.00 3.16
2012 2034 5.986135 CCGACCAAAATCTCTACTCCTAATG 59.014 44.000 0.00 0.00 0.00 1.90
2013 2035 5.070580 CCCGACCAAAATCTCTACTCCTAAT 59.929 44.000 0.00 0.00 0.00 1.73
2014 2036 4.404715 CCCGACCAAAATCTCTACTCCTAA 59.595 45.833 0.00 0.00 0.00 2.69
2015 2037 3.958798 CCCGACCAAAATCTCTACTCCTA 59.041 47.826 0.00 0.00 0.00 2.94
2016 2038 2.766828 CCCGACCAAAATCTCTACTCCT 59.233 50.000 0.00 0.00 0.00 3.69
2017 2039 2.742204 GCCCGACCAAAATCTCTACTCC 60.742 54.545 0.00 0.00 0.00 3.85
2018 2040 2.093658 TGCCCGACCAAAATCTCTACTC 60.094 50.000 0.00 0.00 0.00 2.59
2019 2041 1.906574 TGCCCGACCAAAATCTCTACT 59.093 47.619 0.00 0.00 0.00 2.57
2020 2042 2.007608 GTGCCCGACCAAAATCTCTAC 58.992 52.381 0.00 0.00 0.00 2.59
2021 2043 1.626321 TGTGCCCGACCAAAATCTCTA 59.374 47.619 0.00 0.00 0.00 2.43
2022 2044 0.400213 TGTGCCCGACCAAAATCTCT 59.600 50.000 0.00 0.00 0.00 3.10
2023 2045 1.133025 CATGTGCCCGACCAAAATCTC 59.867 52.381 0.00 0.00 0.00 2.75
2024 2046 1.176527 CATGTGCCCGACCAAAATCT 58.823 50.000 0.00 0.00 0.00 2.40
2025 2047 0.173255 CCATGTGCCCGACCAAAATC 59.827 55.000 0.00 0.00 0.00 2.17
2026 2048 1.257055 CCCATGTGCCCGACCAAAAT 61.257 55.000 0.00 0.00 0.00 1.82
2027 2049 1.905843 CCCATGTGCCCGACCAAAA 60.906 57.895 0.00 0.00 0.00 2.44
2028 2050 2.282816 CCCATGTGCCCGACCAAA 60.283 61.111 0.00 0.00 0.00 3.28
2029 2051 4.358841 CCCCATGTGCCCGACCAA 62.359 66.667 0.00 0.00 0.00 3.67
2035 2057 2.972892 GATCAGAGCCCCATGTGCCC 62.973 65.000 1.17 0.00 0.00 5.36
2036 2058 1.527844 GATCAGAGCCCCATGTGCC 60.528 63.158 1.17 0.00 0.00 5.01
2037 2059 0.761187 TAGATCAGAGCCCCATGTGC 59.239 55.000 0.00 0.00 0.00 4.57
2038 2060 3.209410 GTTTAGATCAGAGCCCCATGTG 58.791 50.000 0.00 0.00 0.00 3.21
2039 2061 2.846206 TGTTTAGATCAGAGCCCCATGT 59.154 45.455 0.00 0.00 0.00 3.21
2040 2062 3.474600 CTGTTTAGATCAGAGCCCCATG 58.525 50.000 0.00 0.00 35.20 3.66
2041 2063 2.441001 CCTGTTTAGATCAGAGCCCCAT 59.559 50.000 0.00 0.00 35.20 4.00
2042 2064 1.839994 CCTGTTTAGATCAGAGCCCCA 59.160 52.381 0.00 0.00 35.20 4.96
2043 2065 1.475930 GCCTGTTTAGATCAGAGCCCC 60.476 57.143 0.00 0.00 35.20 5.80
2044 2066 1.475930 GGCCTGTTTAGATCAGAGCCC 60.476 57.143 0.00 0.48 40.22 5.19
2045 2067 1.475930 GGGCCTGTTTAGATCAGAGCC 60.476 57.143 0.84 13.12 42.65 4.70
2046 2068 1.210478 TGGGCCTGTTTAGATCAGAGC 59.790 52.381 4.53 0.00 35.20 4.09
2047 2069 3.135348 TCATGGGCCTGTTTAGATCAGAG 59.865 47.826 4.53 0.00 35.20 3.35
2048 2070 3.114606 TCATGGGCCTGTTTAGATCAGA 58.885 45.455 4.53 0.00 35.20 3.27
2049 2071 3.565764 TCATGGGCCTGTTTAGATCAG 57.434 47.619 4.53 0.00 0.00 2.90
2050 2072 5.645056 TTATCATGGGCCTGTTTAGATCA 57.355 39.130 4.53 0.00 0.00 2.92
2051 2073 6.240894 TGATTATCATGGGCCTGTTTAGATC 58.759 40.000 4.53 0.49 0.00 2.75
2052 2074 6.204852 TGATTATCATGGGCCTGTTTAGAT 57.795 37.500 4.53 0.89 0.00 1.98
2053 2075 5.645056 TGATTATCATGGGCCTGTTTAGA 57.355 39.130 4.53 0.00 0.00 2.10
2054 2076 6.547141 TCTTTGATTATCATGGGCCTGTTTAG 59.453 38.462 4.53 0.00 0.00 1.85
2055 2077 6.321181 GTCTTTGATTATCATGGGCCTGTTTA 59.679 38.462 4.53 0.00 0.00 2.01
2056 2078 5.127682 GTCTTTGATTATCATGGGCCTGTTT 59.872 40.000 4.53 0.00 0.00 2.83
2057 2079 4.646492 GTCTTTGATTATCATGGGCCTGTT 59.354 41.667 4.53 0.00 0.00 3.16
2058 2080 4.079558 AGTCTTTGATTATCATGGGCCTGT 60.080 41.667 4.53 0.00 0.00 4.00
2059 2081 4.467769 AGTCTTTGATTATCATGGGCCTG 58.532 43.478 4.53 0.24 0.00 4.85
2060 2082 4.803329 AGTCTTTGATTATCATGGGCCT 57.197 40.909 4.53 0.00 0.00 5.19
2061 2083 4.452455 CGTAGTCTTTGATTATCATGGGCC 59.548 45.833 0.00 0.00 0.00 5.80
2062 2084 5.057149 ACGTAGTCTTTGATTATCATGGGC 58.943 41.667 0.00 0.00 29.74 5.36
2063 2085 6.366332 GCTACGTAGTCTTTGATTATCATGGG 59.634 42.308 22.98 0.00 43.93 4.00
2064 2086 7.148641 AGCTACGTAGTCTTTGATTATCATGG 58.851 38.462 22.98 0.00 43.93 3.66
2065 2087 9.847706 ATAGCTACGTAGTCTTTGATTATCATG 57.152 33.333 22.98 0.00 43.93 3.07
2067 2089 9.678941 CAATAGCTACGTAGTCTTTGATTATCA 57.321 33.333 22.98 0.00 43.93 2.15
2068 2090 9.894783 TCAATAGCTACGTAGTCTTTGATTATC 57.105 33.333 22.98 2.70 43.93 1.75
2070 2092 9.894783 GATCAATAGCTACGTAGTCTTTGATTA 57.105 33.333 28.92 15.88 43.93 1.75
2071 2093 7.868415 GGATCAATAGCTACGTAGTCTTTGATT 59.132 37.037 28.92 19.03 43.93 2.57
2072 2094 7.014326 TGGATCAATAGCTACGTAGTCTTTGAT 59.986 37.037 28.81 28.81 43.93 2.57
2073 2095 6.320418 TGGATCAATAGCTACGTAGTCTTTGA 59.680 38.462 24.74 24.74 43.93 2.69
2074 2096 6.504398 TGGATCAATAGCTACGTAGTCTTTG 58.496 40.000 22.98 20.57 43.93 2.77
2075 2097 6.710597 TGGATCAATAGCTACGTAGTCTTT 57.289 37.500 22.98 12.75 43.93 2.52
2076 2098 6.710597 TTGGATCAATAGCTACGTAGTCTT 57.289 37.500 22.98 11.54 43.93 3.01
2077 2099 6.710597 TTTGGATCAATAGCTACGTAGTCT 57.289 37.500 22.98 20.63 43.93 3.24
2078 2100 7.948278 ATTTTGGATCAATAGCTACGTAGTC 57.052 36.000 22.98 15.16 43.93 2.59
2080 2102 8.826710 TCAAATTTTGGATCAATAGCTACGTAG 58.173 33.333 18.47 18.47 0.00 3.51
2081 2103 8.725405 TCAAATTTTGGATCAATAGCTACGTA 57.275 30.769 9.18 0.00 0.00 3.57
2082 2104 7.624360 TCAAATTTTGGATCAATAGCTACGT 57.376 32.000 9.18 0.00 0.00 3.57
2083 2105 9.520204 AAATCAAATTTTGGATCAATAGCTACG 57.480 29.630 9.18 0.00 0.00 3.51
2093 2115 9.028185 GCTGTCTCATAAATCAAATTTTGGATC 57.972 33.333 9.18 0.00 33.82 3.36
2094 2116 8.533657 TGCTGTCTCATAAATCAAATTTTGGAT 58.466 29.630 9.18 0.00 33.82 3.41
2095 2117 7.894708 TGCTGTCTCATAAATCAAATTTTGGA 58.105 30.769 9.18 0.00 33.82 3.53
2096 2118 8.712285 ATGCTGTCTCATAAATCAAATTTTGG 57.288 30.769 9.18 0.00 33.82 3.28
2097 2119 9.361315 TGATGCTGTCTCATAAATCAAATTTTG 57.639 29.630 2.59 2.59 33.82 2.44
2098 2120 9.932207 TTGATGCTGTCTCATAAATCAAATTTT 57.068 25.926 0.00 0.00 32.64 1.82
2099 2121 9.932207 TTTGATGCTGTCTCATAAATCAAATTT 57.068 25.926 4.90 0.00 38.45 1.82
2100 2122 9.582431 CTTTGATGCTGTCTCATAAATCAAATT 57.418 29.630 8.56 0.00 40.96 1.82
2101 2123 8.963725 TCTTTGATGCTGTCTCATAAATCAAAT 58.036 29.630 8.56 0.00 40.96 2.32
2102 2124 8.239314 GTCTTTGATGCTGTCTCATAAATCAAA 58.761 33.333 8.00 8.00 40.08 2.69
2103 2125 7.148188 GGTCTTTGATGCTGTCTCATAAATCAA 60.148 37.037 0.00 0.00 33.47 2.57
2104 2126 6.317140 GGTCTTTGATGCTGTCTCATAAATCA 59.683 38.462 0.00 0.00 0.00 2.57
2105 2127 6.510799 CGGTCTTTGATGCTGTCTCATAAATC 60.511 42.308 0.00 0.00 0.00 2.17
2106 2128 5.295292 CGGTCTTTGATGCTGTCTCATAAAT 59.705 40.000 0.00 0.00 0.00 1.40
2107 2129 4.631377 CGGTCTTTGATGCTGTCTCATAAA 59.369 41.667 0.00 0.00 0.00 1.40
2108 2130 4.081697 TCGGTCTTTGATGCTGTCTCATAA 60.082 41.667 0.00 0.00 0.00 1.90
2109 2131 3.447229 TCGGTCTTTGATGCTGTCTCATA 59.553 43.478 0.00 0.00 0.00 2.15
2110 2132 2.234661 TCGGTCTTTGATGCTGTCTCAT 59.765 45.455 0.00 0.00 0.00 2.90
2111 2133 1.618343 TCGGTCTTTGATGCTGTCTCA 59.382 47.619 0.00 0.00 0.00 3.27
2112 2134 1.996191 GTCGGTCTTTGATGCTGTCTC 59.004 52.381 0.00 0.00 0.00 3.36
2113 2135 1.344438 TGTCGGTCTTTGATGCTGTCT 59.656 47.619 0.00 0.00 0.00 3.41
2114 2136 1.795768 TGTCGGTCTTTGATGCTGTC 58.204 50.000 0.00 0.00 0.00 3.51
2115 2137 2.479566 ATGTCGGTCTTTGATGCTGT 57.520 45.000 0.00 0.00 0.00 4.40
2116 2138 3.837213 AAATGTCGGTCTTTGATGCTG 57.163 42.857 0.00 0.00 0.00 4.41
2117 2139 4.074970 AGAAAATGTCGGTCTTTGATGCT 58.925 39.130 0.00 0.00 0.00 3.79
2118 2140 4.425577 AGAAAATGTCGGTCTTTGATGC 57.574 40.909 0.00 0.00 0.00 3.91
2119 2141 5.352569 AGCTAGAAAATGTCGGTCTTTGATG 59.647 40.000 0.00 0.00 0.00 3.07
2120 2142 5.491982 AGCTAGAAAATGTCGGTCTTTGAT 58.508 37.500 0.00 0.00 0.00 2.57
2121 2143 4.894784 AGCTAGAAAATGTCGGTCTTTGA 58.105 39.130 0.00 0.00 0.00 2.69
2122 2144 5.869888 ACTAGCTAGAAAATGTCGGTCTTTG 59.130 40.000 27.45 0.00 0.00 2.77
2123 2145 6.038997 ACTAGCTAGAAAATGTCGGTCTTT 57.961 37.500 27.45 0.00 0.00 2.52
2124 2146 5.662674 ACTAGCTAGAAAATGTCGGTCTT 57.337 39.130 27.45 0.00 0.00 3.01
2125 2147 5.047235 ACAACTAGCTAGAAAATGTCGGTCT 60.047 40.000 27.45 0.00 0.00 3.85
2126 2148 5.169295 ACAACTAGCTAGAAAATGTCGGTC 58.831 41.667 27.45 0.00 0.00 4.79
2127 2149 5.148651 ACAACTAGCTAGAAAATGTCGGT 57.851 39.130 27.45 8.10 0.00 4.69
2128 2150 5.637810 TGAACAACTAGCTAGAAAATGTCGG 59.362 40.000 27.45 7.55 0.00 4.79
2129 2151 6.706055 TGAACAACTAGCTAGAAAATGTCG 57.294 37.500 27.45 8.04 0.00 4.35
2144 2166 9.136952 GTCGTAGAACTACAAATATGAACAACT 57.863 33.333 11.65 0.00 39.69 3.16
2145 2167 9.136952 AGTCGTAGAACTACAAATATGAACAAC 57.863 33.333 11.65 0.00 39.69 3.32
2147 2169 9.778993 GTAGTCGTAGAACTACAAATATGAACA 57.221 33.333 11.65 0.00 39.69 3.18
2148 2170 9.778993 TGTAGTCGTAGAACTACAAATATGAAC 57.221 33.333 13.02 1.24 42.99 3.18
2149 2171 9.778993 GTGTAGTCGTAGAACTACAAATATGAA 57.221 33.333 16.11 0.00 45.25 2.57
2150 2172 9.170734 AGTGTAGTCGTAGAACTACAAATATGA 57.829 33.333 16.11 0.00 45.25 2.15
2151 2173 9.784680 AAGTGTAGTCGTAGAACTACAAATATG 57.215 33.333 16.11 0.00 45.25 1.78
2153 2175 9.224267 AGAAGTGTAGTCGTAGAACTACAAATA 57.776 33.333 16.11 0.00 45.25 1.40
2154 2176 8.108551 AGAAGTGTAGTCGTAGAACTACAAAT 57.891 34.615 16.11 9.57 45.25 2.32
2155 2177 7.502120 AGAAGTGTAGTCGTAGAACTACAAA 57.498 36.000 16.11 0.00 45.25 2.83
2156 2178 7.148738 CGTAGAAGTGTAGTCGTAGAACTACAA 60.149 40.741 16.11 1.14 45.25 2.41
2157 2179 6.309009 CGTAGAAGTGTAGTCGTAGAACTACA 59.691 42.308 11.72 11.72 43.37 2.74
2158 2180 6.528423 TCGTAGAAGTGTAGTCGTAGAACTAC 59.472 42.308 7.15 7.15 39.69 2.73
2159 2181 6.621613 TCGTAGAAGTGTAGTCGTAGAACTA 58.378 40.000 0.00 0.00 39.69 2.24
2160 2182 5.473931 TCGTAGAAGTGTAGTCGTAGAACT 58.526 41.667 0.00 0.00 39.69 3.01
2161 2183 5.769967 TCGTAGAAGTGTAGTCGTAGAAC 57.230 43.478 0.00 0.00 39.69 3.01
2162 2184 6.974932 AATCGTAGAAGTGTAGTCGTAGAA 57.025 37.500 0.00 0.00 43.58 2.10
2163 2185 6.591448 TCAAATCGTAGAAGTGTAGTCGTAGA 59.409 38.462 0.00 0.00 43.58 2.59
2164 2186 6.769076 TCAAATCGTAGAAGTGTAGTCGTAG 58.231 40.000 0.00 0.00 43.58 3.51
2165 2187 6.726258 TCAAATCGTAGAAGTGTAGTCGTA 57.274 37.500 0.00 0.00 43.58 3.43
2166 2188 5.618056 TCAAATCGTAGAAGTGTAGTCGT 57.382 39.130 0.00 0.00 43.58 4.34
2167 2189 6.800408 TCTTTCAAATCGTAGAAGTGTAGTCG 59.200 38.462 0.00 0.00 43.58 4.18
2168 2190 7.201249 CGTCTTTCAAATCGTAGAAGTGTAGTC 60.201 40.741 0.00 0.00 43.58 2.59
2169 2191 6.581542 CGTCTTTCAAATCGTAGAAGTGTAGT 59.418 38.462 0.00 0.00 43.58 2.73
2170 2192 6.452611 GCGTCTTTCAAATCGTAGAAGTGTAG 60.453 42.308 0.00 0.00 43.58 2.74
2171 2193 5.344128 GCGTCTTTCAAATCGTAGAAGTGTA 59.656 40.000 0.00 0.00 43.58 2.90
2172 2194 4.150098 GCGTCTTTCAAATCGTAGAAGTGT 59.850 41.667 0.00 0.00 43.58 3.55
2173 2195 4.629065 GCGTCTTTCAAATCGTAGAAGTG 58.371 43.478 0.00 0.00 43.58 3.16
2174 2196 3.364023 CGCGTCTTTCAAATCGTAGAAGT 59.636 43.478 0.00 0.00 43.58 3.01
2175 2197 3.606777 TCGCGTCTTTCAAATCGTAGAAG 59.393 43.478 5.77 0.00 43.58 2.85
2176 2198 3.567530 TCGCGTCTTTCAAATCGTAGAA 58.432 40.909 5.77 0.00 43.58 2.10
2177 2199 3.206034 TCGCGTCTTTCAAATCGTAGA 57.794 42.857 5.77 0.00 45.75 2.59
2178 2200 3.646303 GTTCGCGTCTTTCAAATCGTAG 58.354 45.455 5.77 0.00 0.00 3.51
2179 2201 2.089427 CGTTCGCGTCTTTCAAATCGTA 59.911 45.455 5.77 0.00 35.57 3.43
2180 2202 1.136721 CGTTCGCGTCTTTCAAATCGT 60.137 47.619 5.77 0.00 35.57 3.73
2181 2203 1.123576 TCGTTCGCGTCTTTCAAATCG 59.876 47.619 5.77 0.00 42.11 3.34
2182 2204 2.848562 TCGTTCGCGTCTTTCAAATC 57.151 45.000 5.77 0.00 42.11 2.17
2183 2205 3.806316 ATTCGTTCGCGTCTTTCAAAT 57.194 38.095 5.77 0.00 42.11 2.32
2184 2206 3.595709 AATTCGTTCGCGTCTTTCAAA 57.404 38.095 5.77 0.00 42.11 2.69
2185 2207 3.001431 TCAAATTCGTTCGCGTCTTTCAA 59.999 39.130 5.77 0.00 42.11 2.69
2186 2208 2.540516 TCAAATTCGTTCGCGTCTTTCA 59.459 40.909 5.77 0.00 42.11 2.69
2187 2209 3.163642 TCAAATTCGTTCGCGTCTTTC 57.836 42.857 5.77 0.00 42.11 2.62
2188 2210 3.185594 TCATCAAATTCGTTCGCGTCTTT 59.814 39.130 5.77 0.00 42.11 2.52
2189 2211 2.734606 TCATCAAATTCGTTCGCGTCTT 59.265 40.909 5.77 0.00 42.11 3.01
2190 2212 2.333926 TCATCAAATTCGTTCGCGTCT 58.666 42.857 5.77 0.00 42.11 4.18
2191 2213 2.780361 TCATCAAATTCGTTCGCGTC 57.220 45.000 5.77 0.00 42.11 5.19
2192 2214 4.850859 TTATCATCAAATTCGTTCGCGT 57.149 36.364 5.77 0.00 42.11 6.01
2193 2215 6.533192 TTTTTATCATCAAATTCGTTCGCG 57.467 33.333 0.00 0.00 42.98 5.87
2219 2241 5.268107 CCGAACGATAAAAACGGTTAGTT 57.732 39.130 0.00 0.00 46.76 2.24
2220 2242 4.908966 CCGAACGATAAAAACGGTTAGT 57.091 40.909 0.00 0.00 38.97 2.24
2226 2248 3.120786 AGCTTGACCGAACGATAAAAACG 60.121 43.478 0.00 0.00 0.00 3.60
2227 2249 4.084223 TGAGCTTGACCGAACGATAAAAAC 60.084 41.667 0.00 0.00 0.00 2.43
2228 2250 4.059511 TGAGCTTGACCGAACGATAAAAA 58.940 39.130 0.00 0.00 0.00 1.94
2229 2251 3.655486 TGAGCTTGACCGAACGATAAAA 58.345 40.909 0.00 0.00 0.00 1.52
2230 2252 3.306917 TGAGCTTGACCGAACGATAAA 57.693 42.857 0.00 0.00 0.00 1.40
2231 2253 3.444916 GATGAGCTTGACCGAACGATAA 58.555 45.455 0.00 0.00 0.00 1.75
2232 2254 2.223735 GGATGAGCTTGACCGAACGATA 60.224 50.000 0.00 0.00 0.00 2.92
2233 2255 1.471676 GGATGAGCTTGACCGAACGAT 60.472 52.381 0.00 0.00 0.00 3.73
2234 2256 0.108804 GGATGAGCTTGACCGAACGA 60.109 55.000 0.00 0.00 0.00 3.85
2235 2257 1.413767 CGGATGAGCTTGACCGAACG 61.414 60.000 17.26 0.00 46.94 3.95
2236 2258 0.389948 ACGGATGAGCTTGACCGAAC 60.390 55.000 25.03 0.00 46.94 3.95
2237 2259 0.389817 CACGGATGAGCTTGACCGAA 60.390 55.000 25.03 0.00 46.94 4.30
2238 2260 1.215382 CACGGATGAGCTTGACCGA 59.785 57.895 25.03 0.00 46.94 4.69
2240 2262 1.021390 CCACACGGATGAGCTTGACC 61.021 60.000 0.00 0.00 0.00 4.02
2241 2263 1.639298 GCCACACGGATGAGCTTGAC 61.639 60.000 0.00 0.00 0.00 3.18
2242 2264 1.375908 GCCACACGGATGAGCTTGA 60.376 57.895 0.00 0.00 0.00 3.02
2243 2265 2.401766 GGCCACACGGATGAGCTTG 61.402 63.158 0.00 0.00 0.00 4.01
2244 2266 2.045926 GGCCACACGGATGAGCTT 60.046 61.111 0.00 0.00 0.00 3.74
2245 2267 4.457496 CGGCCACACGGATGAGCT 62.457 66.667 2.24 0.00 0.00 4.09
2266 2288 0.179045 ATCTACGGTGCATTCTGGCC 60.179 55.000 0.00 0.00 0.00 5.36
2267 2289 2.526304 TATCTACGGTGCATTCTGGC 57.474 50.000 0.00 0.00 0.00 4.85
2268 2290 3.792401 TGTTATCTACGGTGCATTCTGG 58.208 45.455 0.00 0.00 0.00 3.86
2269 2291 3.804325 CCTGTTATCTACGGTGCATTCTG 59.196 47.826 0.00 0.00 0.00 3.02
2270 2292 3.704566 TCCTGTTATCTACGGTGCATTCT 59.295 43.478 0.00 0.00 0.00 2.40
2271 2293 4.051922 CTCCTGTTATCTACGGTGCATTC 58.948 47.826 0.00 0.00 0.00 2.67
2272 2294 3.181465 CCTCCTGTTATCTACGGTGCATT 60.181 47.826 0.00 0.00 0.00 3.56
2273 2295 2.365617 CCTCCTGTTATCTACGGTGCAT 59.634 50.000 0.00 0.00 0.00 3.96
2274 2296 1.754803 CCTCCTGTTATCTACGGTGCA 59.245 52.381 0.00 0.00 0.00 4.57
2275 2297 1.538419 GCCTCCTGTTATCTACGGTGC 60.538 57.143 0.00 0.00 0.00 5.01
2276 2298 1.269102 CGCCTCCTGTTATCTACGGTG 60.269 57.143 0.00 0.00 0.00 4.94
2277 2299 1.030457 CGCCTCCTGTTATCTACGGT 58.970 55.000 0.00 0.00 0.00 4.83
2278 2300 0.318784 GCGCCTCCTGTTATCTACGG 60.319 60.000 0.00 0.00 0.00 4.02
2279 2301 0.669077 AGCGCCTCCTGTTATCTACG 59.331 55.000 2.29 0.00 0.00 3.51
2280 2302 2.474816 CAAGCGCCTCCTGTTATCTAC 58.525 52.381 2.29 0.00 0.00 2.59
2281 2303 1.202533 GCAAGCGCCTCCTGTTATCTA 60.203 52.381 2.29 0.00 0.00 1.98
2282 2304 0.462759 GCAAGCGCCTCCTGTTATCT 60.463 55.000 2.29 0.00 0.00 1.98
2283 2305 0.744414 TGCAAGCGCCTCCTGTTATC 60.744 55.000 2.29 0.00 37.32 1.75
2284 2306 0.107017 ATGCAAGCGCCTCCTGTTAT 60.107 50.000 2.29 0.00 37.32 1.89
2285 2307 0.539518 TATGCAAGCGCCTCCTGTTA 59.460 50.000 2.29 0.00 37.32 2.41
2286 2308 0.107017 ATATGCAAGCGCCTCCTGTT 60.107 50.000 2.29 0.00 37.32 3.16
2287 2309 0.533755 GATATGCAAGCGCCTCCTGT 60.534 55.000 2.29 0.00 37.32 4.00
2288 2310 0.250209 AGATATGCAAGCGCCTCCTG 60.250 55.000 2.29 0.00 37.32 3.86
2289 2311 0.034616 GAGATATGCAAGCGCCTCCT 59.965 55.000 2.29 0.00 37.32 3.69
2290 2312 0.952984 GGAGATATGCAAGCGCCTCC 60.953 60.000 2.29 6.55 36.24 4.30
2291 2313 0.034616 AGGAGATATGCAAGCGCCTC 59.965 55.000 2.29 0.00 37.32 4.70
2292 2314 0.471617 AAGGAGATATGCAAGCGCCT 59.528 50.000 2.29 0.00 37.32 5.52
2293 2315 0.871057 GAAGGAGATATGCAAGCGCC 59.129 55.000 2.29 0.00 37.32 6.53
2294 2316 0.871057 GGAAGGAGATATGCAAGCGC 59.129 55.000 0.00 0.00 39.24 5.92
2295 2317 1.071385 AGGGAAGGAGATATGCAAGCG 59.929 52.381 0.00 0.00 0.00 4.68
2296 2318 2.947127 AGGGAAGGAGATATGCAAGC 57.053 50.000 0.00 0.00 0.00 4.01
2297 2319 4.504689 GGAGAAGGGAAGGAGATATGCAAG 60.505 50.000 0.00 0.00 0.00 4.01
2298 2320 3.392616 GGAGAAGGGAAGGAGATATGCAA 59.607 47.826 0.00 0.00 0.00 4.08
2299 2321 2.975489 GGAGAAGGGAAGGAGATATGCA 59.025 50.000 0.00 0.00 0.00 3.96
2300 2322 2.975489 TGGAGAAGGGAAGGAGATATGC 59.025 50.000 0.00 0.00 0.00 3.14
2301 2323 4.040217 CAGTGGAGAAGGGAAGGAGATATG 59.960 50.000 0.00 0.00 0.00 1.78
2302 2324 4.230455 CAGTGGAGAAGGGAAGGAGATAT 58.770 47.826 0.00 0.00 0.00 1.63
2303 2325 3.647636 CAGTGGAGAAGGGAAGGAGATA 58.352 50.000 0.00 0.00 0.00 1.98
2304 2326 2.476199 CAGTGGAGAAGGGAAGGAGAT 58.524 52.381 0.00 0.00 0.00 2.75
2305 2327 1.944177 CAGTGGAGAAGGGAAGGAGA 58.056 55.000 0.00 0.00 0.00 3.71
2306 2328 0.251634 GCAGTGGAGAAGGGAAGGAG 59.748 60.000 0.00 0.00 0.00 3.69
2307 2329 1.201429 GGCAGTGGAGAAGGGAAGGA 61.201 60.000 0.00 0.00 0.00 3.36
2308 2330 1.301293 GGCAGTGGAGAAGGGAAGG 59.699 63.158 0.00 0.00 0.00 3.46
2309 2331 0.035630 CTGGCAGTGGAGAAGGGAAG 60.036 60.000 6.28 0.00 0.00 3.46
2310 2332 0.473694 TCTGGCAGTGGAGAAGGGAA 60.474 55.000 15.27 0.00 0.00 3.97
2311 2333 0.252881 ATCTGGCAGTGGAGAAGGGA 60.253 55.000 15.27 0.00 0.00 4.20
2312 2334 0.622665 AATCTGGCAGTGGAGAAGGG 59.377 55.000 15.27 0.00 0.00 3.95
2313 2335 1.741732 CGAATCTGGCAGTGGAGAAGG 60.742 57.143 15.27 0.00 0.00 3.46
2314 2336 1.205655 TCGAATCTGGCAGTGGAGAAG 59.794 52.381 15.27 1.48 0.00 2.85
2315 2337 1.266178 TCGAATCTGGCAGTGGAGAA 58.734 50.000 15.27 0.00 0.00 2.87
2316 2338 1.489481 ATCGAATCTGGCAGTGGAGA 58.511 50.000 15.27 10.68 0.00 3.71
2317 2339 2.625314 TCTATCGAATCTGGCAGTGGAG 59.375 50.000 15.27 5.50 0.00 3.86
2318 2340 2.362397 GTCTATCGAATCTGGCAGTGGA 59.638 50.000 15.27 3.21 0.00 4.02
2319 2341 2.748605 GTCTATCGAATCTGGCAGTGG 58.251 52.381 15.27 0.00 0.00 4.00
2320 2342 2.033424 TCGTCTATCGAATCTGGCAGTG 59.967 50.000 15.27 3.56 45.98 3.66
2321 2343 2.298610 TCGTCTATCGAATCTGGCAGT 58.701 47.619 15.27 0.00 45.98 4.40
2332 2354 1.201976 CGCCTGCTAGATCGTCTATCG 60.202 57.143 0.00 0.00 39.79 2.92
2333 2355 1.131504 CCGCCTGCTAGATCGTCTATC 59.868 57.143 0.00 0.00 34.52 2.08
2334 2356 1.169577 CCGCCTGCTAGATCGTCTAT 58.830 55.000 0.00 0.00 0.00 1.98
2335 2357 0.179026 ACCGCCTGCTAGATCGTCTA 60.179 55.000 0.00 0.00 0.00 2.59
2336 2358 1.448922 GACCGCCTGCTAGATCGTCT 61.449 60.000 0.00 0.00 0.00 4.18
2337 2359 1.008309 GACCGCCTGCTAGATCGTC 60.008 63.158 0.00 0.00 0.00 4.20
2338 2360 1.454111 AGACCGCCTGCTAGATCGT 60.454 57.895 0.00 0.00 0.00 3.73
2339 2361 1.007964 CAGACCGCCTGCTAGATCG 60.008 63.158 0.00 0.00 35.89 3.69
2372 2394 3.777925 CTGCGTTCGAGGTTGCCG 61.778 66.667 0.00 0.00 0.00 5.69
2373 2395 3.423154 CCTGCGTTCGAGGTTGCC 61.423 66.667 0.00 0.00 0.00 4.52
2374 2396 2.357034 TCCTGCGTTCGAGGTTGC 60.357 61.111 0.00 0.00 31.85 4.17
2375 2397 2.383527 GCTCCTGCGTTCGAGGTTG 61.384 63.158 0.00 1.04 31.85 3.77
2376 2398 2.048127 GCTCCTGCGTTCGAGGTT 60.048 61.111 0.00 0.00 31.85 3.50
2377 2399 3.288308 CTGCTCCTGCGTTCGAGGT 62.288 63.158 0.00 0.00 43.34 3.85
2378 2400 2.290122 ATCTGCTCCTGCGTTCGAGG 62.290 60.000 0.00 0.93 43.34 4.63
2379 2401 0.459237 AATCTGCTCCTGCGTTCGAG 60.459 55.000 0.00 0.00 43.34 4.04
2380 2402 0.737367 CAATCTGCTCCTGCGTTCGA 60.737 55.000 0.00 0.00 43.34 3.71
2381 2403 1.699656 CCAATCTGCTCCTGCGTTCG 61.700 60.000 0.00 0.00 43.34 3.95
2382 2404 0.391661 TCCAATCTGCTCCTGCGTTC 60.392 55.000 0.00 0.00 43.34 3.95
2383 2405 0.036732 TTCCAATCTGCTCCTGCGTT 59.963 50.000 0.00 0.00 43.34 4.84
2384 2406 0.036732 TTTCCAATCTGCTCCTGCGT 59.963 50.000 0.00 0.00 43.34 5.24
2385 2407 0.449388 GTTTCCAATCTGCTCCTGCG 59.551 55.000 0.00 0.00 43.34 5.18
2386 2408 0.449388 CGTTTCCAATCTGCTCCTGC 59.551 55.000 0.00 0.00 40.20 4.85
2387 2409 2.099141 TCGTTTCCAATCTGCTCCTG 57.901 50.000 0.00 0.00 0.00 3.86
2388 2410 2.704572 CTTCGTTTCCAATCTGCTCCT 58.295 47.619 0.00 0.00 0.00 3.69
2389 2411 1.131315 GCTTCGTTTCCAATCTGCTCC 59.869 52.381 0.00 0.00 0.00 4.70
2390 2412 1.201965 CGCTTCGTTTCCAATCTGCTC 60.202 52.381 0.00 0.00 0.00 4.26
2391 2413 0.798776 CGCTTCGTTTCCAATCTGCT 59.201 50.000 0.00 0.00 0.00 4.24
2392 2414 0.796312 TCGCTTCGTTTCCAATCTGC 59.204 50.000 0.00 0.00 0.00 4.26
2393 2415 3.747099 AATCGCTTCGTTTCCAATCTG 57.253 42.857 0.00 0.00 0.00 2.90
2394 2416 4.755411 TCTAATCGCTTCGTTTCCAATCT 58.245 39.130 0.00 0.00 0.00 2.40
2395 2417 5.435557 CATCTAATCGCTTCGTTTCCAATC 58.564 41.667 0.00 0.00 0.00 2.67
2396 2418 4.273480 CCATCTAATCGCTTCGTTTCCAAT 59.727 41.667 0.00 0.00 0.00 3.16
2397 2419 3.621268 CCATCTAATCGCTTCGTTTCCAA 59.379 43.478 0.00 0.00 0.00 3.53
2398 2420 3.194861 CCATCTAATCGCTTCGTTTCCA 58.805 45.455 0.00 0.00 0.00 3.53
2399 2421 2.544267 CCCATCTAATCGCTTCGTTTCC 59.456 50.000 0.00 0.00 0.00 3.13
2400 2422 3.454375 TCCCATCTAATCGCTTCGTTTC 58.546 45.455 0.00 0.00 0.00 2.78
2401 2423 3.536956 TCCCATCTAATCGCTTCGTTT 57.463 42.857 0.00 0.00 0.00 3.60
2402 2424 3.322254 AGATCCCATCTAATCGCTTCGTT 59.678 43.478 0.00 0.00 38.00 3.85
2403 2425 2.894126 AGATCCCATCTAATCGCTTCGT 59.106 45.455 0.00 0.00 38.00 3.85
2404 2426 3.584406 AGATCCCATCTAATCGCTTCG 57.416 47.619 0.00 0.00 38.00 3.79
2405 2427 6.625873 AAAAAGATCCCATCTAATCGCTTC 57.374 37.500 0.00 0.00 39.08 3.86
2427 2449 9.273137 AGATCTCCTCTAATCACCTCTTAAAAA 57.727 33.333 0.00 0.00 30.26 1.94
2428 2450 8.846423 AGATCTCCTCTAATCACCTCTTAAAA 57.154 34.615 0.00 0.00 30.26 1.52
2429 2451 9.937876 TTAGATCTCCTCTAATCACCTCTTAAA 57.062 33.333 0.00 0.00 40.72 1.52
2430 2452 9.357161 GTTAGATCTCCTCTAATCACCTCTTAA 57.643 37.037 0.00 0.00 45.78 1.85
2431 2453 8.729047 AGTTAGATCTCCTCTAATCACCTCTTA 58.271 37.037 0.00 0.00 45.78 2.10
2432 2454 7.505585 CAGTTAGATCTCCTCTAATCACCTCTT 59.494 40.741 0.00 0.00 45.78 2.85
2433 2455 7.004086 CAGTTAGATCTCCTCTAATCACCTCT 58.996 42.308 0.00 0.00 45.78 3.69
2434 2456 6.775629 ACAGTTAGATCTCCTCTAATCACCTC 59.224 42.308 0.00 0.00 45.78 3.85
2435 2457 6.549364 CACAGTTAGATCTCCTCTAATCACCT 59.451 42.308 0.00 0.00 45.78 4.00
2436 2458 6.737346 GCACAGTTAGATCTCCTCTAATCACC 60.737 46.154 0.00 0.00 45.78 4.02
2437 2459 6.212955 GCACAGTTAGATCTCCTCTAATCAC 58.787 44.000 0.00 0.00 45.78 3.06
2438 2460 5.303078 GGCACAGTTAGATCTCCTCTAATCA 59.697 44.000 0.00 0.00 45.78 2.57
2439 2461 5.538433 AGGCACAGTTAGATCTCCTCTAATC 59.462 44.000 0.00 0.00 45.78 1.75
2440 2462 5.463154 AGGCACAGTTAGATCTCCTCTAAT 58.537 41.667 0.00 0.00 45.78 1.73
2441 2463 4.873010 AGGCACAGTTAGATCTCCTCTAA 58.127 43.478 0.00 0.00 42.84 2.10
2442 2464 4.528076 AGGCACAGTTAGATCTCCTCTA 57.472 45.455 0.00 0.00 35.28 2.43
2443 2465 3.396685 AGGCACAGTTAGATCTCCTCT 57.603 47.619 0.00 0.00 38.06 3.69
2444 2466 3.003897 CGTAGGCACAGTTAGATCTCCTC 59.996 52.174 0.00 0.00 0.00 3.71
2445 2467 2.952978 CGTAGGCACAGTTAGATCTCCT 59.047 50.000 0.00 0.00 0.00 3.69
2446 2468 2.034812 CCGTAGGCACAGTTAGATCTCC 59.965 54.545 0.00 0.00 46.14 3.71
2447 2469 3.357166 CCGTAGGCACAGTTAGATCTC 57.643 52.381 0.00 0.00 46.14 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.