Multiple sequence alignment - TraesCS1D01G380200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G380200 chr1D 100.000 5692 0 0 1 5692 455792975 455787284 0.000000e+00 10512.0
1 TraesCS1D01G380200 chr1A 90.009 2262 138 40 3272 5475 549425637 549423406 0.000000e+00 2844.0
2 TraesCS1D01G380200 chr1A 87.721 1979 155 40 113 2055 549428268 549426342 0.000000e+00 2228.0
3 TraesCS1D01G380200 chr1A 84.517 704 81 15 2101 2788 549426327 549425636 0.000000e+00 671.0
4 TraesCS1D01G380200 chr1A 90.957 188 12 3 5506 5692 549423199 549423016 1.220000e-61 248.0
5 TraesCS1D01G380200 chr1B 84.998 2453 202 83 3087 5487 626232384 626230046 0.000000e+00 2338.0
6 TraesCS1D01G380200 chr1B 88.077 1971 171 34 119 2055 626235105 626233165 0.000000e+00 2279.0
7 TraesCS1D01G380200 chr1B 84.146 738 70 25 2101 2815 626233150 626232437 0.000000e+00 671.0
8 TraesCS1D01G380200 chr1B 89.302 215 15 4 5485 5692 626230004 626229791 4.370000e-66 263.0
9 TraesCS1D01G380200 chr1B 83.186 113 13 3 3 114 626235189 626235082 1.310000e-16 99.0
10 TraesCS1D01G380200 chr3D 81.556 347 50 12 3342 3681 363267845 363267506 2.020000e-69 274.0
11 TraesCS1D01G380200 chr3D 93.496 123 7 1 2375 2496 363270344 363270222 1.260000e-41 182.0
12 TraesCS1D01G380200 chr3D 93.548 93 6 0 1001 1093 363273204 363273112 7.690000e-29 139.0
13 TraesCS1D01G380200 chr3D 89.655 87 5 4 3758 3842 363267391 363267307 2.170000e-19 108.0
14 TraesCS1D01G380200 chr3A 81.322 348 51 11 3342 3681 484104205 484103864 2.610000e-68 270.0
15 TraesCS1D01G380200 chr3A 88.421 190 16 3 5507 5692 707170152 707169965 2.060000e-54 224.0
16 TraesCS1D01G380200 chr3A 80.451 266 38 11 2375 2632 484105166 484104907 2.090000e-44 191.0
17 TraesCS1D01G380200 chr3A 82.609 184 24 8 2873 3052 444286778 444286957 7.640000e-34 156.0
18 TraesCS1D01G380200 chr3A 93.651 63 4 0 2131 2193 484106016 484105954 1.690000e-15 95.3
19 TraesCS1D01G380200 chr3B 80.802 349 51 12 3342 3681 473182257 473181916 5.660000e-65 259.0
20 TraesCS1D01G380200 chr3B 89.474 190 16 2 5507 5692 237976798 237976609 2.650000e-58 237.0
21 TraesCS1D01G380200 chr3B 81.579 266 35 11 2375 2632 473183933 473183674 2.080000e-49 207.0
22 TraesCS1D01G380200 chr3B 80.628 191 24 9 2869 3058 8853127 8853305 9.950000e-28 135.0
23 TraesCS1D01G380200 chr3B 93.651 63 4 0 2131 2193 473184837 473184775 1.690000e-15 95.3
24 TraesCS1D01G380200 chr3B 92.982 57 4 0 5507 5563 237974121 237974177 3.650000e-12 84.2
25 TraesCS1D01G380200 chr4B 85.915 213 29 1 2869 3081 536905362 536905573 5.740000e-55 226.0
26 TraesCS1D01G380200 chr7B 87.895 190 19 2 5507 5692 399795171 399794982 2.670000e-53 220.0
27 TraesCS1D01G380200 chr7B 92.982 57 4 0 5507 5563 399792494 399792550 3.650000e-12 84.2
28 TraesCS1D01G380200 chr5A 84.878 205 22 5 2866 3061 369628303 369628507 1.250000e-46 198.0
29 TraesCS1D01G380200 chr5D 84.000 200 24 4 2869 3061 278634185 278633987 9.740000e-43 185.0
30 TraesCS1D01G380200 chr5D 83.417 199 29 2 2865 3061 476782787 476782591 1.260000e-41 182.0
31 TraesCS1D01G380200 chr4D 82.063 223 30 10 2866 3084 7999394 7999178 1.260000e-41 182.0
32 TraesCS1D01G380200 chr4D 83.598 189 21 10 2869 3053 46587022 46587204 9.810000e-38 169.0
33 TraesCS1D01G380200 chr7A 83.158 190 26 6 2866 3052 183660559 183660745 9.810000e-38 169.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G380200 chr1D 455787284 455792975 5691 True 10512.00 10512 100.0000 1 5692 1 chr1D.!!$R1 5691
1 TraesCS1D01G380200 chr1A 549423016 549428268 5252 True 1497.75 2844 88.3010 113 5692 4 chr1A.!!$R1 5579
2 TraesCS1D01G380200 chr1B 626229791 626235189 5398 True 1130.00 2338 85.9418 3 5692 5 chr1B.!!$R1 5689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 79 0.112412 ACGGTGAGCTCCCCAATTTT 59.888 50.0 15.99 0.0 0.00 1.82 F
295 296 0.392706 GGCACCCCAAAAACCTTCAG 59.607 55.0 0.00 0.0 0.00 3.02 F
1612 1656 0.105964 ACTGTACTTGCTCCGCACAA 59.894 50.0 0.00 0.0 38.71 3.33 F
2927 3008 0.252742 AAGCTACCACCTACCCAGCT 60.253 55.0 0.00 0.0 44.21 4.24 F
3056 3137 0.033109 AGGGGGCAGCTTATTTCCAC 60.033 55.0 0.00 0.0 0.00 4.02 F
3057 3138 0.324275 GGGGGCAGCTTATTTCCACA 60.324 55.0 0.00 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1227 1262 0.612229 CCACACAGAGGAGCATCAGT 59.388 55.000 0.00 0.00 36.25 3.41 R
2044 2102 0.686789 TCATGGCCATGATACCGAGG 59.313 55.000 38.91 15.29 42.42 4.63 R
3037 3118 0.033109 GTGGAAATAAGCTGCCCCCT 60.033 55.000 0.00 0.00 0.00 4.79 R
4540 4638 0.252696 TGGCATAGTCAGTCCCCACT 60.253 55.000 0.00 0.00 0.00 4.00 R
4596 4694 0.762418 TCTCTTTCCTGCCAACGGAA 59.238 50.000 0.00 0.00 38.71 4.30 R
4967 5102 1.130749 GCTGACTGCTGAGCAAGATTG 59.869 52.381 9.07 0.00 38.41 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 7.780064 TGATGGTGTATTGTAAATGAATTGGG 58.220 34.615 0.00 0.00 0.00 4.12
35 36 5.423610 TGGTGTATTGTAAATGAATTGGGGG 59.576 40.000 0.00 0.00 0.00 5.40
38 39 6.605594 GTGTATTGTAAATGAATTGGGGGAGA 59.394 38.462 0.00 0.00 0.00 3.71
39 40 7.287696 GTGTATTGTAAATGAATTGGGGGAGAT 59.712 37.037 0.00 0.00 0.00 2.75
42 43 6.543430 TGTAAATGAATTGGGGGAGATTTG 57.457 37.500 0.00 0.00 0.00 2.32
43 44 6.259893 TGTAAATGAATTGGGGGAGATTTGA 58.740 36.000 0.00 0.00 0.00 2.69
44 45 6.902416 TGTAAATGAATTGGGGGAGATTTGAT 59.098 34.615 0.00 0.00 0.00 2.57
46 47 7.993349 AAATGAATTGGGGGAGATTTGATTA 57.007 32.000 0.00 0.00 0.00 1.75
47 48 8.571460 AAATGAATTGGGGGAGATTTGATTAT 57.429 30.769 0.00 0.00 0.00 1.28
48 49 8.571460 AATGAATTGGGGGAGATTTGATTATT 57.429 30.769 0.00 0.00 0.00 1.40
49 50 9.673283 AATGAATTGGGGGAGATTTGATTATTA 57.327 29.630 0.00 0.00 0.00 0.98
70 71 2.467566 TTTTTAGGACGGTGAGCTCC 57.532 50.000 12.15 2.19 0.00 4.70
75 76 2.670148 GGACGGTGAGCTCCCCAAT 61.670 63.158 15.99 2.17 0.00 3.16
78 79 0.112412 ACGGTGAGCTCCCCAATTTT 59.888 50.000 15.99 0.00 0.00 1.82
87 88 2.632512 GCTCCCCAATTTTGACTTTGGA 59.367 45.455 3.32 0.00 44.23 3.53
88 89 3.554960 GCTCCCCAATTTTGACTTTGGAC 60.555 47.826 3.32 0.00 44.23 4.02
89 90 3.897505 CTCCCCAATTTTGACTTTGGACT 59.102 43.478 3.32 0.00 44.23 3.85
90 91 3.640967 TCCCCAATTTTGACTTTGGACTG 59.359 43.478 3.32 0.00 44.23 3.51
91 92 3.387699 CCCCAATTTTGACTTTGGACTGT 59.612 43.478 3.32 0.00 44.23 3.55
92 93 4.141733 CCCCAATTTTGACTTTGGACTGTT 60.142 41.667 3.32 0.00 44.23 3.16
93 94 4.810491 CCCAATTTTGACTTTGGACTGTTG 59.190 41.667 3.32 0.00 44.23 3.33
94 95 4.270808 CCAATTTTGACTTTGGACTGTTGC 59.729 41.667 0.00 0.00 44.23 4.17
95 96 4.734398 ATTTTGACTTTGGACTGTTGCA 57.266 36.364 0.00 0.00 0.00 4.08
96 97 4.527509 TTTTGACTTTGGACTGTTGCAA 57.472 36.364 0.00 0.00 0.00 4.08
97 98 4.734398 TTTGACTTTGGACTGTTGCAAT 57.266 36.364 0.59 0.00 32.39 3.56
98 99 5.843673 TTTGACTTTGGACTGTTGCAATA 57.156 34.783 0.59 0.00 32.39 1.90
99 100 4.829064 TGACTTTGGACTGTTGCAATAC 57.171 40.909 0.59 0.00 32.39 1.89
100 101 4.460263 TGACTTTGGACTGTTGCAATACT 58.540 39.130 0.59 0.00 32.39 2.12
101 102 5.616270 TGACTTTGGACTGTTGCAATACTA 58.384 37.500 0.59 0.00 32.39 1.82
102 103 5.700832 TGACTTTGGACTGTTGCAATACTAG 59.299 40.000 0.59 1.94 32.39 2.57
103 104 5.621193 ACTTTGGACTGTTGCAATACTAGT 58.379 37.500 0.59 0.00 32.39 2.57
104 105 6.062095 ACTTTGGACTGTTGCAATACTAGTT 58.938 36.000 0.59 0.00 32.39 2.24
105 106 6.546034 ACTTTGGACTGTTGCAATACTAGTTT 59.454 34.615 0.59 0.00 32.39 2.66
106 107 6.952773 TTGGACTGTTGCAATACTAGTTTT 57.047 33.333 0.59 0.00 0.00 2.43
107 108 6.312399 TGGACTGTTGCAATACTAGTTTTG 57.688 37.500 18.49 18.49 0.00 2.44
108 109 6.058833 TGGACTGTTGCAATACTAGTTTTGA 58.941 36.000 24.75 10.73 0.00 2.69
109 110 6.714810 TGGACTGTTGCAATACTAGTTTTGAT 59.285 34.615 24.75 0.30 0.00 2.57
110 111 7.094805 TGGACTGTTGCAATACTAGTTTTGATC 60.095 37.037 24.75 15.25 0.00 2.92
111 112 7.145932 ACTGTTGCAATACTAGTTTTGATCC 57.854 36.000 24.75 13.39 0.00 3.36
112 113 6.942576 ACTGTTGCAATACTAGTTTTGATCCT 59.057 34.615 24.75 3.82 0.00 3.24
113 114 7.448469 ACTGTTGCAATACTAGTTTTGATCCTT 59.552 33.333 24.75 5.75 0.00 3.36
114 115 7.592938 TGTTGCAATACTAGTTTTGATCCTTG 58.407 34.615 24.75 3.05 0.00 3.61
115 116 6.757897 TGCAATACTAGTTTTGATCCTTGG 57.242 37.500 24.75 1.84 0.00 3.61
116 117 5.652014 TGCAATACTAGTTTTGATCCTTGGG 59.348 40.000 24.75 1.23 0.00 4.12
117 118 5.450550 GCAATACTAGTTTTGATCCTTGGGC 60.451 44.000 24.75 6.81 0.00 5.36
160 161 7.290014 TGATCCCTATTACAATGAAGTAGAGCA 59.710 37.037 0.00 0.00 0.00 4.26
161 162 6.817184 TCCCTATTACAATGAAGTAGAGCAC 58.183 40.000 0.00 0.00 0.00 4.40
196 197 2.352032 GCCACCTGCTAGACCGAGT 61.352 63.158 0.00 0.00 36.87 4.18
218 219 1.514678 GCCGTGTGTGCAATTCCTGA 61.515 55.000 0.00 0.00 0.00 3.86
222 223 1.333619 GTGTGTGCAATTCCTGAACGT 59.666 47.619 0.00 0.00 36.16 3.99
224 225 0.950836 TGTGCAATTCCTGAACGTGG 59.049 50.000 0.00 0.00 36.16 4.94
233 234 1.669115 CTGAACGTGGTGGAGGCAG 60.669 63.158 0.00 0.00 0.00 4.85
242 243 1.679305 GTGGAGGCAGACGAGGAGA 60.679 63.158 0.00 0.00 0.00 3.71
295 296 0.392706 GGCACCCCAAAAACCTTCAG 59.607 55.000 0.00 0.00 0.00 3.02
297 298 1.118838 CACCCCAAAAACCTTCAGCA 58.881 50.000 0.00 0.00 0.00 4.41
299 300 2.104622 CACCCCAAAAACCTTCAGCAAT 59.895 45.455 0.00 0.00 0.00 3.56
307 308 0.396435 ACCTTCAGCAATCGTCACCA 59.604 50.000 0.00 0.00 0.00 4.17
312 313 3.121030 GCAATCGTCACCAGCGCT 61.121 61.111 2.64 2.64 0.00 5.92
353 355 3.822735 TGCATCACTTCCCTGAAAGAAAG 59.177 43.478 0.00 0.00 34.07 2.62
426 431 4.575236 GCTATACACCCTCTTTTTGCTACC 59.425 45.833 0.00 0.00 0.00 3.18
458 463 2.437281 CCACTCATTCTACATGGCCTCT 59.563 50.000 3.32 0.00 0.00 3.69
489 494 2.153645 TGCTCATCCATTGACACACAC 58.846 47.619 0.00 0.00 0.00 3.82
516 521 1.069596 CGATGTCCGGCCATCATCA 59.930 57.895 24.08 8.46 41.06 3.07
525 530 2.575532 CGGCCATCATCAGTTACCATT 58.424 47.619 2.24 0.00 0.00 3.16
557 562 0.537371 CGTTGGCCAACCCTTCTTCT 60.537 55.000 36.75 0.00 38.03 2.85
578 583 2.562296 TGCCCTCATTCTCTACCCTTT 58.438 47.619 0.00 0.00 0.00 3.11
580 585 2.505819 GCCCTCATTCTCTACCCTTTCA 59.494 50.000 0.00 0.00 0.00 2.69
584 589 4.226168 CCTCATTCTCTACCCTTTCACCTT 59.774 45.833 0.00 0.00 0.00 3.50
585 590 5.165961 TCATTCTCTACCCTTTCACCTTG 57.834 43.478 0.00 0.00 0.00 3.61
598 603 5.107065 CCTTTCACCTTGTATGTTTCGTCTC 60.107 44.000 0.00 0.00 0.00 3.36
620 625 4.039245 TCCTTCCTCGTCATTGATGTATCC 59.961 45.833 5.80 0.00 0.00 2.59
625 630 2.102420 TCGTCATTGATGTATCCGCCTT 59.898 45.455 5.80 0.00 0.00 4.35
652 663 1.424638 ATCCCCAAGACTATGGACCG 58.575 55.000 5.53 0.00 43.54 4.79
663 674 3.009723 ACTATGGACCGCATGTTTGAAG 58.990 45.455 0.00 0.00 0.00 3.02
668 679 2.477863 GGACCGCATGTTTGAAGCATAC 60.478 50.000 0.00 0.00 0.00 2.39
669 680 2.158559 ACCGCATGTTTGAAGCATACA 58.841 42.857 0.00 0.00 30.86 2.29
759 770 0.687354 GAGAAGGAAGTGACTGGCCA 59.313 55.000 4.71 4.71 0.00 5.36
876 899 2.364317 CCTTCCCCTCTCTCGCCA 60.364 66.667 0.00 0.00 0.00 5.69
879 902 4.779733 TCCCCTCTCTCGCCACCC 62.780 72.222 0.00 0.00 0.00 4.61
999 1022 3.665675 ATTCCAGCACTCCGGCGAC 62.666 63.158 9.30 0.00 39.27 5.19
1186 1212 1.045911 GCCTAGGTCCTGGAGGTCTG 61.046 65.000 11.31 0.00 36.34 3.51
1227 1262 1.590665 GCTGAGCTGAGCTGAGTGA 59.409 57.895 21.49 0.00 41.72 3.41
1237 1272 0.536260 AGCTGAGTGACTGATGCTCC 59.464 55.000 0.00 0.00 0.00 4.70
1239 1274 1.471327 GCTGAGTGACTGATGCTCCTC 60.471 57.143 0.00 0.00 0.00 3.71
1246 1281 0.612229 ACTGATGCTCCTCTGTGTGG 59.388 55.000 0.00 0.00 0.00 4.17
1424 1465 1.624479 ATGGTCTCTGGCTCTGCTGG 61.624 60.000 0.00 0.00 0.00 4.85
1425 1466 2.289532 GGTCTCTGGCTCTGCTGGT 61.290 63.158 0.00 0.00 0.00 4.00
1426 1467 0.972983 GGTCTCTGGCTCTGCTGGTA 60.973 60.000 0.00 0.00 0.00 3.25
1525 1569 1.452145 GCGGGTTCAACAGCCTTGAA 61.452 55.000 3.55 3.55 41.47 2.69
1612 1656 0.105964 ACTGTACTTGCTCCGCACAA 59.894 50.000 0.00 0.00 38.71 3.33
1623 1673 3.559655 TGCTCCGCACAATTATCATGTAC 59.440 43.478 0.00 0.00 31.71 2.90
1733 1786 3.603158 TTTAGCTTGCTGTCATCGGTA 57.397 42.857 5.26 0.00 0.00 4.02
1734 1787 2.579207 TAGCTTGCTGTCATCGGTAC 57.421 50.000 5.26 0.00 0.00 3.34
1735 1788 0.898320 AGCTTGCTGTCATCGGTACT 59.102 50.000 0.00 0.00 0.00 2.73
1736 1789 1.134965 AGCTTGCTGTCATCGGTACTC 60.135 52.381 0.00 0.00 0.00 2.59
1737 1790 1.134965 GCTTGCTGTCATCGGTACTCT 60.135 52.381 0.00 0.00 0.00 3.24
1744 1797 4.740695 GCTGTCATCGGTACTCTAATTCAC 59.259 45.833 0.00 0.00 0.00 3.18
1756 1809 7.863375 GGTACTCTAATTCACTAGTATGCTGTG 59.137 40.741 0.00 0.56 0.00 3.66
1872 1925 4.887655 TGATACTCCTTCGCTGTAGAATGA 59.112 41.667 0.00 0.00 0.00 2.57
1874 1927 3.851098 ACTCCTTCGCTGTAGAATGAAC 58.149 45.455 0.00 0.00 0.00 3.18
1876 1929 2.565391 TCCTTCGCTGTAGAATGAACCA 59.435 45.455 0.00 0.00 0.00 3.67
1877 1930 3.197766 TCCTTCGCTGTAGAATGAACCAT 59.802 43.478 0.00 0.00 0.00 3.55
1879 1932 4.201851 CCTTCGCTGTAGAATGAACCATTG 60.202 45.833 0.00 0.00 33.90 2.82
1880 1933 4.200838 TCGCTGTAGAATGAACCATTGA 57.799 40.909 0.00 0.00 33.90 2.57
1898 1952 9.807649 AACCATTGACTCATGCTTAATAAAATC 57.192 29.630 0.00 0.00 0.00 2.17
1926 1980 5.491070 AGCATTAACATACTTGCTGACTCA 58.509 37.500 0.00 0.00 43.44 3.41
1933 1987 6.369059 ACATACTTGCTGACTCAATATTGC 57.631 37.500 10.76 0.00 0.00 3.56
1934 1988 6.118170 ACATACTTGCTGACTCAATATTGCT 58.882 36.000 10.76 0.00 0.00 3.91
1935 1989 4.959596 ACTTGCTGACTCAATATTGCTG 57.040 40.909 10.76 8.39 0.00 4.41
1938 1992 5.474532 ACTTGCTGACTCAATATTGCTGAAA 59.525 36.000 10.76 1.96 0.00 2.69
1939 1993 6.152323 ACTTGCTGACTCAATATTGCTGAAAT 59.848 34.615 10.76 0.00 0.00 2.17
1940 1994 7.337689 ACTTGCTGACTCAATATTGCTGAAATA 59.662 33.333 10.76 0.00 35.21 1.40
1941 1995 7.628769 TGCTGACTCAATATTGCTGAAATAA 57.371 32.000 10.76 0.00 34.41 1.40
1942 1996 7.475015 TGCTGACTCAATATTGCTGAAATAAC 58.525 34.615 10.76 0.00 34.41 1.89
1948 2002 8.612619 ACTCAATATTGCTGAAATAACGGTTAG 58.387 33.333 10.76 0.01 34.41 2.34
1983 2037 8.795786 TTTCTGTTCGAATCCAGTTTATTTTG 57.204 30.769 13.61 0.00 0.00 2.44
1993 2047 5.049167 TCCAGTTTATTTTGCTTTGCACTG 58.951 37.500 0.00 0.00 38.71 3.66
2006 2060 5.068987 TGCTTTGCACTGGAAGAGTTATTTT 59.931 36.000 0.00 0.00 37.43 1.82
2007 2061 5.631096 GCTTTGCACTGGAAGAGTTATTTTC 59.369 40.000 0.00 0.00 37.43 2.29
2009 2063 5.947228 TGCACTGGAAGAGTTATTTTCAG 57.053 39.130 0.00 0.00 37.43 3.02
2011 2065 5.827797 TGCACTGGAAGAGTTATTTTCAGTT 59.172 36.000 0.00 0.00 37.43 3.16
2014 2072 7.308830 GCACTGGAAGAGTTATTTTCAGTTCAT 60.309 37.037 0.00 0.00 37.43 2.57
2015 2073 8.233190 CACTGGAAGAGTTATTTTCAGTTCATC 58.767 37.037 0.00 0.00 37.43 2.92
2023 2081 9.950680 GAGTTATTTTCAGTTCATCACAAAAGA 57.049 29.630 0.00 0.00 0.00 2.52
2028 2086 9.874205 ATTTTCAGTTCATCACAAAAGAAAAGA 57.126 25.926 0.00 0.00 37.22 2.52
2033 2091 9.787532 CAGTTCATCACAAAAGAAAAGAACTTA 57.212 29.630 0.00 0.00 41.55 2.24
2054 2112 9.675464 AACTTATTTTCAATTACCTCGGTATCA 57.325 29.630 0.00 0.00 0.00 2.15
2055 2113 9.847224 ACTTATTTTCAATTACCTCGGTATCAT 57.153 29.630 0.00 0.00 0.00 2.45
2057 2115 6.935741 TTTTCAATTACCTCGGTATCATGG 57.064 37.500 0.00 0.00 0.00 3.66
2058 2116 4.002906 TCAATTACCTCGGTATCATGGC 57.997 45.455 0.00 0.00 0.00 4.40
2059 2117 3.074412 CAATTACCTCGGTATCATGGCC 58.926 50.000 0.00 0.00 0.00 5.36
2060 2118 1.796017 TTACCTCGGTATCATGGCCA 58.204 50.000 8.56 8.56 0.00 5.36
2061 2119 2.024176 TACCTCGGTATCATGGCCAT 57.976 50.000 14.09 14.09 0.00 4.40
2062 2120 0.397941 ACCTCGGTATCATGGCCATG 59.602 55.000 35.76 35.76 40.09 3.66
2072 2130 3.940209 TCATGGCCATGACTGTTTTTC 57.060 42.857 38.91 0.00 42.42 2.29
2073 2131 3.229293 TCATGGCCATGACTGTTTTTCA 58.771 40.909 38.91 17.23 42.42 2.69
2074 2132 3.640498 TCATGGCCATGACTGTTTTTCAA 59.360 39.130 38.91 16.72 42.42 2.69
2075 2133 4.283978 TCATGGCCATGACTGTTTTTCAAT 59.716 37.500 38.91 0.80 42.42 2.57
2076 2134 4.686191 TGGCCATGACTGTTTTTCAATT 57.314 36.364 0.00 0.00 0.00 2.32
2077 2135 4.630111 TGGCCATGACTGTTTTTCAATTC 58.370 39.130 0.00 0.00 0.00 2.17
2078 2136 3.996363 GGCCATGACTGTTTTTCAATTCC 59.004 43.478 0.00 0.00 0.00 3.01
2079 2137 4.262592 GGCCATGACTGTTTTTCAATTCCT 60.263 41.667 0.00 0.00 0.00 3.36
2080 2138 4.925646 GCCATGACTGTTTTTCAATTCCTC 59.074 41.667 0.00 0.00 0.00 3.71
2081 2139 5.156355 CCATGACTGTTTTTCAATTCCTCG 58.844 41.667 0.00 0.00 0.00 4.63
2082 2140 4.223320 TGACTGTTTTTCAATTCCTCGC 57.777 40.909 0.00 0.00 0.00 5.03
2083 2141 3.629855 TGACTGTTTTTCAATTCCTCGCA 59.370 39.130 0.00 0.00 0.00 5.10
2084 2142 4.097135 TGACTGTTTTTCAATTCCTCGCAA 59.903 37.500 0.00 0.00 0.00 4.85
2099 2157 3.853831 TCGCAAACGATAACTGTCCTA 57.146 42.857 0.00 0.00 45.12 2.94
2186 2244 2.880268 CCATGAAAGCAGACAGTTGACA 59.120 45.455 0.00 0.00 0.00 3.58
2201 2260 5.527582 ACAGTTGACACAGGTACAATCTTTC 59.472 40.000 0.00 0.00 0.00 2.62
2202 2261 5.049405 CAGTTGACACAGGTACAATCTTTCC 60.049 44.000 0.00 0.00 0.00 3.13
2211 2270 8.765219 CACAGGTACAATCTTTCCTAATATTCG 58.235 37.037 0.00 0.00 0.00 3.34
2218 2277 9.125026 ACAATCTTTCCTAATATTCGAATGCTT 57.875 29.630 20.87 15.19 0.00 3.91
2246 2312 4.100279 AGTTTTAGTTTGTCTCAGGGGG 57.900 45.455 0.00 0.00 0.00 5.40
2258 2324 4.601857 TGTCTCAGGGGGTTCTTTTCTAAT 59.398 41.667 0.00 0.00 0.00 1.73
2259 2325 4.944317 GTCTCAGGGGGTTCTTTTCTAATG 59.056 45.833 0.00 0.00 0.00 1.90
2260 2326 4.849810 TCTCAGGGGGTTCTTTTCTAATGA 59.150 41.667 0.00 0.00 0.00 2.57
2263 2329 4.944317 CAGGGGGTTCTTTTCTAATGAGAC 59.056 45.833 0.00 0.00 0.00 3.36
2264 2330 4.601857 AGGGGGTTCTTTTCTAATGAGACA 59.398 41.667 0.00 0.00 0.00 3.41
2267 2333 7.129504 AGGGGGTTCTTTTCTAATGAGACATAT 59.870 37.037 0.00 0.00 0.00 1.78
2294 2360 8.807667 ATCTCACTTATTTTTGTTGCTTTGAG 57.192 30.769 0.00 0.00 0.00 3.02
2296 2362 6.872920 TCACTTATTTTTGTTGCTTTGAGGT 58.127 32.000 0.00 0.00 0.00 3.85
2304 2370 4.662468 TGTTGCTTTGAGGTTTTATGCA 57.338 36.364 0.00 0.00 0.00 3.96
2307 2373 2.029110 TGCTTTGAGGTTTTATGCAGGC 60.029 45.455 0.00 0.00 0.00 4.85
2318 2384 5.126384 GGTTTTATGCAGGCTAACCAATACA 59.874 40.000 14.42 0.00 38.46 2.29
2321 2387 7.416964 TTTATGCAGGCTAACCAATACAATT 57.583 32.000 0.00 0.00 39.06 2.32
2337 2404 9.581099 CCAATACAATTACAACTAAACCAATCC 57.419 33.333 0.00 0.00 0.00 3.01
2357 2424 8.324306 CCAATCCTATCATGTGTGTATCCTAAT 58.676 37.037 0.00 0.00 0.00 1.73
2397 2464 9.474313 TTTTCTTAGGTGTATGGCTTTTATGAT 57.526 29.630 0.00 0.00 0.00 2.45
2457 2524 5.401550 CGGTATTGCACTGATGTTTTTGAT 58.598 37.500 0.00 0.00 35.28 2.57
2475 2542 8.349983 GTTTTTGATTACCTTACTCTTTCAGCA 58.650 33.333 0.00 0.00 0.00 4.41
2510 2577 7.604927 TGGCACAGTAAGTTATGTTAGGTAAAG 59.395 37.037 0.00 0.00 0.00 1.85
2512 2579 9.211485 GCACAGTAAGTTATGTTAGGTAAAGAA 57.789 33.333 0.00 0.00 0.00 2.52
2530 2597 9.152595 GGTAAAGAAGTTAAGTCCTATGTTCAG 57.847 37.037 0.00 0.00 0.00 3.02
2537 2604 8.083828 AGTTAAGTCCTATGTTCAGATGATGT 57.916 34.615 0.00 0.00 0.00 3.06
2541 2608 8.723942 AAGTCCTATGTTCAGATGATGTTAAC 57.276 34.615 0.00 0.00 0.00 2.01
2560 2627 9.884636 ATGTTAACTCATACTTAGTAACATGCA 57.115 29.630 7.22 0.00 34.11 3.96
2561 2628 9.884636 TGTTAACTCATACTTAGTAACATGCAT 57.115 29.630 7.22 0.00 0.00 3.96
2563 2630 9.884636 TTAACTCATACTTAGTAACATGCATGT 57.115 29.630 26.61 26.61 44.20 3.21
2594 2661 0.692476 TCCTCTGTGTTCATGGTGGG 59.308 55.000 0.00 0.00 0.00 4.61
2631 2698 3.067106 CGCACAGTTGATCAGGTTAGTT 58.933 45.455 0.00 0.00 0.00 2.24
2637 2704 7.413438 GCACAGTTGATCAGGTTAGTTATTCTG 60.413 40.741 0.00 0.00 0.00 3.02
2659 2726 4.462483 TGTTCACTTTTGGCTCATATTCCC 59.538 41.667 0.00 0.00 0.00 3.97
2684 2751 6.803320 CGAATTGATGCTTTCATTTACACTGT 59.197 34.615 0.00 0.00 33.34 3.55
2685 2752 7.007725 CGAATTGATGCTTTCATTTACACTGTC 59.992 37.037 0.00 0.00 33.34 3.51
2686 2753 5.627499 TGATGCTTTCATTTACACTGTCC 57.373 39.130 0.00 0.00 31.96 4.02
2794 2875 1.004862 GCCCCTTTGAGTAGCTTCCTT 59.995 52.381 0.00 0.00 0.00 3.36
2797 2878 3.498661 CCCCTTTGAGTAGCTTCCTTTGT 60.499 47.826 0.00 0.00 0.00 2.83
2808 2889 4.758688 AGCTTCCTTTGTTTGTTTGAAGG 58.241 39.130 0.00 0.00 39.97 3.46
2815 2896 5.105513 CCTTTGTTTGTTTGAAGGGTGTACT 60.106 40.000 0.00 0.00 35.98 2.73
2816 2897 6.095720 CCTTTGTTTGTTTGAAGGGTGTACTA 59.904 38.462 0.00 0.00 35.98 1.82
2817 2898 7.363094 CCTTTGTTTGTTTGAAGGGTGTACTAA 60.363 37.037 0.00 0.00 35.98 2.24
2818 2899 7.463961 TTGTTTGTTTGAAGGGTGTACTAAA 57.536 32.000 0.00 0.00 0.00 1.85
2819 2900 6.854778 TGTTTGTTTGAAGGGTGTACTAAAC 58.145 36.000 0.00 0.00 0.00 2.01
2820 2901 6.433404 TGTTTGTTTGAAGGGTGTACTAAACA 59.567 34.615 0.00 0.00 36.56 2.83
2821 2902 6.687081 TTGTTTGAAGGGTGTACTAAACAG 57.313 37.500 0.00 0.00 39.29 3.16
2822 2903 5.991861 TGTTTGAAGGGTGTACTAAACAGA 58.008 37.500 0.00 0.00 39.29 3.41
2823 2904 5.818857 TGTTTGAAGGGTGTACTAAACAGAC 59.181 40.000 0.00 0.00 39.29 3.51
2824 2905 5.881923 TTGAAGGGTGTACTAAACAGACT 57.118 39.130 0.00 0.00 39.29 3.24
2825 2906 6.982160 TTGAAGGGTGTACTAAACAGACTA 57.018 37.500 0.00 0.00 39.29 2.59
2826 2907 7.549147 TTGAAGGGTGTACTAAACAGACTAT 57.451 36.000 0.00 0.00 39.29 2.12
2827 2908 7.549147 TGAAGGGTGTACTAAACAGACTATT 57.451 36.000 0.00 0.00 39.29 1.73
2828 2909 8.654485 TGAAGGGTGTACTAAACAGACTATTA 57.346 34.615 0.00 0.00 39.29 0.98
2829 2910 9.092338 TGAAGGGTGTACTAAACAGACTATTAA 57.908 33.333 0.00 0.00 39.29 1.40
2853 2934 7.993821 ATCAGTAGTACGATCAGAAAATGTG 57.006 36.000 0.00 0.00 0.00 3.21
2855 2936 7.027760 TCAGTAGTACGATCAGAAAATGTGTC 58.972 38.462 0.00 0.00 0.00 3.67
2856 2937 7.030165 CAGTAGTACGATCAGAAAATGTGTCT 58.970 38.462 0.00 0.00 0.00 3.41
2859 2940 6.692486 AGTACGATCAGAAAATGTGTCTCTT 58.308 36.000 0.00 0.00 0.00 2.85
2860 2941 7.827701 AGTACGATCAGAAAATGTGTCTCTTA 58.172 34.615 0.00 0.00 0.00 2.10
2861 2942 7.971168 AGTACGATCAGAAAATGTGTCTCTTAG 59.029 37.037 0.00 0.00 0.00 2.18
2865 2946 7.219917 CGATCAGAAAATGTGTCTCTTAGAGTC 59.780 40.741 9.25 4.31 0.00 3.36
2867 2948 7.957002 TCAGAAAATGTGTCTCTTAGAGTCTT 58.043 34.615 9.25 0.00 0.00 3.01
2868 2949 9.078990 TCAGAAAATGTGTCTCTTAGAGTCTTA 57.921 33.333 9.25 0.00 0.00 2.10
2869 2950 9.352784 CAGAAAATGTGTCTCTTAGAGTCTTAG 57.647 37.037 9.25 0.00 0.00 2.18
2870 2951 8.527810 AGAAAATGTGTCTCTTAGAGTCTTAGG 58.472 37.037 9.25 0.00 0.00 2.69
2871 2952 6.783708 AATGTGTCTCTTAGAGTCTTAGGG 57.216 41.667 9.25 2.96 0.00 3.53
2872 2953 4.017808 TGTGTCTCTTAGAGTCTTAGGGC 58.982 47.826 9.25 0.83 0.00 5.19
2873 2954 3.382227 GTGTCTCTTAGAGTCTTAGGGCC 59.618 52.174 9.25 0.00 0.00 5.80
2874 2955 3.011369 TGTCTCTTAGAGTCTTAGGGCCA 59.989 47.826 6.18 0.00 0.00 5.36
2875 2956 3.634910 GTCTCTTAGAGTCTTAGGGCCAG 59.365 52.174 6.18 0.00 0.00 4.85
2876 2957 3.269906 TCTCTTAGAGTCTTAGGGCCAGT 59.730 47.826 6.18 0.00 0.00 4.00
2879 2960 2.632763 AGAGTCTTAGGGCCAGTTCT 57.367 50.000 6.18 0.82 0.00 3.01
2880 2961 2.909217 AGAGTCTTAGGGCCAGTTCTT 58.091 47.619 6.18 0.00 0.00 2.52
2881 2962 3.252351 AGAGTCTTAGGGCCAGTTCTTT 58.748 45.455 6.18 0.00 0.00 2.52
2883 2964 3.753797 GAGTCTTAGGGCCAGTTCTTTTG 59.246 47.826 6.18 0.00 0.00 2.44
2884 2965 3.138468 AGTCTTAGGGCCAGTTCTTTTGT 59.862 43.478 6.18 0.00 0.00 2.83
2885 2966 4.349930 AGTCTTAGGGCCAGTTCTTTTGTA 59.650 41.667 6.18 0.00 0.00 2.41
2886 2967 4.695928 GTCTTAGGGCCAGTTCTTTTGTAG 59.304 45.833 6.18 0.00 0.00 2.74
2887 2968 1.911057 AGGGCCAGTTCTTTTGTAGC 58.089 50.000 6.18 0.00 0.00 3.58
2888 2969 1.425448 AGGGCCAGTTCTTTTGTAGCT 59.575 47.619 6.18 0.00 0.00 3.32
2889 2970 2.158460 AGGGCCAGTTCTTTTGTAGCTT 60.158 45.455 6.18 0.00 0.00 3.74
2890 2971 3.073946 AGGGCCAGTTCTTTTGTAGCTTA 59.926 43.478 6.18 0.00 0.00 3.09
2891 2972 4.017126 GGGCCAGTTCTTTTGTAGCTTAT 58.983 43.478 4.39 0.00 0.00 1.73
2892 2973 4.462834 GGGCCAGTTCTTTTGTAGCTTATT 59.537 41.667 4.39 0.00 0.00 1.40
2893 2974 5.047306 GGGCCAGTTCTTTTGTAGCTTATTT 60.047 40.000 4.39 0.00 0.00 1.40
2894 2975 5.863935 GGCCAGTTCTTTTGTAGCTTATTTG 59.136 40.000 0.00 0.00 0.00 2.32
2895 2976 5.863935 GCCAGTTCTTTTGTAGCTTATTTGG 59.136 40.000 0.00 0.00 0.00 3.28
2896 2977 6.516693 GCCAGTTCTTTTGTAGCTTATTTGGT 60.517 38.462 0.00 0.00 0.00 3.67
2897 2978 7.308951 GCCAGTTCTTTTGTAGCTTATTTGGTA 60.309 37.037 0.00 0.00 0.00 3.25
2898 2979 8.021396 CCAGTTCTTTTGTAGCTTATTTGGTAC 58.979 37.037 0.00 0.00 40.22 3.34
2899 2980 8.784043 CAGTTCTTTTGTAGCTTATTTGGTACT 58.216 33.333 0.00 0.00 40.39 2.73
2900 2981 8.784043 AGTTCTTTTGTAGCTTATTTGGTACTG 58.216 33.333 0.00 0.00 40.39 2.74
2901 2982 8.565416 GTTCTTTTGTAGCTTATTTGGTACTGT 58.435 33.333 0.00 0.00 40.39 3.55
2902 2983 8.094798 TCTTTTGTAGCTTATTTGGTACTGTG 57.905 34.615 0.00 0.00 40.39 3.66
2903 2984 6.811253 TTTGTAGCTTATTTGGTACTGTGG 57.189 37.500 0.00 0.00 40.39 4.17
2904 2985 5.748670 TGTAGCTTATTTGGTACTGTGGA 57.251 39.130 0.00 0.00 40.39 4.02
2905 2986 6.116711 TGTAGCTTATTTGGTACTGTGGAA 57.883 37.500 0.00 0.00 40.39 3.53
2906 2987 6.535540 TGTAGCTTATTTGGTACTGTGGAAA 58.464 36.000 0.00 0.00 40.39 3.13
2907 2988 7.172342 TGTAGCTTATTTGGTACTGTGGAAAT 58.828 34.615 0.00 0.00 40.39 2.17
2908 2989 8.322828 TGTAGCTTATTTGGTACTGTGGAAATA 58.677 33.333 0.00 0.00 40.39 1.40
2909 2990 9.169592 GTAGCTTATTTGGTACTGTGGAAATAA 57.830 33.333 0.00 0.00 37.77 1.40
2910 2991 8.281212 AGCTTATTTGGTACTGTGGAAATAAG 57.719 34.615 21.56 21.56 44.23 1.73
2912 2993 8.281212 CTTATTTGGTACTGTGGAAATAAGCT 57.719 34.615 17.93 0.00 39.59 3.74
2913 2994 9.391006 CTTATTTGGTACTGTGGAAATAAGCTA 57.609 33.333 17.93 0.00 39.59 3.32
2914 2995 7.625828 ATTTGGTACTGTGGAAATAAGCTAC 57.374 36.000 0.00 0.00 0.00 3.58
2915 2996 5.093849 TGGTACTGTGGAAATAAGCTACC 57.906 43.478 0.00 0.00 0.00 3.18
2916 2997 4.532916 TGGTACTGTGGAAATAAGCTACCA 59.467 41.667 0.00 0.00 31.92 3.25
2922 3003 4.449131 GTGGAAATAAGCTACCACCTACC 58.551 47.826 0.00 0.00 44.59 3.18
2923 3004 3.457012 TGGAAATAAGCTACCACCTACCC 59.543 47.826 0.00 0.00 0.00 3.69
2924 3005 3.457012 GGAAATAAGCTACCACCTACCCA 59.543 47.826 0.00 0.00 0.00 4.51
2925 3006 4.444449 GGAAATAAGCTACCACCTACCCAG 60.444 50.000 0.00 0.00 0.00 4.45
2926 3007 1.492764 TAAGCTACCACCTACCCAGC 58.507 55.000 0.00 0.00 0.00 4.85
2927 3008 0.252742 AAGCTACCACCTACCCAGCT 60.253 55.000 0.00 0.00 44.21 4.24
2928 3009 0.252742 AGCTACCACCTACCCAGCTT 60.253 55.000 0.00 0.00 39.49 3.74
2929 3010 1.007963 AGCTACCACCTACCCAGCTTA 59.992 52.381 0.00 0.00 39.49 3.09
2930 3011 2.047830 GCTACCACCTACCCAGCTTAT 58.952 52.381 0.00 0.00 0.00 1.73
2931 3012 2.438392 GCTACCACCTACCCAGCTTATT 59.562 50.000 0.00 0.00 0.00 1.40
2932 3013 3.494573 GCTACCACCTACCCAGCTTATTC 60.495 52.174 0.00 0.00 0.00 1.75
2933 3014 2.846950 ACCACCTACCCAGCTTATTCT 58.153 47.619 0.00 0.00 0.00 2.40
2934 3015 4.003584 ACCACCTACCCAGCTTATTCTA 57.996 45.455 0.00 0.00 0.00 2.10
2935 3016 3.967987 ACCACCTACCCAGCTTATTCTAG 59.032 47.826 0.00 0.00 0.00 2.43
2936 3017 4.223953 CCACCTACCCAGCTTATTCTAGA 58.776 47.826 0.00 0.00 0.00 2.43
2937 3018 4.654262 CCACCTACCCAGCTTATTCTAGAA 59.346 45.833 7.82 7.82 0.00 2.10
2938 3019 5.221541 CCACCTACCCAGCTTATTCTAGAAG 60.222 48.000 11.53 0.00 0.00 2.85
2950 3031 8.494016 GCTTATTCTAGAAGCTCAACCTAAAA 57.506 34.615 11.53 0.00 44.83 1.52
2951 3032 9.114952 GCTTATTCTAGAAGCTCAACCTAAAAT 57.885 33.333 11.53 0.00 44.83 1.82
2980 3061 7.803487 TTTTAGAAGCCTAGTAGTTAACCCT 57.197 36.000 0.88 1.25 0.00 4.34
2981 3062 7.803487 TTTAGAAGCCTAGTAGTTAACCCTT 57.197 36.000 0.88 0.00 0.00 3.95
2982 3063 8.899887 TTTAGAAGCCTAGTAGTTAACCCTTA 57.100 34.615 0.88 0.00 0.00 2.69
2983 3064 8.899887 TTAGAAGCCTAGTAGTTAACCCTTAA 57.100 34.615 0.88 0.00 0.00 1.85
2984 3065 7.991647 AGAAGCCTAGTAGTTAACCCTTAAT 57.008 36.000 0.88 0.00 0.00 1.40
2985 3066 8.389979 AGAAGCCTAGTAGTTAACCCTTAATT 57.610 34.615 0.88 0.00 0.00 1.40
2986 3067 9.498039 AGAAGCCTAGTAGTTAACCCTTAATTA 57.502 33.333 0.88 0.00 0.00 1.40
2987 3068 9.761504 GAAGCCTAGTAGTTAACCCTTAATTAG 57.238 37.037 0.88 0.00 0.00 1.73
2988 3069 8.851106 AGCCTAGTAGTTAACCCTTAATTAGT 57.149 34.615 0.88 0.00 0.00 2.24
2989 3070 9.942526 AGCCTAGTAGTTAACCCTTAATTAGTA 57.057 33.333 0.88 0.00 0.00 1.82
2993 3074 8.851106 AGTAGTTAACCCTTAATTAGTAGGCT 57.149 34.615 0.88 0.00 0.00 4.58
2994 3075 9.276791 AGTAGTTAACCCTTAATTAGTAGGCTT 57.723 33.333 0.88 0.00 0.00 4.35
2995 3076 9.896645 GTAGTTAACCCTTAATTAGTAGGCTTT 57.103 33.333 0.88 0.00 0.00 3.51
3031 3112 8.451908 TTTTAGATTGGGCTTCTAGAATTAGC 57.548 34.615 5.44 5.98 0.00 3.09
3032 3113 5.903198 AGATTGGGCTTCTAGAATTAGCT 57.097 39.130 13.28 0.00 35.30 3.32
3033 3114 5.619220 AGATTGGGCTTCTAGAATTAGCTG 58.381 41.667 13.28 0.00 35.30 4.24
3034 3115 3.845781 TGGGCTTCTAGAATTAGCTGG 57.154 47.619 13.28 0.00 35.30 4.85
3035 3116 2.439507 TGGGCTTCTAGAATTAGCTGGG 59.560 50.000 13.28 0.00 35.30 4.45
3036 3117 2.439880 GGGCTTCTAGAATTAGCTGGGT 59.560 50.000 13.28 0.00 35.30 4.51
3037 3118 3.646637 GGGCTTCTAGAATTAGCTGGGTA 59.353 47.826 13.28 0.00 35.30 3.69
3038 3119 4.262678 GGGCTTCTAGAATTAGCTGGGTAG 60.263 50.000 13.28 0.00 35.30 3.18
3039 3120 4.262678 GGCTTCTAGAATTAGCTGGGTAGG 60.263 50.000 13.28 0.00 35.30 3.18
3040 3121 4.262678 GCTTCTAGAATTAGCTGGGTAGGG 60.263 50.000 5.44 0.00 32.26 3.53
3041 3122 3.858135 TCTAGAATTAGCTGGGTAGGGG 58.142 50.000 0.00 0.00 0.00 4.79
3042 3123 1.821088 AGAATTAGCTGGGTAGGGGG 58.179 55.000 0.00 0.00 0.00 5.40
3043 3124 0.110678 GAATTAGCTGGGTAGGGGGC 59.889 60.000 0.00 0.00 0.00 5.80
3044 3125 0.626277 AATTAGCTGGGTAGGGGGCA 60.626 55.000 0.00 0.00 0.00 5.36
3045 3126 1.062488 ATTAGCTGGGTAGGGGGCAG 61.062 60.000 0.00 0.00 0.00 4.85
3048 3129 3.017581 CTGGGTAGGGGGCAGCTT 61.018 66.667 0.00 0.00 0.00 3.74
3049 3130 1.692749 CTGGGTAGGGGGCAGCTTA 60.693 63.158 0.00 0.00 0.00 3.09
3050 3131 1.005556 TGGGTAGGGGGCAGCTTAT 59.994 57.895 0.00 0.00 0.00 1.73
3051 3132 0.626277 TGGGTAGGGGGCAGCTTATT 60.626 55.000 0.00 0.00 0.00 1.40
3052 3133 0.556258 GGGTAGGGGGCAGCTTATTT 59.444 55.000 0.00 0.00 0.00 1.40
3053 3134 1.478837 GGGTAGGGGGCAGCTTATTTC 60.479 57.143 0.00 0.00 0.00 2.17
3054 3135 1.478837 GGTAGGGGGCAGCTTATTTCC 60.479 57.143 0.00 0.00 0.00 3.13
3055 3136 1.214424 GTAGGGGGCAGCTTATTTCCA 59.786 52.381 0.00 0.00 0.00 3.53
3056 3137 0.033109 AGGGGGCAGCTTATTTCCAC 60.033 55.000 0.00 0.00 0.00 4.02
3057 3138 0.324275 GGGGGCAGCTTATTTCCACA 60.324 55.000 0.00 0.00 0.00 4.17
3058 3139 1.106285 GGGGCAGCTTATTTCCACAG 58.894 55.000 0.00 0.00 0.00 3.66
3059 3140 0.457443 GGGCAGCTTATTTCCACAGC 59.543 55.000 0.00 0.00 0.00 4.40
3060 3141 0.457443 GGCAGCTTATTTCCACAGCC 59.543 55.000 0.00 0.00 33.73 4.85
3061 3142 0.457443 GCAGCTTATTTCCACAGCCC 59.543 55.000 0.00 0.00 33.73 5.19
3062 3143 1.106285 CAGCTTATTTCCACAGCCCC 58.894 55.000 0.00 0.00 33.73 5.80
3063 3144 0.704076 AGCTTATTTCCACAGCCCCA 59.296 50.000 0.00 0.00 33.73 4.96
3064 3145 1.077005 AGCTTATTTCCACAGCCCCAA 59.923 47.619 0.00 0.00 33.73 4.12
3065 3146 1.899142 GCTTATTTCCACAGCCCCAAA 59.101 47.619 0.00 0.00 0.00 3.28
3066 3147 2.501316 GCTTATTTCCACAGCCCCAAAT 59.499 45.455 0.00 0.00 0.00 2.32
3067 3148 3.679639 GCTTATTTCCACAGCCCCAAATG 60.680 47.826 0.00 0.00 0.00 2.32
3068 3149 2.323999 ATTTCCACAGCCCCAAATGA 57.676 45.000 0.00 0.00 0.00 2.57
3069 3150 1.631405 TTTCCACAGCCCCAAATGAG 58.369 50.000 0.00 0.00 0.00 2.90
3070 3151 0.899717 TTCCACAGCCCCAAATGAGC 60.900 55.000 0.00 0.00 0.00 4.26
3071 3152 2.353610 CCACAGCCCCAAATGAGCC 61.354 63.158 0.00 0.00 0.00 4.70
3072 3153 1.607178 CACAGCCCCAAATGAGCCA 60.607 57.895 0.00 0.00 0.00 4.75
3073 3154 1.607467 ACAGCCCCAAATGAGCCAC 60.607 57.895 0.00 0.00 0.00 5.01
3074 3155 1.607178 CAGCCCCAAATGAGCCACA 60.607 57.895 0.00 0.00 0.00 4.17
3075 3156 1.155859 AGCCCCAAATGAGCCACAA 59.844 52.632 0.00 0.00 0.00 3.33
3076 3157 0.471591 AGCCCCAAATGAGCCACAAA 60.472 50.000 0.00 0.00 0.00 2.83
3077 3158 0.396060 GCCCCAAATGAGCCACAAAA 59.604 50.000 0.00 0.00 0.00 2.44
3078 3159 1.608801 GCCCCAAATGAGCCACAAAAG 60.609 52.381 0.00 0.00 0.00 2.27
3079 3160 1.969923 CCCCAAATGAGCCACAAAAGA 59.030 47.619 0.00 0.00 0.00 2.52
3080 3161 2.368221 CCCCAAATGAGCCACAAAAGAA 59.632 45.455 0.00 0.00 0.00 2.52
3081 3162 3.555586 CCCCAAATGAGCCACAAAAGAAG 60.556 47.826 0.00 0.00 0.00 2.85
3082 3163 3.070015 CCCAAATGAGCCACAAAAGAAGT 59.930 43.478 0.00 0.00 0.00 3.01
3083 3164 4.053295 CCAAATGAGCCACAAAAGAAGTG 58.947 43.478 0.00 0.00 36.76 3.16
3084 3165 4.441913 CCAAATGAGCCACAAAAGAAGTGT 60.442 41.667 0.00 0.00 35.24 3.55
3085 3166 5.221224 CCAAATGAGCCACAAAAGAAGTGTA 60.221 40.000 0.00 0.00 35.24 2.90
3093 3174 5.065474 GCCACAAAAGAAGTGTACTGTTGTA 59.935 40.000 0.00 0.00 41.89 2.41
3105 3186 6.818644 AGTGTACTGTTGTATTCATGTGGATC 59.181 38.462 0.00 0.00 0.00 3.36
3120 3201 4.332828 TGTGGATCGTCTTCTGTTAGAGA 58.667 43.478 0.00 0.00 0.00 3.10
3121 3202 4.156190 TGTGGATCGTCTTCTGTTAGAGAC 59.844 45.833 0.00 0.00 0.00 3.36
3122 3203 4.396790 GTGGATCGTCTTCTGTTAGAGACT 59.603 45.833 0.00 0.00 0.00 3.24
3123 3204 5.010933 TGGATCGTCTTCTGTTAGAGACTT 58.989 41.667 0.00 0.00 0.00 3.01
3124 3205 6.093771 GTGGATCGTCTTCTGTTAGAGACTTA 59.906 42.308 0.00 0.00 0.00 2.24
3125 3206 6.316640 TGGATCGTCTTCTGTTAGAGACTTAG 59.683 42.308 0.00 0.00 0.00 2.18
3126 3207 6.539464 GGATCGTCTTCTGTTAGAGACTTAGA 59.461 42.308 0.00 0.00 0.00 2.10
3127 3208 6.971527 TCGTCTTCTGTTAGAGACTTAGAG 57.028 41.667 0.00 0.00 0.00 2.43
3145 3226 9.856488 GACTTAGAGTCATCTTTGTTATACACA 57.144 33.333 3.33 0.00 44.45 3.72
3150 3231 9.167311 AGAGTCATCTTTGTTATACACATTTCC 57.833 33.333 0.00 0.00 34.43 3.13
3151 3232 9.167311 GAGTCATCTTTGTTATACACATTTCCT 57.833 33.333 0.00 0.00 34.43 3.36
3160 3241 6.370442 TGTTATACACATTTCCTTTCGGTGAG 59.630 38.462 0.00 0.00 33.82 3.51
3168 3249 8.028938 CACATTTCCTTTCGGTGAGAAAAATAT 58.971 33.333 0.00 0.00 46.98 1.28
3173 3254 8.857694 TCCTTTCGGTGAGAAAAATATACTTT 57.142 30.769 0.00 0.00 46.98 2.66
3174 3255 8.943002 TCCTTTCGGTGAGAAAAATATACTTTC 58.057 33.333 3.15 3.15 46.98 2.62
3177 3258 8.624367 TTCGGTGAGAAAAATATACTTTCCAA 57.376 30.769 6.59 0.00 35.61 3.53
3179 3260 7.881232 TCGGTGAGAAAAATATACTTTCCAACT 59.119 33.333 6.59 0.00 34.00 3.16
3204 3285 9.472361 CTGTACATATATGTAAAGCGGTAGTTT 57.528 33.333 23.93 0.22 44.11 2.66
3205 3286 9.467258 TGTACATATATGTAAAGCGGTAGTTTC 57.533 33.333 23.88 9.80 44.11 2.78
3206 3287 9.467258 GTACATATATGTAAAGCGGTAGTTTCA 57.533 33.333 23.88 0.00 44.11 2.69
3209 3290 6.861065 ATATGTAAAGCGGTAGTTTCATGG 57.139 37.500 0.00 0.00 0.00 3.66
3223 3304 6.919775 AGTTTCATGGAACTACTCAGTACT 57.080 37.500 18.20 0.00 38.06 2.73
3224 3305 6.926313 AGTTTCATGGAACTACTCAGTACTC 58.074 40.000 18.20 0.00 38.06 2.59
3225 3306 6.493802 AGTTTCATGGAACTACTCAGTACTCA 59.506 38.462 18.20 0.00 38.06 3.41
3226 3307 5.899120 TCATGGAACTACTCAGTACTCAC 57.101 43.478 0.00 0.00 33.48 3.51
3231 3312 3.977134 ACTACTCAGTACTCACGGAGA 57.023 47.619 13.34 0.00 46.38 3.71
3233 3314 4.846040 ACTACTCAGTACTCACGGAGAAT 58.154 43.478 13.34 0.00 46.38 2.40
3234 3315 4.877251 ACTACTCAGTACTCACGGAGAATC 59.123 45.833 13.34 0.00 46.38 2.52
3239 3320 4.634883 TCAGTACTCACGGAGAATCACTAC 59.365 45.833 7.76 0.34 36.25 2.73
3240 3321 3.946558 AGTACTCACGGAGAATCACTACC 59.053 47.826 7.76 0.00 36.25 3.18
3246 3327 5.687780 TCACGGAGAATCACTACCTGTATA 58.312 41.667 0.00 0.00 36.25 1.47
3255 3336 9.277783 AGAATCACTACCTGTATATGATTTTGC 57.722 33.333 13.73 6.22 39.49 3.68
3258 3339 9.632638 ATCACTACCTGTATATGATTTTGCTTT 57.367 29.630 0.00 0.00 0.00 3.51
3259 3340 9.461312 TCACTACCTGTATATGATTTTGCTTTT 57.539 29.630 0.00 0.00 0.00 2.27
3288 3369 8.692710 TGTTATATGAGACTGGATCGTTTAAGT 58.307 33.333 0.00 0.00 0.00 2.24
3316 3397 4.262851 GCCCAGTGAAATACCAAACCAAAT 60.263 41.667 0.00 0.00 0.00 2.32
3317 3398 5.237048 CCCAGTGAAATACCAAACCAAATG 58.763 41.667 0.00 0.00 0.00 2.32
3327 3408 4.128643 ACCAAACCAAATGTGCAAATCTG 58.871 39.130 0.00 0.00 0.00 2.90
3330 3411 5.470777 CCAAACCAAATGTGCAAATCTGATT 59.529 36.000 0.00 0.00 0.00 2.57
3335 3416 7.765307 ACCAAATGTGCAAATCTGATTAGTAG 58.235 34.615 2.85 0.00 0.00 2.57
3340 3421 9.630098 AATGTGCAAATCTGATTAGTAGTTTTG 57.370 29.630 2.85 0.00 37.66 2.44
3417 3498 6.778821 TCATGAAGGACCTTTTTGTGATCTA 58.221 36.000 8.49 0.00 0.00 1.98
3526 3607 4.516698 AGGTATGGCATATTGCTCTTTTCG 59.483 41.667 10.92 0.00 44.28 3.46
3544 3625 2.766313 TCGTTTCAGGTTGTCTCCATG 58.234 47.619 0.00 0.00 0.00 3.66
3549 3630 5.305585 GTTTCAGGTTGTCTCCATGTAAGA 58.694 41.667 0.00 0.00 0.00 2.10
3560 3641 8.547967 TGTCTCCATGTAAGATTTTTACTGAC 57.452 34.615 0.00 0.00 0.00 3.51
3700 3781 4.558226 AGCTCTCCATTTACACATGTCA 57.442 40.909 0.00 0.00 0.00 3.58
3973 4063 5.634020 ACTTTCAAGAAATCGTTCCTACTCG 59.366 40.000 0.00 0.00 33.92 4.18
4027 4117 8.380867 TCTTGAGTCTATCGGTGAGGTATATAA 58.619 37.037 0.00 0.00 0.00 0.98
4211 4301 3.676049 CGCTCCTGTATTTCTGTGCACTA 60.676 47.826 19.41 3.10 0.00 2.74
4217 4307 6.539826 TCCTGTATTTCTGTGCACTATTGATG 59.460 38.462 19.41 1.06 0.00 3.07
4289 4380 8.682936 ATTAAGCAAGTTAATATGACCTGAGG 57.317 34.615 0.00 0.00 39.21 3.86
4307 4398 5.130145 CCTGAGGTTCTGAGAAGGAACATAT 59.870 44.000 0.00 0.00 43.20 1.78
4360 4451 1.228245 ACAGGCGAATGTGGCTTGT 60.228 52.632 0.00 0.00 44.57 3.16
4386 4477 3.457610 AACAAATGAACTGGTGCCTTG 57.542 42.857 0.00 0.00 0.00 3.61
4404 4495 6.547510 GTGCCTTGTATCTTTCCCTGATAAAT 59.452 38.462 0.00 0.00 0.00 1.40
4456 4554 7.286316 ACAATCTCCATTCAATTCCCTAATGTC 59.714 37.037 0.00 0.00 0.00 3.06
4476 4574 2.025155 CGCAGTACCTGATACTCCTGT 58.975 52.381 0.00 0.00 42.62 4.00
4552 4650 3.260884 TGTCATCTTTAGTGGGGACTGAC 59.739 47.826 0.00 0.00 33.97 3.51
4572 4670 6.071952 ACTGACTATGCCACCTTTTGTATTTG 60.072 38.462 0.00 0.00 0.00 2.32
4573 4671 6.007076 TGACTATGCCACCTTTTGTATTTGA 58.993 36.000 0.00 0.00 0.00 2.69
4574 4672 6.663093 TGACTATGCCACCTTTTGTATTTGAT 59.337 34.615 0.00 0.00 0.00 2.57
4575 4673 7.100458 ACTATGCCACCTTTTGTATTTGATC 57.900 36.000 0.00 0.00 0.00 2.92
4577 4675 5.999205 TGCCACCTTTTGTATTTGATCAT 57.001 34.783 0.00 0.00 0.00 2.45
4581 4679 8.370940 TGCCACCTTTTGTATTTGATCATTTTA 58.629 29.630 0.00 0.00 0.00 1.52
4628 4726 5.294060 GCAGGAAAGAGATGTCAAGATCTTC 59.706 44.000 4.57 0.00 32.57 2.87
4629 4727 6.404708 CAGGAAAGAGATGTCAAGATCTTCA 58.595 40.000 4.57 1.81 32.57 3.02
4640 4740 4.019858 TCAAGATCTTCACAGAGACGGAT 58.980 43.478 4.57 0.00 30.36 4.18
4652 4752 2.232452 AGAGACGGATGAGAACAACCAG 59.768 50.000 0.00 0.00 38.62 4.00
4707 4807 5.701224 TCCTTTGACCTCCTTTGTACATTT 58.299 37.500 0.00 0.00 0.00 2.32
4734 4836 1.792367 GGCGATTTTCACTTTTGGTGC 59.208 47.619 0.00 0.00 44.98 5.01
4856 4980 3.071479 GTTTTGTCCTTCATCGCCTGTA 58.929 45.455 0.00 0.00 0.00 2.74
4869 4995 2.366266 TCGCCTGTACACACCTAAGTTT 59.634 45.455 0.00 0.00 0.00 2.66
4876 5002 7.820872 GCCTGTACACACCTAAGTTTAATTCTA 59.179 37.037 0.00 0.00 0.00 2.10
4877 5003 9.367444 CCTGTACACACCTAAGTTTAATTCTAG 57.633 37.037 0.00 0.00 0.00 2.43
4878 5004 9.924650 CTGTACACACCTAAGTTTAATTCTAGT 57.075 33.333 0.00 0.00 0.00 2.57
4959 5091 4.558470 GGATGAAATATTGTTGTGTGTGCG 59.442 41.667 0.00 0.00 0.00 5.34
4963 5095 0.179015 TATTGTTGTGTGTGCGGGGT 60.179 50.000 0.00 0.00 0.00 4.95
4967 5102 0.519961 GTTGTGTGTGCGGGGTATTC 59.480 55.000 0.00 0.00 0.00 1.75
4968 5103 0.108774 TTGTGTGTGCGGGGTATTCA 59.891 50.000 0.00 0.00 0.00 2.57
5001 5136 1.000283 AGTCAGCCGAAGAACTCTGTG 60.000 52.381 0.00 0.00 0.00 3.66
5037 5172 2.620863 CGGCGAACGCAATTAACAC 58.379 52.632 20.16 0.22 44.11 3.32
5041 5176 2.603652 GGCGAACGCAATTAACACTTGT 60.604 45.455 20.16 0.00 44.11 3.16
5045 5180 4.551990 CGAACGCAATTAACACTTGTGAGT 60.552 41.667 7.83 0.00 37.50 3.41
5050 5185 5.156355 GCAATTAACACTTGTGAGTCATGG 58.844 41.667 7.83 0.00 32.54 3.66
5058 5193 4.682860 CACTTGTGAGTCATGGCATTTTTC 59.317 41.667 0.00 0.00 32.54 2.29
5086 5221 6.095300 TCTGAAGCTTGTTTCATTTCTTGTGA 59.905 34.615 2.10 0.00 36.55 3.58
5088 5223 4.614946 AGCTTGTTTCATTTCTTGTGAGC 58.385 39.130 0.00 0.00 0.00 4.26
5089 5224 4.098349 AGCTTGTTTCATTTCTTGTGAGCA 59.902 37.500 0.00 0.00 0.00 4.26
5114 5257 7.065085 CAGTAATTCAGTAACAGATGGGTCTTG 59.935 40.741 0.00 0.00 30.42 3.02
5134 5280 2.604174 CCGCACTGGAAACCGTGAC 61.604 63.158 13.52 6.87 42.00 3.67
5142 5288 0.391597 GGAAACCGTGACCTGTCTGA 59.608 55.000 0.00 0.00 0.00 3.27
5167 5313 6.648310 ACAACACAGATTCACTGAGATGTAAG 59.352 38.462 0.00 0.00 45.31 2.34
5213 5369 2.531206 GAAACTCTTCGACCGAGATGG 58.469 52.381 15.66 0.00 46.41 3.51
5229 5385 3.569491 AGATGGGAATTCGCCAATTCAT 58.431 40.909 18.80 5.15 46.94 2.57
5232 5393 1.480205 GGAATTCGCCAATTCATGCG 58.520 50.000 17.01 7.10 46.94 4.73
5235 5396 5.569008 GGAATTCGCCAATTCATGCGTCA 62.569 47.826 17.01 3.24 46.94 4.35
5295 5456 2.037511 CCAAGCTGCCTCATTTCCAAAA 59.962 45.455 0.00 0.00 0.00 2.44
5322 5483 5.199982 TCTAGTTCTCTCCTCCTGATGTT 57.800 43.478 0.00 0.00 0.00 2.71
5324 5485 6.123651 TCTAGTTCTCTCCTCCTGATGTTAC 58.876 44.000 0.00 0.00 0.00 2.50
5336 5497 1.922447 TGATGTTACTGGCCCAGGAAT 59.078 47.619 12.59 0.00 36.63 3.01
5359 5520 4.218312 AGCAGAAAACTCCCATGTTCTTT 58.782 39.130 0.00 0.00 0.00 2.52
5361 5522 4.037923 GCAGAAAACTCCCATGTTCTTTCA 59.962 41.667 0.00 0.00 0.00 2.69
5383 5544 4.003648 AGACCATCGAAAACTCCATGTTC 58.996 43.478 0.00 0.00 38.03 3.18
5399 5560 0.582005 GTTCAGACGCTGTCACCAAC 59.418 55.000 10.52 6.58 34.60 3.77
5405 5566 0.932399 ACGCTGTCACCAACGTAAAC 59.068 50.000 0.00 0.00 41.28 2.01
5408 5569 2.796031 CGCTGTCACCAACGTAAACTAA 59.204 45.455 0.00 0.00 0.00 2.24
5409 5570 3.245754 CGCTGTCACCAACGTAAACTAAA 59.754 43.478 0.00 0.00 0.00 1.85
5412 5573 6.346758 CGCTGTCACCAACGTAAACTAAAATA 60.347 38.462 0.00 0.00 0.00 1.40
5413 5574 7.013529 GCTGTCACCAACGTAAACTAAAATAG 58.986 38.462 0.00 0.00 0.00 1.73
5414 5575 6.890558 TGTCACCAACGTAAACTAAAATAGC 58.109 36.000 0.00 0.00 0.00 2.97
5449 5610 4.961511 TCACCGCAGCGACACACC 62.962 66.667 18.75 0.00 0.00 4.16
5475 5760 1.550524 CTGACTCCACGAGAAATCCCA 59.449 52.381 0.00 0.00 33.32 4.37
5497 5782 3.402681 GCTGGAGGCTGGCAGGTA 61.403 66.667 17.64 0.00 38.06 3.08
5498 5783 2.906458 CTGGAGGCTGGCAGGTAG 59.094 66.667 17.64 0.00 0.00 3.18
5568 5910 3.262405 AGAACGTATTTAACCTGGCCTCA 59.738 43.478 3.32 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 0.527565 CAAAATTGGGGAGCTCACCG 59.472 55.000 29.64 10.79 44.25 4.94
62 63 2.519013 AGTCAAAATTGGGGAGCTCAC 58.481 47.619 17.19 12.85 0.00 3.51
63 64 2.978156 AGTCAAAATTGGGGAGCTCA 57.022 45.000 17.19 0.00 0.00 4.26
70 71 4.670896 ACAGTCCAAAGTCAAAATTGGG 57.329 40.909 4.83 0.00 44.99 4.12
75 76 4.527509 TTGCAACAGTCCAAAGTCAAAA 57.472 36.364 0.00 0.00 0.00 2.44
78 79 4.460263 AGTATTGCAACAGTCCAAAGTCA 58.540 39.130 0.00 0.00 0.00 3.41
87 88 6.942576 AGGATCAAAACTAGTATTGCAACAGT 59.057 34.615 0.00 0.00 0.00 3.55
88 89 7.383102 AGGATCAAAACTAGTATTGCAACAG 57.617 36.000 0.00 0.00 0.00 3.16
89 90 7.309133 CCAAGGATCAAAACTAGTATTGCAACA 60.309 37.037 0.00 0.00 0.00 3.33
90 91 7.029563 CCAAGGATCAAAACTAGTATTGCAAC 58.970 38.462 0.00 0.00 0.00 4.17
91 92 6.152661 CCCAAGGATCAAAACTAGTATTGCAA 59.847 38.462 0.00 0.00 0.00 4.08
92 93 5.652014 CCCAAGGATCAAAACTAGTATTGCA 59.348 40.000 0.00 0.00 0.00 4.08
93 94 5.450550 GCCCAAGGATCAAAACTAGTATTGC 60.451 44.000 0.00 0.00 0.00 3.56
94 95 5.888161 AGCCCAAGGATCAAAACTAGTATTG 59.112 40.000 0.00 0.00 0.00 1.90
95 96 5.888161 CAGCCCAAGGATCAAAACTAGTATT 59.112 40.000 0.00 0.00 0.00 1.89
96 97 5.044846 ACAGCCCAAGGATCAAAACTAGTAT 60.045 40.000 0.00 0.00 0.00 2.12
97 98 4.288626 ACAGCCCAAGGATCAAAACTAGTA 59.711 41.667 0.00 0.00 0.00 1.82
98 99 3.074538 ACAGCCCAAGGATCAAAACTAGT 59.925 43.478 0.00 0.00 0.00 2.57
99 100 3.690460 ACAGCCCAAGGATCAAAACTAG 58.310 45.455 0.00 0.00 0.00 2.57
100 101 3.806949 ACAGCCCAAGGATCAAAACTA 57.193 42.857 0.00 0.00 0.00 2.24
101 102 2.629617 CAACAGCCCAAGGATCAAAACT 59.370 45.455 0.00 0.00 0.00 2.66
102 103 2.867647 GCAACAGCCCAAGGATCAAAAC 60.868 50.000 0.00 0.00 0.00 2.43
103 104 1.344114 GCAACAGCCCAAGGATCAAAA 59.656 47.619 0.00 0.00 0.00 2.44
104 105 0.968405 GCAACAGCCCAAGGATCAAA 59.032 50.000 0.00 0.00 0.00 2.69
105 106 0.178967 TGCAACAGCCCAAGGATCAA 60.179 50.000 0.00 0.00 0.00 2.57
106 107 0.178967 TTGCAACAGCCCAAGGATCA 60.179 50.000 0.00 0.00 0.00 2.92
107 108 1.188863 ATTGCAACAGCCCAAGGATC 58.811 50.000 0.00 0.00 0.00 3.36
108 109 2.102578 GTATTGCAACAGCCCAAGGAT 58.897 47.619 0.00 0.00 0.00 3.24
109 110 1.075374 AGTATTGCAACAGCCCAAGGA 59.925 47.619 0.00 0.00 0.00 3.36
110 111 1.549203 AGTATTGCAACAGCCCAAGG 58.451 50.000 0.00 0.00 0.00 3.61
111 112 3.347216 ACTAGTATTGCAACAGCCCAAG 58.653 45.455 0.00 0.00 0.00 3.61
112 113 3.433306 ACTAGTATTGCAACAGCCCAA 57.567 42.857 0.00 0.00 0.00 4.12
113 114 3.433306 AACTAGTATTGCAACAGCCCA 57.567 42.857 0.00 0.00 0.00 5.36
114 115 3.756434 TCAAACTAGTATTGCAACAGCCC 59.244 43.478 0.00 0.00 0.00 5.19
115 116 5.449177 GGATCAAACTAGTATTGCAACAGCC 60.449 44.000 0.00 0.00 0.00 4.85
116 117 5.449177 GGGATCAAACTAGTATTGCAACAGC 60.449 44.000 0.00 0.00 0.00 4.40
117 118 5.882557 AGGGATCAAACTAGTATTGCAACAG 59.117 40.000 0.00 0.00 0.00 3.16
160 161 2.571216 CCGGACTTCTCCACACCGT 61.571 63.158 0.00 0.00 41.67 4.83
161 162 2.261671 CCGGACTTCTCCACACCG 59.738 66.667 0.00 0.00 42.67 4.94
178 179 2.352032 ACTCGGTCTAGCAGGTGGC 61.352 63.158 0.00 0.00 45.30 5.01
196 197 3.534970 GAATTGCACACACGGCGCA 62.535 57.895 10.83 0.00 0.00 6.09
218 219 2.426023 GTCTGCCTCCACCACGTT 59.574 61.111 0.00 0.00 0.00 3.99
222 223 2.997315 CCTCGTCTGCCTCCACCA 60.997 66.667 0.00 0.00 0.00 4.17
224 225 1.679305 TCTCCTCGTCTGCCTCCAC 60.679 63.158 0.00 0.00 0.00 4.02
233 234 2.457366 AACATGGTTGTCTCCTCGTC 57.543 50.000 0.00 0.00 34.06 4.20
242 243 6.463995 TTTCTTCTGCTTTAACATGGTTGT 57.536 33.333 0.00 0.00 37.82 3.32
295 296 2.187599 AAAGCGCTGGTGACGATTGC 62.188 55.000 12.58 0.00 38.32 3.56
297 298 0.238289 CAAAAGCGCTGGTGACGATT 59.762 50.000 12.58 0.00 41.49 3.34
299 300 2.892334 GCAAAAGCGCTGGTGACGA 61.892 57.895 21.36 0.00 0.00 4.20
327 329 1.466856 TCAGGGAAGTGATGCAATGC 58.533 50.000 0.00 0.00 0.00 3.56
332 334 4.074970 TCTTTCTTTCAGGGAAGTGATGC 58.925 43.478 0.00 0.00 0.00 3.91
370 373 0.388391 ATGGCGCGACAAATTGTTGG 60.388 50.000 23.46 6.51 39.22 3.77
426 431 0.107508 AATGAGTGGATGAGGCGGTG 60.108 55.000 0.00 0.00 0.00 4.94
458 463 7.339976 TGTCAATGGATGAGCAAATCAAAGATA 59.660 33.333 1.63 0.00 42.53 1.98
489 494 2.786495 CCGGACATCGAGGAGGTGG 61.786 68.421 3.06 0.00 42.43 4.61
516 521 7.598759 ACGATCTAGATGGTTAATGGTAACT 57.401 36.000 14.06 0.00 39.73 2.24
525 530 3.035363 TGGCCAACGATCTAGATGGTTA 58.965 45.455 26.58 13.00 37.59 2.85
557 562 2.270434 AGGGTAGAGAATGAGGGCAA 57.730 50.000 0.00 0.00 0.00 4.52
578 583 3.576982 AGGAGACGAAACATACAAGGTGA 59.423 43.478 0.00 0.00 0.00 4.02
580 585 4.562963 GGAAGGAGACGAAACATACAAGGT 60.563 45.833 0.00 0.00 0.00 3.50
584 589 3.119602 CGAGGAAGGAGACGAAACATACA 60.120 47.826 0.00 0.00 0.00 2.29
585 590 3.119566 ACGAGGAAGGAGACGAAACATAC 60.120 47.826 0.00 0.00 0.00 2.39
598 603 4.310769 GGATACATCAATGACGAGGAAGG 58.689 47.826 0.00 0.00 0.00 3.46
625 630 0.400213 AGTCTTGGGGATTGAACGCA 59.600 50.000 0.00 0.00 0.00 5.24
652 663 6.089283 TCGAAAAATGTATGCTTCAAACATGC 59.911 34.615 0.00 0.00 34.20 4.06
663 674 8.183830 TGAATTTCCATTCGAAAAATGTATGC 57.816 30.769 0.00 0.00 43.61 3.14
668 679 8.242085 TGTGATGAATTTCCATTCGAAAAATG 57.758 30.769 0.00 0.00 43.61 2.32
669 680 9.090692 GATGTGATGAATTTCCATTCGAAAAAT 57.909 29.630 0.00 0.81 43.61 1.82
717 728 9.213777 TCTCCATTTAGCCTCTTTCTTATAGAA 57.786 33.333 0.00 0.00 31.28 2.10
719 730 9.487790 CTTCTCCATTTAGCCTCTTTCTTATAG 57.512 37.037 0.00 0.00 0.00 1.31
720 731 8.432805 CCTTCTCCATTTAGCCTCTTTCTTATA 58.567 37.037 0.00 0.00 0.00 0.98
721 732 7.127955 TCCTTCTCCATTTAGCCTCTTTCTTAT 59.872 37.037 0.00 0.00 0.00 1.73
722 733 6.443849 TCCTTCTCCATTTAGCCTCTTTCTTA 59.556 38.462 0.00 0.00 0.00 2.10
725 736 5.104259 TCCTTCTCCATTTAGCCTCTTTC 57.896 43.478 0.00 0.00 0.00 2.62
729 740 4.080863 TCACTTCCTTCTCCATTTAGCCTC 60.081 45.833 0.00 0.00 0.00 4.70
730 741 3.846588 TCACTTCCTTCTCCATTTAGCCT 59.153 43.478 0.00 0.00 0.00 4.58
731 742 3.942115 GTCACTTCCTTCTCCATTTAGCC 59.058 47.826 0.00 0.00 0.00 3.93
732 743 4.633565 CAGTCACTTCCTTCTCCATTTAGC 59.366 45.833 0.00 0.00 0.00 3.09
733 744 5.181748 CCAGTCACTTCCTTCTCCATTTAG 58.818 45.833 0.00 0.00 0.00 1.85
734 745 4.565652 GCCAGTCACTTCCTTCTCCATTTA 60.566 45.833 0.00 0.00 0.00 1.40
740 751 0.687354 TGGCCAGTCACTTCCTTCTC 59.313 55.000 0.00 0.00 0.00 2.87
759 770 2.034066 CGTTGGCCCCACATGTCT 59.966 61.111 0.00 0.00 0.00 3.41
876 899 1.295020 TCGATCCAATCAAAGGGGGT 58.705 50.000 0.00 0.00 0.00 4.95
879 902 5.132897 TGTTTTTCGATCCAATCAAAGGG 57.867 39.130 0.00 0.00 0.00 3.95
989 1012 0.744414 CAAATCCATGTCGCCGGAGT 60.744 55.000 5.05 0.00 33.97 3.85
999 1022 3.501062 CGATCCACAGATCCAAATCCATG 59.499 47.826 0.00 0.00 45.32 3.66
1175 1201 1.548357 CCACCACTCAGACCTCCAGG 61.548 65.000 0.00 0.00 42.17 4.45
1177 1203 2.217038 GCCACCACTCAGACCTCCA 61.217 63.158 0.00 0.00 0.00 3.86
1186 1212 1.227943 TGAACAGCAGCCACCACTC 60.228 57.895 0.00 0.00 0.00 3.51
1227 1262 0.612229 CCACACAGAGGAGCATCAGT 59.388 55.000 0.00 0.00 36.25 3.41
1246 1281 3.888930 TCCTTCACCTGAAATGGTTTCAC 59.111 43.478 1.24 0.00 44.21 3.18
1424 1465 6.812160 CAGTCCAGTATAAGACACCAAACTAC 59.188 42.308 0.00 0.00 35.38 2.73
1425 1466 6.070995 CCAGTCCAGTATAAGACACCAAACTA 60.071 42.308 0.00 0.00 35.38 2.24
1426 1467 5.280011 CCAGTCCAGTATAAGACACCAAACT 60.280 44.000 0.00 0.00 35.38 2.66
1525 1569 4.041444 AGAAGCAGAAGAATGGTGAAGACT 59.959 41.667 0.00 0.00 0.00 3.24
1585 1629 5.856126 CGGAGCAAGTACAGTCATTTAAA 57.144 39.130 0.00 0.00 0.00 1.52
1612 1656 8.638873 TGAGATTCAAGTACCGTACATGATAAT 58.361 33.333 15.40 8.57 36.44 1.28
1623 1673 8.873215 AGTATGTTAATGAGATTCAAGTACCG 57.127 34.615 0.00 0.00 0.00 4.02
1733 1786 6.381420 ACCACAGCATACTAGTGAATTAGAGT 59.619 38.462 5.39 0.00 35.33 3.24
1734 1787 6.810911 ACCACAGCATACTAGTGAATTAGAG 58.189 40.000 5.39 0.00 35.33 2.43
1735 1788 6.379988 TGACCACAGCATACTAGTGAATTAGA 59.620 38.462 5.39 0.00 35.33 2.10
1736 1789 6.573434 TGACCACAGCATACTAGTGAATTAG 58.427 40.000 5.39 0.00 35.33 1.73
1737 1790 6.154534 ACTGACCACAGCATACTAGTGAATTA 59.845 38.462 5.39 0.00 46.95 1.40
1744 1797 4.662468 ATCACTGACCACAGCATACTAG 57.338 45.455 0.00 0.00 46.95 2.57
1756 1809 2.161012 CACATGTGCTGAATCACTGACC 59.839 50.000 13.94 0.00 37.81 4.02
1872 1925 9.807649 GATTTTATTAAGCATGAGTCAATGGTT 57.192 29.630 17.81 17.81 46.82 3.67
1874 1927 9.674824 GAGATTTTATTAAGCATGAGTCAATGG 57.325 33.333 0.00 0.00 0.00 3.16
1877 1930 9.671279 TGAGAGATTTTATTAAGCATGAGTCAA 57.329 29.630 0.00 0.00 0.00 3.18
1879 1932 8.281893 GCTGAGAGATTTTATTAAGCATGAGTC 58.718 37.037 0.00 0.00 0.00 3.36
1880 1933 7.772292 TGCTGAGAGATTTTATTAAGCATGAGT 59.228 33.333 0.00 0.00 34.68 3.41
1926 1980 7.067008 AGTGCTAACCGTTATTTCAGCAATATT 59.933 33.333 7.14 0.00 40.41 1.28
1933 1987 5.856126 TTCAGTGCTAACCGTTATTTCAG 57.144 39.130 0.00 0.00 0.00 3.02
1934 1988 8.500753 AATATTCAGTGCTAACCGTTATTTCA 57.499 30.769 0.00 0.00 0.00 2.69
1935 1989 9.434559 GAAATATTCAGTGCTAACCGTTATTTC 57.565 33.333 0.00 0.00 0.00 2.17
1938 1992 7.769044 ACAGAAATATTCAGTGCTAACCGTTAT 59.231 33.333 0.00 0.00 0.00 1.89
1939 1993 7.101054 ACAGAAATATTCAGTGCTAACCGTTA 58.899 34.615 0.00 0.00 0.00 3.18
1940 1994 5.938125 ACAGAAATATTCAGTGCTAACCGTT 59.062 36.000 0.00 0.00 0.00 4.44
1941 1995 5.488341 ACAGAAATATTCAGTGCTAACCGT 58.512 37.500 0.00 0.00 0.00 4.83
1942 1996 6.422776 AACAGAAATATTCAGTGCTAACCG 57.577 37.500 0.00 0.00 29.27 4.44
1948 2002 6.183360 TGGATTCGAACAGAAATATTCAGTGC 60.183 38.462 0.00 0.00 42.91 4.40
1983 2037 4.773323 AATAACTCTTCCAGTGCAAAGC 57.227 40.909 0.00 0.00 34.56 3.51
1993 2047 8.099364 TGTGATGAACTGAAAATAACTCTTCC 57.901 34.615 0.00 0.00 0.00 3.46
2006 2060 8.055279 AGTTCTTTTCTTTTGTGATGAACTGA 57.945 30.769 0.00 0.00 40.54 3.41
2007 2061 8.693542 AAGTTCTTTTCTTTTGTGATGAACTG 57.306 30.769 0.00 0.00 40.98 3.16
2023 2081 9.908152 CCGAGGTAATTGAAAATAAGTTCTTTT 57.092 29.630 0.00 0.00 0.00 2.27
2024 2082 9.074576 ACCGAGGTAATTGAAAATAAGTTCTTT 57.925 29.630 0.00 0.00 0.00 2.52
2025 2083 8.631480 ACCGAGGTAATTGAAAATAAGTTCTT 57.369 30.769 0.00 0.00 0.00 2.52
2028 2086 9.675464 TGATACCGAGGTAATTGAAAATAAGTT 57.325 29.630 6.04 0.00 33.99 2.66
2033 2091 6.016276 GCCATGATACCGAGGTAATTGAAAAT 60.016 38.462 6.04 0.00 33.99 1.82
2034 2092 5.298276 GCCATGATACCGAGGTAATTGAAAA 59.702 40.000 6.04 0.00 33.99 2.29
2041 2099 1.796017 TGGCCATGATACCGAGGTAA 58.204 50.000 0.00 0.00 33.99 2.85
2044 2102 0.686789 TCATGGCCATGATACCGAGG 59.313 55.000 38.91 15.29 42.42 4.63
2054 2112 4.895668 ATTGAAAAACAGTCATGGCCAT 57.104 36.364 14.09 14.09 0.00 4.40
2055 2113 4.502950 GGAATTGAAAAACAGTCATGGCCA 60.503 41.667 8.56 8.56 0.00 5.36
2056 2114 3.996363 GGAATTGAAAAACAGTCATGGCC 59.004 43.478 0.00 0.00 0.00 5.36
2057 2115 4.886579 AGGAATTGAAAAACAGTCATGGC 58.113 39.130 0.00 0.00 0.00 4.40
2058 2116 5.156355 CGAGGAATTGAAAAACAGTCATGG 58.844 41.667 0.00 0.00 0.00 3.66
2059 2117 4.618489 GCGAGGAATTGAAAAACAGTCATG 59.382 41.667 0.00 0.00 0.00 3.07
2060 2118 4.278170 TGCGAGGAATTGAAAAACAGTCAT 59.722 37.500 0.00 0.00 0.00 3.06
2061 2119 3.629855 TGCGAGGAATTGAAAAACAGTCA 59.370 39.130 0.00 0.00 0.00 3.41
2062 2120 4.223320 TGCGAGGAATTGAAAAACAGTC 57.777 40.909 0.00 0.00 0.00 3.51
2063 2121 4.647424 TTGCGAGGAATTGAAAAACAGT 57.353 36.364 0.00 0.00 0.00 3.55
2064 2122 4.085619 CGTTTGCGAGGAATTGAAAAACAG 60.086 41.667 0.00 0.00 41.33 3.16
2065 2123 3.794028 CGTTTGCGAGGAATTGAAAAACA 59.206 39.130 0.00 0.00 41.33 2.83
2066 2124 4.039032 TCGTTTGCGAGGAATTGAAAAAC 58.961 39.130 0.00 0.00 42.81 2.43
2067 2125 4.294416 TCGTTTGCGAGGAATTGAAAAA 57.706 36.364 0.00 0.00 42.81 1.94
2068 2126 3.972950 TCGTTTGCGAGGAATTGAAAA 57.027 38.095 0.00 0.00 42.81 2.29
2080 2138 4.804139 AGAATAGGACAGTTATCGTTTGCG 59.196 41.667 0.00 0.00 39.92 4.85
2081 2139 7.948278 ATAGAATAGGACAGTTATCGTTTGC 57.052 36.000 0.00 0.00 0.00 3.68
2111 2169 9.125026 GGATACCTAATGACAGTCATGAAAATT 57.875 33.333 17.11 3.53 37.15 1.82
2113 2171 7.770433 CAGGATACCTAATGACAGTCATGAAAA 59.230 37.037 17.11 2.95 35.09 2.29
2122 2180 2.705658 TGGCCAGGATACCTAATGACAG 59.294 50.000 0.00 0.00 29.64 3.51
2124 2182 2.438021 TGTGGCCAGGATACCTAATGAC 59.562 50.000 5.11 0.00 29.64 3.06
2162 2220 3.565482 TCAACTGTCTGCTTTCATGGTTC 59.435 43.478 0.00 0.00 0.00 3.62
2186 2244 8.701895 TCGAATATTAGGAAAGATTGTACCTGT 58.298 33.333 0.00 0.00 34.42 4.00
2222 2281 6.066032 CCCCCTGAGACAAACTAAAACTAAA 58.934 40.000 0.00 0.00 0.00 1.85
2225 2284 3.462205 ACCCCCTGAGACAAACTAAAACT 59.538 43.478 0.00 0.00 0.00 2.66
2226 2285 3.828921 ACCCCCTGAGACAAACTAAAAC 58.171 45.455 0.00 0.00 0.00 2.43
2242 2308 4.918588 TGTCTCATTAGAAAAGAACCCCC 58.081 43.478 0.00 0.00 32.16 5.40
2274 2340 8.560355 AAAACCTCAAAGCAACAAAAATAAGT 57.440 26.923 0.00 0.00 0.00 2.24
2281 2347 5.423015 TGCATAAAACCTCAAAGCAACAAA 58.577 33.333 0.00 0.00 0.00 2.83
2283 2349 4.501229 CCTGCATAAAACCTCAAAGCAACA 60.501 41.667 0.00 0.00 0.00 3.33
2284 2350 3.989817 CCTGCATAAAACCTCAAAGCAAC 59.010 43.478 0.00 0.00 0.00 4.17
2294 2360 4.736126 ATTGGTTAGCCTGCATAAAACC 57.264 40.909 11.46 11.46 40.03 3.27
2296 2362 6.842437 TTGTATTGGTTAGCCTGCATAAAA 57.158 33.333 0.00 0.00 35.27 1.52
2304 2370 9.523168 TTTAGTTGTAATTGTATTGGTTAGCCT 57.477 29.630 0.00 0.00 35.27 4.58
2321 2387 8.325787 ACACATGATAGGATTGGTTTAGTTGTA 58.674 33.333 0.00 0.00 0.00 2.41
2366 2433 7.833285 AAGCCATACACCTAAGAAAAGAAAA 57.167 32.000 0.00 0.00 0.00 2.29
2370 2437 8.956426 TCATAAAAGCCATACACCTAAGAAAAG 58.044 33.333 0.00 0.00 0.00 2.27
2372 2439 8.902806 CATCATAAAAGCCATACACCTAAGAAA 58.097 33.333 0.00 0.00 0.00 2.52
2373 2440 8.271458 TCATCATAAAAGCCATACACCTAAGAA 58.729 33.333 0.00 0.00 0.00 2.52
2374 2441 7.801104 TCATCATAAAAGCCATACACCTAAGA 58.199 34.615 0.00 0.00 0.00 2.10
2375 2442 7.716998 ACTCATCATAAAAGCCATACACCTAAG 59.283 37.037 0.00 0.00 0.00 2.18
2382 2449 6.763135 TCTGACACTCATCATAAAAGCCATAC 59.237 38.462 0.00 0.00 0.00 2.39
2388 2455 7.102346 ACTTCCTCTGACACTCATCATAAAAG 58.898 38.462 0.00 0.00 0.00 2.27
2397 2464 3.099905 CCCATACTTCCTCTGACACTCA 58.900 50.000 0.00 0.00 0.00 3.41
2457 2524 9.733556 TTAATGATTGCTGAAAGAGTAAGGTAA 57.266 29.630 0.00 0.00 34.07 2.85
2472 2539 5.653769 ACTTACTGTGCCATTAATGATTGCT 59.346 36.000 17.23 0.00 0.00 3.91
2475 2542 9.189156 ACATAACTTACTGTGCCATTAATGATT 57.811 29.630 17.23 0.00 0.00 2.57
2503 2570 8.877195 TGAACATAGGACTTAACTTCTTTACCT 58.123 33.333 0.00 0.00 0.00 3.08
2504 2571 9.152595 CTGAACATAGGACTTAACTTCTTTACC 57.847 37.037 0.00 0.00 0.00 2.85
2510 2577 9.039870 CATCATCTGAACATAGGACTTAACTTC 57.960 37.037 0.00 0.00 0.00 3.01
2512 2579 8.083828 ACATCATCTGAACATAGGACTTAACT 57.916 34.615 0.00 0.00 0.00 2.24
2537 2604 9.884636 ACATGCATGTTACTAAGTATGAGTTAA 57.115 29.630 26.61 0.00 37.90 2.01
2558 2625 6.017605 CACAGAGGACCTAAATATCAACATGC 60.018 42.308 0.00 0.00 0.00 4.06
2560 2627 7.200434 ACACAGAGGACCTAAATATCAACAT 57.800 36.000 0.00 0.00 0.00 2.71
2561 2628 6.620877 ACACAGAGGACCTAAATATCAACA 57.379 37.500 0.00 0.00 0.00 3.33
2562 2629 7.103641 TGAACACAGAGGACCTAAATATCAAC 58.896 38.462 0.00 0.00 0.00 3.18
2563 2630 7.252612 TGAACACAGAGGACCTAAATATCAA 57.747 36.000 0.00 0.00 0.00 2.57
2564 2631 6.867519 TGAACACAGAGGACCTAAATATCA 57.132 37.500 0.00 0.00 0.00 2.15
2565 2632 6.708054 CCATGAACACAGAGGACCTAAATATC 59.292 42.308 0.00 0.00 0.00 1.63
2594 2661 1.128692 GTGCGTACATCAGGTGAAAGC 59.871 52.381 0.00 0.00 0.00 3.51
2631 2698 8.579850 AATATGAGCCAAAAGTGAACAGAATA 57.420 30.769 0.00 0.00 0.00 1.75
2637 2704 4.438744 CGGGAATATGAGCCAAAAGTGAAC 60.439 45.833 0.00 0.00 0.00 3.18
2659 2726 6.803320 ACAGTGTAAATGAAAGCATCAATTCG 59.197 34.615 0.00 0.00 42.54 3.34
2685 2752 9.442047 GGATAACTATATCTTGATTTCACCAGG 57.558 37.037 0.00 0.00 38.39 4.45
2758 2839 6.838090 TCAAAGGGGCATTATATGATTGAACA 59.162 34.615 0.00 0.00 0.00 3.18
2769 2850 4.464947 GAAGCTACTCAAAGGGGCATTAT 58.535 43.478 0.00 0.00 0.00 1.28
2775 2856 3.084786 CAAAGGAAGCTACTCAAAGGGG 58.915 50.000 0.00 0.00 0.00 4.79
2794 2875 7.039923 TGTTTAGTACACCCTTCAAACAAACAA 60.040 33.333 0.00 0.00 34.09 2.83
2797 2878 6.885376 TCTGTTTAGTACACCCTTCAAACAAA 59.115 34.615 0.00 0.00 35.97 2.83
2818 2899 9.557061 TGATCGTACTACTGATTAATAGTCTGT 57.443 33.333 1.53 1.53 33.65 3.41
2820 2901 9.999660 TCTGATCGTACTACTGATTAATAGTCT 57.000 33.333 0.00 0.00 33.65 3.24
2827 2908 9.516314 CACATTTTCTGATCGTACTACTGATTA 57.484 33.333 0.00 0.00 0.00 1.75
2828 2909 8.035394 ACACATTTTCTGATCGTACTACTGATT 58.965 33.333 0.00 0.00 0.00 2.57
2829 2910 7.548097 ACACATTTTCTGATCGTACTACTGAT 58.452 34.615 0.00 0.00 0.00 2.90
2830 2911 6.920817 ACACATTTTCTGATCGTACTACTGA 58.079 36.000 0.00 0.00 0.00 3.41
2837 2918 8.051901 TCTAAGAGACACATTTTCTGATCGTA 57.948 34.615 0.00 0.00 0.00 3.43
2839 2920 7.032580 ACTCTAAGAGACACATTTTCTGATCG 58.967 38.462 0.00 0.00 33.32 3.69
2840 2921 8.250332 AGACTCTAAGAGACACATTTTCTGATC 58.750 37.037 0.00 0.00 33.32 2.92
2845 2926 7.762159 CCCTAAGACTCTAAGAGACACATTTTC 59.238 40.741 0.00 0.00 33.32 2.29
2851 2932 3.382227 GGCCCTAAGACTCTAAGAGACAC 59.618 52.174 0.00 0.00 33.32 3.67
2852 2933 3.011369 TGGCCCTAAGACTCTAAGAGACA 59.989 47.826 0.00 0.00 33.32 3.41
2853 2934 3.633418 TGGCCCTAAGACTCTAAGAGAC 58.367 50.000 0.00 0.00 33.32 3.36
2855 2936 3.637769 ACTGGCCCTAAGACTCTAAGAG 58.362 50.000 0.00 0.00 35.52 2.85
2856 2937 3.759815 ACTGGCCCTAAGACTCTAAGA 57.240 47.619 0.00 0.00 0.00 2.10
2859 2940 3.759815 AGAACTGGCCCTAAGACTCTA 57.240 47.619 0.00 0.00 0.00 2.43
2860 2941 2.632763 AGAACTGGCCCTAAGACTCT 57.367 50.000 0.00 0.00 0.00 3.24
2861 2942 3.704800 AAAGAACTGGCCCTAAGACTC 57.295 47.619 0.00 0.00 0.00 3.36
2865 2946 3.440522 GCTACAAAAGAACTGGCCCTAAG 59.559 47.826 0.00 0.00 0.00 2.18
2867 2948 2.642807 AGCTACAAAAGAACTGGCCCTA 59.357 45.455 0.00 0.00 0.00 3.53
2868 2949 1.425448 AGCTACAAAAGAACTGGCCCT 59.575 47.619 0.00 0.00 0.00 5.19
2869 2950 1.911057 AGCTACAAAAGAACTGGCCC 58.089 50.000 0.00 0.00 0.00 5.80
2870 2951 5.644977 AATAAGCTACAAAAGAACTGGCC 57.355 39.130 0.00 0.00 0.00 5.36
2871 2952 5.863935 CCAAATAAGCTACAAAAGAACTGGC 59.136 40.000 0.00 0.00 0.00 4.85
2872 2953 6.981722 ACCAAATAAGCTACAAAAGAACTGG 58.018 36.000 0.00 0.00 0.00 4.00
2873 2954 8.784043 AGTACCAAATAAGCTACAAAAGAACTG 58.216 33.333 0.00 0.00 0.00 3.16
2874 2955 8.784043 CAGTACCAAATAAGCTACAAAAGAACT 58.216 33.333 0.00 0.00 0.00 3.01
2875 2956 8.565416 ACAGTACCAAATAAGCTACAAAAGAAC 58.435 33.333 0.00 0.00 0.00 3.01
2876 2957 8.564574 CACAGTACCAAATAAGCTACAAAAGAA 58.435 33.333 0.00 0.00 0.00 2.52
2879 2960 6.999272 TCCACAGTACCAAATAAGCTACAAAA 59.001 34.615 0.00 0.00 0.00 2.44
2880 2961 6.535540 TCCACAGTACCAAATAAGCTACAAA 58.464 36.000 0.00 0.00 0.00 2.83
2881 2962 6.116711 TCCACAGTACCAAATAAGCTACAA 57.883 37.500 0.00 0.00 0.00 2.41
2883 2964 7.625828 ATTTCCACAGTACCAAATAAGCTAC 57.374 36.000 0.00 0.00 0.00 3.58
2884 2965 9.391006 CTTATTTCCACAGTACCAAATAAGCTA 57.609 33.333 13.13 0.00 39.84 3.32
2885 2966 8.281212 CTTATTTCCACAGTACCAAATAAGCT 57.719 34.615 13.13 0.00 39.84 3.74
2887 2968 8.281212 AGCTTATTTCCACAGTACCAAATAAG 57.719 34.615 17.36 17.36 44.50 1.73
2888 2969 9.169592 GTAGCTTATTTCCACAGTACCAAATAA 57.830 33.333 0.00 0.00 32.42 1.40
2889 2970 7.771826 GGTAGCTTATTTCCACAGTACCAAATA 59.228 37.037 0.00 0.00 30.91 1.40
2890 2971 6.602009 GGTAGCTTATTTCCACAGTACCAAAT 59.398 38.462 0.00 0.00 30.91 2.32
2891 2972 5.941647 GGTAGCTTATTTCCACAGTACCAAA 59.058 40.000 0.00 0.00 30.91 3.28
2892 2973 5.013287 TGGTAGCTTATTTCCACAGTACCAA 59.987 40.000 0.00 0.00 36.58 3.67
2893 2974 4.532916 TGGTAGCTTATTTCCACAGTACCA 59.467 41.667 0.00 0.00 37.05 3.25
2894 2975 4.874396 GTGGTAGCTTATTTCCACAGTACC 59.126 45.833 14.94 3.92 46.44 3.34
2900 2981 4.449131 GGTAGGTGGTAGCTTATTTCCAC 58.551 47.826 0.00 3.90 46.46 4.02
2901 2982 3.457012 GGGTAGGTGGTAGCTTATTTCCA 59.543 47.826 0.00 0.00 0.00 3.53
2902 2983 3.457012 TGGGTAGGTGGTAGCTTATTTCC 59.543 47.826 0.00 0.00 0.00 3.13
2903 2984 4.704965 CTGGGTAGGTGGTAGCTTATTTC 58.295 47.826 0.00 0.00 0.00 2.17
2904 2985 3.118000 GCTGGGTAGGTGGTAGCTTATTT 60.118 47.826 0.00 0.00 0.00 1.40
2905 2986 2.438392 GCTGGGTAGGTGGTAGCTTATT 59.562 50.000 0.00 0.00 0.00 1.40
2906 2987 2.047830 GCTGGGTAGGTGGTAGCTTAT 58.952 52.381 0.00 0.00 0.00 1.73
2907 2988 1.007963 AGCTGGGTAGGTGGTAGCTTA 59.992 52.381 0.00 0.00 41.60 3.09
2908 2989 0.252742 AGCTGGGTAGGTGGTAGCTT 60.253 55.000 0.00 0.00 41.60 3.74
2909 2990 0.252742 AAGCTGGGTAGGTGGTAGCT 60.253 55.000 0.00 0.00 45.87 3.32
2910 2991 1.492764 TAAGCTGGGTAGGTGGTAGC 58.507 55.000 0.00 0.00 34.27 3.58
2911 2992 3.967987 AGAATAAGCTGGGTAGGTGGTAG 59.032 47.826 0.00 0.00 34.27 3.18
2912 2993 4.003584 AGAATAAGCTGGGTAGGTGGTA 57.996 45.455 0.00 0.00 34.27 3.25
2913 2994 2.846950 AGAATAAGCTGGGTAGGTGGT 58.153 47.619 0.00 0.00 34.27 4.16
2914 2995 4.223953 TCTAGAATAAGCTGGGTAGGTGG 58.776 47.826 0.00 0.00 34.27 4.61
2915 2996 5.740513 GCTTCTAGAATAAGCTGGGTAGGTG 60.741 48.000 5.44 0.00 44.75 4.00
2916 2997 4.345547 GCTTCTAGAATAAGCTGGGTAGGT 59.654 45.833 5.44 0.00 44.75 3.08
2917 2998 4.888917 GCTTCTAGAATAAGCTGGGTAGG 58.111 47.826 5.44 0.00 44.75 3.18
2954 3035 9.498039 AGGGTTAACTACTAGGCTTCTAAAATA 57.502 33.333 5.42 0.00 0.00 1.40
2955 3036 8.389979 AGGGTTAACTACTAGGCTTCTAAAAT 57.610 34.615 5.42 0.00 0.00 1.82
2956 3037 7.803487 AGGGTTAACTACTAGGCTTCTAAAA 57.197 36.000 5.42 0.00 0.00 1.52
2957 3038 7.803487 AAGGGTTAACTACTAGGCTTCTAAA 57.197 36.000 5.42 0.00 0.00 1.85
2958 3039 8.899887 TTAAGGGTTAACTACTAGGCTTCTAA 57.100 34.615 5.42 0.00 0.00 2.10
2959 3040 9.498039 AATTAAGGGTTAACTACTAGGCTTCTA 57.502 33.333 5.42 0.00 0.00 2.10
2960 3041 7.991647 ATTAAGGGTTAACTACTAGGCTTCT 57.008 36.000 5.42 0.00 0.00 2.85
2961 3042 9.761504 CTAATTAAGGGTTAACTACTAGGCTTC 57.238 37.037 5.42 0.00 0.00 3.86
2962 3043 9.276791 ACTAATTAAGGGTTAACTACTAGGCTT 57.723 33.333 5.42 0.00 0.00 4.35
2963 3044 8.851106 ACTAATTAAGGGTTAACTACTAGGCT 57.149 34.615 5.42 0.00 0.00 4.58
2967 3048 9.942526 AGCCTACTAATTAAGGGTTAACTACTA 57.057 33.333 5.42 0.00 40.68 1.82
2968 3049 8.851106 AGCCTACTAATTAAGGGTTAACTACT 57.149 34.615 5.42 1.60 40.68 2.57
3005 3086 9.072375 GCTAATTCTAGAAGCCCAATCTAAAAT 57.928 33.333 11.53 0.00 0.00 1.82
3006 3087 8.275040 AGCTAATTCTAGAAGCCCAATCTAAAA 58.725 33.333 11.53 0.00 36.92 1.52
3007 3088 7.716998 CAGCTAATTCTAGAAGCCCAATCTAAA 59.283 37.037 11.53 0.00 36.92 1.85
3008 3089 7.220030 CAGCTAATTCTAGAAGCCCAATCTAA 58.780 38.462 11.53 0.00 36.92 2.10
3009 3090 6.239714 CCAGCTAATTCTAGAAGCCCAATCTA 60.240 42.308 11.53 0.00 36.92 1.98
3010 3091 5.455899 CCAGCTAATTCTAGAAGCCCAATCT 60.456 44.000 11.53 0.00 36.92 2.40
3011 3092 4.759183 CCAGCTAATTCTAGAAGCCCAATC 59.241 45.833 11.53 0.00 36.92 2.67
3012 3093 4.446889 CCCAGCTAATTCTAGAAGCCCAAT 60.447 45.833 11.53 0.00 36.92 3.16
3013 3094 3.117888 CCCAGCTAATTCTAGAAGCCCAA 60.118 47.826 11.53 0.00 36.92 4.12
3014 3095 2.439507 CCCAGCTAATTCTAGAAGCCCA 59.560 50.000 11.53 0.00 36.92 5.36
3015 3096 2.439880 ACCCAGCTAATTCTAGAAGCCC 59.560 50.000 11.53 0.00 36.92 5.19
3016 3097 3.847671 ACCCAGCTAATTCTAGAAGCC 57.152 47.619 11.53 0.00 36.92 4.35
3017 3098 4.262678 CCCTACCCAGCTAATTCTAGAAGC 60.263 50.000 11.53 8.99 36.48 3.86
3018 3099 4.284746 CCCCTACCCAGCTAATTCTAGAAG 59.715 50.000 11.53 0.00 0.00 2.85
3019 3100 4.232091 CCCCTACCCAGCTAATTCTAGAA 58.768 47.826 7.82 7.82 0.00 2.10
3020 3101 3.439558 CCCCCTACCCAGCTAATTCTAGA 60.440 52.174 0.00 0.00 0.00 2.43
3021 3102 2.907042 CCCCCTACCCAGCTAATTCTAG 59.093 54.545 0.00 0.00 0.00 2.43
3022 3103 2.986050 CCCCCTACCCAGCTAATTCTA 58.014 52.381 0.00 0.00 0.00 2.10
3023 3104 1.821088 CCCCCTACCCAGCTAATTCT 58.179 55.000 0.00 0.00 0.00 2.40
3024 3105 0.110678 GCCCCCTACCCAGCTAATTC 59.889 60.000 0.00 0.00 0.00 2.17
3025 3106 0.626277 TGCCCCCTACCCAGCTAATT 60.626 55.000 0.00 0.00 0.00 1.40
3026 3107 1.005556 TGCCCCCTACCCAGCTAAT 59.994 57.895 0.00 0.00 0.00 1.73
3027 3108 1.692749 CTGCCCCCTACCCAGCTAA 60.693 63.158 0.00 0.00 0.00 3.09
3028 3109 2.040884 CTGCCCCCTACCCAGCTA 60.041 66.667 0.00 0.00 0.00 3.32
3031 3112 1.062488 ATAAGCTGCCCCCTACCCAG 61.062 60.000 0.00 0.00 0.00 4.45
3032 3113 0.626277 AATAAGCTGCCCCCTACCCA 60.626 55.000 0.00 0.00 0.00 4.51
3033 3114 0.556258 AAATAAGCTGCCCCCTACCC 59.444 55.000 0.00 0.00 0.00 3.69
3034 3115 1.478837 GGAAATAAGCTGCCCCCTACC 60.479 57.143 0.00 0.00 0.00 3.18
3035 3116 1.214424 TGGAAATAAGCTGCCCCCTAC 59.786 52.381 0.00 0.00 0.00 3.18
3036 3117 1.214424 GTGGAAATAAGCTGCCCCCTA 59.786 52.381 0.00 0.00 0.00 3.53
3037 3118 0.033109 GTGGAAATAAGCTGCCCCCT 60.033 55.000 0.00 0.00 0.00 4.79
3038 3119 0.324275 TGTGGAAATAAGCTGCCCCC 60.324 55.000 0.00 0.00 0.00 5.40
3039 3120 1.106285 CTGTGGAAATAAGCTGCCCC 58.894 55.000 0.00 0.00 0.00 5.80
3040 3121 0.457443 GCTGTGGAAATAAGCTGCCC 59.543 55.000 0.00 0.00 34.05 5.36
3041 3122 0.457443 GGCTGTGGAAATAAGCTGCC 59.543 55.000 0.00 0.00 38.42 4.85
3042 3123 0.457443 GGGCTGTGGAAATAAGCTGC 59.543 55.000 0.00 0.00 37.12 5.25
3043 3124 1.106285 GGGGCTGTGGAAATAAGCTG 58.894 55.000 0.00 0.00 37.12 4.24
3044 3125 0.704076 TGGGGCTGTGGAAATAAGCT 59.296 50.000 0.00 0.00 37.12 3.74
3045 3126 1.555967 TTGGGGCTGTGGAAATAAGC 58.444 50.000 0.00 0.00 36.17 3.09
3046 3127 3.768757 TCATTTGGGGCTGTGGAAATAAG 59.231 43.478 0.00 0.00 0.00 1.73
3047 3128 3.768757 CTCATTTGGGGCTGTGGAAATAA 59.231 43.478 0.00 0.00 0.00 1.40
3048 3129 3.364549 CTCATTTGGGGCTGTGGAAATA 58.635 45.455 0.00 0.00 0.00 1.40
3049 3130 2.181975 CTCATTTGGGGCTGTGGAAAT 58.818 47.619 0.00 0.00 0.00 2.17
3050 3131 1.631405 CTCATTTGGGGCTGTGGAAA 58.369 50.000 0.00 0.00 0.00 3.13
3051 3132 0.899717 GCTCATTTGGGGCTGTGGAA 60.900 55.000 0.00 0.00 0.00 3.53
3052 3133 1.304381 GCTCATTTGGGGCTGTGGA 60.304 57.895 0.00 0.00 0.00 4.02
3053 3134 2.353610 GGCTCATTTGGGGCTGTGG 61.354 63.158 0.00 0.00 0.00 4.17
3054 3135 1.607178 TGGCTCATTTGGGGCTGTG 60.607 57.895 5.53 0.00 0.00 3.66
3055 3136 1.607467 GTGGCTCATTTGGGGCTGT 60.607 57.895 5.53 0.00 0.00 4.40
3056 3137 1.186917 TTGTGGCTCATTTGGGGCTG 61.187 55.000 5.53 0.00 0.00 4.85
3057 3138 0.471591 TTTGTGGCTCATTTGGGGCT 60.472 50.000 5.53 0.00 0.00 5.19
3058 3139 0.396060 TTTTGTGGCTCATTTGGGGC 59.604 50.000 0.00 0.00 0.00 5.80
3059 3140 1.969923 TCTTTTGTGGCTCATTTGGGG 59.030 47.619 0.00 0.00 0.00 4.96
3060 3141 3.070015 ACTTCTTTTGTGGCTCATTTGGG 59.930 43.478 0.00 0.00 0.00 4.12
3061 3142 4.053295 CACTTCTTTTGTGGCTCATTTGG 58.947 43.478 0.00 0.00 0.00 3.28
3062 3143 4.685924 ACACTTCTTTTGTGGCTCATTTG 58.314 39.130 0.00 0.00 39.52 2.32
3063 3144 5.594317 AGTACACTTCTTTTGTGGCTCATTT 59.406 36.000 0.00 0.00 39.52 2.32
3064 3145 5.009010 CAGTACACTTCTTTTGTGGCTCATT 59.991 40.000 0.00 0.00 39.52 2.57
3065 3146 4.516698 CAGTACACTTCTTTTGTGGCTCAT 59.483 41.667 0.00 0.00 39.52 2.90
3066 3147 3.876914 CAGTACACTTCTTTTGTGGCTCA 59.123 43.478 0.00 0.00 39.52 4.26
3067 3148 3.877508 ACAGTACACTTCTTTTGTGGCTC 59.122 43.478 0.00 0.00 39.52 4.70
3068 3149 3.886123 ACAGTACACTTCTTTTGTGGCT 58.114 40.909 0.00 0.00 39.52 4.75
3069 3150 4.142469 ACAACAGTACACTTCTTTTGTGGC 60.142 41.667 0.00 0.00 39.52 5.01
3070 3151 5.560966 ACAACAGTACACTTCTTTTGTGG 57.439 39.130 0.00 0.00 39.52 4.17
3071 3152 8.394877 TGAATACAACAGTACACTTCTTTTGTG 58.605 33.333 0.00 0.00 36.76 3.33
3072 3153 8.500753 TGAATACAACAGTACACTTCTTTTGT 57.499 30.769 0.00 0.00 38.66 2.83
3073 3154 9.385902 CATGAATACAACAGTACACTTCTTTTG 57.614 33.333 0.00 0.00 0.00 2.44
3074 3155 9.120538 ACATGAATACAACAGTACACTTCTTTT 57.879 29.630 0.00 0.00 0.00 2.27
3075 3156 8.559536 CACATGAATACAACAGTACACTTCTTT 58.440 33.333 0.00 0.00 0.00 2.52
3076 3157 7.173218 CCACATGAATACAACAGTACACTTCTT 59.827 37.037 0.00 0.00 0.00 2.52
3077 3158 6.650807 CCACATGAATACAACAGTACACTTCT 59.349 38.462 0.00 0.00 0.00 2.85
3078 3159 6.649141 TCCACATGAATACAACAGTACACTTC 59.351 38.462 0.00 0.00 0.00 3.01
3079 3160 6.530120 TCCACATGAATACAACAGTACACTT 58.470 36.000 0.00 0.00 0.00 3.16
3080 3161 6.109156 TCCACATGAATACAACAGTACACT 57.891 37.500 0.00 0.00 0.00 3.55
3081 3162 6.237835 CGATCCACATGAATACAACAGTACAC 60.238 42.308 0.00 0.00 0.00 2.90
3082 3163 5.810074 CGATCCACATGAATACAACAGTACA 59.190 40.000 0.00 0.00 0.00 2.90
3083 3164 5.810587 ACGATCCACATGAATACAACAGTAC 59.189 40.000 0.00 0.00 0.00 2.73
3084 3165 5.972935 ACGATCCACATGAATACAACAGTA 58.027 37.500 0.00 0.00 0.00 2.74
3085 3166 4.832248 ACGATCCACATGAATACAACAGT 58.168 39.130 0.00 0.00 0.00 3.55
3093 3174 4.478206 ACAGAAGACGATCCACATGAAT 57.522 40.909 0.00 0.00 0.00 2.57
3105 3186 6.369340 TGACTCTAAGTCTCTAACAGAAGACG 59.631 42.308 8.44 0.00 45.27 4.18
3124 3205 9.167311 GGAAATGTGTATAACAAAGATGACTCT 57.833 33.333 0.00 0.00 43.61 3.24
3125 3206 9.167311 AGGAAATGTGTATAACAAAGATGACTC 57.833 33.333 0.00 0.00 43.61 3.36
3126 3207 9.520515 AAGGAAATGTGTATAACAAAGATGACT 57.479 29.630 0.00 0.00 43.61 3.41
3149 3230 8.182227 GGAAAGTATATTTTTCTCACCGAAAGG 58.818 37.037 10.61 0.00 42.22 3.11
3150 3231 8.726988 TGGAAAGTATATTTTTCTCACCGAAAG 58.273 33.333 10.61 0.00 42.22 2.62
3151 3232 8.624367 TGGAAAGTATATTTTTCTCACCGAAA 57.376 30.769 10.61 0.00 39.76 3.46
3154 3235 7.962918 CAGTTGGAAAGTATATTTTTCTCACCG 59.037 37.037 10.61 0.00 35.42 4.94
3173 3254 6.926826 CCGCTTTACATATATGTACAGTTGGA 59.073 38.462 27.52 13.31 42.48 3.53
3174 3255 6.704493 ACCGCTTTACATATATGTACAGTTGG 59.296 38.462 28.48 28.48 42.48 3.77
3177 3258 8.174733 ACTACCGCTTTACATATATGTACAGT 57.825 34.615 27.75 20.11 42.48 3.55
3179 3260 9.467258 GAAACTACCGCTTTACATATATGTACA 57.533 33.333 22.44 16.25 42.48 2.90
3188 3269 4.839121 TCCATGAAACTACCGCTTTACAT 58.161 39.130 0.00 0.00 0.00 2.29
3191 3272 4.901868 AGTTCCATGAAACTACCGCTTTA 58.098 39.130 0.00 0.00 37.71 1.85
3201 3282 6.586844 GTGAGTACTGAGTAGTTCCATGAAAC 59.413 42.308 0.00 0.00 38.36 2.78
3204 3285 4.395231 CGTGAGTACTGAGTAGTTCCATGA 59.605 45.833 0.00 0.00 38.36 3.07
3205 3286 4.438880 CCGTGAGTACTGAGTAGTTCCATG 60.439 50.000 0.00 2.06 38.36 3.66
3206 3287 3.695060 CCGTGAGTACTGAGTAGTTCCAT 59.305 47.826 0.00 0.00 38.36 3.41
3209 3290 4.252073 TCTCCGTGAGTACTGAGTAGTTC 58.748 47.826 0.00 0.00 38.73 3.01
3219 3300 3.946558 AGGTAGTGATTCTCCGTGAGTAC 59.053 47.826 1.60 0.00 0.00 2.73
3222 3303 2.755655 ACAGGTAGTGATTCTCCGTGAG 59.244 50.000 0.00 0.00 0.00 3.51
3223 3304 2.803956 ACAGGTAGTGATTCTCCGTGA 58.196 47.619 0.00 0.00 0.00 4.35
3224 3305 4.920640 ATACAGGTAGTGATTCTCCGTG 57.079 45.455 0.00 0.00 0.00 4.94
3225 3306 6.304624 TCATATACAGGTAGTGATTCTCCGT 58.695 40.000 0.00 0.00 0.00 4.69
3226 3307 6.819397 TCATATACAGGTAGTGATTCTCCG 57.181 41.667 0.00 0.00 0.00 4.63
3231 3312 9.632638 AAGCAAAATCATATACAGGTAGTGATT 57.367 29.630 13.01 13.01 36.63 2.57
3233 3314 9.461312 AAAAGCAAAATCATATACAGGTAGTGA 57.539 29.630 0.00 1.44 0.00 3.41
3234 3315 9.722056 GAAAAGCAAAATCATATACAGGTAGTG 57.278 33.333 0.00 0.00 0.00 2.74
3239 3320 7.775120 ACAGGAAAAGCAAAATCATATACAGG 58.225 34.615 0.00 0.00 0.00 4.00
3253 3334 6.070251 TCCAGTCTCATATAACAGGAAAAGCA 60.070 38.462 0.00 0.00 29.20 3.91
3254 3335 6.349300 TCCAGTCTCATATAACAGGAAAAGC 58.651 40.000 0.00 0.00 29.20 3.51
3255 3336 7.383572 CGATCCAGTCTCATATAACAGGAAAAG 59.616 40.741 0.00 0.00 35.10 2.27
3258 3339 5.833667 ACGATCCAGTCTCATATAACAGGAA 59.166 40.000 0.00 0.00 35.10 3.36
3259 3340 5.386060 ACGATCCAGTCTCATATAACAGGA 58.614 41.667 0.00 0.00 35.80 3.86
3288 3369 1.702401 TGGTATTTCACTGGGCACTGA 59.298 47.619 0.00 0.00 0.00 3.41
3316 3397 8.389779 TCAAAACTACTAATCAGATTTGCACA 57.610 30.769 0.00 0.00 0.00 4.57
3317 3398 9.846248 ATTCAAAACTACTAATCAGATTTGCAC 57.154 29.630 0.00 0.00 0.00 4.57
3335 3416 8.134895 TCTGGACACAACAAAGATATTCAAAAC 58.865 33.333 0.00 0.00 0.00 2.43
3340 3421 6.261118 GCATCTGGACACAACAAAGATATTC 58.739 40.000 0.00 0.00 0.00 1.75
3344 3425 2.485426 CGCATCTGGACACAACAAAGAT 59.515 45.455 0.00 0.00 0.00 2.40
3346 3427 1.069022 CCGCATCTGGACACAACAAAG 60.069 52.381 0.00 0.00 0.00 2.77
3417 3498 2.304180 CTCTTCTGGGTCACTCCACATT 59.696 50.000 0.00 0.00 38.11 2.71
3544 3625 7.130269 ACAACAAGCGTCAGTAAAAATCTTAC 58.870 34.615 0.00 0.00 0.00 2.34
3549 3630 5.971202 CAGAACAACAAGCGTCAGTAAAAAT 59.029 36.000 0.00 0.00 0.00 1.82
3560 3641 1.265095 ACTGCATCAGAACAACAAGCG 59.735 47.619 0.29 0.00 35.18 4.68
3700 3781 3.569701 ACATGCAAGTTCTCGGACAATTT 59.430 39.130 0.00 0.00 0.00 1.82
3759 3843 2.828868 GTGCAGACCACACCTGGA 59.171 61.111 0.00 0.00 44.06 3.86
3973 4063 2.695147 CCAATGGAACCTATCAAAGCCC 59.305 50.000 0.00 0.00 0.00 5.19
4265 4356 7.630082 ACCTCAGGTCATATTAACTTGCTTAA 58.370 34.615 0.00 0.00 0.00 1.85
4289 4380 5.994668 GGGATGATATGTTCCTTCTCAGAAC 59.005 44.000 0.00 0.00 43.20 3.01
4360 4451 4.442192 GGCACCAGTTCATTTGTTACCAAA 60.442 41.667 0.00 0.00 44.27 3.28
4476 4574 8.147058 ACTGAAAAACATGGTATGCATAAAACA 58.853 29.630 8.28 8.60 0.00 2.83
4540 4638 0.252696 TGGCATAGTCAGTCCCCACT 60.253 55.000 0.00 0.00 0.00 4.00
4552 4650 7.099266 TGATCAAATACAAAAGGTGGCATAG 57.901 36.000 0.00 0.00 0.00 2.23
4574 4672 8.185505 CGGAATTAAAAGGGTCGATTAAAATGA 58.814 33.333 0.00 0.00 0.00 2.57
4575 4673 7.971722 ACGGAATTAAAAGGGTCGATTAAAATG 59.028 33.333 0.00 0.00 0.00 2.32
4577 4675 7.451501 ACGGAATTAAAAGGGTCGATTAAAA 57.548 32.000 0.00 0.00 0.00 1.52
4581 4679 4.157105 CCAACGGAATTAAAAGGGTCGATT 59.843 41.667 0.00 0.00 0.00 3.34
4596 4694 0.762418 TCTCTTTCCTGCCAACGGAA 59.238 50.000 0.00 0.00 38.71 4.30
4628 4726 2.989840 GTTGTTCTCATCCGTCTCTGTG 59.010 50.000 0.00 0.00 0.00 3.66
4629 4727 2.028930 GGTTGTTCTCATCCGTCTCTGT 60.029 50.000 0.00 0.00 0.00 3.41
4640 4740 1.338105 CCTCGCATCTGGTTGTTCTCA 60.338 52.381 0.00 0.00 0.00 3.27
4652 4752 2.279784 CTTCTCGGCCCTCGCATC 60.280 66.667 0.00 0.00 39.05 3.91
4728 4830 2.862541 AGCTACAACAATGAGCACCAA 58.137 42.857 0.00 0.00 38.73 3.67
4754 4856 4.081309 TCAGATGATCAGATTGCACTGTGA 60.081 41.667 12.86 6.36 38.79 3.58
4826 4931 2.522193 GGACAAAACCGGGGCCAA 60.522 61.111 6.32 0.00 0.00 4.52
4876 5002 8.588290 TGCATAAGTTGGTTCCAAAATATACT 57.412 30.769 5.81 0.00 0.00 2.12
4877 5003 9.816354 AATGCATAAGTTGGTTCCAAAATATAC 57.184 29.630 0.00 4.21 0.00 1.47
4879 5005 8.761689 AGAATGCATAAGTTGGTTCCAAAATAT 58.238 29.630 0.00 5.46 0.00 1.28
4886 5012 6.823689 TCTTCTAGAATGCATAAGTTGGTTCC 59.176 38.462 5.44 0.00 0.00 3.62
4959 5091 2.620585 GCTGAGCAAGATTGAATACCCC 59.379 50.000 0.00 0.00 0.00 4.95
4963 5095 4.835678 TGACTGCTGAGCAAGATTGAATA 58.164 39.130 9.07 0.00 38.41 1.75
4967 5102 1.130749 GCTGACTGCTGAGCAAGATTG 59.869 52.381 9.07 0.00 38.41 2.67
4968 5103 1.451067 GCTGACTGCTGAGCAAGATT 58.549 50.000 9.07 0.00 38.41 2.40
4988 5123 2.509052 TGTGTCCACAGAGTTCTTCG 57.491 50.000 0.00 0.00 36.21 3.79
5001 5136 2.414161 GCCGCAGAATTTAACTGTGTCC 60.414 50.000 0.00 0.00 42.17 4.02
5037 5172 5.130292 AGAAAAATGCCATGACTCACAAG 57.870 39.130 0.00 0.00 0.00 3.16
5041 5176 5.535783 TCAGAAAGAAAAATGCCATGACTCA 59.464 36.000 0.00 0.00 0.00 3.41
5045 5180 5.011329 AGCTTCAGAAAGAAAAATGCCATGA 59.989 36.000 0.00 0.00 35.40 3.07
5050 5185 6.594284 AACAAGCTTCAGAAAGAAAAATGC 57.406 33.333 0.00 0.00 35.40 3.56
5058 5193 7.490402 ACAAGAAATGAAACAAGCTTCAGAAAG 59.510 33.333 0.00 0.00 38.66 2.62
5086 5221 5.045578 ACCCATCTGTTACTGAATTACTGCT 60.046 40.000 0.00 0.00 0.00 4.24
5088 5223 6.644347 AGACCCATCTGTTACTGAATTACTG 58.356 40.000 0.00 0.00 32.29 2.74
5089 5224 6.875972 AGACCCATCTGTTACTGAATTACT 57.124 37.500 0.00 0.00 32.29 2.24
5114 5257 2.280592 ACGGTTTCCAGTGCGGAC 60.281 61.111 0.00 0.00 46.36 4.79
5134 5280 3.496130 GTGAATCTGTGTTGTCAGACAGG 59.504 47.826 2.82 0.00 45.40 4.00
5142 5288 4.965814 ACATCTCAGTGAATCTGTGTTGT 58.034 39.130 0.00 7.39 43.97 3.32
5160 5306 8.810652 TTTTTCAGTTTGGTATTGCTTACATC 57.189 30.769 0.00 0.00 31.99 3.06
5229 5385 0.865111 CACCAAGATTTCGTGACGCA 59.135 50.000 0.00 0.00 0.00 5.24
5232 5393 2.875933 TGGTTCACCAAGATTTCGTGAC 59.124 45.455 0.00 0.00 44.35 3.67
5255 5416 3.420893 TGGGACAAACTAGCAATCCTTG 58.579 45.455 0.00 0.00 31.92 3.61
5295 5456 3.960102 CAGGAGGAGAGAACTAGATTGCT 59.040 47.826 0.00 0.00 0.00 3.91
5322 5483 1.131638 CTGCTATTCCTGGGCCAGTA 58.868 55.000 30.68 19.13 0.00 2.74
5324 5485 0.548031 TTCTGCTATTCCTGGGCCAG 59.452 55.000 27.04 27.04 0.00 4.85
5336 5497 4.640771 AGAACATGGGAGTTTTCTGCTA 57.359 40.909 0.00 0.00 38.36 3.49
5359 5520 3.007940 ACATGGAGTTTTCGATGGTCTGA 59.992 43.478 0.00 0.00 42.04 3.27
5361 5522 3.703001 ACATGGAGTTTTCGATGGTCT 57.297 42.857 0.00 0.00 42.04 3.85
5443 5604 0.603569 GGAGTCAGACGATGGTGTGT 59.396 55.000 4.93 0.00 38.50 3.72
5449 5610 1.087501 TCTCGTGGAGTCAGACGATG 58.912 55.000 14.80 10.31 43.26 3.84
5450 5611 1.822506 TTCTCGTGGAGTCAGACGAT 58.177 50.000 14.80 0.00 43.26 3.73
5487 5772 0.322008 AGTTCTTGCTACCTGCCAGC 60.322 55.000 0.00 0.00 42.00 4.85
5489 5774 1.545428 CCAAGTTCTTGCTACCTGCCA 60.545 52.381 7.00 0.00 42.00 4.92
5490 5775 1.168714 CCAAGTTCTTGCTACCTGCC 58.831 55.000 7.00 0.00 42.00 4.85
5491 5776 2.079925 CTCCAAGTTCTTGCTACCTGC 58.920 52.381 7.00 0.00 43.25 4.85
5493 5778 3.744660 CAACTCCAAGTTCTTGCTACCT 58.255 45.455 7.00 0.00 36.03 3.08
5494 5779 2.226674 GCAACTCCAAGTTCTTGCTACC 59.773 50.000 7.00 0.00 36.03 3.18
5495 5780 2.226674 GGCAACTCCAAGTTCTTGCTAC 59.773 50.000 7.00 0.00 36.03 3.58
5496 5781 2.158682 TGGCAACTCCAAGTTCTTGCTA 60.159 45.455 7.00 0.00 43.21 3.49
5497 5782 1.322442 GGCAACTCCAAGTTCTTGCT 58.678 50.000 7.00 0.00 36.03 3.91
5498 5783 1.032014 TGGCAACTCCAAGTTCTTGC 58.968 50.000 7.00 0.00 43.21 4.01
5568 5910 0.818296 ATAGTTTGCTCGGAGCGACT 59.182 50.000 29.31 29.31 46.26 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.