Multiple sequence alignment - TraesCS1D01G372400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G372400 chr1D 100.000 3410 0 0 1 3410 450578209 450581618 0.000000e+00 6298.0
1 TraesCS1D01G372400 chr1D 88.908 1713 152 24 722 2417 450738966 450740657 0.000000e+00 2076.0
2 TraesCS1D01G372400 chr1D 83.333 1662 199 46 722 2366 451035958 451034358 0.000000e+00 1463.0
3 TraesCS1D01G372400 chr1D 83.522 1499 183 44 663 2132 451044295 451042832 0.000000e+00 1341.0
4 TraesCS1D01G372400 chr1D 89.741 1043 94 7 953 1984 451063170 451062130 0.000000e+00 1321.0
5 TraesCS1D01G372400 chr1D 89.142 571 51 5 2543 3111 450742190 450742751 0.000000e+00 701.0
6 TraesCS1D01G372400 chr1D 90.236 297 27 2 3111 3407 450742812 450743106 1.480000e-103 387.0
7 TraesCS1D01G372400 chr1D 79.949 389 71 6 2720 3105 60139633 60140017 2.590000e-71 279.0
8 TraesCS1D01G372400 chr1D 87.866 239 20 5 23 260 469881936 469881706 4.340000e-69 272.0
9 TraesCS1D01G372400 chr1D 85.502 269 19 7 322 570 450738596 450738864 2.610000e-66 263.0
10 TraesCS1D01G372400 chr1A 87.425 1829 147 30 622 2417 545751656 545753434 0.000000e+00 2026.0
11 TraesCS1D01G372400 chr1A 83.721 1548 182 42 634 2150 545764297 545762789 0.000000e+00 1399.0
12 TraesCS1D01G372400 chr1A 92.857 84 6 0 944 1027 545856171 545856088 4.620000e-24 122.0
13 TraesCS1D01G372400 chr1A 95.890 73 3 0 353 425 545751445 545751517 5.980000e-23 119.0
14 TraesCS1D01G372400 chr1A 79.433 141 11 10 448 570 545751514 545751654 2.180000e-12 84.2
15 TraesCS1D01G372400 chr1B 88.263 1721 140 34 729 2417 618316577 618318267 0.000000e+00 2002.0
16 TraesCS1D01G372400 chr1B 86.937 1822 170 36 622 2411 618542619 618544404 0.000000e+00 1984.0
17 TraesCS1D01G372400 chr1B 89.384 1460 127 15 960 2417 618196933 618198366 0.000000e+00 1812.0
18 TraesCS1D01G372400 chr1B 82.646 1648 223 37 622 2250 618699282 618697679 0.000000e+00 1400.0
19 TraesCS1D01G372400 chr1B 83.957 1390 165 34 722 2076 619095859 619094493 0.000000e+00 1279.0
20 TraesCS1D01G372400 chr1B 87.200 250 29 3 3161 3410 618373478 618373724 7.200000e-72 281.0
21 TraesCS1D01G372400 chr1B 87.866 239 26 2 23 260 564655914 564655678 9.320000e-71 278.0
22 TraesCS1D01G372400 chr1B 87.192 203 19 4 293 490 618196358 618196558 1.230000e-54 224.0
23 TraesCS1D01G372400 chr1B 93.662 142 6 1 351 489 618542365 618542506 3.450000e-50 209.0
24 TraesCS1D01G372400 chr1B 84.974 193 4 5 718 905 618196744 618196916 4.520000e-39 172.0
25 TraesCS1D01G372400 chr1B 84.956 113 15 2 2607 2718 671219860 671219749 2.780000e-21 113.0
26 TraesCS1D01G372400 chr1B 84.071 113 15 3 2607 2718 671217088 671216978 4.650000e-19 106.0
27 TraesCS1D01G372400 chr1B 94.444 54 1 2 569 622 190882257 190882206 7.840000e-12 82.4
28 TraesCS1D01G372400 chr4A 81.934 393 62 7 2723 3111 72971886 72972273 1.180000e-84 324.0
29 TraesCS1D01G372400 chr4A 86.207 116 12 4 2606 2719 603953529 603953416 4.620000e-24 122.0
30 TraesCS1D01G372400 chr3B 81.679 393 63 5 2721 3111 531792449 531792064 5.490000e-83 318.0
31 TraesCS1D01G372400 chr3B 86.235 247 31 3 15 260 718303647 718303891 7.260000e-67 265.0
32 TraesCS1D01G372400 chr3B 87.826 115 12 2 2606 2719 20997414 20997527 2.130000e-27 134.0
33 TraesCS1D01G372400 chr3B 92.593 54 2 2 569 622 803005898 803005949 3.650000e-10 76.8
34 TraesCS1D01G372400 chr3B 89.831 59 4 2 576 634 572247407 572247463 1.310000e-09 75.0
35 TraesCS1D01G372400 chr3D 81.183 372 68 2 2723 3093 382501375 382501005 7.150000e-77 298.0
36 TraesCS1D01G372400 chr3D 85.772 246 31 3 16 260 540258117 540258359 1.210000e-64 257.0
37 TraesCS1D01G372400 chr7D 81.016 374 68 3 2723 3095 460271319 460270948 9.250000e-76 294.0
38 TraesCS1D01G372400 chr7D 81.739 115 19 2 2603 2716 566901191 566901304 1.010000e-15 95.3
39 TraesCS1D01G372400 chr6D 80.759 395 61 11 2719 3111 356601542 356601923 9.250000e-76 294.0
40 TraesCS1D01G372400 chr6D 84.034 119 17 2 2602 2719 82943986 82943869 2.780000e-21 113.0
41 TraesCS1D01G372400 chr4D 88.285 239 25 3 23 260 111559652 111559416 2.000000e-72 283.0
42 TraesCS1D01G372400 chr5B 87.448 239 27 2 23 260 87300856 87300620 4.340000e-69 272.0
43 TraesCS1D01G372400 chr5B 92.593 54 2 2 570 623 65533636 65533687 3.650000e-10 76.8
44 TraesCS1D01G372400 chr2B 86.555 238 28 4 24 260 237760429 237760663 3.380000e-65 259.0
45 TraesCS1D01G372400 chr4B 86.250 240 28 4 25 262 188848926 188848690 4.370000e-64 255.0
46 TraesCS1D01G372400 chr4B 84.762 105 13 3 2616 2719 27833733 27833835 6.020000e-18 102.0
47 TraesCS1D01G372400 chr2D 79.200 375 72 5 2724 3095 7129682 7129311 4.370000e-64 255.0
48 TraesCS1D01G372400 chr2D 86.087 115 14 2 2606 2719 321240766 321240653 4.620000e-24 122.0
49 TraesCS1D01G372400 chr5A 85.039 254 28 9 12 260 658330716 658330964 2.030000e-62 250.0
50 TraesCS1D01G372400 chr5A 94.231 52 2 1 576 627 609881357 609881307 1.010000e-10 78.7
51 TraesCS1D01G372400 chr3A 77.635 389 75 10 2732 3111 674569249 674568864 3.420000e-55 226.0
52 TraesCS1D01G372400 chr3A 90.323 62 3 3 563 622 38119148 38119208 1.010000e-10 78.7
53 TraesCS1D01G372400 chr7B 84.298 121 15 4 2601 2719 484891340 484891222 7.730000e-22 115.0
54 TraesCS1D01G372400 chr5D 92.727 55 2 2 569 623 1790793 1790845 1.010000e-10 78.7
55 TraesCS1D01G372400 chr6B 92.453 53 3 1 577 629 10905256 10905205 1.310000e-09 75.0
56 TraesCS1D01G372400 chr6B 92.453 53 3 1 577 629 10934468 10934519 1.310000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G372400 chr1D 450578209 450581618 3409 False 6298.000000 6298 100.000000 1 3410 1 chr1D.!!$F2 3409
1 TraesCS1D01G372400 chr1D 451034358 451035958 1600 True 1463.000000 1463 83.333000 722 2366 1 chr1D.!!$R1 1644
2 TraesCS1D01G372400 chr1D 451042832 451044295 1463 True 1341.000000 1341 83.522000 663 2132 1 chr1D.!!$R2 1469
3 TraesCS1D01G372400 chr1D 451062130 451063170 1040 True 1321.000000 1321 89.741000 953 1984 1 chr1D.!!$R3 1031
4 TraesCS1D01G372400 chr1D 450738596 450743106 4510 False 856.750000 2076 88.447000 322 3407 4 chr1D.!!$F3 3085
5 TraesCS1D01G372400 chr1A 545762789 545764297 1508 True 1399.000000 1399 83.721000 634 2150 1 chr1A.!!$R1 1516
6 TraesCS1D01G372400 chr1A 545751445 545753434 1989 False 743.066667 2026 87.582667 353 2417 3 chr1A.!!$F1 2064
7 TraesCS1D01G372400 chr1B 618316577 618318267 1690 False 2002.000000 2002 88.263000 729 2417 1 chr1B.!!$F1 1688
8 TraesCS1D01G372400 chr1B 618697679 618699282 1603 True 1400.000000 1400 82.646000 622 2250 1 chr1B.!!$R3 1628
9 TraesCS1D01G372400 chr1B 619094493 619095859 1366 True 1279.000000 1279 83.957000 722 2076 1 chr1B.!!$R4 1354
10 TraesCS1D01G372400 chr1B 618542365 618544404 2039 False 1096.500000 1984 90.299500 351 2411 2 chr1B.!!$F4 2060
11 TraesCS1D01G372400 chr1B 618196358 618198366 2008 False 736.000000 1812 87.183333 293 2417 3 chr1B.!!$F3 2124

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 166 0.040351 TCTGTCTCTCTGGGAGTGGG 59.960 60.0 4.14 0.0 42.40 4.61 F
437 443 0.248949 GTACGCGGGGAGATCTGTTC 60.249 60.0 12.47 0.0 0.00 3.18 F
1692 1844 0.321298 GGTTGTCCGCTGAGGCTAAA 60.321 55.0 0.00 0.0 40.77 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2091 2294 0.735978 CAGTAATGTCGACAGCGCCA 60.736 55.0 24.41 3.93 37.46 5.69 R
2401 2650 0.357894 CGAACGACGAGTTAGTTGCG 59.642 55.0 0.00 0.00 44.35 4.85 R
3176 4895 0.108138 AGTTGCTACATGGAGGACGC 60.108 55.0 7.16 0.00 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.434352 GGGGTTTCTACTGTTCTTTTGAC 57.566 43.478 0.00 0.00 0.00 3.18
23 24 4.024302 GGGGTTTCTACTGTTCTTTTGACG 60.024 45.833 0.00 0.00 0.00 4.35
24 25 4.812626 GGGTTTCTACTGTTCTTTTGACGA 59.187 41.667 0.00 0.00 0.00 4.20
25 26 5.469084 GGGTTTCTACTGTTCTTTTGACGAT 59.531 40.000 0.00 0.00 0.00 3.73
26 27 6.017357 GGGTTTCTACTGTTCTTTTGACGATT 60.017 38.462 0.00 0.00 0.00 3.34
27 28 7.415229 GGTTTCTACTGTTCTTTTGACGATTT 58.585 34.615 0.00 0.00 0.00 2.17
28 29 7.913821 GGTTTCTACTGTTCTTTTGACGATTTT 59.086 33.333 0.00 0.00 0.00 1.82
29 30 8.944927 GTTTCTACTGTTCTTTTGACGATTTTC 58.055 33.333 0.00 0.00 0.00 2.29
30 31 7.186021 TCTACTGTTCTTTTGACGATTTTCC 57.814 36.000 0.00 0.00 0.00 3.13
31 32 5.828299 ACTGTTCTTTTGACGATTTTCCA 57.172 34.783 0.00 0.00 0.00 3.53
32 33 6.391227 ACTGTTCTTTTGACGATTTTCCAT 57.609 33.333 0.00 0.00 0.00 3.41
33 34 6.208644 ACTGTTCTTTTGACGATTTTCCATG 58.791 36.000 0.00 0.00 0.00 3.66
34 35 5.527951 TGTTCTTTTGACGATTTTCCATGG 58.472 37.500 4.97 4.97 0.00 3.66
35 36 4.173036 TCTTTTGACGATTTTCCATGGC 57.827 40.909 6.96 0.00 0.00 4.40
36 37 2.627863 TTTGACGATTTTCCATGGCG 57.372 45.000 6.96 7.04 0.00 5.69
37 38 1.529226 TTGACGATTTTCCATGGCGT 58.471 45.000 13.25 13.25 37.97 5.68
38 39 3.897819 GACGATTTTCCATGGCGTC 57.102 52.632 20.93 20.93 43.37 5.19
39 40 3.241493 ACGATTTTCCATGGCGTCA 57.759 47.368 6.96 0.00 0.00 4.35
40 41 1.086696 ACGATTTTCCATGGCGTCAG 58.913 50.000 6.96 0.00 0.00 3.51
41 42 0.248215 CGATTTTCCATGGCGTCAGC 60.248 55.000 6.96 0.00 44.18 4.26
42 43 1.098050 GATTTTCCATGGCGTCAGCT 58.902 50.000 6.96 0.00 44.37 4.24
43 44 1.474077 GATTTTCCATGGCGTCAGCTT 59.526 47.619 6.96 0.00 44.37 3.74
44 45 1.327303 TTTTCCATGGCGTCAGCTTT 58.673 45.000 6.96 0.00 44.37 3.51
45 46 1.327303 TTTCCATGGCGTCAGCTTTT 58.673 45.000 6.96 0.00 44.37 2.27
46 47 0.597568 TTCCATGGCGTCAGCTTTTG 59.402 50.000 6.96 0.00 44.37 2.44
61 62 4.520743 GCTTTTGCTTGGTTTGTTCTTC 57.479 40.909 0.00 0.00 43.35 2.87
62 63 4.183865 GCTTTTGCTTGGTTTGTTCTTCT 58.816 39.130 0.00 0.00 43.35 2.85
63 64 4.033243 GCTTTTGCTTGGTTTGTTCTTCTG 59.967 41.667 0.00 0.00 43.35 3.02
64 65 5.398603 TTTTGCTTGGTTTGTTCTTCTGA 57.601 34.783 0.00 0.00 0.00 3.27
65 66 4.637483 TTGCTTGGTTTGTTCTTCTGAG 57.363 40.909 0.00 0.00 0.00 3.35
66 67 3.620488 TGCTTGGTTTGTTCTTCTGAGT 58.380 40.909 0.00 0.00 0.00 3.41
67 68 4.016444 TGCTTGGTTTGTTCTTCTGAGTT 58.984 39.130 0.00 0.00 0.00 3.01
68 69 4.096382 TGCTTGGTTTGTTCTTCTGAGTTC 59.904 41.667 0.00 0.00 0.00 3.01
69 70 4.336713 GCTTGGTTTGTTCTTCTGAGTTCT 59.663 41.667 0.00 0.00 0.00 3.01
70 71 5.163612 GCTTGGTTTGTTCTTCTGAGTTCTT 60.164 40.000 0.00 0.00 0.00 2.52
71 72 6.625960 GCTTGGTTTGTTCTTCTGAGTTCTTT 60.626 38.462 0.00 0.00 0.00 2.52
72 73 6.194796 TGGTTTGTTCTTCTGAGTTCTTTG 57.805 37.500 0.00 0.00 0.00 2.77
73 74 5.710099 TGGTTTGTTCTTCTGAGTTCTTTGT 59.290 36.000 0.00 0.00 0.00 2.83
74 75 6.882140 TGGTTTGTTCTTCTGAGTTCTTTGTA 59.118 34.615 0.00 0.00 0.00 2.41
75 76 7.392113 TGGTTTGTTCTTCTGAGTTCTTTGTAA 59.608 33.333 0.00 0.00 0.00 2.41
76 77 7.910683 GGTTTGTTCTTCTGAGTTCTTTGTAAG 59.089 37.037 0.00 0.00 0.00 2.34
77 78 8.665685 GTTTGTTCTTCTGAGTTCTTTGTAAGA 58.334 33.333 0.00 0.00 35.26 2.10
78 79 8.425577 TTGTTCTTCTGAGTTCTTTGTAAGAG 57.574 34.615 0.00 0.00 39.03 2.85
79 80 7.556844 TGTTCTTCTGAGTTCTTTGTAAGAGT 58.443 34.615 0.00 0.00 39.03 3.24
80 81 7.707035 TGTTCTTCTGAGTTCTTTGTAAGAGTC 59.293 37.037 0.00 0.00 39.03 3.36
81 82 6.439599 TCTTCTGAGTTCTTTGTAAGAGTCG 58.560 40.000 0.00 0.00 39.03 4.18
82 83 5.122512 TCTGAGTTCTTTGTAAGAGTCGG 57.877 43.478 0.00 0.00 39.03 4.79
83 84 4.825634 TCTGAGTTCTTTGTAAGAGTCGGA 59.174 41.667 0.00 0.00 39.03 4.55
84 85 5.048643 TCTGAGTTCTTTGTAAGAGTCGGAG 60.049 44.000 0.00 0.00 39.03 4.63
85 86 4.583489 TGAGTTCTTTGTAAGAGTCGGAGT 59.417 41.667 0.00 0.00 39.03 3.85
86 87 5.068723 TGAGTTCTTTGTAAGAGTCGGAGTT 59.931 40.000 0.00 0.00 39.03 3.01
87 88 5.290386 AGTTCTTTGTAAGAGTCGGAGTTG 58.710 41.667 0.00 0.00 39.03 3.16
88 89 4.931661 TCTTTGTAAGAGTCGGAGTTGT 57.068 40.909 0.00 0.00 32.71 3.32
89 90 6.040166 AGTTCTTTGTAAGAGTCGGAGTTGTA 59.960 38.462 0.00 0.00 39.03 2.41
90 91 6.585695 TCTTTGTAAGAGTCGGAGTTGTAT 57.414 37.500 0.00 0.00 32.71 2.29
91 92 6.989659 TCTTTGTAAGAGTCGGAGTTGTATT 58.010 36.000 0.00 0.00 32.71 1.89
92 93 8.114331 TCTTTGTAAGAGTCGGAGTTGTATTA 57.886 34.615 0.00 0.00 32.71 0.98
93 94 8.746530 TCTTTGTAAGAGTCGGAGTTGTATTAT 58.253 33.333 0.00 0.00 32.71 1.28
94 95 8.922058 TTTGTAAGAGTCGGAGTTGTATTATC 57.078 34.615 0.00 0.00 0.00 1.75
95 96 7.876936 TGTAAGAGTCGGAGTTGTATTATCT 57.123 36.000 0.00 0.00 0.00 1.98
96 97 7.704271 TGTAAGAGTCGGAGTTGTATTATCTG 58.296 38.462 0.00 0.00 0.00 2.90
97 98 5.776173 AGAGTCGGAGTTGTATTATCTGG 57.224 43.478 0.00 0.00 0.00 3.86
98 99 4.038162 AGAGTCGGAGTTGTATTATCTGGC 59.962 45.833 0.00 0.00 0.00 4.85
99 100 3.069729 AGTCGGAGTTGTATTATCTGGCC 59.930 47.826 0.00 0.00 0.00 5.36
100 101 2.035449 TCGGAGTTGTATTATCTGGCCG 59.965 50.000 0.00 0.00 37.70 6.13
101 102 2.223971 CGGAGTTGTATTATCTGGCCGT 60.224 50.000 0.00 0.00 0.00 5.68
102 103 3.005050 CGGAGTTGTATTATCTGGCCGTA 59.995 47.826 0.00 0.00 0.00 4.02
103 104 4.557205 GGAGTTGTATTATCTGGCCGTAG 58.443 47.826 0.00 0.00 0.00 3.51
129 130 3.808728 ACATGTTGTCGATTAGGATGGG 58.191 45.455 0.00 0.00 0.00 4.00
130 131 2.325583 TGTTGTCGATTAGGATGGGC 57.674 50.000 0.00 0.00 0.00 5.36
131 132 1.837439 TGTTGTCGATTAGGATGGGCT 59.163 47.619 0.00 0.00 0.00 5.19
132 133 2.238646 TGTTGTCGATTAGGATGGGCTT 59.761 45.455 0.00 0.00 0.00 4.35
133 134 3.279434 GTTGTCGATTAGGATGGGCTTT 58.721 45.455 0.00 0.00 0.00 3.51
134 135 2.917933 TGTCGATTAGGATGGGCTTTG 58.082 47.619 0.00 0.00 0.00 2.77
135 136 1.604278 GTCGATTAGGATGGGCTTTGC 59.396 52.381 0.00 0.00 0.00 3.68
146 147 2.419057 GGCTTTGCCTTGAGTGTGT 58.581 52.632 0.73 0.00 46.69 3.72
147 148 0.312102 GGCTTTGCCTTGAGTGTGTC 59.688 55.000 0.73 0.00 46.69 3.67
148 149 1.312815 GCTTTGCCTTGAGTGTGTCT 58.687 50.000 0.00 0.00 0.00 3.41
149 150 1.002033 GCTTTGCCTTGAGTGTGTCTG 60.002 52.381 0.00 0.00 0.00 3.51
150 151 2.292267 CTTTGCCTTGAGTGTGTCTGT 58.708 47.619 0.00 0.00 0.00 3.41
151 152 1.953559 TTGCCTTGAGTGTGTCTGTC 58.046 50.000 0.00 0.00 0.00 3.51
152 153 1.123077 TGCCTTGAGTGTGTCTGTCT 58.877 50.000 0.00 0.00 0.00 3.41
153 154 1.069204 TGCCTTGAGTGTGTCTGTCTC 59.931 52.381 0.00 0.00 0.00 3.36
154 155 1.342819 GCCTTGAGTGTGTCTGTCTCT 59.657 52.381 0.00 0.00 0.00 3.10
155 156 2.609244 GCCTTGAGTGTGTCTGTCTCTC 60.609 54.545 0.00 0.00 0.00 3.20
156 157 2.890311 CCTTGAGTGTGTCTGTCTCTCT 59.110 50.000 0.00 0.00 0.00 3.10
157 158 3.305267 CCTTGAGTGTGTCTGTCTCTCTG 60.305 52.174 0.00 0.00 0.00 3.35
158 159 2.234143 TGAGTGTGTCTGTCTCTCTGG 58.766 52.381 0.00 0.00 0.00 3.86
159 160 1.543802 GAGTGTGTCTGTCTCTCTGGG 59.456 57.143 0.00 0.00 0.00 4.45
160 161 1.145945 AGTGTGTCTGTCTCTCTGGGA 59.854 52.381 0.00 0.00 0.00 4.37
161 162 1.543802 GTGTGTCTGTCTCTCTGGGAG 59.456 57.143 0.00 0.00 43.12 4.30
162 163 1.145945 TGTGTCTGTCTCTCTGGGAGT 59.854 52.381 4.14 0.00 42.40 3.85
163 164 1.543802 GTGTCTGTCTCTCTGGGAGTG 59.456 57.143 4.14 0.00 42.40 3.51
164 165 1.181786 GTCTGTCTCTCTGGGAGTGG 58.818 60.000 4.14 0.00 42.40 4.00
165 166 0.040351 TCTGTCTCTCTGGGAGTGGG 59.960 60.000 4.14 0.00 42.40 4.61
166 167 1.610673 TGTCTCTCTGGGAGTGGGC 60.611 63.158 4.14 0.00 42.40 5.36
167 168 1.305718 GTCTCTCTGGGAGTGGGCT 60.306 63.158 4.14 0.00 42.40 5.19
168 169 0.907230 GTCTCTCTGGGAGTGGGCTT 60.907 60.000 4.14 0.00 42.40 4.35
169 170 0.906756 TCTCTCTGGGAGTGGGCTTG 60.907 60.000 4.14 0.00 42.40 4.01
170 171 1.908340 CTCTCTGGGAGTGGGCTTGG 61.908 65.000 0.00 0.00 37.30 3.61
171 172 3.635268 CTCTGGGAGTGGGCTTGGC 62.635 68.421 0.00 0.00 0.00 4.52
188 189 7.447374 GGCTTGGCCTTTATTATTTTTGTTT 57.553 32.000 3.32 0.00 46.69 2.83
189 190 7.881142 GGCTTGGCCTTTATTATTTTTGTTTT 58.119 30.769 3.32 0.00 46.69 2.43
190 191 8.356657 GGCTTGGCCTTTATTATTTTTGTTTTT 58.643 29.630 3.32 0.00 46.69 1.94
191 192 9.179552 GCTTGGCCTTTATTATTTTTGTTTTTG 57.820 29.630 3.32 0.00 0.00 2.44
192 193 9.179552 CTTGGCCTTTATTATTTTTGTTTTTGC 57.820 29.630 3.32 0.00 0.00 3.68
193 194 7.652727 TGGCCTTTATTATTTTTGTTTTTGCC 58.347 30.769 3.32 0.00 0.00 4.52
194 195 7.087639 GGCCTTTATTATTTTTGTTTTTGCCC 58.912 34.615 0.00 0.00 0.00 5.36
195 196 6.799441 GCCTTTATTATTTTTGTTTTTGCCCG 59.201 34.615 0.00 0.00 0.00 6.13
196 197 7.301789 CCTTTATTATTTTTGTTTTTGCCCGG 58.698 34.615 0.00 0.00 0.00 5.73
197 198 7.041030 CCTTTATTATTTTTGTTTTTGCCCGGT 60.041 33.333 0.00 0.00 0.00 5.28
198 199 7.803279 TTATTATTTTTGTTTTTGCCCGGTT 57.197 28.000 0.00 0.00 0.00 4.44
199 200 6.701145 ATTATTTTTGTTTTTGCCCGGTTT 57.299 29.167 0.00 0.00 0.00 3.27
200 201 6.510879 TTATTTTTGTTTTTGCCCGGTTTT 57.489 29.167 0.00 0.00 0.00 2.43
201 202 4.421033 TTTTTGTTTTTGCCCGGTTTTC 57.579 36.364 0.00 0.00 0.00 2.29
202 203 2.025589 TTGTTTTTGCCCGGTTTTCC 57.974 45.000 0.00 0.00 0.00 3.13
221 222 9.338291 GGTTTTCCGTAATTAACTGAGAAATTC 57.662 33.333 0.00 0.00 0.00 2.17
224 225 9.720769 TTTCCGTAATTAACTGAGAAATTCTCT 57.279 29.630 21.89 6.52 43.73 3.10
225 226 9.720769 TTCCGTAATTAACTGAGAAATTCTCTT 57.279 29.630 21.89 12.38 43.73 2.85
226 227 9.367444 TCCGTAATTAACTGAGAAATTCTCTTC 57.633 33.333 21.89 0.00 43.73 2.87
227 228 9.372369 CCGTAATTAACTGAGAAATTCTCTTCT 57.628 33.333 21.89 9.73 43.73 2.85
229 230 9.980780 GTAATTAACTGAGAAATTCTCTTCTGC 57.019 33.333 21.89 0.00 43.73 4.26
230 231 8.860780 AATTAACTGAGAAATTCTCTTCTGCT 57.139 30.769 21.89 5.99 43.73 4.24
231 232 8.860780 ATTAACTGAGAAATTCTCTTCTGCTT 57.139 30.769 21.89 8.06 43.73 3.91
232 233 9.950496 ATTAACTGAGAAATTCTCTTCTGCTTA 57.050 29.630 21.89 7.28 43.73 3.09
233 234 9.778741 TTAACTGAGAAATTCTCTTCTGCTTAA 57.221 29.630 21.89 11.57 43.73 1.85
234 235 8.860780 AACTGAGAAATTCTCTTCTGCTTAAT 57.139 30.769 21.89 0.00 43.73 1.40
235 236 8.860780 ACTGAGAAATTCTCTTCTGCTTAATT 57.139 30.769 21.89 0.00 43.73 1.40
236 237 9.950496 ACTGAGAAATTCTCTTCTGCTTAATTA 57.050 29.630 21.89 0.00 43.73 1.40
247 248 8.839310 TCTTCTGCTTAATTAATAGATGAGGC 57.161 34.615 16.19 8.49 0.00 4.70
248 249 8.432013 TCTTCTGCTTAATTAATAGATGAGGCA 58.568 33.333 16.19 11.39 0.00 4.75
249 250 8.978874 TTCTGCTTAATTAATAGATGAGGCAA 57.021 30.769 11.09 0.79 0.00 4.52
250 251 9.578576 TTCTGCTTAATTAATAGATGAGGCAAT 57.421 29.630 11.09 0.00 0.00 3.56
251 252 9.224267 TCTGCTTAATTAATAGATGAGGCAATC 57.776 33.333 0.00 0.00 0.00 2.67
252 253 9.228949 CTGCTTAATTAATAGATGAGGCAATCT 57.771 33.333 0.00 7.70 40.12 2.40
253 254 9.578576 TGCTTAATTAATAGATGAGGCAATCTT 57.421 29.630 7.86 0.00 37.98 2.40
264 265 4.743018 CAATCTTTGCCTCGGGGT 57.257 55.556 1.62 0.00 34.45 4.95
265 266 2.961424 CAATCTTTGCCTCGGGGTT 58.039 52.632 1.62 0.00 34.45 4.11
266 267 1.256812 CAATCTTTGCCTCGGGGTTT 58.743 50.000 1.62 0.00 34.45 3.27
267 268 1.202348 CAATCTTTGCCTCGGGGTTTC 59.798 52.381 1.62 0.00 34.45 2.78
268 269 0.698818 ATCTTTGCCTCGGGGTTTCT 59.301 50.000 1.62 0.00 34.45 2.52
269 270 1.354101 TCTTTGCCTCGGGGTTTCTA 58.646 50.000 1.62 0.00 34.45 2.10
270 271 1.002773 TCTTTGCCTCGGGGTTTCTAC 59.997 52.381 1.62 0.00 34.45 2.59
271 272 1.003233 CTTTGCCTCGGGGTTTCTACT 59.997 52.381 1.62 0.00 34.45 2.57
272 273 0.323629 TTGCCTCGGGGTTTCTACTG 59.676 55.000 1.62 0.00 34.45 2.74
273 274 0.834687 TGCCTCGGGGTTTCTACTGT 60.835 55.000 1.62 0.00 34.45 3.55
274 275 0.323957 GCCTCGGGGTTTCTACTGTT 59.676 55.000 1.62 0.00 34.45 3.16
275 276 1.675116 GCCTCGGGGTTTCTACTGTTC 60.675 57.143 1.62 0.00 34.45 3.18
276 277 1.900486 CCTCGGGGTTTCTACTGTTCT 59.100 52.381 0.00 0.00 0.00 3.01
277 278 3.094572 CCTCGGGGTTTCTACTGTTCTA 58.905 50.000 0.00 0.00 0.00 2.10
278 279 3.119209 CCTCGGGGTTTCTACTGTTCTAC 60.119 52.174 0.00 0.00 0.00 2.59
279 280 3.499338 TCGGGGTTTCTACTGTTCTACA 58.501 45.455 0.00 0.00 0.00 2.74
280 281 4.091549 TCGGGGTTTCTACTGTTCTACAT 58.908 43.478 0.00 0.00 0.00 2.29
281 282 4.081862 TCGGGGTTTCTACTGTTCTACATG 60.082 45.833 0.00 0.00 0.00 3.21
282 283 4.322499 CGGGGTTTCTACTGTTCTACATGT 60.322 45.833 2.69 2.69 0.00 3.21
283 284 5.557866 GGGGTTTCTACTGTTCTACATGTT 58.442 41.667 2.30 0.00 0.00 2.71
284 285 5.411669 GGGGTTTCTACTGTTCTACATGTTG 59.588 44.000 2.30 1.19 0.00 3.33
285 286 5.411669 GGGTTTCTACTGTTCTACATGTTGG 59.588 44.000 2.30 0.00 0.00 3.77
286 287 5.411669 GGTTTCTACTGTTCTACATGTTGGG 59.588 44.000 2.30 0.00 0.00 4.12
287 288 4.819105 TCTACTGTTCTACATGTTGGGG 57.181 45.455 2.30 0.00 0.00 4.96
288 289 2.879103 ACTGTTCTACATGTTGGGGG 57.121 50.000 2.30 0.00 0.00 5.40
289 290 1.271926 ACTGTTCTACATGTTGGGGGC 60.272 52.381 2.30 0.00 0.00 5.80
290 291 0.774276 TGTTCTACATGTTGGGGGCA 59.226 50.000 2.30 0.00 0.00 5.36
291 292 1.271871 TGTTCTACATGTTGGGGGCAG 60.272 52.381 2.30 0.00 0.00 4.85
292 293 1.004277 GTTCTACATGTTGGGGGCAGA 59.996 52.381 2.30 0.00 0.00 4.26
293 294 0.618458 TCTACATGTTGGGGGCAGAC 59.382 55.000 2.30 0.00 0.00 3.51
294 295 0.394352 CTACATGTTGGGGGCAGACC 60.394 60.000 2.30 0.00 39.11 3.85
295 296 1.136961 TACATGTTGGGGGCAGACCA 61.137 55.000 2.30 0.00 42.91 4.02
296 297 1.978617 CATGTTGGGGGCAGACCAC 60.979 63.158 0.00 0.00 45.74 4.16
297 298 2.162906 ATGTTGGGGGCAGACCACT 61.163 57.895 0.00 0.00 45.72 4.00
298 299 1.729267 ATGTTGGGGGCAGACCACTT 61.729 55.000 0.00 0.00 45.72 3.16
312 313 4.335874 CAGACCACTTCGTACAGTATAGCT 59.664 45.833 0.00 0.00 0.00 3.32
313 314 5.526479 CAGACCACTTCGTACAGTATAGCTA 59.474 44.000 0.00 0.00 0.00 3.32
314 315 6.205076 CAGACCACTTCGTACAGTATAGCTAT 59.795 42.308 11.77 11.77 0.00 2.97
318 319 5.241064 CACTTCGTACAGTATAGCTATGGGT 59.759 44.000 16.77 12.96 0.00 4.51
319 320 6.429078 CACTTCGTACAGTATAGCTATGGGTA 59.571 42.308 16.77 12.04 0.00 3.69
320 321 6.654161 ACTTCGTACAGTATAGCTATGGGTAG 59.346 42.308 16.77 7.95 0.00 3.18
386 389 0.249911 AGCTGACCAACTCCGTTCAC 60.250 55.000 0.00 0.00 0.00 3.18
437 443 0.248949 GTACGCGGGGAGATCTGTTC 60.249 60.000 12.47 0.00 0.00 3.18
439 445 2.107141 GCGGGGAGATCTGTTCCG 59.893 66.667 18.31 18.31 43.13 4.30
492 530 6.762108 CGAGTACGTAAATTTCTTGCTCATT 58.238 36.000 0.00 0.00 34.56 2.57
497 535 4.795278 CGTAAATTTCTTGCTCATTGGCTC 59.205 41.667 0.00 0.00 0.00 4.70
508 547 1.536766 TCATTGGCTCAGCTCAAAACG 59.463 47.619 0.00 0.00 0.00 3.60
534 579 3.994392 GCGCCATTAGATAGAAATCCGAA 59.006 43.478 0.00 0.00 31.98 4.30
570 616 4.921644 TTTTCCCTTTTCCGACTCCTAT 57.078 40.909 0.00 0.00 0.00 2.57
571 617 4.921644 TTTCCCTTTTCCGACTCCTATT 57.078 40.909 0.00 0.00 0.00 1.73
572 618 4.921644 TTCCCTTTTCCGACTCCTATTT 57.078 40.909 0.00 0.00 0.00 1.40
573 619 4.921644 TCCCTTTTCCGACTCCTATTTT 57.078 40.909 0.00 0.00 0.00 1.82
574 620 4.585879 TCCCTTTTCCGACTCCTATTTTG 58.414 43.478 0.00 0.00 0.00 2.44
575 621 4.287585 TCCCTTTTCCGACTCCTATTTTGA 59.712 41.667 0.00 0.00 0.00 2.69
576 622 5.007682 CCCTTTTCCGACTCCTATTTTGAA 58.992 41.667 0.00 0.00 0.00 2.69
577 623 5.475564 CCCTTTTCCGACTCCTATTTTGAAA 59.524 40.000 0.00 0.00 0.00 2.69
578 624 6.379386 CCTTTTCCGACTCCTATTTTGAAAC 58.621 40.000 0.00 0.00 0.00 2.78
579 625 5.600908 TTTCCGACTCCTATTTTGAAACG 57.399 39.130 0.00 0.00 0.00 3.60
580 626 4.261578 TCCGACTCCTATTTTGAAACGT 57.738 40.909 0.00 0.00 0.00 3.99
581 627 4.634199 TCCGACTCCTATTTTGAAACGTT 58.366 39.130 0.00 0.00 0.00 3.99
582 628 5.782047 TCCGACTCCTATTTTGAAACGTTA 58.218 37.500 0.00 0.00 0.00 3.18
583 629 5.865552 TCCGACTCCTATTTTGAAACGTTAG 59.134 40.000 0.00 0.00 0.00 2.34
584 630 5.636543 CCGACTCCTATTTTGAAACGTTAGT 59.363 40.000 0.00 0.00 0.00 2.24
585 631 6.808212 CCGACTCCTATTTTGAAACGTTAGTA 59.192 38.462 0.00 0.00 0.00 1.82
586 632 7.201384 CCGACTCCTATTTTGAAACGTTAGTAC 60.201 40.741 0.00 0.00 0.00 2.73
587 633 7.326789 CGACTCCTATTTTGAAACGTTAGTACA 59.673 37.037 0.00 0.00 0.00 2.90
588 634 8.891671 ACTCCTATTTTGAAACGTTAGTACAA 57.108 30.769 0.00 3.75 0.00 2.41
589 635 9.328845 ACTCCTATTTTGAAACGTTAGTACAAA 57.671 29.630 0.00 9.59 36.12 2.83
596 642 9.843334 TTTTGAAACGTTAGTACAAAATTGAGT 57.157 25.926 20.53 0.00 39.40 3.41
597 643 9.493206 TTTGAAACGTTAGTACAAAATTGAGTC 57.507 29.630 0.00 0.00 35.52 3.36
598 644 8.199176 TGAAACGTTAGTACAAAATTGAGTCA 57.801 30.769 0.00 0.00 0.00 3.41
599 645 8.832521 TGAAACGTTAGTACAAAATTGAGTCAT 58.167 29.630 0.00 0.00 0.00 3.06
600 646 9.314501 GAAACGTTAGTACAAAATTGAGTCATC 57.685 33.333 0.00 0.00 0.00 2.92
601 647 8.603242 AACGTTAGTACAAAATTGAGTCATCT 57.397 30.769 0.00 0.00 0.00 2.90
602 648 9.701098 AACGTTAGTACAAAATTGAGTCATCTA 57.299 29.630 0.00 0.00 0.00 1.98
603 649 9.871238 ACGTTAGTACAAAATTGAGTCATCTAT 57.129 29.630 0.00 0.00 0.00 1.98
615 661 9.831737 AATTGAGTCATCTATTTTGAAACGAAG 57.168 29.630 0.00 0.00 28.12 3.79
616 662 7.364522 TGAGTCATCTATTTTGAAACGAAGG 57.635 36.000 0.00 0.00 0.00 3.46
617 663 6.371548 TGAGTCATCTATTTTGAAACGAAGGG 59.628 38.462 0.00 0.00 0.00 3.95
618 664 6.472887 AGTCATCTATTTTGAAACGAAGGGA 58.527 36.000 0.00 0.00 0.00 4.20
619 665 6.595716 AGTCATCTATTTTGAAACGAAGGGAG 59.404 38.462 0.00 0.00 0.00 4.30
620 666 6.371825 GTCATCTATTTTGAAACGAAGGGAGT 59.628 38.462 0.00 0.00 0.00 3.85
627 673 2.886523 TGAAACGAAGGGAGTACGAGAA 59.113 45.455 0.00 0.00 0.00 2.87
629 675 4.021719 TGAAACGAAGGGAGTACGAGAATT 60.022 41.667 0.00 0.00 0.00 2.17
638 684 3.430895 GGAGTACGAGAATTTTTGACGCA 59.569 43.478 0.00 0.00 0.00 5.24
642 688 1.804151 CGAGAATTTTTGACGCAGGGA 59.196 47.619 0.00 0.00 0.00 4.20
658 704 1.115930 GGGATAAGCGGAGGCAGAGA 61.116 60.000 0.00 0.00 43.41 3.10
1030 1179 3.842925 AAGCAATGGACGCGGGTGT 62.843 57.895 10.96 0.00 0.00 4.16
1675 1827 4.047125 CCGAGGTGCCCCAATGGT 62.047 66.667 0.00 0.00 36.04 3.55
1689 1841 2.129555 AATGGTTGTCCGCTGAGGCT 62.130 55.000 0.00 0.00 40.77 4.58
1692 1844 0.321298 GGTTGTCCGCTGAGGCTAAA 60.321 55.000 0.00 0.00 40.77 1.85
1731 1883 2.125753 GTCAGGCAGACCAGCGAG 60.126 66.667 0.00 0.00 41.56 5.03
1922 2110 3.113824 AGAGGAGGATCAGAGCATTGTT 58.886 45.455 0.00 0.00 36.25 2.83
2077 2277 3.735237 TCACCAGTGAAGAAGAGTCAC 57.265 47.619 0.00 0.00 44.75 3.67
2155 2361 0.662619 CAACGCAGGACAAGAAGCAA 59.337 50.000 0.00 0.00 0.00 3.91
2170 2382 6.127814 ACAAGAAGCAAACGATGATGATGATT 60.128 34.615 0.00 0.00 0.00 2.57
2171 2383 6.057627 AGAAGCAAACGATGATGATGATTC 57.942 37.500 0.00 0.00 36.84 2.52
2172 2384 5.587443 AGAAGCAAACGATGATGATGATTCA 59.413 36.000 5.10 0.00 38.49 2.57
2173 2385 5.419760 AGCAAACGATGATGATGATTCAG 57.580 39.130 0.00 0.00 34.73 3.02
2188 2400 1.938585 TTCAGCAGTAGTAGGGCACT 58.061 50.000 0.00 0.00 41.62 4.40
2235 2456 3.589988 AGCTTCTCACCAATTAGTGTCG 58.410 45.455 3.91 0.00 38.91 4.35
2373 2615 1.429021 CCCATTGCGACACGATTGG 59.571 57.895 0.00 0.00 0.00 3.16
2417 2666 0.386478 GGTCGCAACTAACTCGTCGT 60.386 55.000 0.00 0.00 0.00 4.34
2428 2981 1.796355 CTCGTCGTTCGTCGTGCAT 60.796 57.895 10.78 0.00 40.80 3.96
2444 2997 0.447801 GCATTTCTGGATCGCGTGTT 59.552 50.000 5.77 0.00 0.00 3.32
2472 3025 0.966179 TGACACGTACTCCATGCTGT 59.034 50.000 0.00 0.00 0.00 4.40
2481 3034 1.179152 CTCCATGCTGTTCCATTGCA 58.821 50.000 0.00 0.00 41.13 4.08
2492 3045 5.627499 TGTTCCATTGCATGTTTCTAGAC 57.373 39.130 0.00 0.00 0.00 2.59
2499 3052 4.456280 TGCATGTTTCTAGACTGACGAT 57.544 40.909 0.00 0.00 0.00 3.73
2501 3054 6.149129 TGCATGTTTCTAGACTGACGATAT 57.851 37.500 0.00 0.00 0.00 1.63
2505 3058 7.643579 CATGTTTCTAGACTGACGATATCTGA 58.356 38.462 0.34 0.00 0.00 3.27
2506 3059 7.625828 TGTTTCTAGACTGACGATATCTGAA 57.374 36.000 0.34 0.00 0.00 3.02
2526 3079 5.790593 TGAAAGAGGCTCTTGTTTATACGT 58.209 37.500 29.19 11.08 36.71 3.57
2532 3085 4.466726 AGGCTCTTGTTTATACGTTCTCCT 59.533 41.667 0.00 0.00 0.00 3.69
2537 3090 8.167345 GCTCTTGTTTATACGTTCTCCTTTTAC 58.833 37.037 0.00 0.00 0.00 2.01
2542 3095 8.296713 TGTTTATACGTTCTCCTTTTACTACGT 58.703 33.333 0.00 0.00 43.58 3.57
2558 4214 3.618774 CGTAAGTACTCCCTGCGTC 57.381 57.895 0.00 0.00 0.00 5.19
2570 4226 1.466167 CCCTGCGTCTCAAAATGAGTG 59.534 52.381 7.21 3.35 44.58 3.51
2572 4228 2.549754 CCTGCGTCTCAAAATGAGTGTT 59.450 45.455 7.21 0.00 44.58 3.32
2619 4275 8.798859 ACATAAGTTAGTACTCTCTCCGTTTA 57.201 34.615 0.00 0.00 31.99 2.01
2630 4286 5.526846 ACTCTCTCCGTTTATACTTAGTCCG 59.473 44.000 0.00 0.00 0.00 4.79
2631 4287 4.818546 TCTCTCCGTTTATACTTAGTCCGG 59.181 45.833 0.00 0.00 35.41 5.14
2654 4310 4.153475 GCGTAGTAGCTTTGGTCAAAATCA 59.847 41.667 0.00 0.00 0.00 2.57
2655 4311 5.334569 GCGTAGTAGCTTTGGTCAAAATCAA 60.335 40.000 0.00 0.00 0.00 2.57
2656 4312 6.307155 CGTAGTAGCTTTGGTCAAAATCAAG 58.693 40.000 0.00 0.00 0.00 3.02
2657 4313 5.126396 AGTAGCTTTGGTCAAAATCAAGC 57.874 39.130 0.00 0.00 0.00 4.01
2658 4314 4.829492 AGTAGCTTTGGTCAAAATCAAGCT 59.171 37.500 9.50 9.50 34.43 3.74
2659 4315 4.248691 AGCTTTGGTCAAAATCAAGCTC 57.751 40.909 0.00 0.00 0.00 4.09
2660 4316 3.893813 AGCTTTGGTCAAAATCAAGCTCT 59.106 39.130 0.00 0.00 0.00 4.09
2661 4317 5.072741 AGCTTTGGTCAAAATCAAGCTCTA 58.927 37.500 0.00 0.00 0.00 2.43
2670 4326 8.349983 GGTCAAAATCAAGCTCTACAAACTTTA 58.650 33.333 0.00 0.00 0.00 1.85
2750 4406 0.331616 AAAAGGAGAATGACCCCCGG 59.668 55.000 0.00 0.00 0.00 5.73
2756 4412 3.406595 GAATGACCCCCGGCCTCTG 62.407 68.421 0.00 0.00 0.00 3.35
2764 4420 1.526887 CCCGGCCTCTGCATTTAGA 59.473 57.895 0.00 0.00 40.13 2.10
2765 4421 0.815615 CCCGGCCTCTGCATTTAGAC 60.816 60.000 0.00 0.00 40.13 2.59
2776 4432 1.003116 GCATTTAGACGATGCAGGCAG 60.003 52.381 0.00 0.00 46.96 4.85
2777 4433 2.283298 CATTTAGACGATGCAGGCAGT 58.717 47.619 0.00 0.00 0.00 4.40
2779 4435 0.179137 TTAGACGATGCAGGCAGTCG 60.179 55.000 17.94 17.94 40.91 4.18
2797 4453 8.303876 AGGCAGTCGTTTTGTTAATTATTCATT 58.696 29.630 0.00 0.00 0.00 2.57
2837 4494 4.174009 ACATCAATAGGTCTGAAACGACG 58.826 43.478 0.00 0.00 34.75 5.12
2851 4508 4.509970 TGAAACGACGATCTTGACAACATT 59.490 37.500 0.00 0.00 0.00 2.71
2853 4510 4.389664 ACGACGATCTTGACAACATTTG 57.610 40.909 0.00 0.00 0.00 2.32
2870 4527 5.109903 ACATTTGTCGCTACTCCTATTCAC 58.890 41.667 0.00 0.00 0.00 3.18
2871 4528 3.795623 TTGTCGCTACTCCTATTCACC 57.204 47.619 0.00 0.00 0.00 4.02
2907 4564 3.031736 AGATTGTGTGAGCCGTATACCT 58.968 45.455 0.00 0.00 0.00 3.08
2911 4568 3.623703 TGTGTGAGCCGTATACCTAGAA 58.376 45.455 0.00 0.00 0.00 2.10
2919 4576 3.243334 GCCGTATACCTAGAAGTCACACC 60.243 52.174 0.00 0.00 0.00 4.16
2923 4580 6.392354 CGTATACCTAGAAGTCACACCAAAA 58.608 40.000 0.00 0.00 0.00 2.44
2964 4621 1.042559 CCCCAACCAAGCCGCAATAT 61.043 55.000 0.00 0.00 0.00 1.28
2978 4635 2.216898 GCAATATCAGGTCTGAGGCAC 58.783 52.381 6.81 0.00 43.61 5.01
3037 4694 4.385405 GCTGCAGAGGCCGTCACT 62.385 66.667 20.43 0.00 40.13 3.41
3049 4706 0.109412 CCGTCACTACCGTCTTCCAC 60.109 60.000 0.00 0.00 0.00 4.02
3052 4709 0.538057 TCACTACCGTCTTCCACCGT 60.538 55.000 0.00 0.00 0.00 4.83
3063 4720 2.571653 TCTTCCACCGTTCCATCTTCAT 59.428 45.455 0.00 0.00 0.00 2.57
3095 4752 1.077501 GCATCTACCTTGCCAGGCA 60.078 57.895 11.22 11.22 45.56 4.75
3099 4756 2.438254 TACCTTGCCAGGCATGCG 60.438 61.111 17.09 13.70 45.56 4.73
3100 4757 3.266686 TACCTTGCCAGGCATGCGT 62.267 57.895 17.09 18.36 45.56 5.24
3101 4758 3.818787 CCTTGCCAGGCATGCGTC 61.819 66.667 17.09 0.68 38.76 5.19
3102 4759 4.170062 CTTGCCAGGCATGCGTCG 62.170 66.667 17.09 5.12 38.76 5.12
3103 4760 4.695993 TTGCCAGGCATGCGTCGA 62.696 61.111 17.09 0.00 38.76 4.20
3115 4772 4.107051 CGTCGACGCTACCCCGTT 62.107 66.667 26.59 0.00 42.24 4.44
3116 4773 2.505557 GTCGACGCTACCCCGTTG 60.506 66.667 0.00 0.00 42.24 4.10
3117 4774 2.985282 TCGACGCTACCCCGTTGT 60.985 61.111 0.00 0.00 42.24 3.32
3149 4868 4.831307 ACTCGCCGTCGTCGATGC 62.831 66.667 9.02 9.04 39.71 3.91
3158 4877 1.607713 GTCGTCGATGCGATAGATGG 58.392 55.000 0.00 0.00 43.07 3.51
3159 4878 0.109735 TCGTCGATGCGATAGATGGC 60.110 55.000 0.00 0.00 38.42 4.40
3162 4881 0.038251 TCGATGCGATAGATGGCCAC 60.038 55.000 8.16 1.58 39.76 5.01
3176 4895 2.046892 CCACCGCTCCACTCCTTG 60.047 66.667 0.00 0.00 0.00 3.61
3183 4902 1.216710 CTCCACTCCTTGCGTCCTC 59.783 63.158 0.00 0.00 0.00 3.71
3185 4904 2.583441 CCACTCCTTGCGTCCTCCA 61.583 63.158 0.00 0.00 0.00 3.86
3187 4906 0.742281 CACTCCTTGCGTCCTCCATG 60.742 60.000 0.00 0.00 0.00 3.66
3258 4977 1.735973 CCGGCATCGTCAGATCTGA 59.264 57.895 21.67 21.67 34.23 3.27
3266 4985 2.495084 TCGTCAGATCTGAGATACCCG 58.505 52.381 25.76 22.13 40.75 5.28
3294 5013 3.371097 TTTCCCCTAGAGCAGCGCG 62.371 63.158 0.00 0.00 0.00 6.86
3341 5060 3.369835 GATGCCTTCGACAAAGTAACG 57.630 47.619 0.00 0.00 32.69 3.18
3342 5061 1.504359 TGCCTTCGACAAAGTAACGG 58.496 50.000 0.00 0.00 32.69 4.44
3407 5126 2.855514 TTTTCACCGGCAGCCAAGC 61.856 57.895 13.30 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.024302 CGTCAAAAGAACAGTAGAAACCCC 60.024 45.833 0.00 0.00 0.00 4.95
1 2 4.812626 TCGTCAAAAGAACAGTAGAAACCC 59.187 41.667 0.00 0.00 0.00 4.11
2 3 5.978934 TCGTCAAAAGAACAGTAGAAACC 57.021 39.130 0.00 0.00 0.00 3.27
3 4 8.836959 AAAATCGTCAAAAGAACAGTAGAAAC 57.163 30.769 0.00 0.00 0.00 2.78
4 5 8.126700 GGAAAATCGTCAAAAGAACAGTAGAAA 58.873 33.333 0.00 0.00 0.00 2.52
5 6 7.281324 TGGAAAATCGTCAAAAGAACAGTAGAA 59.719 33.333 0.00 0.00 0.00 2.10
6 7 6.764085 TGGAAAATCGTCAAAAGAACAGTAGA 59.236 34.615 0.00 0.00 0.00 2.59
7 8 6.954944 TGGAAAATCGTCAAAAGAACAGTAG 58.045 36.000 0.00 0.00 0.00 2.57
8 9 6.928979 TGGAAAATCGTCAAAAGAACAGTA 57.071 33.333 0.00 0.00 0.00 2.74
9 10 5.828299 TGGAAAATCGTCAAAAGAACAGT 57.172 34.783 0.00 0.00 0.00 3.55
10 11 5.630680 CCATGGAAAATCGTCAAAAGAACAG 59.369 40.000 5.56 0.00 0.00 3.16
11 12 5.527951 CCATGGAAAATCGTCAAAAGAACA 58.472 37.500 5.56 0.00 0.00 3.18
12 13 4.385748 GCCATGGAAAATCGTCAAAAGAAC 59.614 41.667 18.40 0.00 0.00 3.01
13 14 4.555262 GCCATGGAAAATCGTCAAAAGAA 58.445 39.130 18.40 0.00 0.00 2.52
14 15 3.365868 CGCCATGGAAAATCGTCAAAAGA 60.366 43.478 18.40 0.00 0.00 2.52
15 16 2.916716 CGCCATGGAAAATCGTCAAAAG 59.083 45.455 18.40 0.00 0.00 2.27
16 17 2.294791 ACGCCATGGAAAATCGTCAAAA 59.705 40.909 18.40 0.00 0.00 2.44
17 18 1.883275 ACGCCATGGAAAATCGTCAAA 59.117 42.857 18.40 0.00 0.00 2.69
18 19 1.466950 GACGCCATGGAAAATCGTCAA 59.533 47.619 26.85 0.00 45.94 3.18
19 20 1.083489 GACGCCATGGAAAATCGTCA 58.917 50.000 26.85 0.00 45.94 4.35
20 21 1.062587 CTGACGCCATGGAAAATCGTC 59.937 52.381 25.76 25.76 46.58 4.20
21 22 1.086696 CTGACGCCATGGAAAATCGT 58.913 50.000 18.40 15.38 35.98 3.73
22 23 0.248215 GCTGACGCCATGGAAAATCG 60.248 55.000 18.40 11.79 0.00 3.34
23 24 1.098050 AGCTGACGCCATGGAAAATC 58.902 50.000 18.40 6.98 36.60 2.17
24 25 1.549203 AAGCTGACGCCATGGAAAAT 58.451 45.000 18.40 0.00 36.60 1.82
25 26 1.327303 AAAGCTGACGCCATGGAAAA 58.673 45.000 18.40 0.00 36.60 2.29
26 27 1.000385 CAAAAGCTGACGCCATGGAAA 60.000 47.619 18.40 0.00 36.60 3.13
27 28 0.597568 CAAAAGCTGACGCCATGGAA 59.402 50.000 18.40 0.00 36.60 3.53
28 29 1.865788 GCAAAAGCTGACGCCATGGA 61.866 55.000 18.40 0.00 36.60 3.41
29 30 1.444895 GCAAAAGCTGACGCCATGG 60.445 57.895 7.63 7.63 36.60 3.66
30 31 0.038892 AAGCAAAAGCTGACGCCATG 60.039 50.000 0.00 0.00 36.60 3.66
31 32 0.038892 CAAGCAAAAGCTGACGCCAT 60.039 50.000 0.00 0.00 36.60 4.40
32 33 1.359833 CAAGCAAAAGCTGACGCCA 59.640 52.632 0.00 0.00 36.60 5.69
33 34 1.372128 CCAAGCAAAAGCTGACGCC 60.372 57.895 0.00 0.00 36.60 5.68
34 35 0.249031 AACCAAGCAAAAGCTGACGC 60.249 50.000 0.00 0.00 0.00 5.19
35 36 1.854126 CAAACCAAGCAAAAGCTGACG 59.146 47.619 0.00 0.00 0.00 4.35
36 37 2.892374 ACAAACCAAGCAAAAGCTGAC 58.108 42.857 0.00 0.00 0.00 3.51
37 38 3.195396 AGAACAAACCAAGCAAAAGCTGA 59.805 39.130 0.00 0.00 0.00 4.26
38 39 3.524541 AGAACAAACCAAGCAAAAGCTG 58.475 40.909 0.00 0.00 0.00 4.24
39 40 3.893326 AGAACAAACCAAGCAAAAGCT 57.107 38.095 0.00 0.00 0.00 3.74
40 41 4.033243 CAGAAGAACAAACCAAGCAAAAGC 59.967 41.667 0.00 0.00 0.00 3.51
41 42 5.410067 TCAGAAGAACAAACCAAGCAAAAG 58.590 37.500 0.00 0.00 0.00 2.27
42 43 5.047377 ACTCAGAAGAACAAACCAAGCAAAA 60.047 36.000 0.00 0.00 0.00 2.44
43 44 4.462483 ACTCAGAAGAACAAACCAAGCAAA 59.538 37.500 0.00 0.00 0.00 3.68
44 45 4.016444 ACTCAGAAGAACAAACCAAGCAA 58.984 39.130 0.00 0.00 0.00 3.91
45 46 3.620488 ACTCAGAAGAACAAACCAAGCA 58.380 40.909 0.00 0.00 0.00 3.91
46 47 4.336713 AGAACTCAGAAGAACAAACCAAGC 59.663 41.667 0.00 0.00 0.00 4.01
47 48 6.442513 AAGAACTCAGAAGAACAAACCAAG 57.557 37.500 0.00 0.00 0.00 3.61
48 49 6.208599 ACAAAGAACTCAGAAGAACAAACCAA 59.791 34.615 0.00 0.00 0.00 3.67
49 50 5.710099 ACAAAGAACTCAGAAGAACAAACCA 59.290 36.000 0.00 0.00 0.00 3.67
50 51 6.196079 ACAAAGAACTCAGAAGAACAAACC 57.804 37.500 0.00 0.00 0.00 3.27
51 52 8.665685 TCTTACAAAGAACTCAGAAGAACAAAC 58.334 33.333 0.00 0.00 33.83 2.93
52 53 8.786826 TCTTACAAAGAACTCAGAAGAACAAA 57.213 30.769 0.00 0.00 33.83 2.83
53 54 8.041323 ACTCTTACAAAGAACTCAGAAGAACAA 58.959 33.333 0.00 0.00 37.02 2.83
54 55 7.556844 ACTCTTACAAAGAACTCAGAAGAACA 58.443 34.615 0.00 0.00 37.02 3.18
55 56 7.096394 CGACTCTTACAAAGAACTCAGAAGAAC 60.096 40.741 0.00 0.00 37.02 3.01
56 57 6.918569 CGACTCTTACAAAGAACTCAGAAGAA 59.081 38.462 0.00 0.00 37.02 2.52
57 58 6.439599 CGACTCTTACAAAGAACTCAGAAGA 58.560 40.000 0.00 0.00 37.02 2.87
58 59 5.631512 CCGACTCTTACAAAGAACTCAGAAG 59.368 44.000 0.00 0.00 37.02 2.85
59 60 5.301045 TCCGACTCTTACAAAGAACTCAGAA 59.699 40.000 0.00 0.00 37.02 3.02
60 61 4.825634 TCCGACTCTTACAAAGAACTCAGA 59.174 41.667 0.00 0.00 37.02 3.27
61 62 5.122512 TCCGACTCTTACAAAGAACTCAG 57.877 43.478 0.00 0.00 37.02 3.35
62 63 4.583489 ACTCCGACTCTTACAAAGAACTCA 59.417 41.667 0.00 0.00 37.02 3.41
63 64 5.123805 ACTCCGACTCTTACAAAGAACTC 57.876 43.478 0.00 0.00 37.02 3.01
64 65 5.163437 ACAACTCCGACTCTTACAAAGAACT 60.163 40.000 0.00 0.00 37.02 3.01
65 66 5.048507 ACAACTCCGACTCTTACAAAGAAC 58.951 41.667 0.00 0.00 37.02 3.01
66 67 5.272283 ACAACTCCGACTCTTACAAAGAA 57.728 39.130 0.00 0.00 37.02 2.52
67 68 4.931661 ACAACTCCGACTCTTACAAAGA 57.068 40.909 0.00 0.00 35.87 2.52
68 69 8.928270 ATAATACAACTCCGACTCTTACAAAG 57.072 34.615 0.00 0.00 0.00 2.77
69 70 8.746530 AGATAATACAACTCCGACTCTTACAAA 58.253 33.333 0.00 0.00 0.00 2.83
70 71 8.188799 CAGATAATACAACTCCGACTCTTACAA 58.811 37.037 0.00 0.00 0.00 2.41
71 72 7.201794 CCAGATAATACAACTCCGACTCTTACA 60.202 40.741 0.00 0.00 0.00 2.41
72 73 7.140048 CCAGATAATACAACTCCGACTCTTAC 58.860 42.308 0.00 0.00 0.00 2.34
73 74 6.238953 GCCAGATAATACAACTCCGACTCTTA 60.239 42.308 0.00 0.00 0.00 2.10
74 75 5.452077 GCCAGATAATACAACTCCGACTCTT 60.452 44.000 0.00 0.00 0.00 2.85
75 76 4.038162 GCCAGATAATACAACTCCGACTCT 59.962 45.833 0.00 0.00 0.00 3.24
76 77 4.299978 GCCAGATAATACAACTCCGACTC 58.700 47.826 0.00 0.00 0.00 3.36
77 78 3.069729 GGCCAGATAATACAACTCCGACT 59.930 47.826 0.00 0.00 0.00 4.18
78 79 3.391049 GGCCAGATAATACAACTCCGAC 58.609 50.000 0.00 0.00 0.00 4.79
79 80 2.035449 CGGCCAGATAATACAACTCCGA 59.965 50.000 2.24 0.00 36.77 4.55
80 81 2.223971 ACGGCCAGATAATACAACTCCG 60.224 50.000 2.24 0.00 40.09 4.63
81 82 3.470645 ACGGCCAGATAATACAACTCC 57.529 47.619 2.24 0.00 0.00 3.85
82 83 4.038883 ACCTACGGCCAGATAATACAACTC 59.961 45.833 2.24 0.00 0.00 3.01
83 84 3.965347 ACCTACGGCCAGATAATACAACT 59.035 43.478 2.24 0.00 0.00 3.16
84 85 4.304939 GACCTACGGCCAGATAATACAAC 58.695 47.826 2.24 0.00 0.00 3.32
85 86 3.005050 CGACCTACGGCCAGATAATACAA 59.995 47.826 2.24 0.00 38.46 2.41
86 87 2.555325 CGACCTACGGCCAGATAATACA 59.445 50.000 2.24 0.00 38.46 2.29
87 88 2.816087 TCGACCTACGGCCAGATAATAC 59.184 50.000 2.24 0.00 42.82 1.89
88 89 2.816087 GTCGACCTACGGCCAGATAATA 59.184 50.000 3.51 0.00 41.06 0.98
89 90 1.612463 GTCGACCTACGGCCAGATAAT 59.388 52.381 3.51 0.00 41.06 1.28
90 91 1.027357 GTCGACCTACGGCCAGATAA 58.973 55.000 3.51 0.00 41.06 1.75
91 92 0.107066 TGTCGACCTACGGCCAGATA 60.107 55.000 14.12 0.00 46.81 1.98
92 93 0.755698 ATGTCGACCTACGGCCAGAT 60.756 55.000 14.12 0.00 46.81 2.90
93 94 1.379443 ATGTCGACCTACGGCCAGA 60.379 57.895 14.12 0.00 46.81 3.86
94 95 1.226974 CATGTCGACCTACGGCCAG 60.227 63.158 14.12 0.00 46.81 4.85
95 96 1.537814 AACATGTCGACCTACGGCCA 61.538 55.000 14.12 0.00 46.81 5.36
96 97 1.082117 CAACATGTCGACCTACGGCC 61.082 60.000 14.12 0.00 46.81 6.13
98 99 1.625616 GACAACATGTCGACCTACGG 58.374 55.000 14.12 2.55 37.67 4.02
107 108 3.809832 CCCATCCTAATCGACAACATGTC 59.190 47.826 0.00 0.39 43.65 3.06
108 109 3.808728 CCCATCCTAATCGACAACATGT 58.191 45.455 0.00 0.00 0.00 3.21
109 110 2.549754 GCCCATCCTAATCGACAACATG 59.450 50.000 0.00 0.00 0.00 3.21
110 111 2.439507 AGCCCATCCTAATCGACAACAT 59.560 45.455 0.00 0.00 0.00 2.71
111 112 1.837439 AGCCCATCCTAATCGACAACA 59.163 47.619 0.00 0.00 0.00 3.33
112 113 2.622064 AGCCCATCCTAATCGACAAC 57.378 50.000 0.00 0.00 0.00 3.32
113 114 3.278574 CAAAGCCCATCCTAATCGACAA 58.721 45.455 0.00 0.00 0.00 3.18
114 115 2.917933 CAAAGCCCATCCTAATCGACA 58.082 47.619 0.00 0.00 0.00 4.35
115 116 1.604278 GCAAAGCCCATCCTAATCGAC 59.396 52.381 0.00 0.00 0.00 4.20
116 117 1.476833 GGCAAAGCCCATCCTAATCGA 60.477 52.381 0.00 0.00 44.06 3.59
117 118 0.954452 GGCAAAGCCCATCCTAATCG 59.046 55.000 0.00 0.00 44.06 3.34
129 130 1.002033 CAGACACACTCAAGGCAAAGC 60.002 52.381 0.00 0.00 0.00 3.51
130 131 2.289002 GACAGACACACTCAAGGCAAAG 59.711 50.000 0.00 0.00 0.00 2.77
131 132 2.092968 AGACAGACACACTCAAGGCAAA 60.093 45.455 0.00 0.00 0.00 3.68
132 133 1.486310 AGACAGACACACTCAAGGCAA 59.514 47.619 0.00 0.00 0.00 4.52
133 134 1.069204 GAGACAGACACACTCAAGGCA 59.931 52.381 0.00 0.00 0.00 4.75
134 135 1.342819 AGAGACAGACACACTCAAGGC 59.657 52.381 0.00 0.00 33.69 4.35
135 136 2.890311 AGAGAGACAGACACACTCAAGG 59.110 50.000 0.00 0.00 33.69 3.61
136 137 3.305267 CCAGAGAGACAGACACACTCAAG 60.305 52.174 0.00 0.00 33.69 3.02
137 138 2.625314 CCAGAGAGACAGACACACTCAA 59.375 50.000 0.00 0.00 33.69 3.02
138 139 2.234143 CCAGAGAGACAGACACACTCA 58.766 52.381 0.00 0.00 33.69 3.41
139 140 1.543802 CCCAGAGAGACAGACACACTC 59.456 57.143 0.00 0.00 0.00 3.51
140 141 1.145945 TCCCAGAGAGACAGACACACT 59.854 52.381 0.00 0.00 0.00 3.55
141 142 1.543802 CTCCCAGAGAGACAGACACAC 59.456 57.143 0.00 0.00 46.50 3.82
142 143 1.145945 ACTCCCAGAGAGACAGACACA 59.854 52.381 0.00 0.00 46.50 3.72
143 144 1.543802 CACTCCCAGAGAGACAGACAC 59.456 57.143 0.00 0.00 46.50 3.67
144 145 1.548809 CCACTCCCAGAGAGACAGACA 60.549 57.143 0.00 0.00 46.50 3.41
145 146 1.181786 CCACTCCCAGAGAGACAGAC 58.818 60.000 0.00 0.00 46.50 3.51
146 147 0.040351 CCCACTCCCAGAGAGACAGA 59.960 60.000 0.00 0.00 46.50 3.41
147 148 1.612395 GCCCACTCCCAGAGAGACAG 61.612 65.000 0.00 0.00 46.50 3.51
148 149 1.610673 GCCCACTCCCAGAGAGACA 60.611 63.158 0.00 0.00 46.50 3.41
149 150 0.907230 AAGCCCACTCCCAGAGAGAC 60.907 60.000 0.00 0.00 46.50 3.36
150 151 0.906756 CAAGCCCACTCCCAGAGAGA 60.907 60.000 0.00 0.00 46.50 3.10
152 153 1.920325 CCAAGCCCACTCCCAGAGA 60.920 63.158 0.00 0.00 33.32 3.10
153 154 2.673523 CCAAGCCCACTCCCAGAG 59.326 66.667 0.00 0.00 35.52 3.35
154 155 3.650950 GCCAAGCCCACTCCCAGA 61.651 66.667 0.00 0.00 0.00 3.86
155 156 4.748144 GGCCAAGCCCACTCCCAG 62.748 72.222 0.00 0.00 44.06 4.45
165 166 9.179552 CAAAAACAAAAATAATAAAGGCCAAGC 57.820 29.630 5.01 0.00 0.00 4.01
166 167 9.179552 GCAAAAACAAAAATAATAAAGGCCAAG 57.820 29.630 5.01 0.00 0.00 3.61
167 168 8.138074 GGCAAAAACAAAAATAATAAAGGCCAA 58.862 29.630 5.01 0.00 34.47 4.52
168 169 7.255625 GGGCAAAAACAAAAATAATAAAGGCCA 60.256 33.333 5.01 0.00 35.95 5.36
169 170 7.087639 GGGCAAAAACAAAAATAATAAAGGCC 58.912 34.615 0.00 0.00 0.00 5.19
170 171 6.799441 CGGGCAAAAACAAAAATAATAAAGGC 59.201 34.615 0.00 0.00 0.00 4.35
171 172 7.041030 ACCGGGCAAAAACAAAAATAATAAAGG 60.041 33.333 6.32 0.00 0.00 3.11
172 173 7.866729 ACCGGGCAAAAACAAAAATAATAAAG 58.133 30.769 6.32 0.00 0.00 1.85
173 174 7.803279 ACCGGGCAAAAACAAAAATAATAAA 57.197 28.000 6.32 0.00 0.00 1.40
174 175 7.803279 AACCGGGCAAAAACAAAAATAATAA 57.197 28.000 6.32 0.00 0.00 1.40
175 176 7.803279 AAACCGGGCAAAAACAAAAATAATA 57.197 28.000 6.32 0.00 0.00 0.98
176 177 6.701145 AAACCGGGCAAAAACAAAAATAAT 57.299 29.167 6.32 0.00 0.00 1.28
177 178 6.404403 GGAAAACCGGGCAAAAACAAAAATAA 60.404 34.615 6.32 0.00 0.00 1.40
178 179 5.066117 GGAAAACCGGGCAAAAACAAAAATA 59.934 36.000 6.32 0.00 0.00 1.40
179 180 4.142359 GGAAAACCGGGCAAAAACAAAAAT 60.142 37.500 6.32 0.00 0.00 1.82
180 181 3.190744 GGAAAACCGGGCAAAAACAAAAA 59.809 39.130 6.32 0.00 0.00 1.94
181 182 2.747989 GGAAAACCGGGCAAAAACAAAA 59.252 40.909 6.32 0.00 0.00 2.44
182 183 2.357075 GGAAAACCGGGCAAAAACAAA 58.643 42.857 6.32 0.00 0.00 2.83
183 184 1.739371 CGGAAAACCGGGCAAAAACAA 60.739 47.619 6.32 0.00 0.00 2.83
184 185 0.179108 CGGAAAACCGGGCAAAAACA 60.179 50.000 6.32 0.00 0.00 2.83
185 186 0.179105 ACGGAAAACCGGGCAAAAAC 60.179 50.000 6.32 0.00 37.53 2.43
186 187 1.396653 TACGGAAAACCGGGCAAAAA 58.603 45.000 6.32 0.00 37.53 1.94
187 188 1.396653 TTACGGAAAACCGGGCAAAA 58.603 45.000 6.32 0.00 37.53 2.44
188 189 1.618487 ATTACGGAAAACCGGGCAAA 58.382 45.000 6.32 2.84 37.53 3.68
189 190 1.618487 AATTACGGAAAACCGGGCAA 58.382 45.000 6.32 4.72 37.53 4.52
190 191 2.486472 TAATTACGGAAAACCGGGCA 57.514 45.000 6.32 0.00 37.53 5.36
191 192 2.749076 AGTTAATTACGGAAAACCGGGC 59.251 45.455 6.32 0.00 37.53 6.13
192 193 4.002316 TCAGTTAATTACGGAAAACCGGG 58.998 43.478 6.32 0.00 37.53 5.73
193 194 4.931002 TCTCAGTTAATTACGGAAAACCGG 59.069 41.667 13.05 0.00 37.53 5.28
194 195 6.470557 TTCTCAGTTAATTACGGAAAACCG 57.529 37.500 7.12 7.12 39.31 4.44
195 196 9.338291 GAATTTCTCAGTTAATTACGGAAAACC 57.662 33.333 0.00 0.00 32.76 3.27
198 199 9.720769 AGAGAATTTCTCAGTTAATTACGGAAA 57.279 29.630 24.51 0.00 45.73 3.13
199 200 9.720769 AAGAGAATTTCTCAGTTAATTACGGAA 57.279 29.630 24.51 0.00 45.73 4.30
200 201 9.367444 GAAGAGAATTTCTCAGTTAATTACGGA 57.633 33.333 24.51 0.00 45.73 4.69
201 202 9.372369 AGAAGAGAATTTCTCAGTTAATTACGG 57.628 33.333 24.51 0.00 45.73 4.02
203 204 9.980780 GCAGAAGAGAATTTCTCAGTTAATTAC 57.019 33.333 24.51 7.87 45.73 1.89
204 205 9.950496 AGCAGAAGAGAATTTCTCAGTTAATTA 57.050 29.630 24.51 0.00 45.73 1.40
205 206 8.860780 AGCAGAAGAGAATTTCTCAGTTAATT 57.139 30.769 24.51 11.43 45.73 1.40
206 207 8.860780 AAGCAGAAGAGAATTTCTCAGTTAAT 57.139 30.769 24.51 7.12 45.73 1.40
207 208 9.778741 TTAAGCAGAAGAGAATTTCTCAGTTAA 57.221 29.630 24.51 15.26 45.73 2.01
208 209 9.950496 ATTAAGCAGAAGAGAATTTCTCAGTTA 57.050 29.630 24.51 11.45 45.73 2.24
209 210 8.860780 ATTAAGCAGAAGAGAATTTCTCAGTT 57.139 30.769 24.51 13.31 45.73 3.16
210 211 8.860780 AATTAAGCAGAAGAGAATTTCTCAGT 57.139 30.769 24.51 13.98 45.73 3.41
221 222 8.934825 GCCTCATCTATTAATTAAGCAGAAGAG 58.065 37.037 22.81 22.81 32.10 2.85
222 223 8.432013 TGCCTCATCTATTAATTAAGCAGAAGA 58.568 33.333 13.43 13.18 0.00 2.87
223 224 8.613060 TGCCTCATCTATTAATTAAGCAGAAG 57.387 34.615 13.43 10.54 0.00 2.85
224 225 8.978874 TTGCCTCATCTATTAATTAAGCAGAA 57.021 30.769 13.43 2.08 0.00 3.02
225 226 9.224267 GATTGCCTCATCTATTAATTAAGCAGA 57.776 33.333 12.33 12.33 0.00 4.26
226 227 9.228949 AGATTGCCTCATCTATTAATTAAGCAG 57.771 33.333 3.94 4.02 0.00 4.24
227 228 9.578576 AAGATTGCCTCATCTATTAATTAAGCA 57.421 29.630 3.94 2.63 0.00 3.91
247 248 1.202348 GAAACCCCGAGGCAAAGATTG 59.798 52.381 0.00 0.00 36.11 2.67
248 249 1.075536 AGAAACCCCGAGGCAAAGATT 59.924 47.619 0.00 0.00 36.11 2.40
249 250 0.698818 AGAAACCCCGAGGCAAAGAT 59.301 50.000 0.00 0.00 36.11 2.40
250 251 1.002773 GTAGAAACCCCGAGGCAAAGA 59.997 52.381 0.00 0.00 36.11 2.52
251 252 1.003233 AGTAGAAACCCCGAGGCAAAG 59.997 52.381 0.00 0.00 36.11 2.77
252 253 1.061546 AGTAGAAACCCCGAGGCAAA 58.938 50.000 0.00 0.00 36.11 3.68
253 254 0.323629 CAGTAGAAACCCCGAGGCAA 59.676 55.000 0.00 0.00 36.11 4.52
254 255 0.834687 ACAGTAGAAACCCCGAGGCA 60.835 55.000 0.00 0.00 36.11 4.75
255 256 0.323957 AACAGTAGAAACCCCGAGGC 59.676 55.000 0.00 0.00 36.11 4.70
256 257 1.900486 AGAACAGTAGAAACCCCGAGG 59.100 52.381 0.00 0.00 40.04 4.63
257 258 3.508793 TGTAGAACAGTAGAAACCCCGAG 59.491 47.826 0.00 0.00 0.00 4.63
258 259 3.499338 TGTAGAACAGTAGAAACCCCGA 58.501 45.455 0.00 0.00 0.00 5.14
259 260 3.947910 TGTAGAACAGTAGAAACCCCG 57.052 47.619 0.00 0.00 0.00 5.73
260 261 5.161943 ACATGTAGAACAGTAGAAACCCC 57.838 43.478 0.00 0.00 0.00 4.95
261 262 5.411669 CCAACATGTAGAACAGTAGAAACCC 59.588 44.000 0.00 0.00 0.00 4.11
262 263 5.411669 CCCAACATGTAGAACAGTAGAAACC 59.588 44.000 0.00 0.00 0.00 3.27
263 264 5.411669 CCCCAACATGTAGAACAGTAGAAAC 59.588 44.000 0.00 0.00 0.00 2.78
264 265 5.514136 CCCCCAACATGTAGAACAGTAGAAA 60.514 44.000 0.00 0.00 0.00 2.52
265 266 4.019681 CCCCCAACATGTAGAACAGTAGAA 60.020 45.833 0.00 0.00 0.00 2.10
266 267 3.517901 CCCCCAACATGTAGAACAGTAGA 59.482 47.826 0.00 0.00 0.00 2.59
267 268 3.873910 CCCCCAACATGTAGAACAGTAG 58.126 50.000 0.00 0.00 0.00 2.57
268 269 2.026636 GCCCCCAACATGTAGAACAGTA 60.027 50.000 0.00 0.00 0.00 2.74
269 270 1.271926 GCCCCCAACATGTAGAACAGT 60.272 52.381 0.00 0.00 0.00 3.55
270 271 1.271871 TGCCCCCAACATGTAGAACAG 60.272 52.381 0.00 0.00 0.00 3.16
271 272 0.774276 TGCCCCCAACATGTAGAACA 59.226 50.000 0.00 0.00 0.00 3.18
272 273 1.004277 TCTGCCCCCAACATGTAGAAC 59.996 52.381 0.00 0.00 0.00 3.01
273 274 1.004277 GTCTGCCCCCAACATGTAGAA 59.996 52.381 0.00 0.00 0.00 2.10
274 275 0.618458 GTCTGCCCCCAACATGTAGA 59.382 55.000 0.00 0.00 0.00 2.59
275 276 0.394352 GGTCTGCCCCCAACATGTAG 60.394 60.000 0.00 0.00 0.00 2.74
276 277 1.136961 TGGTCTGCCCCCAACATGTA 61.137 55.000 0.00 0.00 0.00 2.29
277 278 2.440599 GGTCTGCCCCCAACATGT 59.559 61.111 0.00 0.00 0.00 3.21
278 279 1.978617 GTGGTCTGCCCCCAACATG 60.979 63.158 0.00 0.00 32.72 3.21
279 280 1.729267 AAGTGGTCTGCCCCCAACAT 61.729 55.000 0.00 0.00 32.72 2.71
280 281 2.351924 GAAGTGGTCTGCCCCCAACA 62.352 60.000 0.00 0.00 32.72 3.33
281 282 1.603739 GAAGTGGTCTGCCCCCAAC 60.604 63.158 0.00 0.00 32.72 3.77
282 283 2.843545 GAAGTGGTCTGCCCCCAA 59.156 61.111 0.00 0.00 32.72 4.12
283 284 3.636231 CGAAGTGGTCTGCCCCCA 61.636 66.667 0.00 0.00 0.00 4.96
284 285 2.288025 TACGAAGTGGTCTGCCCCC 61.288 63.158 0.00 0.00 45.73 5.40
285 286 1.079336 GTACGAAGTGGTCTGCCCC 60.079 63.158 0.00 0.00 45.73 5.80
286 287 0.389948 CTGTACGAAGTGGTCTGCCC 60.390 60.000 0.00 0.00 45.73 5.36
287 288 0.317479 ACTGTACGAAGTGGTCTGCC 59.683 55.000 0.00 0.00 45.73 4.85
288 289 3.505464 ATACTGTACGAAGTGGTCTGC 57.495 47.619 0.00 0.00 45.73 4.26
289 290 4.335874 AGCTATACTGTACGAAGTGGTCTG 59.664 45.833 0.00 0.00 45.73 3.51
290 291 4.525024 AGCTATACTGTACGAAGTGGTCT 58.475 43.478 0.00 0.00 45.73 3.85
291 292 4.897025 AGCTATACTGTACGAAGTGGTC 57.103 45.455 0.00 0.00 45.73 4.02
292 293 5.241064 CCATAGCTATACTGTACGAAGTGGT 59.759 44.000 5.77 0.00 45.73 4.16
293 294 5.335740 CCCATAGCTATACTGTACGAAGTGG 60.336 48.000 5.77 0.00 45.73 4.00
294 295 5.241064 ACCCATAGCTATACTGTACGAAGTG 59.759 44.000 5.77 0.00 45.73 3.16
295 296 7.691293 ACTACCCATAGCTATACTGTACGAAGT 60.691 40.741 5.77 2.21 36.76 3.01
296 297 5.961396 ACCCATAGCTATACTGTACGAAG 57.039 43.478 5.77 0.00 0.00 3.79
297 298 6.429078 CACTACCCATAGCTATACTGTACGAA 59.571 42.308 5.77 0.00 30.75 3.85
298 299 5.936372 CACTACCCATAGCTATACTGTACGA 59.064 44.000 5.77 0.00 30.75 3.43
386 389 3.414700 GAAGTCAGCGGGTGCACG 61.415 66.667 11.45 0.73 46.23 5.34
437 443 4.527157 GGGTCGCGAGTCGTACGG 62.527 72.222 10.24 0.00 39.67 4.02
439 445 2.099831 CTGGGTCGCGAGTCGTAC 59.900 66.667 10.24 12.45 39.67 3.67
482 488 0.327259 AGCTGAGCCAATGAGCAAGA 59.673 50.000 0.00 0.00 35.03 3.02
492 530 1.227943 AGCGTTTTGAGCTGAGCCA 60.228 52.632 0.00 0.00 44.22 4.75
508 547 2.169832 TTCTATCTAATGGCGCCAGC 57.830 50.000 35.36 5.00 44.18 4.85
511 550 2.673368 CGGATTTCTATCTAATGGCGCC 59.327 50.000 22.73 22.73 0.00 6.53
534 579 2.551032 GGGAAAAACCGTGTCGAATCTT 59.449 45.455 0.00 0.00 40.11 2.40
570 616 9.843334 ACTCAATTTTGTACTAACGTTTCAAAA 57.157 25.926 22.28 22.28 38.61 2.44
571 617 9.493206 GACTCAATTTTGTACTAACGTTTCAAA 57.507 29.630 5.91 10.69 0.00 2.69
572 618 8.666573 TGACTCAATTTTGTACTAACGTTTCAA 58.333 29.630 5.91 5.05 0.00 2.69
573 619 8.199176 TGACTCAATTTTGTACTAACGTTTCA 57.801 30.769 5.91 0.00 0.00 2.69
574 620 9.314501 GATGACTCAATTTTGTACTAACGTTTC 57.685 33.333 5.91 0.00 0.00 2.78
575 621 9.052759 AGATGACTCAATTTTGTACTAACGTTT 57.947 29.630 5.91 0.00 0.00 3.60
576 622 8.603242 AGATGACTCAATTTTGTACTAACGTT 57.397 30.769 5.88 5.88 0.00 3.99
577 623 9.871238 ATAGATGACTCAATTTTGTACTAACGT 57.129 29.630 0.00 0.00 0.00 3.99
589 635 9.831737 CTTCGTTTCAAAATAGATGACTCAATT 57.168 29.630 0.00 0.00 0.00 2.32
590 636 8.454106 CCTTCGTTTCAAAATAGATGACTCAAT 58.546 33.333 0.00 0.00 0.00 2.57
591 637 7.094805 CCCTTCGTTTCAAAATAGATGACTCAA 60.095 37.037 0.00 0.00 0.00 3.02
592 638 6.371548 CCCTTCGTTTCAAAATAGATGACTCA 59.628 38.462 0.00 0.00 0.00 3.41
593 639 6.594159 TCCCTTCGTTTCAAAATAGATGACTC 59.406 38.462 0.00 0.00 0.00 3.36
594 640 6.472887 TCCCTTCGTTTCAAAATAGATGACT 58.527 36.000 0.00 0.00 0.00 3.41
595 641 6.371825 ACTCCCTTCGTTTCAAAATAGATGAC 59.628 38.462 0.00 0.00 0.00 3.06
596 642 6.472887 ACTCCCTTCGTTTCAAAATAGATGA 58.527 36.000 0.00 0.00 0.00 2.92
597 643 6.743575 ACTCCCTTCGTTTCAAAATAGATG 57.256 37.500 0.00 0.00 0.00 2.90
598 644 6.534079 CGTACTCCCTTCGTTTCAAAATAGAT 59.466 38.462 0.00 0.00 0.00 1.98
599 645 5.865552 CGTACTCCCTTCGTTTCAAAATAGA 59.134 40.000 0.00 0.00 0.00 1.98
600 646 5.865552 TCGTACTCCCTTCGTTTCAAAATAG 59.134 40.000 0.00 0.00 0.00 1.73
601 647 5.782047 TCGTACTCCCTTCGTTTCAAAATA 58.218 37.500 0.00 0.00 0.00 1.40
602 648 4.634199 TCGTACTCCCTTCGTTTCAAAAT 58.366 39.130 0.00 0.00 0.00 1.82
603 649 4.053295 CTCGTACTCCCTTCGTTTCAAAA 58.947 43.478 0.00 0.00 0.00 2.44
604 650 3.318839 TCTCGTACTCCCTTCGTTTCAAA 59.681 43.478 0.00 0.00 0.00 2.69
605 651 2.886523 TCTCGTACTCCCTTCGTTTCAA 59.113 45.455 0.00 0.00 0.00 2.69
606 652 2.507484 TCTCGTACTCCCTTCGTTTCA 58.493 47.619 0.00 0.00 0.00 2.69
607 653 3.565905 TTCTCGTACTCCCTTCGTTTC 57.434 47.619 0.00 0.00 0.00 2.78
608 654 4.532314 AATTCTCGTACTCCCTTCGTTT 57.468 40.909 0.00 0.00 0.00 3.60
609 655 4.532314 AAATTCTCGTACTCCCTTCGTT 57.468 40.909 0.00 0.00 0.00 3.85
610 656 4.532314 AAAATTCTCGTACTCCCTTCGT 57.468 40.909 0.00 0.00 0.00 3.85
611 657 4.927425 TCAAAAATTCTCGTACTCCCTTCG 59.073 41.667 0.00 0.00 0.00 3.79
612 658 5.163982 CGTCAAAAATTCTCGTACTCCCTTC 60.164 44.000 0.00 0.00 0.00 3.46
613 659 4.689345 CGTCAAAAATTCTCGTACTCCCTT 59.311 41.667 0.00 0.00 0.00 3.95
614 660 4.243270 CGTCAAAAATTCTCGTACTCCCT 58.757 43.478 0.00 0.00 0.00 4.20
615 661 3.181523 GCGTCAAAAATTCTCGTACTCCC 60.182 47.826 0.00 0.00 0.00 4.30
616 662 3.430895 TGCGTCAAAAATTCTCGTACTCC 59.569 43.478 0.00 0.00 0.00 3.85
617 663 4.434330 CCTGCGTCAAAAATTCTCGTACTC 60.434 45.833 0.00 0.00 0.00 2.59
618 664 3.432252 CCTGCGTCAAAAATTCTCGTACT 59.568 43.478 0.00 0.00 0.00 2.73
619 665 3.424433 CCCTGCGTCAAAAATTCTCGTAC 60.424 47.826 0.00 0.00 0.00 3.67
620 666 2.739913 CCCTGCGTCAAAAATTCTCGTA 59.260 45.455 0.00 0.00 0.00 3.43
627 673 2.097466 CGCTTATCCCTGCGTCAAAAAT 59.903 45.455 0.00 0.00 46.09 1.82
629 675 1.083489 CGCTTATCCCTGCGTCAAAA 58.917 50.000 0.00 0.00 46.09 2.44
638 684 1.075226 TCTGCCTCCGCTTATCCCT 60.075 57.895 0.00 0.00 35.36 4.20
642 688 1.745264 GCTCTCTGCCTCCGCTTAT 59.255 57.895 0.00 0.00 35.36 1.73
648 694 0.036858 AAACTTCGCTCTCTGCCTCC 60.037 55.000 0.00 0.00 38.78 4.30
658 704 0.468226 TGACCAGACCAAACTTCGCT 59.532 50.000 0.00 0.00 0.00 4.93
1675 1827 0.973632 TCTTTAGCCTCAGCGGACAA 59.026 50.000 0.00 0.00 46.67 3.18
1689 1841 4.519540 GCATTTGGCCAAGAAGTCTTTA 57.480 40.909 19.48 0.00 36.11 1.85
1753 1905 1.966451 CCAAGAACGGGTGCTCCAC 60.966 63.158 7.20 0.00 34.36 4.02
2091 2294 0.735978 CAGTAATGTCGACAGCGCCA 60.736 55.000 24.41 3.93 37.46 5.69
2098 2301 1.983605 CACGTCCACAGTAATGTCGAC 59.016 52.381 9.11 9.11 0.00 4.20
2155 2361 4.449131 ACTGCTGAATCATCATCATCGTT 58.551 39.130 0.00 0.00 31.73 3.85
2170 2382 1.186200 CAGTGCCCTACTACTGCTGA 58.814 55.000 0.00 0.00 37.60 4.26
2171 2383 0.898320 ACAGTGCCCTACTACTGCTG 59.102 55.000 0.00 0.00 46.27 4.41
2172 2384 2.379972 CTACAGTGCCCTACTACTGCT 58.620 52.381 0.00 0.00 46.27 4.24
2173 2385 1.409427 CCTACAGTGCCCTACTACTGC 59.591 57.143 0.00 0.00 46.27 4.40
2212 2433 5.105310 ACGACACTAATTGGTGAGAAGCTAT 60.105 40.000 26.56 3.16 40.13 2.97
2235 2456 8.649841 TCGCTACATAACAGTAACAATTTACAC 58.350 33.333 0.00 0.00 40.25 2.90
2401 2650 0.357894 CGAACGACGAGTTAGTTGCG 59.642 55.000 0.00 0.00 44.35 4.85
2411 2660 0.935831 AAATGCACGACGAACGACGA 60.936 50.000 22.29 4.17 45.77 4.20
2417 2666 1.999735 GATCCAGAAATGCACGACGAA 59.000 47.619 0.00 0.00 0.00 3.85
2428 2981 1.573829 GCCAACACGCGATCCAGAAA 61.574 55.000 15.93 0.00 0.00 2.52
2444 2997 0.601576 AGTACGTGTCAAATGCGCCA 60.602 50.000 4.18 0.00 0.00 5.69
2481 3034 7.809546 TCAGATATCGTCAGTCTAGAAACAT 57.190 36.000 0.00 0.00 0.00 2.71
2492 3045 4.278170 AGAGCCTCTTTCAGATATCGTCAG 59.722 45.833 0.00 0.00 0.00 3.51
2499 3052 7.921214 CGTATAAACAAGAGCCTCTTTCAGATA 59.079 37.037 3.68 0.00 33.78 1.98
2501 3054 6.100004 CGTATAAACAAGAGCCTCTTTCAGA 58.900 40.000 3.68 0.00 33.78 3.27
2505 3058 6.465084 AGAACGTATAAACAAGAGCCTCTTT 58.535 36.000 3.68 0.00 33.78 2.52
2506 3059 6.038997 AGAACGTATAAACAAGAGCCTCTT 57.961 37.500 0.00 0.00 37.14 2.85
2516 3069 8.296713 ACGTAGTAAAAGGAGAACGTATAAACA 58.703 33.333 0.00 0.00 41.94 2.83
2537 3090 2.012673 ACGCAGGGAGTACTTACGTAG 58.987 52.381 0.00 0.00 31.27 3.51
2539 3092 0.807496 GACGCAGGGAGTACTTACGT 59.193 55.000 0.00 3.08 34.50 3.57
2542 3095 2.502142 TGAGACGCAGGGAGTACTTA 57.498 50.000 0.00 0.00 0.00 2.24
2544 3097 1.629043 TTTGAGACGCAGGGAGTACT 58.371 50.000 0.00 0.00 0.00 2.73
2614 4270 3.070429 ACGCCGGACTAAGTATAAACG 57.930 47.619 5.05 0.00 0.00 3.60
2619 4275 2.810852 GCTACTACGCCGGACTAAGTAT 59.189 50.000 5.05 0.00 0.00 2.12
2630 4286 2.088950 TTGACCAAAGCTACTACGCC 57.911 50.000 0.00 0.00 0.00 5.68
2631 4287 4.153475 TGATTTTGACCAAAGCTACTACGC 59.847 41.667 0.00 0.00 31.55 4.42
2736 4392 3.090532 AGGCCGGGGGTCATTCTC 61.091 66.667 2.18 0.00 0.00 2.87
2750 4406 1.262683 GCATCGTCTAAATGCAGAGGC 59.737 52.381 3.35 0.00 46.93 4.70
2758 4414 2.555199 GACTGCCTGCATCGTCTAAAT 58.445 47.619 4.74 0.00 0.00 1.40
2765 4421 0.453282 CAAAACGACTGCCTGCATCG 60.453 55.000 16.68 16.68 41.60 3.84
2772 4428 8.372521 CAATGAATAATTAACAAAACGACTGCC 58.627 33.333 0.00 0.00 0.00 4.85
2851 4508 3.130516 CAGGTGAATAGGAGTAGCGACAA 59.869 47.826 0.00 0.00 0.00 3.18
2853 4510 2.950309 TCAGGTGAATAGGAGTAGCGAC 59.050 50.000 0.00 0.00 0.00 5.19
2870 4527 2.868583 CAATCTACACGGCTTCATCAGG 59.131 50.000 0.00 0.00 0.00 3.86
2871 4528 3.308053 CACAATCTACACGGCTTCATCAG 59.692 47.826 0.00 0.00 0.00 2.90
2881 4538 0.992072 CGGCTCACACAATCTACACG 59.008 55.000 0.00 0.00 0.00 4.49
2907 4564 5.991861 TGTTAGGTTTTGGTGTGACTTCTA 58.008 37.500 0.00 0.00 0.00 2.10
2911 4568 5.048846 AGATGTTAGGTTTTGGTGTGACT 57.951 39.130 0.00 0.00 0.00 3.41
2919 4576 4.698304 TCCGGCTTTAGATGTTAGGTTTTG 59.302 41.667 0.00 0.00 0.00 2.44
2923 4580 2.434702 CCTCCGGCTTTAGATGTTAGGT 59.565 50.000 0.00 0.00 0.00 3.08
2956 4613 1.875576 GCCTCAGACCTGATATTGCGG 60.876 57.143 0.00 0.00 39.13 5.69
2959 4616 3.201290 GTGTGCCTCAGACCTGATATTG 58.799 50.000 0.00 0.00 39.13 1.90
2964 4621 1.748403 GTGTGTGCCTCAGACCTGA 59.252 57.895 0.00 0.00 34.75 3.86
3037 4694 0.827089 TGGAACGGTGGAAGACGGTA 60.827 55.000 0.00 0.00 37.14 4.02
3049 4706 3.126831 GTCTGCTATGAAGATGGAACGG 58.873 50.000 0.00 0.00 0.00 4.44
3052 4709 4.467438 TCAGTGTCTGCTATGAAGATGGAA 59.533 41.667 0.00 0.00 0.00 3.53
3063 4720 1.177401 AGATGCGTCAGTGTCTGCTA 58.823 50.000 8.99 0.00 0.00 3.49
3099 4756 2.505557 CAACGGGGTAGCGTCGAC 60.506 66.667 5.18 5.18 0.00 4.20
3100 4757 2.985282 ACAACGGGGTAGCGTCGA 60.985 61.111 12.09 0.00 0.00 4.20
3101 4758 2.807895 CACAACGGGGTAGCGTCG 60.808 66.667 5.05 5.05 0.00 5.12
3102 4759 3.116531 GCACAACGGGGTAGCGTC 61.117 66.667 0.00 0.00 0.00 5.19
3103 4760 4.692475 GGCACAACGGGGTAGCGT 62.692 66.667 0.00 0.00 0.00 5.07
3104 4761 4.690719 TGGCACAACGGGGTAGCG 62.691 66.667 0.00 0.00 31.92 4.26
3105 4762 3.053896 GTGGCACAACGGGGTAGC 61.054 66.667 13.86 0.00 44.16 3.58
3106 4763 2.740826 CGTGGCACAACGGGGTAG 60.741 66.667 19.09 0.00 44.16 3.18
3107 4764 4.992511 GCGTGGCACAACGGGGTA 62.993 66.667 19.09 0.00 44.16 3.69
3136 4855 2.051614 TATCGCATCGACGACGGC 60.052 61.111 7.55 12.06 46.28 5.68
3147 4866 2.421314 CGGTGGCCATCTATCGCA 59.579 61.111 15.59 0.00 0.00 5.10
3149 4868 1.373497 GAGCGGTGGCCATCTATCG 60.373 63.158 15.59 12.04 41.24 2.92
3151 4870 1.766059 TGGAGCGGTGGCCATCTAT 60.766 57.895 15.59 1.21 41.24 1.98
3158 4877 4.021925 AAGGAGTGGAGCGGTGGC 62.022 66.667 0.00 0.00 40.37 5.01
3159 4878 2.046892 CAAGGAGTGGAGCGGTGG 60.047 66.667 0.00 0.00 0.00 4.61
3176 4895 0.108138 AGTTGCTACATGGAGGACGC 60.108 55.000 7.16 0.00 0.00 5.19
3221 4940 2.270527 GCTCTTGGTGCCCCTCTC 59.729 66.667 0.00 0.00 0.00 3.20
3240 4959 0.318529 CTCAGATCTGACGATGCCGG 60.319 60.000 21.67 5.67 40.78 6.13
3241 4960 0.665298 TCTCAGATCTGACGATGCCG 59.335 55.000 21.67 10.16 42.50 5.69
3243 4962 3.366883 GGGTATCTCAGATCTGACGATGC 60.367 52.174 29.04 27.73 35.46 3.91
3251 4970 3.563261 CCAGATCCGGGTATCTCAGATCT 60.563 52.174 0.00 0.00 43.37 2.75
3258 4977 4.977810 CCCCAGATCCGGGTATCT 57.022 61.111 13.22 0.00 45.80 1.98
3283 5002 3.826754 CCCACTCGCGCTGCTCTA 61.827 66.667 5.56 0.00 0.00 2.43
3294 5013 2.014068 GCAGCCACATTCTACCCACTC 61.014 57.143 0.00 0.00 0.00 3.51
3330 5049 2.202133 GCGCGCCGTTACTTTGTC 60.202 61.111 23.24 0.00 0.00 3.18
3386 5105 2.909965 GGCTGCCGGTGAAAACCA 60.910 61.111 1.35 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.