Multiple sequence alignment - TraesCS1D01G382400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G382400 chr1D 100.000 3775 0 0 1 3775 457532727 457528953 0.000000e+00 6972.0
1 TraesCS1D01G382400 chr1A 90.275 2622 134 51 526 3067 550109155 550111735 0.000000e+00 3317.0
2 TraesCS1D01G382400 chr1B 90.247 2389 129 39 526 2871 627096968 627099295 0.000000e+00 3025.0
3 TraesCS1D01G382400 chr1B 84.713 314 34 12 2869 3170 627106893 627107204 6.130000e-78 302.0
4 TraesCS1D01G382400 chr1B 90.441 136 8 4 3040 3170 627107988 627108123 1.390000e-39 174.0
5 TraesCS1D01G382400 chr1B 89.209 139 9 5 3038 3170 627124742 627124880 6.480000e-38 169.0
6 TraesCS1D01G382400 chr1B 89.552 134 11 3 3211 3344 500998276 500998146 2.330000e-37 167.0
7 TraesCS1D01G382400 chr6D 91.945 509 40 1 1 508 470315571 470316079 0.000000e+00 712.0
8 TraesCS1D01G382400 chr6D 86.719 512 64 4 1 508 27472133 27471622 1.970000e-157 566.0
9 TraesCS1D01G382400 chr6D 81.203 133 18 6 3216 3344 452578093 452577964 2.400000e-17 100.0
10 TraesCS1D01G382400 chr2D 91.159 509 44 1 1 508 552608552 552608044 0.000000e+00 689.0
11 TraesCS1D01G382400 chr4D 86.719 512 64 4 1 508 112066742 112066231 1.970000e-157 566.0
12 TraesCS1D01G382400 chr4D 80.081 246 36 10 2356 2596 402233502 402233739 1.800000e-38 171.0
13 TraesCS1D01G382400 chr5A 86.693 511 63 4 1 508 205005398 205004890 2.550000e-156 562.0
14 TraesCS1D01G382400 chr5A 82.333 300 47 4 1015 1314 392038003 392037710 4.840000e-64 255.0
15 TraesCS1D01G382400 chr5A 81.716 268 48 1 1030 1297 392000555 392000289 4.910000e-54 222.0
16 TraesCS1D01G382400 chr4A 85.770 513 67 6 1 508 58811462 58810951 4.290000e-149 538.0
17 TraesCS1D01G382400 chr4A 80.716 363 58 9 3354 3709 712603873 712604230 4.800000e-69 272.0
18 TraesCS1D01G382400 chr4A 80.408 245 37 9 2356 2596 59671224 59671461 3.880000e-40 176.0
19 TraesCS1D01G382400 chr7A 85.965 513 57 15 1 505 269274625 269275130 5.550000e-148 534.0
20 TraesCS1D01G382400 chr3A 85.770 513 64 9 1 508 675885121 675884613 5.550000e-148 534.0
21 TraesCS1D01G382400 chrUn 85.547 512 69 5 1 508 211003687 211003177 7.180000e-147 531.0
22 TraesCS1D01G382400 chrUn 79.592 441 71 15 3345 3775 69181199 69181630 7.930000e-77 298.0
23 TraesCS1D01G382400 chrUn 81.739 230 38 4 3343 3568 69182582 69182353 4.980000e-44 189.0
24 TraesCS1D01G382400 chrUn 91.736 121 10 0 3224 3344 295717051 295716931 6.480000e-38 169.0
25 TraesCS1D01G382400 chr7D 85.986 421 44 9 3343 3759 617015165 617015574 1.610000e-118 436.0
26 TraesCS1D01G382400 chr7D 83.607 244 31 7 3354 3593 21615145 21614907 1.770000e-53 220.0
27 TraesCS1D01G382400 chr6A 79.271 439 74 13 3345 3775 53943019 53942590 1.330000e-74 291.0
28 TraesCS1D01G382400 chr6A 87.121 132 13 2 3213 3344 358595797 358595924 3.040000e-31 147.0
29 TraesCS1D01G382400 chr7B 79.854 412 63 17 3332 3730 627032011 627032415 2.220000e-72 283.0
30 TraesCS1D01G382400 chr7B 83.395 271 36 8 3345 3610 23521140 23521406 3.770000e-60 243.0
31 TraesCS1D01G382400 chr7B 89.552 67 5 1 3554 3618 109547637 109547571 2.420000e-12 84.2
32 TraesCS1D01G382400 chr5D 82.667 300 46 5 1015 1314 305709754 305710047 1.040000e-65 261.0
33 TraesCS1D01G382400 chr5D 81.053 285 53 1 1030 1314 305715052 305715335 3.790000e-55 226.0
34 TraesCS1D01G382400 chr5B 82.333 300 47 5 1015 1314 350368210 350368503 4.840000e-64 255.0
35 TraesCS1D01G382400 chr5B 82.069 290 50 2 1025 1314 350392282 350392569 2.910000e-61 246.0
36 TraesCS1D01G382400 chr5B 87.218 133 16 1 3212 3344 451173317 451173186 2.350000e-32 150.0
37 TraesCS1D01G382400 chr5B 81.757 148 11 11 3213 3346 523681522 523681667 3.990000e-20 110.0
38 TraesCS1D01G382400 chr6B 76.601 406 77 12 3338 3732 204343245 204342847 1.370000e-49 207.0
39 TraesCS1D01G382400 chr6B 91.489 47 4 0 3224 3270 23826889 23826935 8.750000e-07 65.8
40 TraesCS1D01G382400 chr3B 91.736 121 10 0 3224 3344 728493865 728493985 6.480000e-38 169.0
41 TraesCS1D01G382400 chr4B 78.008 241 50 3 2356 2596 497861424 497861661 8.450000e-32 148.0
42 TraesCS1D01G382400 chr2B 80.451 133 19 6 3216 3344 381391426 381391297 1.120000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G382400 chr1D 457528953 457532727 3774 True 6972 6972 100.000 1 3775 1 chr1D.!!$R1 3774
1 TraesCS1D01G382400 chr1A 550109155 550111735 2580 False 3317 3317 90.275 526 3067 1 chr1A.!!$F1 2541
2 TraesCS1D01G382400 chr1B 627096968 627099295 2327 False 3025 3025 90.247 526 2871 1 chr1B.!!$F1 2345
3 TraesCS1D01G382400 chr1B 627106893 627108123 1230 False 238 302 87.577 2869 3170 2 chr1B.!!$F3 301
4 TraesCS1D01G382400 chr6D 470315571 470316079 508 False 712 712 91.945 1 508 1 chr6D.!!$F1 507
5 TraesCS1D01G382400 chr6D 27471622 27472133 511 True 566 566 86.719 1 508 1 chr6D.!!$R1 507
6 TraesCS1D01G382400 chr2D 552608044 552608552 508 True 689 689 91.159 1 508 1 chr2D.!!$R1 507
7 TraesCS1D01G382400 chr4D 112066231 112066742 511 True 566 566 86.719 1 508 1 chr4D.!!$R1 507
8 TraesCS1D01G382400 chr5A 205004890 205005398 508 True 562 562 86.693 1 508 1 chr5A.!!$R1 507
9 TraesCS1D01G382400 chr4A 58810951 58811462 511 True 538 538 85.770 1 508 1 chr4A.!!$R1 507
10 TraesCS1D01G382400 chr7A 269274625 269275130 505 False 534 534 85.965 1 505 1 chr7A.!!$F1 504
11 TraesCS1D01G382400 chr3A 675884613 675885121 508 True 534 534 85.770 1 508 1 chr3A.!!$R1 507
12 TraesCS1D01G382400 chrUn 211003177 211003687 510 True 531 531 85.547 1 508 1 chrUn.!!$R2 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
561 577 0.319555 GCTCTGCTACCACGTTGTCA 60.320 55.0 0.00 0.00 0.00 3.58 F
1341 1407 0.886490 AGTTTCACTTCTGCCCGCAG 60.886 55.0 10.52 10.52 44.86 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2420 2543 0.732880 CGAACACCGACTCGAAGCAT 60.733 55.0 0.0 0.0 41.76 3.79 R
3121 4185 0.172578 TGTGCCTAACCGATCTCACG 59.827 55.0 0.0 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 88 5.180117 AGTGAAGTTGCTTTGTATGTAGCAG 59.820 40.000 0.00 0.00 46.95 4.24
198 206 5.802956 GCTTCCTTATAGCTCTATAGTTGCG 59.197 44.000 12.31 0.00 35.74 4.85
222 230 3.057736 CCATTGGACTCAAAGTTGCTCTG 60.058 47.826 0.00 0.00 36.36 3.35
223 232 1.597742 TGGACTCAAAGTTGCTCTGC 58.402 50.000 0.00 0.00 0.00 4.26
265 275 9.670442 AACCTACTCATATGGGATCTAGTTTTA 57.330 33.333 10.29 0.00 0.00 1.52
275 285 5.873164 TGGGATCTAGTTTTAAAGAACTCGC 59.127 40.000 0.00 0.00 40.24 5.03
313 324 3.056891 GGTGAAAGCGGAATTGGATTTCA 60.057 43.478 12.82 12.82 44.62 2.69
387 401 1.825474 CACGTGGGACAAGATCTAGGT 59.175 52.381 7.95 0.00 44.16 3.08
420 435 2.256591 GCCATGTGCGCTATGGGAG 61.257 63.158 31.38 16.09 44.21 4.30
488 504 9.875691 ACGGACATATACTTACTATATACGACA 57.124 33.333 0.00 0.00 30.64 4.35
508 524 1.544691 AGTACGCTCCAGACAACGAAT 59.455 47.619 0.00 0.00 0.00 3.34
509 525 2.751259 AGTACGCTCCAGACAACGAATA 59.249 45.455 0.00 0.00 0.00 1.75
510 526 2.961526 ACGCTCCAGACAACGAATAT 57.038 45.000 0.00 0.00 0.00 1.28
511 527 2.540515 ACGCTCCAGACAACGAATATG 58.459 47.619 0.00 0.00 0.00 1.78
512 528 2.165641 ACGCTCCAGACAACGAATATGA 59.834 45.455 0.00 0.00 0.00 2.15
513 529 3.181475 ACGCTCCAGACAACGAATATGAT 60.181 43.478 0.00 0.00 0.00 2.45
514 530 4.037565 ACGCTCCAGACAACGAATATGATA 59.962 41.667 0.00 0.00 0.00 2.15
515 531 5.164233 CGCTCCAGACAACGAATATGATAT 58.836 41.667 0.00 0.00 0.00 1.63
516 532 5.061435 CGCTCCAGACAACGAATATGATATG 59.939 44.000 0.00 0.00 0.00 1.78
517 533 5.928839 GCTCCAGACAACGAATATGATATGT 59.071 40.000 0.00 0.00 0.00 2.29
518 534 7.090808 GCTCCAGACAACGAATATGATATGTA 58.909 38.462 0.00 0.00 0.00 2.29
519 535 7.761704 GCTCCAGACAACGAATATGATATGTAT 59.238 37.037 0.00 0.00 0.00 2.29
522 538 9.855021 CCAGACAACGAATATGATATGTATACA 57.145 33.333 8.27 8.27 0.00 2.29
535 551 6.823182 TGATATGTATACATATGGCTTGGTGC 59.177 38.462 33.15 19.65 46.36 5.01
541 557 1.758280 CATATGGCTTGGTGCAATGGT 59.242 47.619 0.00 0.00 45.15 3.55
561 577 0.319555 GCTCTGCTACCACGTTGTCA 60.320 55.000 0.00 0.00 0.00 3.58
602 618 7.099764 TCTTGTTCACAATTTTGGTTTAGCAA 58.900 30.769 0.00 0.00 35.02 3.91
616 632 5.992217 TGGTTTAGCAATTTTACGCCAAAAT 59.008 32.000 3.21 3.21 46.56 1.82
617 633 7.152645 TGGTTTAGCAATTTTACGCCAAAATA 58.847 30.769 8.30 0.00 44.37 1.40
698 719 3.284793 TTCTGAAAACCGGTTCTTCCA 57.715 42.857 22.53 14.40 35.57 3.53
728 752 2.396590 AAAAGCCGCTATCCGAAAGA 57.603 45.000 0.00 0.00 40.02 2.52
759 788 3.585862 AGCCTTGCATACCGAATATACG 58.414 45.455 0.00 0.00 0.00 3.06
773 802 7.486647 ACCGAATATACGTGGATATATTGGAC 58.513 38.462 16.09 2.53 37.69 4.02
797 826 1.588667 GTGCAACCACCAAACAGCG 60.589 57.895 0.00 0.00 35.92 5.18
816 845 4.631377 CAGCGTTCTTGACTTGAATATCCA 59.369 41.667 0.00 0.00 0.00 3.41
834 870 1.153524 ACACCCACACACATGGCAT 59.846 52.632 0.00 0.00 38.55 4.40
839 875 1.187974 CCACACACATGGCATGGATT 58.812 50.000 29.49 11.69 31.52 3.01
1005 1062 4.959596 GGCGGCGGAGAGATGAGC 62.960 72.222 9.78 0.00 0.00 4.26
1014 1077 2.128853 GAGAGATGAGCGAGGCGGAG 62.129 65.000 0.00 0.00 0.00 4.63
1341 1407 0.886490 AGTTTCACTTCTGCCCGCAG 60.886 55.000 10.52 10.52 44.86 5.18
1347 1413 4.451150 TTCTGCCCGCAGCTACCG 62.451 66.667 11.92 0.00 43.31 4.02
1388 1454 1.133363 TCCCCTCTGTTTTCCGTGAA 58.867 50.000 0.00 0.00 0.00 3.18
1389 1455 1.491332 TCCCCTCTGTTTTCCGTGAAA 59.509 47.619 0.00 0.00 0.00 2.69
1390 1456 2.107552 TCCCCTCTGTTTTCCGTGAAAT 59.892 45.455 0.81 0.00 31.34 2.17
1391 1457 2.228822 CCCCTCTGTTTTCCGTGAAATG 59.771 50.000 0.81 0.00 31.34 2.32
1445 1521 4.883585 TCAACTCTGCACATGTTTCTCTTT 59.116 37.500 0.00 0.00 0.00 2.52
1446 1522 4.825546 ACTCTGCACATGTTTCTCTTTG 57.174 40.909 0.00 0.00 0.00 2.77
1500 1605 7.115378 GCAGACGAATTGAAATGAATGAAACTT 59.885 33.333 0.00 0.00 0.00 2.66
1512 1622 9.612066 AAATGAATGAAACTTAAATTGTGGTGT 57.388 25.926 0.00 0.00 0.00 4.16
1654 1764 2.045926 ATGACCTGCAACCTCGGC 60.046 61.111 0.00 0.00 0.00 5.54
1780 1890 3.138798 GGCCTGCTCATGTGGCTG 61.139 66.667 16.48 13.83 45.45 4.85
2119 2229 2.653448 CAGATCAGCTCCGCGTCG 60.653 66.667 4.92 0.00 0.00 5.12
2247 2357 1.725066 CCGCGTCCACAAACAAGTT 59.275 52.632 4.92 0.00 0.00 2.66
2253 2363 3.303132 GCGTCCACAAACAAGTTAGTCAG 60.303 47.826 0.00 0.00 0.00 3.51
2263 2373 4.850680 ACAAGTTAGTCAGAAACCAACCA 58.149 39.130 0.00 0.00 30.68 3.67
2304 2418 4.446385 CCTGCAACAACAAACATCATCTTG 59.554 41.667 0.00 0.00 0.00 3.02
2309 2423 5.266733 ACAACAAACATCATCTTGCAACT 57.733 34.783 0.00 0.00 0.00 3.16
2313 2427 6.246420 ACAAACATCATCTTGCAACTACTC 57.754 37.500 0.00 0.00 0.00 2.59
2340 2463 2.490509 TGCATTGCTCAGTCTCCAAATG 59.509 45.455 10.49 0.00 0.00 2.32
2348 2471 4.015084 CTCAGTCTCCAAATGAATGGCTT 58.985 43.478 0.00 0.00 40.46 4.35
2354 2477 9.288576 CAGTCTCCAAATGAATGGCTTATTATA 57.711 33.333 0.00 0.00 40.46 0.98
2420 2543 1.957186 GGTGTACGCGCTGGACAAA 60.957 57.895 16.84 0.00 0.00 2.83
2504 2627 3.991999 GGGTACAAGCCGGTTTCC 58.008 61.111 0.00 0.00 0.00 3.13
2536 2659 0.539051 GTGGACATGGACAGAGGGAG 59.461 60.000 0.00 0.00 0.00 4.30
2613 2736 1.488393 GCTCTTTGACCTATGGCCTCT 59.512 52.381 3.32 0.00 0.00 3.69
2675 2798 0.033504 TGGCAACAGAGGAAGACGAC 59.966 55.000 0.00 0.00 46.17 4.34
2680 2803 1.444553 CAGAGGAAGACGACGGCAC 60.445 63.158 2.19 0.00 0.00 5.01
2723 2846 2.234908 CCACCAAGACGAAGAATCCTCT 59.765 50.000 0.00 0.00 0.00 3.69
2728 2851 1.754226 AGACGAAGAATCCTCTCCTGC 59.246 52.381 0.00 0.00 0.00 4.85
2779 2902 0.882474 ACCACGACAGACTAGCAGTC 59.118 55.000 7.88 7.88 45.38 3.51
2806 2929 4.511082 AGGTTTTGCATTTTCAAATCGGTG 59.489 37.500 0.00 0.00 36.04 4.94
2852 2975 2.740981 CAACTCTGCATGACTGGAACTC 59.259 50.000 0.00 0.00 0.00 3.01
2858 2981 5.423015 TCTGCATGACTGGAACTCTTATTC 58.577 41.667 0.00 0.00 0.00 1.75
2859 2982 5.188555 TCTGCATGACTGGAACTCTTATTCT 59.811 40.000 0.00 0.00 0.00 2.40
2860 2983 5.423015 TGCATGACTGGAACTCTTATTCTC 58.577 41.667 0.00 0.00 0.00 2.87
2861 2984 4.505922 GCATGACTGGAACTCTTATTCTCG 59.494 45.833 0.00 0.00 0.00 4.04
2864 2987 5.710984 TGACTGGAACTCTTATTCTCGTTC 58.289 41.667 0.00 0.00 36.06 3.95
2913 3037 0.601046 CAGTCACGTGATGCACCTGT 60.601 55.000 23.12 0.00 0.00 4.00
2917 3041 1.016130 CACGTGATGCACCTGTCCTC 61.016 60.000 10.90 0.00 0.00 3.71
2959 3087 5.551233 TGTGAGTTCTGTAATCCTTTCCAG 58.449 41.667 0.00 0.00 0.00 3.86
2978 3106 4.865925 TCCAGAACGTTACACCATAAATCG 59.134 41.667 0.00 0.00 0.00 3.34
3021 3156 6.318648 TGCAGGGTTATGAATCTTATTGTGAC 59.681 38.462 0.00 0.00 0.00 3.67
3022 3157 6.238759 GCAGGGTTATGAATCTTATTGTGACC 60.239 42.308 0.00 0.00 0.00 4.02
3067 4127 1.304381 GATGTTGGCCCAGCTCCAA 60.304 57.895 0.00 1.30 40.98 3.53
3070 4130 1.676967 GTTGGCCCAGCTCCAAGAG 60.677 63.158 5.63 0.00 43.57 2.85
3090 4150 2.267324 GGTCTGGGAGCAGCTCAC 59.733 66.667 24.09 21.54 33.93 3.51
3113 4176 2.089201 TGAGACATGCAAGCCAAGATG 58.911 47.619 0.00 0.00 0.00 2.90
3121 4185 0.942962 CAAGCCAAGATGATCTCGGC 59.057 55.000 16.50 16.50 43.31 5.54
3126 4190 1.485397 CAAGATGATCTCGGCGTGAG 58.515 55.000 17.06 3.41 46.72 3.51
3140 4204 0.172578 CGTGAGATCGGTTAGGCACA 59.827 55.000 0.00 0.00 0.00 4.57
3170 4235 5.129815 ACTCTAGCTCTCGTCCCCTATATAG 59.870 48.000 2.46 2.46 0.00 1.31
3171 4236 3.007473 AGCTCTCGTCCCCTATATAGC 57.993 52.381 4.04 0.00 0.00 2.97
3172 4237 2.309162 AGCTCTCGTCCCCTATATAGCA 59.691 50.000 4.04 0.00 0.00 3.49
3173 4238 3.090037 GCTCTCGTCCCCTATATAGCAA 58.910 50.000 4.04 0.00 0.00 3.91
3174 4239 3.129638 GCTCTCGTCCCCTATATAGCAAG 59.870 52.174 4.04 0.00 0.00 4.01
3175 4240 3.090037 TCTCGTCCCCTATATAGCAAGC 58.910 50.000 4.04 0.00 0.00 4.01
3176 4241 2.166664 CTCGTCCCCTATATAGCAAGCC 59.833 54.545 4.04 0.00 0.00 4.35
3177 4242 2.180276 CGTCCCCTATATAGCAAGCCT 58.820 52.381 4.04 0.00 0.00 4.58
3178 4243 3.010920 TCGTCCCCTATATAGCAAGCCTA 59.989 47.826 4.04 0.00 0.00 3.93
3179 4244 3.381908 CGTCCCCTATATAGCAAGCCTAG 59.618 52.174 4.04 0.00 0.00 3.02
3180 4245 3.707102 GTCCCCTATATAGCAAGCCTAGG 59.293 52.174 3.67 3.67 0.00 3.02
3181 4246 3.041946 CCCCTATATAGCAAGCCTAGGG 58.958 54.545 11.72 14.76 45.57 3.53
3182 4247 3.041946 CCCTATATAGCAAGCCTAGGGG 58.958 54.545 11.72 0.00 43.30 4.79
3183 4248 3.569004 CCCTATATAGCAAGCCTAGGGGT 60.569 52.174 11.72 1.93 43.30 4.95
3184 4249 4.326690 CCCTATATAGCAAGCCTAGGGGTA 60.327 50.000 11.72 4.37 43.30 3.69
3185 4250 4.896482 CCTATATAGCAAGCCTAGGGGTAG 59.104 50.000 11.72 0.00 30.99 3.18
3186 4251 2.797285 ATAGCAAGCCTAGGGGTAGT 57.203 50.000 11.72 0.00 30.99 2.73
3187 4252 3.917324 ATAGCAAGCCTAGGGGTAGTA 57.083 47.619 11.72 0.00 30.99 1.82
3188 4253 2.797285 AGCAAGCCTAGGGGTAGTAT 57.203 50.000 11.72 0.00 30.99 2.12
3189 4254 3.061909 AGCAAGCCTAGGGGTAGTATT 57.938 47.619 11.72 0.00 30.99 1.89
3190 4255 2.973406 AGCAAGCCTAGGGGTAGTATTC 59.027 50.000 11.72 0.00 30.99 1.75
3191 4256 2.704065 GCAAGCCTAGGGGTAGTATTCA 59.296 50.000 11.72 0.00 30.99 2.57
3192 4257 3.494573 GCAAGCCTAGGGGTAGTATTCAC 60.495 52.174 11.72 0.00 30.99 3.18
3193 4258 3.967987 CAAGCCTAGGGGTAGTATTCACT 59.032 47.826 11.72 0.00 38.91 3.41
3194 4259 5.145564 CAAGCCTAGGGGTAGTATTCACTA 58.854 45.833 11.72 0.00 36.14 2.74
3195 4260 5.000570 AGCCTAGGGGTAGTATTCACTAG 57.999 47.826 11.72 6.03 37.94 2.57
3196 4261 4.668812 AGCCTAGGGGTAGTATTCACTAGA 59.331 45.833 11.72 0.00 37.94 2.43
3197 4262 5.011586 GCCTAGGGGTAGTATTCACTAGAG 58.988 50.000 11.72 0.00 37.94 2.43
3198 4263 5.011586 CCTAGGGGTAGTATTCACTAGAGC 58.988 50.000 0.00 0.00 37.94 4.09
3199 4264 4.537945 AGGGGTAGTATTCACTAGAGCA 57.462 45.455 0.00 0.00 37.94 4.26
3200 4265 5.081315 AGGGGTAGTATTCACTAGAGCAT 57.919 43.478 0.00 0.00 37.94 3.79
3201 4266 6.215515 AGGGGTAGTATTCACTAGAGCATA 57.784 41.667 0.00 0.00 37.94 3.14
3202 4267 6.011481 AGGGGTAGTATTCACTAGAGCATAC 58.989 44.000 0.00 0.00 37.94 2.39
3203 4268 6.011481 GGGGTAGTATTCACTAGAGCATACT 58.989 44.000 14.62 14.62 37.94 2.12
3204 4269 6.151480 GGGGTAGTATTCACTAGAGCATACTC 59.849 46.154 13.86 7.77 37.94 2.59
3215 4280 2.940147 GAGCATACTCTCGGTAGCATG 58.060 52.381 0.00 0.00 40.03 4.06
3216 4281 1.615883 AGCATACTCTCGGTAGCATGG 59.384 52.381 0.00 0.00 33.51 3.66
3217 4282 1.337260 GCATACTCTCGGTAGCATGGG 60.337 57.143 0.00 0.00 33.51 4.00
3218 4283 0.969894 ATACTCTCGGTAGCATGGGC 59.030 55.000 0.00 0.00 41.61 5.36
3235 4300 2.358322 GGCGGATCCCAGGATTTTAA 57.642 50.000 6.06 0.00 34.60 1.52
3236 4301 2.230660 GGCGGATCCCAGGATTTTAAG 58.769 52.381 6.06 0.00 34.60 1.85
3237 4302 2.158667 GGCGGATCCCAGGATTTTAAGA 60.159 50.000 6.06 0.00 34.60 2.10
3238 4303 3.142174 GCGGATCCCAGGATTTTAAGAG 58.858 50.000 6.06 0.00 34.60 2.85
3239 4304 3.433740 GCGGATCCCAGGATTTTAAGAGT 60.434 47.826 6.06 0.00 34.60 3.24
3240 4305 4.130118 CGGATCCCAGGATTTTAAGAGTG 58.870 47.826 6.06 0.00 34.60 3.51
3241 4306 4.384208 CGGATCCCAGGATTTTAAGAGTGT 60.384 45.833 6.06 0.00 34.60 3.55
3242 4307 4.884164 GGATCCCAGGATTTTAAGAGTGTG 59.116 45.833 0.00 0.00 34.60 3.82
3243 4308 4.993705 TCCCAGGATTTTAAGAGTGTGT 57.006 40.909 0.00 0.00 0.00 3.72
3244 4309 6.352737 GGATCCCAGGATTTTAAGAGTGTGTA 60.353 42.308 0.00 0.00 34.60 2.90
3245 4310 6.636454 TCCCAGGATTTTAAGAGTGTGTAT 57.364 37.500 0.00 0.00 0.00 2.29
3246 4311 7.027874 TCCCAGGATTTTAAGAGTGTGTATT 57.972 36.000 0.00 0.00 0.00 1.89
3247 4312 7.110155 TCCCAGGATTTTAAGAGTGTGTATTC 58.890 38.462 0.00 0.00 0.00 1.75
3248 4313 6.884295 CCCAGGATTTTAAGAGTGTGTATTCA 59.116 38.462 0.00 0.00 0.00 2.57
3249 4314 7.393234 CCCAGGATTTTAAGAGTGTGTATTCAA 59.607 37.037 0.00 0.00 0.00 2.69
3250 4315 8.792633 CCAGGATTTTAAGAGTGTGTATTCAAA 58.207 33.333 0.00 0.00 0.00 2.69
3261 4326 8.940952 AGAGTGTGTATTCAAAATCTTAAGAGC 58.059 33.333 11.53 0.00 33.14 4.09
3262 4327 8.854614 AGTGTGTATTCAAAATCTTAAGAGCT 57.145 30.769 11.53 0.00 0.00 4.09
3263 4328 9.289782 AGTGTGTATTCAAAATCTTAAGAGCTT 57.710 29.630 11.53 4.19 0.00 3.74
3292 4357 3.691049 TTCACAGCCTCTTGTTTTTCG 57.309 42.857 0.00 0.00 0.00 3.46
3293 4358 1.333619 TCACAGCCTCTTGTTTTTCGC 59.666 47.619 0.00 0.00 0.00 4.70
3294 4359 1.065401 CACAGCCTCTTGTTTTTCGCA 59.935 47.619 0.00 0.00 0.00 5.10
3295 4360 1.956477 ACAGCCTCTTGTTTTTCGCAT 59.044 42.857 0.00 0.00 0.00 4.73
3296 4361 2.287788 ACAGCCTCTTGTTTTTCGCATG 60.288 45.455 0.00 0.00 0.00 4.06
3297 4362 1.956477 AGCCTCTTGTTTTTCGCATGT 59.044 42.857 0.00 0.00 0.00 3.21
3298 4363 3.058293 CAGCCTCTTGTTTTTCGCATGTA 60.058 43.478 0.00 0.00 0.00 2.29
3299 4364 3.758554 AGCCTCTTGTTTTTCGCATGTAT 59.241 39.130 0.00 0.00 0.00 2.29
3300 4365 4.941263 AGCCTCTTGTTTTTCGCATGTATA 59.059 37.500 0.00 0.00 0.00 1.47
3301 4366 5.414454 AGCCTCTTGTTTTTCGCATGTATAA 59.586 36.000 0.00 0.00 0.00 0.98
3302 4367 6.072175 AGCCTCTTGTTTTTCGCATGTATAAA 60.072 34.615 0.00 0.00 0.00 1.40
3303 4368 6.751888 GCCTCTTGTTTTTCGCATGTATAAAT 59.248 34.615 0.00 0.00 0.00 1.40
3304 4369 7.253750 GCCTCTTGTTTTTCGCATGTATAAATG 60.254 37.037 0.00 0.00 0.00 2.32
3305 4370 7.967854 CCTCTTGTTTTTCGCATGTATAAATGA 59.032 33.333 7.11 0.00 0.00 2.57
3306 4371 9.340695 CTCTTGTTTTTCGCATGTATAAATGAA 57.659 29.630 7.11 0.00 0.00 2.57
3307 4372 9.853555 TCTTGTTTTTCGCATGTATAAATGAAT 57.146 25.926 7.11 0.00 0.00 2.57
3316 4381 9.495572 TCGCATGTATAAATGAATATAACACCA 57.504 29.630 7.11 0.00 0.00 4.17
3364 4429 6.793492 AAAGAGTGAAGTGCATTCTAGTTC 57.207 37.500 0.00 0.00 42.09 3.01
3365 4430 4.826556 AGAGTGAAGTGCATTCTAGTTCC 58.173 43.478 0.00 0.00 41.25 3.62
3366 4431 3.935828 GAGTGAAGTGCATTCTAGTTCCC 59.064 47.826 0.00 0.00 38.83 3.97
3367 4432 3.584848 AGTGAAGTGCATTCTAGTTCCCT 59.415 43.478 0.00 0.00 38.83 4.20
3368 4433 3.686726 GTGAAGTGCATTCTAGTTCCCTG 59.313 47.826 0.00 0.00 38.83 4.45
3369 4434 3.582647 TGAAGTGCATTCTAGTTCCCTGA 59.417 43.478 0.00 0.00 38.83 3.86
3370 4435 4.041567 TGAAGTGCATTCTAGTTCCCTGAA 59.958 41.667 0.00 0.00 38.83 3.02
3371 4436 4.640771 AGTGCATTCTAGTTCCCTGAAA 57.359 40.909 0.00 0.00 0.00 2.69
3372 4437 5.184892 AGTGCATTCTAGTTCCCTGAAAT 57.815 39.130 0.00 0.00 0.00 2.17
3373 4438 6.313519 AGTGCATTCTAGTTCCCTGAAATA 57.686 37.500 0.00 0.00 0.00 1.40
3374 4439 6.904626 AGTGCATTCTAGTTCCCTGAAATAT 58.095 36.000 0.00 0.00 0.00 1.28
3375 4440 7.349598 AGTGCATTCTAGTTCCCTGAAATATT 58.650 34.615 0.00 0.00 0.00 1.28
3376 4441 7.836183 AGTGCATTCTAGTTCCCTGAAATATTT 59.164 33.333 0.00 0.00 0.00 1.40
3377 4442 8.131731 GTGCATTCTAGTTCCCTGAAATATTTC 58.868 37.037 19.37 19.37 37.69 2.17
3378 4443 7.833682 TGCATTCTAGTTCCCTGAAATATTTCA 59.166 33.333 25.44 25.44 44.31 2.69
3390 4455 5.579047 TGAAATATTTCAGGGGTGTCATGT 58.421 37.500 23.86 0.00 41.88 3.21
3391 4456 6.726379 TGAAATATTTCAGGGGTGTCATGTA 58.274 36.000 23.86 0.00 41.88 2.29
3392 4457 6.828273 TGAAATATTTCAGGGGTGTCATGTAG 59.172 38.462 23.86 0.00 41.88 2.74
3393 4458 3.652057 ATTTCAGGGGTGTCATGTAGG 57.348 47.619 0.00 0.00 0.00 3.18
3394 4459 2.038863 TTCAGGGGTGTCATGTAGGT 57.961 50.000 0.00 0.00 0.00 3.08
3395 4460 1.568504 TCAGGGGTGTCATGTAGGTC 58.431 55.000 0.00 0.00 0.00 3.85
3396 4461 1.078823 TCAGGGGTGTCATGTAGGTCT 59.921 52.381 0.00 0.00 0.00 3.85
3397 4462 1.909302 CAGGGGTGTCATGTAGGTCTT 59.091 52.381 0.00 0.00 0.00 3.01
3398 4463 2.305927 CAGGGGTGTCATGTAGGTCTTT 59.694 50.000 0.00 0.00 0.00 2.52
3399 4464 3.517901 CAGGGGTGTCATGTAGGTCTTTA 59.482 47.826 0.00 0.00 0.00 1.85
3400 4465 4.019681 CAGGGGTGTCATGTAGGTCTTTAA 60.020 45.833 0.00 0.00 0.00 1.52
3401 4466 4.600111 AGGGGTGTCATGTAGGTCTTTAAA 59.400 41.667 0.00 0.00 0.00 1.52
3402 4467 4.698780 GGGGTGTCATGTAGGTCTTTAAAC 59.301 45.833 0.00 0.00 0.00 2.01
3403 4468 5.514310 GGGGTGTCATGTAGGTCTTTAAACT 60.514 44.000 0.00 0.00 0.00 2.66
3404 4469 6.296030 GGGGTGTCATGTAGGTCTTTAAACTA 60.296 42.308 0.00 0.00 0.00 2.24
3405 4470 7.336396 GGGTGTCATGTAGGTCTTTAAACTAT 58.664 38.462 0.00 0.00 0.00 2.12
3406 4471 7.280205 GGGTGTCATGTAGGTCTTTAAACTATG 59.720 40.741 0.00 0.00 0.00 2.23
3407 4472 8.038944 GGTGTCATGTAGGTCTTTAAACTATGA 58.961 37.037 0.00 0.00 0.00 2.15
3408 4473 9.431887 GTGTCATGTAGGTCTTTAAACTATGAA 57.568 33.333 0.00 0.00 0.00 2.57
3415 4480 9.989869 GTAGGTCTTTAAACTATGAAAATCTGC 57.010 33.333 0.00 0.00 0.00 4.26
3416 4481 8.635765 AGGTCTTTAAACTATGAAAATCTGCA 57.364 30.769 0.00 0.00 0.00 4.41
3417 4482 9.247861 AGGTCTTTAAACTATGAAAATCTGCAT 57.752 29.630 0.00 0.00 0.00 3.96
3418 4483 9.508567 GGTCTTTAAACTATGAAAATCTGCATC 57.491 33.333 0.00 0.00 0.00 3.91
3419 4484 9.508567 GTCTTTAAACTATGAAAATCTGCATCC 57.491 33.333 0.00 0.00 0.00 3.51
3420 4485 9.466497 TCTTTAAACTATGAAAATCTGCATCCT 57.534 29.630 0.00 0.00 0.00 3.24
3421 4486 9.512435 CTTTAAACTATGAAAATCTGCATCCTG 57.488 33.333 0.00 0.00 0.00 3.86
3422 4487 6.461110 AAACTATGAAAATCTGCATCCTGG 57.539 37.500 0.00 0.00 0.00 4.45
3423 4488 5.121380 ACTATGAAAATCTGCATCCTGGT 57.879 39.130 0.00 0.00 0.00 4.00
3424 4489 5.128919 ACTATGAAAATCTGCATCCTGGTC 58.871 41.667 0.00 0.00 0.00 4.02
3425 4490 2.726821 TGAAAATCTGCATCCTGGTCC 58.273 47.619 0.00 0.00 0.00 4.46
3426 4491 2.309755 TGAAAATCTGCATCCTGGTCCT 59.690 45.455 0.00 0.00 0.00 3.85
3427 4492 2.725221 AAATCTGCATCCTGGTCCTC 57.275 50.000 0.00 0.00 0.00 3.71
3428 4493 0.467384 AATCTGCATCCTGGTCCTCG 59.533 55.000 0.00 0.00 0.00 4.63
3429 4494 0.397675 ATCTGCATCCTGGTCCTCGA 60.398 55.000 0.00 0.00 0.00 4.04
3430 4495 0.614697 TCTGCATCCTGGTCCTCGAA 60.615 55.000 0.00 0.00 0.00 3.71
3431 4496 0.179089 CTGCATCCTGGTCCTCGAAG 60.179 60.000 0.00 0.00 0.00 3.79
3432 4497 0.904865 TGCATCCTGGTCCTCGAAGT 60.905 55.000 0.00 0.00 0.00 3.01
3433 4498 0.460987 GCATCCTGGTCCTCGAAGTG 60.461 60.000 0.00 0.00 0.00 3.16
3434 4499 0.460987 CATCCTGGTCCTCGAAGTGC 60.461 60.000 0.00 0.00 0.00 4.40
3435 4500 0.904865 ATCCTGGTCCTCGAAGTGCA 60.905 55.000 0.00 0.00 0.00 4.57
3436 4501 1.079543 CCTGGTCCTCGAAGTGCAG 60.080 63.158 0.00 0.00 0.00 4.41
3437 4502 1.668294 CTGGTCCTCGAAGTGCAGT 59.332 57.895 0.00 0.00 0.00 4.40
3438 4503 0.888619 CTGGTCCTCGAAGTGCAGTA 59.111 55.000 0.00 0.00 0.00 2.74
3439 4504 1.272490 CTGGTCCTCGAAGTGCAGTAA 59.728 52.381 0.00 0.00 0.00 2.24
3440 4505 1.272490 TGGTCCTCGAAGTGCAGTAAG 59.728 52.381 0.00 0.00 0.00 2.34
3441 4506 1.272769 GGTCCTCGAAGTGCAGTAAGT 59.727 52.381 0.00 0.00 0.00 2.24
3442 4507 2.329379 GTCCTCGAAGTGCAGTAAGTG 58.671 52.381 0.00 0.00 0.00 3.16
3443 4508 1.961394 TCCTCGAAGTGCAGTAAGTGT 59.039 47.619 0.00 0.00 0.00 3.55
3444 4509 2.061773 CCTCGAAGTGCAGTAAGTGTG 58.938 52.381 0.00 0.00 0.00 3.82
3445 4510 1.457303 CTCGAAGTGCAGTAAGTGTGC 59.543 52.381 0.00 0.00 41.59 4.57
3446 4511 0.512952 CGAAGTGCAGTAAGTGTGCC 59.487 55.000 0.00 0.00 40.43 5.01
3447 4512 1.593196 GAAGTGCAGTAAGTGTGCCA 58.407 50.000 0.00 0.00 40.43 4.92
3448 4513 2.154462 GAAGTGCAGTAAGTGTGCCAT 58.846 47.619 0.00 0.00 40.43 4.40
3449 4514 2.276732 AGTGCAGTAAGTGTGCCATT 57.723 45.000 0.00 0.00 40.43 3.16
3450 4515 2.154462 AGTGCAGTAAGTGTGCCATTC 58.846 47.619 0.00 0.00 40.43 2.67
3451 4516 1.879380 GTGCAGTAAGTGTGCCATTCA 59.121 47.619 0.00 0.00 40.43 2.57
3452 4517 2.095567 GTGCAGTAAGTGTGCCATTCAG 60.096 50.000 0.00 0.00 40.43 3.02
3453 4518 1.470098 GCAGTAAGTGTGCCATTCAGG 59.530 52.381 0.00 0.00 41.84 3.86
3466 4531 4.861102 CCATTCAGGCCCAAAATCTATC 57.139 45.455 0.00 0.00 0.00 2.08
3467 4532 4.477249 CCATTCAGGCCCAAAATCTATCT 58.523 43.478 0.00 0.00 0.00 1.98
3468 4533 4.280174 CCATTCAGGCCCAAAATCTATCTG 59.720 45.833 0.00 0.00 0.00 2.90
3469 4534 4.860802 TTCAGGCCCAAAATCTATCTGA 57.139 40.909 0.00 0.00 0.00 3.27
3470 4535 4.156455 TCAGGCCCAAAATCTATCTGAC 57.844 45.455 0.00 0.00 0.00 3.51
3471 4536 3.117888 TCAGGCCCAAAATCTATCTGACC 60.118 47.826 0.00 0.00 0.00 4.02
3472 4537 3.117738 CAGGCCCAAAATCTATCTGACCT 60.118 47.826 0.00 0.00 0.00 3.85
3473 4538 3.137360 AGGCCCAAAATCTATCTGACCTC 59.863 47.826 0.00 0.00 0.00 3.85
3474 4539 3.117888 GGCCCAAAATCTATCTGACCTCA 60.118 47.826 0.00 0.00 0.00 3.86
3475 4540 3.879892 GCCCAAAATCTATCTGACCTCAC 59.120 47.826 0.00 0.00 0.00 3.51
3476 4541 4.455606 CCCAAAATCTATCTGACCTCACC 58.544 47.826 0.00 0.00 0.00 4.02
3477 4542 4.164988 CCCAAAATCTATCTGACCTCACCT 59.835 45.833 0.00 0.00 0.00 4.00
3478 4543 5.121811 CCAAAATCTATCTGACCTCACCTG 58.878 45.833 0.00 0.00 0.00 4.00
3479 4544 5.104776 CCAAAATCTATCTGACCTCACCTGA 60.105 44.000 0.00 0.00 0.00 3.86
3480 4545 5.606348 AAATCTATCTGACCTCACCTGAC 57.394 43.478 0.00 0.00 0.00 3.51
3481 4546 3.019799 TCTATCTGACCTCACCTGACC 57.980 52.381 0.00 0.00 0.00 4.02
3482 4547 1.678627 CTATCTGACCTCACCTGACCG 59.321 57.143 0.00 0.00 0.00 4.79
3483 4548 0.972983 ATCTGACCTCACCTGACCGG 60.973 60.000 0.00 0.00 39.35 5.28
3484 4549 3.302347 CTGACCTCACCTGACCGGC 62.302 68.421 0.00 0.00 35.61 6.13
3485 4550 4.083862 GACCTCACCTGACCGGCC 62.084 72.222 0.00 0.00 35.61 6.13
3486 4551 4.954118 ACCTCACCTGACCGGCCA 62.954 66.667 0.00 0.00 35.61 5.36
3487 4552 4.087892 CCTCACCTGACCGGCCAG 62.088 72.222 11.38 11.38 35.61 4.85
3488 4553 4.767255 CTCACCTGACCGGCCAGC 62.767 72.222 13.04 0.00 35.61 4.85
3490 4555 3.390521 CACCTGACCGGCCAGCTA 61.391 66.667 13.04 0.00 35.61 3.32
3491 4556 3.391382 ACCTGACCGGCCAGCTAC 61.391 66.667 13.04 0.00 35.61 3.58
3492 4557 4.514577 CCTGACCGGCCAGCTACG 62.515 72.222 13.04 0.00 32.97 3.51
3499 4564 4.752879 GGCCAGCTACGCCGTTGA 62.753 66.667 8.17 0.00 36.47 3.18
3500 4565 3.488090 GCCAGCTACGCCGTTGAC 61.488 66.667 2.16 0.00 0.00 3.18
3501 4566 2.813908 CCAGCTACGCCGTTGACC 60.814 66.667 2.16 0.00 0.00 4.02
3502 4567 2.813908 CAGCTACGCCGTTGACCC 60.814 66.667 2.16 0.00 0.00 4.46
3503 4568 4.430765 AGCTACGCCGTTGACCCG 62.431 66.667 2.16 0.00 0.00 5.28
3504 4569 4.729856 GCTACGCCGTTGACCCGT 62.730 66.667 2.16 0.00 38.84 5.28
3505 4570 2.807895 CTACGCCGTTGACCCGTG 60.808 66.667 0.00 0.00 36.51 4.94
3509 4574 4.025401 GCCGTTGACCCGTGCTTG 62.025 66.667 0.00 0.00 0.00 4.01
3510 4575 2.590575 CCGTTGACCCGTGCTTGT 60.591 61.111 0.00 0.00 0.00 3.16
3511 4576 2.184167 CCGTTGACCCGTGCTTGTT 61.184 57.895 0.00 0.00 0.00 2.83
3512 4577 0.881159 CCGTTGACCCGTGCTTGTTA 60.881 55.000 0.00 0.00 0.00 2.41
3513 4578 0.511221 CGTTGACCCGTGCTTGTTAG 59.489 55.000 0.00 0.00 0.00 2.34
3514 4579 1.870580 CGTTGACCCGTGCTTGTTAGA 60.871 52.381 0.00 0.00 0.00 2.10
3515 4580 2.215196 GTTGACCCGTGCTTGTTAGAA 58.785 47.619 0.00 0.00 0.00 2.10
3516 4581 2.163818 TGACCCGTGCTTGTTAGAAG 57.836 50.000 0.00 0.00 0.00 2.85
3517 4582 1.270625 TGACCCGTGCTTGTTAGAAGG 60.271 52.381 0.00 0.00 0.00 3.46
3518 4583 0.036306 ACCCGTGCTTGTTAGAAGGG 59.964 55.000 0.00 0.00 42.82 3.95
3519 4584 0.676782 CCCGTGCTTGTTAGAAGGGG 60.677 60.000 0.00 0.00 46.32 4.79
3520 4585 0.676782 CCGTGCTTGTTAGAAGGGGG 60.677 60.000 0.00 0.00 32.18 5.40
3521 4586 1.305930 CGTGCTTGTTAGAAGGGGGC 61.306 60.000 0.00 0.00 0.00 5.80
3522 4587 0.965866 GTGCTTGTTAGAAGGGGGCC 60.966 60.000 0.00 0.00 0.00 5.80
3523 4588 1.379977 GCTTGTTAGAAGGGGGCCC 60.380 63.158 15.76 15.76 0.00 5.80
3532 4597 4.620673 AGGGGGCCCTCAATGTAA 57.379 55.556 27.77 0.00 44.43 2.41
3533 4598 2.007576 AGGGGGCCCTCAATGTAAC 58.992 57.895 27.77 1.59 44.43 2.50
3534 4599 1.453197 GGGGGCCCTCAATGTAACG 60.453 63.158 24.38 0.00 0.00 3.18
3535 4600 1.605453 GGGGCCCTCAATGTAACGA 59.395 57.895 24.38 0.00 0.00 3.85
3536 4601 0.746923 GGGGCCCTCAATGTAACGAC 60.747 60.000 24.38 0.00 0.00 4.34
3537 4602 0.252197 GGGCCCTCAATGTAACGACT 59.748 55.000 17.04 0.00 0.00 4.18
3538 4603 1.653151 GGCCCTCAATGTAACGACTC 58.347 55.000 0.00 0.00 0.00 3.36
3539 4604 1.066430 GGCCCTCAATGTAACGACTCA 60.066 52.381 0.00 0.00 0.00 3.41
3540 4605 2.420129 GGCCCTCAATGTAACGACTCAT 60.420 50.000 0.00 0.00 0.00 2.90
3541 4606 2.609459 GCCCTCAATGTAACGACTCATG 59.391 50.000 0.00 0.00 0.00 3.07
3542 4607 3.678806 GCCCTCAATGTAACGACTCATGA 60.679 47.826 0.00 0.00 0.00 3.07
3543 4608 3.865745 CCCTCAATGTAACGACTCATGAC 59.134 47.826 0.00 0.00 0.00 3.06
3544 4609 3.547868 CCTCAATGTAACGACTCATGACG 59.452 47.826 4.33 4.33 37.38 4.35
3545 4610 4.412207 CTCAATGTAACGACTCATGACGA 58.588 43.478 12.18 0.00 35.52 4.20
3546 4611 4.800784 TCAATGTAACGACTCATGACGAA 58.199 39.130 12.18 0.00 35.52 3.85
3547 4612 5.224135 TCAATGTAACGACTCATGACGAAA 58.776 37.500 12.18 0.00 35.52 3.46
3548 4613 5.692654 TCAATGTAACGACTCATGACGAAAA 59.307 36.000 12.18 0.00 35.52 2.29
3549 4614 6.367695 TCAATGTAACGACTCATGACGAAAAT 59.632 34.615 12.18 0.00 35.52 1.82
3550 4615 7.542824 TCAATGTAACGACTCATGACGAAAATA 59.457 33.333 12.18 0.00 35.52 1.40
3551 4616 8.328146 CAATGTAACGACTCATGACGAAAATAT 58.672 33.333 12.18 0.00 35.52 1.28
3552 4617 7.216920 TGTAACGACTCATGACGAAAATATG 57.783 36.000 12.18 0.00 35.52 1.78
3553 4618 4.778842 ACGACTCATGACGAAAATATGC 57.221 40.909 12.18 0.00 35.52 3.14
3554 4619 4.180817 ACGACTCATGACGAAAATATGCA 58.819 39.130 12.18 0.00 35.52 3.96
3555 4620 4.629634 ACGACTCATGACGAAAATATGCAA 59.370 37.500 12.18 0.00 35.52 4.08
3556 4621 5.121611 ACGACTCATGACGAAAATATGCAAA 59.878 36.000 12.18 0.00 35.52 3.68
3557 4622 6.183360 ACGACTCATGACGAAAATATGCAAAT 60.183 34.615 12.18 0.00 35.52 2.32
3558 4623 7.011016 ACGACTCATGACGAAAATATGCAAATA 59.989 33.333 12.18 0.00 35.52 1.40
3559 4624 7.850492 CGACTCATGACGAAAATATGCAAATAA 59.150 33.333 0.00 0.00 33.54 1.40
3560 4625 9.502145 GACTCATGACGAAAATATGCAAATAAA 57.498 29.630 0.00 0.00 0.00 1.40
3589 4654 9.784680 CAAATTCATGGTTTCAAAAATTGTTCA 57.215 25.926 0.00 0.00 0.00 3.18
3591 4656 9.953697 AATTCATGGTTTCAAAAATTGTTCATG 57.046 25.926 0.00 0.00 0.00 3.07
3592 4657 8.728337 TTCATGGTTTCAAAAATTGTTCATGA 57.272 26.923 5.85 5.85 34.99 3.07
3593 4658 8.728337 TCATGGTTTCAAAAATTGTTCATGAA 57.272 26.923 3.38 3.38 34.50 2.57
3594 4659 9.339850 TCATGGTTTCAAAAATTGTTCATGAAT 57.660 25.926 12.12 0.00 34.50 2.57
3609 4674 8.592529 TGTTCATGAATATGGGAAAATCTTCA 57.407 30.769 12.12 0.00 34.97 3.02
3610 4675 8.469200 TGTTCATGAATATGGGAAAATCTTCAC 58.531 33.333 12.12 0.00 35.33 3.18
3611 4676 7.263100 TCATGAATATGGGAAAATCTTCACG 57.737 36.000 0.00 0.00 37.84 4.35
3612 4677 7.053498 TCATGAATATGGGAAAATCTTCACGA 58.947 34.615 0.00 0.00 37.84 4.35
3613 4678 6.677781 TGAATATGGGAAAATCTTCACGAC 57.322 37.500 0.00 0.00 37.84 4.34
3614 4679 6.414732 TGAATATGGGAAAATCTTCACGACT 58.585 36.000 0.00 0.00 37.84 4.18
3615 4680 6.884295 TGAATATGGGAAAATCTTCACGACTT 59.116 34.615 0.00 0.00 37.84 3.01
3616 4681 7.393234 TGAATATGGGAAAATCTTCACGACTTT 59.607 33.333 0.00 0.00 37.84 2.66
3617 4682 8.801882 AATATGGGAAAATCTTCACGACTTTA 57.198 30.769 0.00 0.00 37.84 1.85
3618 4683 8.801882 ATATGGGAAAATCTTCACGACTTTAA 57.198 30.769 0.00 0.00 37.84 1.52
3619 4684 7.703058 ATGGGAAAATCTTCACGACTTTAAT 57.297 32.000 0.00 0.00 37.84 1.40
3620 4685 8.801882 ATGGGAAAATCTTCACGACTTTAATA 57.198 30.769 0.00 0.00 37.84 0.98
3621 4686 8.624367 TGGGAAAATCTTCACGACTTTAATAA 57.376 30.769 0.00 0.00 37.84 1.40
3622 4687 9.238368 TGGGAAAATCTTCACGACTTTAATAAT 57.762 29.630 0.00 0.00 37.84 1.28
3668 4733 9.896263 AATGTTTGAATATGGAAAAACAATTGC 57.104 25.926 5.05 0.00 43.49 3.56
3669 4734 7.571026 TGTTTGAATATGGAAAAACAATTGCG 58.429 30.769 5.05 0.00 39.02 4.85
3670 4735 7.439356 TGTTTGAATATGGAAAAACAATTGCGA 59.561 29.630 5.05 0.00 39.02 5.10
3671 4736 6.942886 TGAATATGGAAAAACAATTGCGAC 57.057 33.333 5.05 0.00 0.00 5.19
3672 4737 6.686630 TGAATATGGAAAAACAATTGCGACT 58.313 32.000 5.05 0.00 0.00 4.18
3673 4738 7.151308 TGAATATGGAAAAACAATTGCGACTT 58.849 30.769 5.05 0.00 0.00 3.01
3674 4739 7.655328 TGAATATGGAAAAACAATTGCGACTTT 59.345 29.630 5.05 0.00 0.00 2.66
3675 4740 9.134734 GAATATGGAAAAACAATTGCGACTTTA 57.865 29.630 5.05 0.00 0.00 1.85
3676 4741 9.482627 AATATGGAAAAACAATTGCGACTTTAA 57.517 25.926 5.05 0.00 0.00 1.52
3677 4742 7.778470 ATGGAAAAACAATTGCGACTTTAAA 57.222 28.000 5.05 0.00 0.00 1.52
3678 4743 7.596749 TGGAAAAACAATTGCGACTTTAAAA 57.403 28.000 5.05 0.00 0.00 1.52
3679 4744 8.029642 TGGAAAAACAATTGCGACTTTAAAAA 57.970 26.923 5.05 0.00 0.00 1.94
3729 4794 6.826893 AAAGTTCACGAACAATGAATTTGG 57.173 33.333 12.21 0.00 43.47 3.28
3730 4795 5.766150 AGTTCACGAACAATGAATTTGGA 57.234 34.783 12.21 0.00 43.47 3.53
3731 4796 6.142818 AGTTCACGAACAATGAATTTGGAA 57.857 33.333 12.21 0.00 43.47 3.53
3732 4797 6.208644 AGTTCACGAACAATGAATTTGGAAG 58.791 36.000 12.21 0.00 43.47 3.46
3733 4798 6.039270 AGTTCACGAACAATGAATTTGGAAGA 59.961 34.615 12.21 0.00 43.47 2.87
3734 4799 6.000891 TCACGAACAATGAATTTGGAAGAG 57.999 37.500 0.00 0.00 39.80 2.85
3735 4800 5.762711 TCACGAACAATGAATTTGGAAGAGA 59.237 36.000 0.00 0.00 39.80 3.10
3736 4801 6.262049 TCACGAACAATGAATTTGGAAGAGAA 59.738 34.615 0.00 0.00 39.80 2.87
3737 4802 6.917477 CACGAACAATGAATTTGGAAGAGAAA 59.083 34.615 0.00 0.00 39.80 2.52
3738 4803 7.434897 CACGAACAATGAATTTGGAAGAGAAAA 59.565 33.333 0.00 0.00 39.80 2.29
3739 4804 7.978975 ACGAACAATGAATTTGGAAGAGAAAAA 59.021 29.630 0.00 0.00 39.80 1.94
3758 4823 5.427036 AAAAATGTTCGCGACCTTAAGAA 57.573 34.783 9.15 0.00 0.00 2.52
3759 4824 5.622770 AAAATGTTCGCGACCTTAAGAAT 57.377 34.783 9.15 0.00 0.00 2.40
3760 4825 5.622770 AAATGTTCGCGACCTTAAGAATT 57.377 34.783 9.15 0.00 0.00 2.17
3761 4826 5.622770 AATGTTCGCGACCTTAAGAATTT 57.377 34.783 9.15 0.00 0.00 1.82
3762 4827 5.622770 ATGTTCGCGACCTTAAGAATTTT 57.377 34.783 9.15 0.00 0.00 1.82
3763 4828 5.427036 TGTTCGCGACCTTAAGAATTTTT 57.573 34.783 9.15 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 6.940298 GCTAACATTATCCCAACTTGCCTATA 59.060 38.462 0.00 0.00 0.00 1.31
113 115 5.765072 TGGTTTGCGTAAAAACAAGAAAC 57.235 34.783 0.00 0.00 42.56 2.78
265 275 2.234300 TTTCTCACGGCGAGTTCTTT 57.766 45.000 16.62 0.00 42.88 2.52
275 285 3.251479 TCACCATCAGATTTCTCACGG 57.749 47.619 0.00 0.00 0.00 4.94
313 324 6.704310 AGCCATAACTTTTGATTCAAGCATT 58.296 32.000 0.00 0.00 0.00 3.56
387 401 2.172505 ACATGGCTACCGATGGAATCAA 59.827 45.455 0.00 0.00 45.97 2.57
415 430 4.934356 AGAAATTGTTTAGCCATCTCCCA 58.066 39.130 0.00 0.00 0.00 4.37
451 467 7.870509 AAGTATATGTCCGTGTGTCTAGTTA 57.129 36.000 0.00 0.00 0.00 2.24
488 504 0.956633 TTCGTTGTCTGGAGCGTACT 59.043 50.000 0.00 0.00 0.00 2.73
491 507 2.165641 TCATATTCGTTGTCTGGAGCGT 59.834 45.455 0.00 0.00 0.00 5.07
509 525 7.500227 GCACCAAGCCATATGTATACATATCAT 59.500 37.037 28.07 17.23 45.08 2.45
510 526 6.823182 GCACCAAGCCATATGTATACATATCA 59.177 38.462 28.07 11.49 45.08 2.15
511 527 6.823182 TGCACCAAGCCATATGTATACATATC 59.177 38.462 28.07 20.20 42.82 1.63
512 528 6.720309 TGCACCAAGCCATATGTATACATAT 58.280 36.000 26.10 26.10 44.11 1.78
513 529 6.120507 TGCACCAAGCCATATGTATACATA 57.879 37.500 24.22 24.22 44.83 2.29
514 530 4.984295 TGCACCAAGCCATATGTATACAT 58.016 39.130 21.57 21.57 44.83 2.29
515 531 4.429854 TGCACCAAGCCATATGTATACA 57.570 40.909 8.27 8.27 44.83 2.29
516 532 5.335897 CCATTGCACCAAGCCATATGTATAC 60.336 44.000 1.24 0.00 44.83 1.47
517 533 4.766373 CCATTGCACCAAGCCATATGTATA 59.234 41.667 1.24 0.00 44.83 1.47
518 534 3.575256 CCATTGCACCAAGCCATATGTAT 59.425 43.478 1.24 0.00 44.83 2.29
519 535 2.957680 CCATTGCACCAAGCCATATGTA 59.042 45.455 1.24 0.00 44.83 2.29
520 536 1.758280 CCATTGCACCAAGCCATATGT 59.242 47.619 1.24 0.00 44.83 2.29
521 537 1.758280 ACCATTGCACCAAGCCATATG 59.242 47.619 0.00 0.00 44.83 1.78
522 538 1.758280 CACCATTGCACCAAGCCATAT 59.242 47.619 0.00 0.00 44.83 1.78
523 539 1.184431 CACCATTGCACCAAGCCATA 58.816 50.000 0.00 0.00 44.83 2.74
524 540 1.976898 CACCATTGCACCAAGCCAT 59.023 52.632 0.00 0.00 44.83 4.40
535 551 3.556817 TGGTAGCAGAGCACCATTG 57.443 52.632 8.52 0.00 35.82 2.82
541 557 0.319555 GACAACGTGGTAGCAGAGCA 60.320 55.000 0.00 0.00 0.00 4.26
575 591 7.277539 TGCTAAACCAAAATTGTGAACAAGAAG 59.722 33.333 0.00 0.00 39.47 2.85
576 592 7.099764 TGCTAAACCAAAATTGTGAACAAGAA 58.900 30.769 0.00 0.00 39.47 2.52
577 593 6.634805 TGCTAAACCAAAATTGTGAACAAGA 58.365 32.000 0.00 0.00 39.47 3.02
617 633 8.995220 CATTCAAGTGAATTTTGAATCCAACAT 58.005 29.630 11.82 0.00 46.76 2.71
632 648 7.382110 TCTTTGTCCAAAAACATTCAAGTGAA 58.618 30.769 0.00 0.00 38.56 3.18
633 649 6.929625 TCTTTGTCCAAAAACATTCAAGTGA 58.070 32.000 0.00 0.00 0.00 3.41
634 650 7.593875 TTCTTTGTCCAAAAACATTCAAGTG 57.406 32.000 0.00 0.00 0.00 3.16
635 651 7.148423 GCTTTCTTTGTCCAAAAACATTCAAGT 60.148 33.333 0.00 0.00 0.00 3.16
636 652 7.064966 AGCTTTCTTTGTCCAAAAACATTCAAG 59.935 33.333 0.00 0.00 0.00 3.02
638 654 6.313411 CAGCTTTCTTTGTCCAAAAACATTCA 59.687 34.615 0.00 0.00 0.00 2.57
643 664 6.720012 TTTCAGCTTTCTTTGTCCAAAAAC 57.280 33.333 0.00 0.00 0.00 2.43
739 763 3.122948 CACGTATATTCGGTATGCAAGGC 59.877 47.826 6.69 0.00 34.94 4.35
759 788 3.739300 CACGTTCCGTCCAATATATCCAC 59.261 47.826 0.00 0.00 38.32 4.02
773 802 1.994507 TTTGGTGGTTGCACGTTCCG 61.995 55.000 0.00 0.00 0.00 4.30
797 826 5.123979 GGGTGTGGATATTCAAGTCAAGAAC 59.876 44.000 0.00 0.00 0.00 3.01
816 845 1.153524 ATGCCATGTGTGTGGGTGT 59.846 52.632 0.00 0.00 39.73 4.16
834 870 4.423913 AGCTGAGCTGGAGATATAATCCA 58.576 43.478 5.97 8.48 44.63 3.41
868 919 2.046314 AAGCGACATTGACCCCGG 60.046 61.111 0.00 0.00 0.00 5.73
919 976 0.108898 CTCTCGTCCCTTGTCTGCTG 60.109 60.000 0.00 0.00 0.00 4.41
987 1044 3.222855 CTCATCTCTCCGCCGCCT 61.223 66.667 0.00 0.00 0.00 5.52
998 1055 3.222855 CCTCCGCCTCGCTCATCT 61.223 66.667 0.00 0.00 0.00 2.90
1341 1407 1.823899 CCCTCCATTTGGCGGTAGC 60.824 63.158 4.97 0.00 38.40 3.58
1347 1413 2.755952 ATAACCTCCCTCCATTTGGC 57.244 50.000 0.00 0.00 34.44 4.52
1388 1454 7.550196 GGTCATGGCAGTTTAATTTCATTCATT 59.450 33.333 0.00 0.00 0.00 2.57
1389 1455 7.043565 GGTCATGGCAGTTTAATTTCATTCAT 58.956 34.615 0.00 0.00 0.00 2.57
1390 1456 6.397272 GGTCATGGCAGTTTAATTTCATTCA 58.603 36.000 0.00 0.00 0.00 2.57
1391 1457 5.516339 CGGTCATGGCAGTTTAATTTCATTC 59.484 40.000 0.00 0.00 0.00 2.67
1445 1521 2.047370 TCGCAATTCGCAGCTCCA 60.047 55.556 0.00 0.00 42.60 3.86
1446 1522 2.401195 GTCGCAATTCGCAGCTCC 59.599 61.111 0.00 0.00 42.60 4.70
1468 1544 3.864686 CAATTCGTCTGCCGGCGG 61.865 66.667 30.18 30.18 37.11 6.13
1488 1593 7.171337 GCACACCACAATTTAAGTTTCATTCAT 59.829 33.333 0.00 0.00 0.00 2.57
1500 1605 2.230992 GCCATCTGCACACCACAATTTA 59.769 45.455 0.00 0.00 40.77 1.40
1503 1608 1.252904 GGCCATCTGCACACCACAAT 61.253 55.000 0.00 0.00 43.89 2.71
1621 1731 2.437359 ATCTGCAGCCAGCCGAAC 60.437 61.111 9.47 0.00 44.83 3.95
1694 1804 2.654877 GACGCCGAGGAAGGTGAA 59.345 61.111 3.39 0.00 44.18 3.18
1768 1878 3.873883 GCGAGCAGCCACATGAGC 61.874 66.667 0.00 1.38 40.81 4.26
2247 2357 5.768164 GGAAGAAATGGTTGGTTTCTGACTA 59.232 40.000 2.27 0.00 43.19 2.59
2253 2363 2.969262 TGGGGAAGAAATGGTTGGTTTC 59.031 45.455 0.00 0.00 36.15 2.78
2263 2373 3.708121 GCAGGATTGATTGGGGAAGAAAT 59.292 43.478 0.00 0.00 0.00 2.17
2304 2418 4.095483 AGCAATGCAATGTAGAGTAGTTGC 59.905 41.667 8.35 4.45 45.27 4.17
2309 2423 5.089970 ACTGAGCAATGCAATGTAGAGTA 57.910 39.130 8.35 0.00 0.00 2.59
2313 2427 3.311871 GGAGACTGAGCAATGCAATGTAG 59.688 47.826 8.35 2.86 0.00 2.74
2348 2471 4.769688 CGAAGATGGGGCTGCATATAATA 58.230 43.478 0.50 0.00 0.00 0.98
2354 2477 2.517875 GCGAAGATGGGGCTGCAT 60.518 61.111 0.50 0.00 0.00 3.96
2363 2486 1.543941 GCACGATCTCCGCGAAGATG 61.544 60.000 14.31 7.90 43.32 2.90
2420 2543 0.732880 CGAACACCGACTCGAAGCAT 60.733 55.000 0.00 0.00 41.76 3.79
2501 2624 2.359602 ACGCTCGACTCGGAGGAA 60.360 61.111 10.23 0.00 34.56 3.36
2504 2627 3.125573 TCCACGCTCGACTCGGAG 61.126 66.667 2.83 2.83 37.11 4.63
2613 2736 0.322322 CGGGGGTAAGTGCAGTACAA 59.678 55.000 9.17 0.00 0.00 2.41
2661 2784 1.901948 TGCCGTCGTCTTCCTCTGT 60.902 57.895 0.00 0.00 0.00 3.41
2680 2803 1.136252 CACGAACCGCACTTGATTCAG 60.136 52.381 0.00 0.00 0.00 3.02
2723 2846 1.681076 GGTTAAGGAACCGGCAGGA 59.319 57.895 10.86 0.00 45.73 3.86
2779 2902 6.128849 CCGATTTGAAAATGCAAAACCTGTAG 60.129 38.462 0.00 0.00 40.72 2.74
2806 2929 0.249996 TGGTCCTTTTCGAACCCGAC 60.250 55.000 0.00 3.22 45.50 4.79
2877 3001 8.376203 CACGTGACTGAATTACTTCTATCTTTG 58.624 37.037 10.90 0.00 32.29 2.77
2879 3003 7.827701 TCACGTGACTGAATTACTTCTATCTT 58.172 34.615 15.76 0.00 32.29 2.40
2913 3037 3.593328 ACCCAGATGAATTTTGAGGAGGA 59.407 43.478 0.00 0.00 0.00 3.71
2917 3041 4.523943 TCACAACCCAGATGAATTTTGAGG 59.476 41.667 0.00 0.00 0.00 3.86
2959 3087 3.619929 AGCCGATTTATGGTGTAACGTTC 59.380 43.478 2.82 0.00 38.12 3.95
3021 3156 0.957395 AACATCGAAGCTGGTGCAGG 60.957 55.000 0.00 0.00 42.74 4.85
3022 3157 0.877071 AAACATCGAAGCTGGTGCAG 59.123 50.000 0.00 0.00 42.74 4.41
3028 3163 2.096496 CAGGCCTTAAACATCGAAGCTG 59.904 50.000 0.00 0.00 0.00 4.24
3067 4127 4.704103 TGCTCCCAGACCGCCTCT 62.704 66.667 0.00 0.00 0.00 3.69
3081 4141 0.975135 ATGTCTCACTGTGAGCTGCT 59.025 50.000 28.56 0.00 43.95 4.24
3090 4150 1.199327 CTTGGCTTGCATGTCTCACTG 59.801 52.381 5.73 0.00 0.00 3.66
3097 4157 2.950309 GAGATCATCTTGGCTTGCATGT 59.050 45.455 0.00 0.00 0.00 3.21
3121 4185 0.172578 TGTGCCTAACCGATCTCACG 59.827 55.000 0.00 0.00 0.00 4.35
3126 4190 4.189231 AGTTTACATGTGCCTAACCGATC 58.811 43.478 9.11 0.00 0.00 3.69
3140 4204 3.633065 GGGACGAGAGCTAGAGTTTACAT 59.367 47.826 0.00 0.00 0.00 2.29
3170 4235 2.704065 TGAATACTACCCCTAGGCTTGC 59.296 50.000 2.05 0.00 36.11 4.01
3171 4236 3.967987 AGTGAATACTACCCCTAGGCTTG 59.032 47.826 2.05 0.00 34.74 4.01
3172 4237 4.282292 AGTGAATACTACCCCTAGGCTT 57.718 45.455 2.05 0.00 34.74 4.35
3173 4238 3.995691 AGTGAATACTACCCCTAGGCT 57.004 47.619 2.05 0.00 34.74 4.58
3174 4239 4.995536 TCTAGTGAATACTACCCCTAGGC 58.004 47.826 2.05 0.00 38.36 3.93
3175 4240 5.011586 GCTCTAGTGAATACTACCCCTAGG 58.988 50.000 0.06 0.06 38.36 3.02
3176 4241 5.632118 TGCTCTAGTGAATACTACCCCTAG 58.368 45.833 0.00 0.00 38.36 3.02
3177 4242 5.658198 TGCTCTAGTGAATACTACCCCTA 57.342 43.478 0.00 0.00 38.36 3.53
3178 4243 4.537945 TGCTCTAGTGAATACTACCCCT 57.462 45.455 0.00 0.00 38.36 4.79
3179 4244 6.011481 AGTATGCTCTAGTGAATACTACCCC 58.989 44.000 19.65 0.00 38.36 4.95
3180 4245 7.148355 GAGTATGCTCTAGTGAATACTACCC 57.852 44.000 20.65 9.02 36.28 3.69
3195 4260 2.352225 CCATGCTACCGAGAGTATGCTC 60.352 54.545 2.03 2.03 37.99 4.26
3196 4261 1.615883 CCATGCTACCGAGAGTATGCT 59.384 52.381 8.45 0.00 37.99 3.79
3197 4262 1.337260 CCCATGCTACCGAGAGTATGC 60.337 57.143 8.45 0.00 37.99 3.14
3198 4263 1.337260 GCCCATGCTACCGAGAGTATG 60.337 57.143 7.37 7.37 38.76 2.39
3199 4264 0.969894 GCCCATGCTACCGAGAGTAT 59.030 55.000 0.00 0.00 33.53 2.12
3200 4265 1.452953 CGCCCATGCTACCGAGAGTA 61.453 60.000 0.00 0.00 34.43 2.59
3201 4266 2.786495 CGCCCATGCTACCGAGAGT 61.786 63.158 0.00 0.00 34.43 3.24
3202 4267 2.028190 CGCCCATGCTACCGAGAG 59.972 66.667 0.00 0.00 34.43 3.20
3203 4268 3.536917 CCGCCCATGCTACCGAGA 61.537 66.667 0.00 0.00 34.43 4.04
3204 4269 2.771763 GATCCGCCCATGCTACCGAG 62.772 65.000 0.00 0.00 34.43 4.63
3205 4270 2.842462 ATCCGCCCATGCTACCGA 60.842 61.111 0.00 0.00 34.43 4.69
3206 4271 2.357517 GATCCGCCCATGCTACCG 60.358 66.667 0.00 0.00 34.43 4.02
3207 4272 2.032681 GGATCCGCCCATGCTACC 59.967 66.667 0.00 0.00 34.43 3.18
3216 4281 2.158667 TCTTAAAATCCTGGGATCCGCC 60.159 50.000 5.45 0.00 33.08 6.13
3217 4282 3.142174 CTCTTAAAATCCTGGGATCCGC 58.858 50.000 5.45 0.00 33.08 5.54
3218 4283 4.130118 CACTCTTAAAATCCTGGGATCCG 58.870 47.826 5.45 0.00 33.08 4.18
3219 4284 4.884164 CACACTCTTAAAATCCTGGGATCC 59.116 45.833 1.92 1.92 33.08 3.36
3220 4285 5.501156 ACACACTCTTAAAATCCTGGGATC 58.499 41.667 2.31 0.00 33.08 3.36
3221 4286 5.520748 ACACACTCTTAAAATCCTGGGAT 57.479 39.130 0.00 0.00 36.23 3.85
3222 4287 4.993705 ACACACTCTTAAAATCCTGGGA 57.006 40.909 0.00 0.00 0.00 4.37
3223 4288 6.884295 TGAATACACACTCTTAAAATCCTGGG 59.116 38.462 0.00 0.00 0.00 4.45
3224 4289 7.921786 TGAATACACACTCTTAAAATCCTGG 57.078 36.000 0.00 0.00 0.00 4.45
3235 4300 8.940952 GCTCTTAAGATTTTGAATACACACTCT 58.059 33.333 5.44 0.00 0.00 3.24
3236 4301 8.940952 AGCTCTTAAGATTTTGAATACACACTC 58.059 33.333 5.44 0.00 0.00 3.51
3237 4302 8.854614 AGCTCTTAAGATTTTGAATACACACT 57.145 30.769 5.44 0.00 0.00 3.55
3269 4334 4.862018 CGAAAAACAAGAGGCTGTGAAAAA 59.138 37.500 0.00 0.00 0.00 1.94
3270 4335 4.420168 CGAAAAACAAGAGGCTGTGAAAA 58.580 39.130 0.00 0.00 0.00 2.29
3271 4336 3.733684 GCGAAAAACAAGAGGCTGTGAAA 60.734 43.478 0.00 0.00 0.00 2.69
3272 4337 2.223479 GCGAAAAACAAGAGGCTGTGAA 60.223 45.455 0.00 0.00 0.00 3.18
3273 4338 1.333619 GCGAAAAACAAGAGGCTGTGA 59.666 47.619 0.00 0.00 0.00 3.58
3274 4339 1.065401 TGCGAAAAACAAGAGGCTGTG 59.935 47.619 0.00 0.00 0.00 3.66
3275 4340 1.388547 TGCGAAAAACAAGAGGCTGT 58.611 45.000 0.00 0.00 0.00 4.40
3276 4341 2.287788 ACATGCGAAAAACAAGAGGCTG 60.288 45.455 0.00 0.00 0.00 4.85
3277 4342 1.956477 ACATGCGAAAAACAAGAGGCT 59.044 42.857 0.00 0.00 0.00 4.58
3278 4343 2.422276 ACATGCGAAAAACAAGAGGC 57.578 45.000 0.00 0.00 0.00 4.70
3279 4344 7.967854 TCATTTATACATGCGAAAAACAAGAGG 59.032 33.333 0.00 0.00 0.00 3.69
3280 4345 8.894409 TCATTTATACATGCGAAAAACAAGAG 57.106 30.769 0.00 0.00 0.00 2.85
3281 4346 9.853555 ATTCATTTATACATGCGAAAAACAAGA 57.146 25.926 0.00 0.00 0.00 3.02
3290 4355 9.495572 TGGTGTTATATTCATTTATACATGCGA 57.504 29.630 0.00 0.00 0.00 5.10
3338 4403 9.587772 GAACTAGAATGCACTTCACTCTTTATA 57.412 33.333 0.00 0.00 32.85 0.98
3339 4404 7.550906 GGAACTAGAATGCACTTCACTCTTTAT 59.449 37.037 0.00 0.00 32.85 1.40
3340 4405 6.874134 GGAACTAGAATGCACTTCACTCTTTA 59.126 38.462 0.00 0.00 32.85 1.85
3341 4406 5.703130 GGAACTAGAATGCACTTCACTCTTT 59.297 40.000 0.00 0.00 32.85 2.52
3342 4407 5.241662 GGAACTAGAATGCACTTCACTCTT 58.758 41.667 0.00 0.00 32.85 2.85
3343 4408 4.323104 GGGAACTAGAATGCACTTCACTCT 60.323 45.833 0.00 0.40 35.22 3.24
3344 4409 3.935828 GGGAACTAGAATGCACTTCACTC 59.064 47.826 0.00 3.18 36.24 3.51
3345 4410 3.584848 AGGGAACTAGAATGCACTTCACT 59.415 43.478 0.00 0.00 40.61 3.41
3346 4411 3.686726 CAGGGAACTAGAATGCACTTCAC 59.313 47.826 0.00 0.00 40.21 3.18
3347 4412 3.582647 TCAGGGAACTAGAATGCACTTCA 59.417 43.478 0.00 0.00 40.21 3.02
3348 4413 4.207891 TCAGGGAACTAGAATGCACTTC 57.792 45.455 0.00 0.00 40.21 3.01
3349 4414 4.640771 TTCAGGGAACTAGAATGCACTT 57.359 40.909 0.00 0.00 40.21 3.16
3350 4415 4.640771 TTTCAGGGAACTAGAATGCACT 57.359 40.909 0.00 0.00 40.21 4.40
3351 4416 7.573968 AATATTTCAGGGAACTAGAATGCAC 57.426 36.000 0.00 0.00 40.21 4.57
3352 4417 7.833682 TGAAATATTTCAGGGAACTAGAATGCA 59.166 33.333 23.86 0.00 41.88 3.96
3353 4418 8.225603 TGAAATATTTCAGGGAACTAGAATGC 57.774 34.615 23.86 0.00 41.88 3.56
3367 4432 5.579047 ACATGACACCCCTGAAATATTTCA 58.421 37.500 25.44 25.44 44.31 2.69
3368 4433 6.263168 CCTACATGACACCCCTGAAATATTTC 59.737 42.308 19.37 19.37 37.69 2.17
3369 4434 6.129179 CCTACATGACACCCCTGAAATATTT 58.871 40.000 0.00 0.00 0.00 1.40
3370 4435 5.193728 ACCTACATGACACCCCTGAAATATT 59.806 40.000 0.00 0.00 0.00 1.28
3371 4436 4.726825 ACCTACATGACACCCCTGAAATAT 59.273 41.667 0.00 0.00 0.00 1.28
3372 4437 4.108570 ACCTACATGACACCCCTGAAATA 58.891 43.478 0.00 0.00 0.00 1.40
3373 4438 2.919602 ACCTACATGACACCCCTGAAAT 59.080 45.455 0.00 0.00 0.00 2.17
3374 4439 2.304761 GACCTACATGACACCCCTGAAA 59.695 50.000 0.00 0.00 0.00 2.69
3375 4440 1.906574 GACCTACATGACACCCCTGAA 59.093 52.381 0.00 0.00 0.00 3.02
3376 4441 1.078823 AGACCTACATGACACCCCTGA 59.921 52.381 0.00 0.00 0.00 3.86
3377 4442 1.573108 AGACCTACATGACACCCCTG 58.427 55.000 0.00 0.00 0.00 4.45
3378 4443 2.344093 AAGACCTACATGACACCCCT 57.656 50.000 0.00 0.00 0.00 4.79
3379 4444 4.563140 TTAAAGACCTACATGACACCCC 57.437 45.455 0.00 0.00 0.00 4.95
3380 4445 5.557866 AGTTTAAAGACCTACATGACACCC 58.442 41.667 0.00 0.00 0.00 4.61
3381 4446 8.038944 TCATAGTTTAAAGACCTACATGACACC 58.961 37.037 0.00 0.00 0.00 4.16
3382 4447 8.997621 TCATAGTTTAAAGACCTACATGACAC 57.002 34.615 0.00 0.00 0.00 3.67
3389 4454 9.989869 GCAGATTTTCATAGTTTAAAGACCTAC 57.010 33.333 0.00 0.00 0.00 3.18
3390 4455 9.733556 TGCAGATTTTCATAGTTTAAAGACCTA 57.266 29.630 0.00 0.00 0.00 3.08
3391 4456 8.635765 TGCAGATTTTCATAGTTTAAAGACCT 57.364 30.769 0.00 0.00 0.00 3.85
3392 4457 9.508567 GATGCAGATTTTCATAGTTTAAAGACC 57.491 33.333 0.00 0.00 0.00 3.85
3393 4458 9.508567 GGATGCAGATTTTCATAGTTTAAAGAC 57.491 33.333 0.00 0.00 0.00 3.01
3394 4459 9.466497 AGGATGCAGATTTTCATAGTTTAAAGA 57.534 29.630 0.00 0.00 0.00 2.52
3395 4460 9.512435 CAGGATGCAGATTTTCATAGTTTAAAG 57.488 33.333 0.00 0.00 0.00 1.85
3396 4461 8.469200 CCAGGATGCAGATTTTCATAGTTTAAA 58.531 33.333 0.00 0.00 31.97 1.52
3397 4462 7.615365 ACCAGGATGCAGATTTTCATAGTTTAA 59.385 33.333 0.00 0.00 31.97 1.52
3398 4463 7.118723 ACCAGGATGCAGATTTTCATAGTTTA 58.881 34.615 0.00 0.00 31.97 2.01
3399 4464 5.954150 ACCAGGATGCAGATTTTCATAGTTT 59.046 36.000 0.00 0.00 31.97 2.66
3400 4465 5.513233 ACCAGGATGCAGATTTTCATAGTT 58.487 37.500 0.00 0.00 31.97 2.24
3401 4466 5.121380 ACCAGGATGCAGATTTTCATAGT 57.879 39.130 0.00 0.00 31.97 2.12
3402 4467 4.518211 GGACCAGGATGCAGATTTTCATAG 59.482 45.833 0.00 0.00 31.97 2.23
3403 4468 4.166725 AGGACCAGGATGCAGATTTTCATA 59.833 41.667 0.00 0.00 31.97 2.15
3404 4469 3.053095 AGGACCAGGATGCAGATTTTCAT 60.053 43.478 0.00 0.00 31.97 2.57
3405 4470 2.309755 AGGACCAGGATGCAGATTTTCA 59.690 45.455 0.00 0.00 31.97 2.69
3406 4471 2.948315 GAGGACCAGGATGCAGATTTTC 59.052 50.000 0.00 0.00 31.97 2.29
3407 4472 2.681976 CGAGGACCAGGATGCAGATTTT 60.682 50.000 0.00 0.00 31.97 1.82
3408 4473 1.134280 CGAGGACCAGGATGCAGATTT 60.134 52.381 0.00 0.00 31.97 2.17
3409 4474 0.467384 CGAGGACCAGGATGCAGATT 59.533 55.000 0.00 0.00 31.97 2.40
3410 4475 0.397675 TCGAGGACCAGGATGCAGAT 60.398 55.000 0.00 0.00 31.97 2.90
3411 4476 0.614697 TTCGAGGACCAGGATGCAGA 60.615 55.000 0.00 0.00 31.97 4.26
3412 4477 0.179089 CTTCGAGGACCAGGATGCAG 60.179 60.000 0.00 0.00 31.97 4.41
3413 4478 0.904865 ACTTCGAGGACCAGGATGCA 60.905 55.000 0.00 0.00 31.97 3.96
3414 4479 0.460987 CACTTCGAGGACCAGGATGC 60.461 60.000 0.00 0.00 31.97 3.91
3415 4480 0.460987 GCACTTCGAGGACCAGGATG 60.461 60.000 0.00 0.00 0.00 3.51
3416 4481 0.904865 TGCACTTCGAGGACCAGGAT 60.905 55.000 0.00 0.00 0.00 3.24
3417 4482 1.533033 TGCACTTCGAGGACCAGGA 60.533 57.895 0.00 0.00 0.00 3.86
3418 4483 1.079543 CTGCACTTCGAGGACCAGG 60.080 63.158 0.00 0.00 0.00 4.45
3419 4484 0.888619 TACTGCACTTCGAGGACCAG 59.111 55.000 0.00 9.33 0.00 4.00
3420 4485 1.272490 CTTACTGCACTTCGAGGACCA 59.728 52.381 0.00 0.00 0.00 4.02
3421 4486 1.272769 ACTTACTGCACTTCGAGGACC 59.727 52.381 0.00 0.00 0.00 4.46
3422 4487 2.288273 ACACTTACTGCACTTCGAGGAC 60.288 50.000 0.00 0.00 0.00 3.85
3423 4488 1.961394 ACACTTACTGCACTTCGAGGA 59.039 47.619 0.00 0.00 0.00 3.71
3424 4489 2.061773 CACACTTACTGCACTTCGAGG 58.938 52.381 0.00 0.00 0.00 4.63
3425 4490 1.457303 GCACACTTACTGCACTTCGAG 59.543 52.381 0.00 0.00 34.56 4.04
3426 4491 1.497991 GCACACTTACTGCACTTCGA 58.502 50.000 0.00 0.00 34.56 3.71
3427 4492 0.512952 GGCACACTTACTGCACTTCG 59.487 55.000 0.00 0.00 36.27 3.79
3428 4493 1.593196 TGGCACACTTACTGCACTTC 58.407 50.000 0.00 0.00 36.27 3.01
3429 4494 3.798794 TGGCACACTTACTGCACTT 57.201 47.368 0.00 0.00 36.27 3.16
3445 4510 4.280174 CAGATAGATTTTGGGCCTGAATGG 59.720 45.833 4.53 0.00 39.35 3.16
3446 4511 5.009410 GTCAGATAGATTTTGGGCCTGAATG 59.991 44.000 4.53 0.00 31.98 2.67
3447 4512 5.136105 GTCAGATAGATTTTGGGCCTGAAT 58.864 41.667 4.53 4.76 31.98 2.57
3448 4513 4.526970 GTCAGATAGATTTTGGGCCTGAA 58.473 43.478 4.53 0.00 31.98 3.02
3449 4514 3.117888 GGTCAGATAGATTTTGGGCCTGA 60.118 47.826 4.53 0.00 0.00 3.86
3450 4515 3.117738 AGGTCAGATAGATTTTGGGCCTG 60.118 47.826 4.53 0.00 0.00 4.85
3451 4516 3.126453 AGGTCAGATAGATTTTGGGCCT 58.874 45.455 4.53 0.00 0.00 5.19
3452 4517 3.117888 TGAGGTCAGATAGATTTTGGGCC 60.118 47.826 0.00 0.00 0.00 5.80
3453 4518 3.879892 GTGAGGTCAGATAGATTTTGGGC 59.120 47.826 0.00 0.00 0.00 5.36
3454 4519 4.164988 AGGTGAGGTCAGATAGATTTTGGG 59.835 45.833 0.00 0.00 0.00 4.12
3455 4520 5.104776 TCAGGTGAGGTCAGATAGATTTTGG 60.105 44.000 0.00 0.00 0.00 3.28
3456 4521 5.814705 GTCAGGTGAGGTCAGATAGATTTTG 59.185 44.000 0.00 0.00 0.00 2.44
3457 4522 5.104735 GGTCAGGTGAGGTCAGATAGATTTT 60.105 44.000 0.00 0.00 0.00 1.82
3458 4523 4.407296 GGTCAGGTGAGGTCAGATAGATTT 59.593 45.833 0.00 0.00 0.00 2.17
3459 4524 3.964031 GGTCAGGTGAGGTCAGATAGATT 59.036 47.826 0.00 0.00 0.00 2.40
3460 4525 3.571590 GGTCAGGTGAGGTCAGATAGAT 58.428 50.000 0.00 0.00 0.00 1.98
3461 4526 2.684038 CGGTCAGGTGAGGTCAGATAGA 60.684 54.545 0.00 0.00 0.00 1.98
3462 4527 1.678627 CGGTCAGGTGAGGTCAGATAG 59.321 57.143 0.00 0.00 0.00 2.08
3463 4528 1.685180 CCGGTCAGGTGAGGTCAGATA 60.685 57.143 0.00 0.00 34.51 1.98
3464 4529 0.972983 CCGGTCAGGTGAGGTCAGAT 60.973 60.000 0.00 0.00 34.51 2.90
3465 4530 1.606601 CCGGTCAGGTGAGGTCAGA 60.607 63.158 0.00 0.00 34.51 3.27
3466 4531 2.973899 CCGGTCAGGTGAGGTCAG 59.026 66.667 0.00 0.00 34.51 3.51
3467 4532 3.311110 GCCGGTCAGGTGAGGTCA 61.311 66.667 1.90 0.00 43.70 4.02
3468 4533 4.083862 GGCCGGTCAGGTGAGGTC 62.084 72.222 0.00 0.00 43.70 3.85
3469 4534 4.954118 TGGCCGGTCAGGTGAGGT 62.954 66.667 3.51 0.00 43.70 3.85
3470 4535 4.087892 CTGGCCGGTCAGGTGAGG 62.088 72.222 28.88 1.48 43.70 3.86
3471 4536 4.767255 GCTGGCCGGTCAGGTGAG 62.767 72.222 35.68 13.26 43.70 3.51
3472 4537 3.897681 TAGCTGGCCGGTCAGGTGA 62.898 63.158 42.58 26.55 44.10 4.02
3473 4538 3.390521 TAGCTGGCCGGTCAGGTG 61.391 66.667 42.58 19.73 44.10 4.00
3474 4539 3.391382 GTAGCTGGCCGGTCAGGT 61.391 66.667 39.32 39.32 45.86 4.00
3475 4540 4.514577 CGTAGCTGGCCGGTCAGG 62.515 72.222 35.68 16.66 44.97 3.86
3488 4553 2.807895 CACGGGTCAACGGCGTAG 60.808 66.667 15.20 3.46 38.39 3.51
3492 4557 4.025401 CAAGCACGGGTCAACGGC 62.025 66.667 0.00 0.00 38.39 5.68
3493 4558 0.881159 TAACAAGCACGGGTCAACGG 60.881 55.000 0.00 0.00 38.39 4.44
3494 4559 0.511221 CTAACAAGCACGGGTCAACG 59.489 55.000 0.00 0.00 40.31 4.10
3495 4560 1.873698 TCTAACAAGCACGGGTCAAC 58.126 50.000 0.00 0.00 0.00 3.18
3496 4561 2.489971 CTTCTAACAAGCACGGGTCAA 58.510 47.619 0.00 0.00 0.00 3.18
3497 4562 1.270625 CCTTCTAACAAGCACGGGTCA 60.271 52.381 0.00 0.00 0.00 4.02
3498 4563 1.439679 CCTTCTAACAAGCACGGGTC 58.560 55.000 0.00 0.00 0.00 4.46
3499 4564 0.036306 CCCTTCTAACAAGCACGGGT 59.964 55.000 0.00 0.00 0.00 5.28
3500 4565 0.676782 CCCCTTCTAACAAGCACGGG 60.677 60.000 0.00 0.00 0.00 5.28
3501 4566 0.676782 CCCCCTTCTAACAAGCACGG 60.677 60.000 0.00 0.00 0.00 4.94
3502 4567 1.305930 GCCCCCTTCTAACAAGCACG 61.306 60.000 0.00 0.00 0.00 5.34
3503 4568 0.965866 GGCCCCCTTCTAACAAGCAC 60.966 60.000 0.00 0.00 0.00 4.40
3504 4569 1.382629 GGCCCCCTTCTAACAAGCA 59.617 57.895 0.00 0.00 0.00 3.91
3505 4570 1.379977 GGGCCCCCTTCTAACAAGC 60.380 63.158 12.23 0.00 0.00 4.01
3506 4571 2.398919 AGGGCCCCCTTCTAACAAG 58.601 57.895 21.43 0.00 45.70 3.16
3507 4572 4.703043 AGGGCCCCCTTCTAACAA 57.297 55.556 21.43 0.00 45.70 2.83
3516 4581 1.453197 CGTTACATTGAGGGCCCCC 60.453 63.158 21.43 7.52 0.00 5.40
3517 4582 0.746923 GTCGTTACATTGAGGGCCCC 60.747 60.000 21.43 11.17 0.00 5.80
3518 4583 0.252197 AGTCGTTACATTGAGGGCCC 59.748 55.000 16.46 16.46 0.00 5.80
3519 4584 1.066430 TGAGTCGTTACATTGAGGGCC 60.066 52.381 0.00 0.00 0.00 5.80
3520 4585 2.380084 TGAGTCGTTACATTGAGGGC 57.620 50.000 0.00 0.00 0.00 5.19
3521 4586 3.865745 GTCATGAGTCGTTACATTGAGGG 59.134 47.826 0.00 0.00 0.00 4.30
3522 4587 3.547868 CGTCATGAGTCGTTACATTGAGG 59.452 47.826 0.00 0.00 0.00 3.86
3523 4588 4.412207 TCGTCATGAGTCGTTACATTGAG 58.588 43.478 0.00 0.00 0.00 3.02
3524 4589 4.428615 TCGTCATGAGTCGTTACATTGA 57.571 40.909 0.00 0.00 0.00 2.57
3525 4590 5.509605 TTTCGTCATGAGTCGTTACATTG 57.490 39.130 0.00 0.00 0.00 2.82
3526 4591 6.721571 ATTTTCGTCATGAGTCGTTACATT 57.278 33.333 0.00 0.00 0.00 2.71
3527 4592 7.516785 GCATATTTTCGTCATGAGTCGTTACAT 60.517 37.037 0.00 0.00 0.00 2.29
3528 4593 6.237728 GCATATTTTCGTCATGAGTCGTTACA 60.238 38.462 0.00 0.00 0.00 2.41
3529 4594 6.120812 GCATATTTTCGTCATGAGTCGTTAC 58.879 40.000 0.00 0.00 0.00 2.50
3530 4595 5.808030 TGCATATTTTCGTCATGAGTCGTTA 59.192 36.000 0.00 0.00 0.00 3.18
3531 4596 4.629634 TGCATATTTTCGTCATGAGTCGTT 59.370 37.500 0.00 0.00 0.00 3.85
3532 4597 4.180817 TGCATATTTTCGTCATGAGTCGT 58.819 39.130 0.00 0.00 0.00 4.34
3533 4598 4.777140 TGCATATTTTCGTCATGAGTCG 57.223 40.909 0.00 0.00 0.00 4.18
3534 4599 9.502145 TTTATTTGCATATTTTCGTCATGAGTC 57.498 29.630 0.00 0.00 0.00 3.36
3563 4628 9.784680 TGAACAATTTTTGAAACCATGAATTTG 57.215 25.926 0.00 0.00 0.00 2.32
3565 4630 9.953697 CATGAACAATTTTTGAAACCATGAATT 57.046 25.926 0.00 0.00 33.32 2.17
3566 4631 9.339850 TCATGAACAATTTTTGAAACCATGAAT 57.660 25.926 0.00 0.00 35.29 2.57
3567 4632 8.728337 TCATGAACAATTTTTGAAACCATGAA 57.272 26.923 0.00 0.00 35.29 2.57
3568 4633 8.728337 TTCATGAACAATTTTTGAAACCATGA 57.272 26.923 3.38 0.00 35.78 3.07
3583 4648 9.033711 TGAAGATTTTCCCATATTCATGAACAA 57.966 29.630 11.07 2.26 31.01 2.83
3584 4649 8.469200 GTGAAGATTTTCCCATATTCATGAACA 58.531 33.333 11.07 0.00 36.89 3.18
3585 4650 7.645340 CGTGAAGATTTTCCCATATTCATGAAC 59.355 37.037 11.07 0.00 41.15 3.18
3586 4651 7.555914 TCGTGAAGATTTTCCCATATTCATGAA 59.444 33.333 11.26 11.26 42.97 2.57
3587 4652 7.012327 GTCGTGAAGATTTTCCCATATTCATGA 59.988 37.037 8.27 8.27 43.38 3.07
3588 4653 7.012704 AGTCGTGAAGATTTTCCCATATTCATG 59.987 37.037 4.56 4.56 40.49 3.07
3589 4654 7.056635 AGTCGTGAAGATTTTCCCATATTCAT 58.943 34.615 0.00 0.00 36.89 2.57
3590 4655 6.414732 AGTCGTGAAGATTTTCCCATATTCA 58.585 36.000 0.00 0.00 33.06 2.57
3591 4656 6.927294 AGTCGTGAAGATTTTCCCATATTC 57.073 37.500 0.00 0.00 32.09 1.75
3592 4657 7.703058 AAAGTCGTGAAGATTTTCCCATATT 57.297 32.000 0.00 0.00 34.25 1.28
3593 4658 8.801882 TTAAAGTCGTGAAGATTTTCCCATAT 57.198 30.769 0.00 0.00 39.18 1.78
3594 4659 8.801882 ATTAAAGTCGTGAAGATTTTCCCATA 57.198 30.769 0.00 0.00 39.18 2.74
3595 4660 7.703058 ATTAAAGTCGTGAAGATTTTCCCAT 57.297 32.000 0.00 0.00 39.18 4.00
3596 4661 8.624367 TTATTAAAGTCGTGAAGATTTTCCCA 57.376 30.769 0.00 0.00 39.18 4.37
3642 4707 9.896263 GCAATTGTTTTTCCATATTCAAACATT 57.104 25.926 7.40 0.00 38.56 2.71
3643 4708 8.229137 CGCAATTGTTTTTCCATATTCAAACAT 58.771 29.630 7.40 0.00 38.56 2.71
3644 4709 7.439356 TCGCAATTGTTTTTCCATATTCAAACA 59.561 29.630 7.40 0.00 37.35 2.83
3645 4710 7.739911 GTCGCAATTGTTTTTCCATATTCAAAC 59.260 33.333 7.40 0.00 0.00 2.93
3646 4711 7.655328 AGTCGCAATTGTTTTTCCATATTCAAA 59.345 29.630 7.40 0.00 0.00 2.69
3647 4712 7.151308 AGTCGCAATTGTTTTTCCATATTCAA 58.849 30.769 7.40 0.00 0.00 2.69
3648 4713 6.686630 AGTCGCAATTGTTTTTCCATATTCA 58.313 32.000 7.40 0.00 0.00 2.57
3649 4714 7.581011 AAGTCGCAATTGTTTTTCCATATTC 57.419 32.000 7.40 0.00 0.00 1.75
3650 4715 7.961325 AAAGTCGCAATTGTTTTTCCATATT 57.039 28.000 7.40 0.00 0.00 1.28
3651 4716 9.482627 TTTAAAGTCGCAATTGTTTTTCCATAT 57.517 25.926 7.40 0.00 0.00 1.78
3652 4717 8.873215 TTTAAAGTCGCAATTGTTTTTCCATA 57.127 26.923 7.40 0.00 0.00 2.74
3653 4718 7.778470 TTTAAAGTCGCAATTGTTTTTCCAT 57.222 28.000 7.40 0.00 0.00 3.41
3654 4719 7.596749 TTTTAAAGTCGCAATTGTTTTTCCA 57.403 28.000 7.40 0.00 0.00 3.53
3704 4769 7.547370 TCCAAATTCATTGTTCGTGAACTTTTT 59.453 29.630 13.40 3.07 41.67 1.94
3705 4770 7.038659 TCCAAATTCATTGTTCGTGAACTTTT 58.961 30.769 13.40 2.79 41.67 2.27
3706 4771 6.568869 TCCAAATTCATTGTTCGTGAACTTT 58.431 32.000 13.40 2.70 41.67 2.66
3707 4772 6.142818 TCCAAATTCATTGTTCGTGAACTT 57.857 33.333 13.40 0.00 41.67 2.66
3708 4773 5.766150 TCCAAATTCATTGTTCGTGAACT 57.234 34.783 13.40 0.00 41.67 3.01
3709 4774 6.205784 TCTTCCAAATTCATTGTTCGTGAAC 58.794 36.000 5.80 5.80 38.31 3.18
3710 4775 6.262049 TCTCTTCCAAATTCATTGTTCGTGAA 59.738 34.615 0.00 0.00 39.65 3.18
3711 4776 5.762711 TCTCTTCCAAATTCATTGTTCGTGA 59.237 36.000 0.00 0.00 37.32 4.35
3712 4777 6.000891 TCTCTTCCAAATTCATTGTTCGTG 57.999 37.500 0.00 0.00 37.32 4.35
3713 4778 6.633500 TTCTCTTCCAAATTCATTGTTCGT 57.367 33.333 0.00 0.00 37.32 3.85
3714 4779 7.928908 TTTTCTCTTCCAAATTCATTGTTCG 57.071 32.000 0.00 0.00 37.32 3.95
3736 4801 5.427036 TTCTTAAGGTCGCGAACATTTTT 57.573 34.783 28.31 14.32 33.18 1.94
3737 4802 5.622770 ATTCTTAAGGTCGCGAACATTTT 57.377 34.783 28.31 14.71 33.18 1.82
3738 4803 5.622770 AATTCTTAAGGTCGCGAACATTT 57.377 34.783 28.31 15.50 33.18 2.32
3739 4804 5.622770 AAATTCTTAAGGTCGCGAACATT 57.377 34.783 28.31 18.99 35.69 2.71
3740 4805 5.622770 AAAATTCTTAAGGTCGCGAACAT 57.377 34.783 28.31 18.28 0.00 2.71
3741 4806 5.427036 AAAAATTCTTAAGGTCGCGAACA 57.573 34.783 28.31 2.77 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.