Multiple sequence alignment - TraesCS1D01G370400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G370400 chr1D 100.000 5819 0 0 1 5819 449206420 449212238 0.000000e+00 10746.0
1 TraesCS1D01G370400 chr1D 91.050 581 26 14 5242 5817 443784275 443784834 0.000000e+00 761.0
2 TraesCS1D01G370400 chr1D 89.897 584 32 14 5242 5819 427861774 427862336 0.000000e+00 726.0
3 TraesCS1D01G370400 chr1D 99.548 221 1 0 1 221 145522142 145521922 2.530000e-108 403.0
4 TraesCS1D01G370400 chr1A 94.535 4172 203 13 805 4968 544427833 544431987 0.000000e+00 6418.0
5 TraesCS1D01G370400 chr1A 79.281 584 72 28 5242 5819 587945116 587945656 4.290000e-96 363.0
6 TraesCS1D01G370400 chr1A 93.210 162 10 1 252 412 544410067 544410228 2.710000e-58 237.0
7 TraesCS1D01G370400 chr1A 88.360 189 10 5 5054 5242 544432211 544432387 3.530000e-52 217.0
8 TraesCS1D01G370400 chr1A 95.960 99 4 0 483 581 544427603 544427701 1.680000e-35 161.0
9 TraesCS1D01G370400 chr1B 94.679 4153 189 8 702 4848 614715013 614719139 0.000000e+00 6416.0
10 TraesCS1D01G370400 chr1B 94.211 190 10 1 5054 5242 614719499 614719688 7.380000e-74 289.0
11 TraesCS1D01G370400 chr1B 89.340 197 10 6 244 436 614690408 614690597 2.710000e-58 237.0
12 TraesCS1D01G370400 chr1B 86.139 101 8 5 4872 4968 614719291 614719389 2.870000e-18 104.0
13 TraesCS1D01G370400 chr2D 92.241 580 23 11 5242 5819 590023561 590023002 0.000000e+00 802.0
14 TraesCS1D01G370400 chr2D 99.550 222 1 0 1 222 48441395 48441174 7.020000e-109 405.0
15 TraesCS1D01G370400 chr2D 98.667 225 2 1 1 225 475470913 475470690 1.170000e-106 398.0
16 TraesCS1D01G370400 chr5A 89.184 564 41 7 5242 5805 14492572 14493115 0.000000e+00 686.0
17 TraesCS1D01G370400 chr5A 89.184 564 41 7 5242 5805 14498169 14498712 0.000000e+00 686.0
18 TraesCS1D01G370400 chr5A 89.184 564 40 8 5242 5805 14503767 14504309 0.000000e+00 684.0
19 TraesCS1D01G370400 chr5A 89.184 564 40 9 5242 5805 14514907 14515449 0.000000e+00 684.0
20 TraesCS1D01G370400 chr5A 89.007 564 42 8 5242 5805 14520470 14521013 0.000000e+00 680.0
21 TraesCS1D01G370400 chr5A 88.830 564 43 7 5242 5805 14509313 14509856 0.000000e+00 675.0
22 TraesCS1D01G370400 chr5A 87.565 579 46 13 5242 5819 600971429 600970876 0.000000e+00 647.0
23 TraesCS1D01G370400 chr3D 86.621 583 33 11 5242 5819 508088219 508088761 2.320000e-168 603.0
24 TraesCS1D01G370400 chr5D 99.548 221 1 0 1 221 352446670 352446890 2.530000e-108 403.0
25 TraesCS1D01G370400 chr5D 99.103 223 2 0 1 223 55236128 55236350 9.080000e-108 401.0
26 TraesCS1D01G370400 chr5D 97.817 229 5 0 1 229 160865415 160865643 4.230000e-106 396.0
27 TraesCS1D01G370400 chr5D 97.817 229 4 1 1 229 479344148 479344375 1.520000e-105 394.0
28 TraesCS1D01G370400 chr5D 96.234 239 6 3 1 238 260417383 260417147 7.070000e-104 388.0
29 TraesCS1D01G370400 chr4D 96.653 239 6 2 1 239 51449045 51448809 4.230000e-106 396.0
30 TraesCS1D01G370400 chr4D 100.000 28 0 0 5436 5463 398040671 398040698 1.100000e-02 52.8
31 TraesCS1D01G370400 chr7B 79.557 587 67 36 5240 5819 702467196 702466656 2.560000e-98 370.0
32 TraesCS1D01G370400 chr3A 78.157 586 76 33 5242 5819 22392304 22392845 5.620000e-85 326.0
33 TraesCS1D01G370400 chr3A 82.258 372 50 11 5454 5819 19185909 19185548 2.040000e-79 307.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G370400 chr1D 449206420 449212238 5818 False 10746.000000 10746 100.000000 1 5819 1 chr1D.!!$F3 5818
1 TraesCS1D01G370400 chr1D 443784275 443784834 559 False 761.000000 761 91.050000 5242 5817 1 chr1D.!!$F2 575
2 TraesCS1D01G370400 chr1D 427861774 427862336 562 False 726.000000 726 89.897000 5242 5819 1 chr1D.!!$F1 577
3 TraesCS1D01G370400 chr1A 544427603 544432387 4784 False 2265.333333 6418 92.951667 483 5242 3 chr1A.!!$F3 4759
4 TraesCS1D01G370400 chr1A 587945116 587945656 540 False 363.000000 363 79.281000 5242 5819 1 chr1A.!!$F2 577
5 TraesCS1D01G370400 chr1B 614715013 614719688 4675 False 2269.666667 6416 91.676333 702 5242 3 chr1B.!!$F2 4540
6 TraesCS1D01G370400 chr2D 590023002 590023561 559 True 802.000000 802 92.241000 5242 5819 1 chr2D.!!$R3 577
7 TraesCS1D01G370400 chr5A 14492572 14493115 543 False 686.000000 686 89.184000 5242 5805 1 chr5A.!!$F1 563
8 TraesCS1D01G370400 chr5A 14498169 14498712 543 False 686.000000 686 89.184000 5242 5805 1 chr5A.!!$F2 563
9 TraesCS1D01G370400 chr5A 14503767 14504309 542 False 684.000000 684 89.184000 5242 5805 1 chr5A.!!$F3 563
10 TraesCS1D01G370400 chr5A 14514907 14515449 542 False 684.000000 684 89.184000 5242 5805 1 chr5A.!!$F5 563
11 TraesCS1D01G370400 chr5A 14520470 14521013 543 False 680.000000 680 89.007000 5242 5805 1 chr5A.!!$F6 563
12 TraesCS1D01G370400 chr5A 14509313 14509856 543 False 675.000000 675 88.830000 5242 5805 1 chr5A.!!$F4 563
13 TraesCS1D01G370400 chr5A 600970876 600971429 553 True 647.000000 647 87.565000 5242 5819 1 chr5A.!!$R1 577
14 TraesCS1D01G370400 chr3D 508088219 508088761 542 False 603.000000 603 86.621000 5242 5819 1 chr3D.!!$F1 577
15 TraesCS1D01G370400 chr7B 702466656 702467196 540 True 370.000000 370 79.557000 5240 5819 1 chr7B.!!$R1 579
16 TraesCS1D01G370400 chr3A 22392304 22392845 541 False 326.000000 326 78.157000 5242 5819 1 chr3A.!!$F1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
269 270 0.035439 CAGTATGCCCCAAACTCGGT 60.035 55.0 0.00 0.0 0.00 4.69 F
274 275 0.035739 TGCCCCAAACTCGGTACTTC 59.964 55.0 0.00 0.0 0.00 3.01 F
2199 2213 0.112995 TTGGGGCTGCAGATGAAACT 59.887 50.0 20.43 0.0 0.00 2.66 F
2491 2505 0.463654 ACGCCTCAAGCAGTGTTTCA 60.464 50.0 0.00 0.0 44.04 2.69 F
3461 3478 0.238553 GGAAGCAACGAGGTTTCAGC 59.761 55.0 0.00 0.0 38.24 4.26 F
4165 4182 0.250234 CGGCTTCAAGGATCTCACCA 59.750 55.0 0.00 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2229 2243 0.037232 CCTCTTCAAGGTCGTCCCAC 60.037 60.000 0.00 0.00 40.67 4.61 R
2241 2255 1.290431 AGCTCCTCCTCATCCTCTTCA 59.710 52.381 0.00 0.00 0.00 3.02 R
3420 3434 0.749454 CCATGGAACTGCTAGCCCAC 60.749 60.000 13.29 1.02 0.00 4.61 R
3786 3803 0.878961 GTCTTGTCGAGTTGCCGGTT 60.879 55.000 1.90 0.00 0.00 4.44 R
4703 4720 0.035630 AATCAGCTCTGGACTGCACC 60.036 55.000 0.00 0.00 35.04 5.01 R
5454 5748 0.036388 GGAATGTCCGTTCAGGCTCA 60.036 55.000 1.99 0.00 40.77 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.723348 GTTGAACGCGGAGGCACC 61.723 66.667 12.47 0.00 39.92 5.01
26 27 3.562635 GGAGGCACCGTTCTTTCG 58.437 61.111 0.00 0.00 0.00 3.46
35 36 2.074547 CCGTTCTTTCGGTGCTTAGA 57.925 50.000 0.00 0.00 44.77 2.10
36 37 2.618053 CCGTTCTTTCGGTGCTTAGAT 58.382 47.619 0.00 0.00 44.77 1.98
37 38 2.603560 CCGTTCTTTCGGTGCTTAGATC 59.396 50.000 0.00 0.00 44.77 2.75
38 39 2.279136 CGTTCTTTCGGTGCTTAGATCG 59.721 50.000 0.00 0.00 0.00 3.69
39 40 2.579207 TCTTTCGGTGCTTAGATCGG 57.421 50.000 0.00 0.00 0.00 4.18
40 41 2.097036 TCTTTCGGTGCTTAGATCGGA 58.903 47.619 0.00 0.00 0.00 4.55
41 42 2.494471 TCTTTCGGTGCTTAGATCGGAA 59.506 45.455 0.00 0.00 0.00 4.30
42 43 3.132289 TCTTTCGGTGCTTAGATCGGAAT 59.868 43.478 0.00 0.00 0.00 3.01
43 44 2.795175 TCGGTGCTTAGATCGGAATC 57.205 50.000 0.00 0.00 0.00 2.52
44 45 2.028876 TCGGTGCTTAGATCGGAATCA 58.971 47.619 0.00 0.00 34.07 2.57
45 46 2.429250 TCGGTGCTTAGATCGGAATCAA 59.571 45.455 0.00 0.00 34.07 2.57
46 47 2.540101 CGGTGCTTAGATCGGAATCAAC 59.460 50.000 0.00 0.00 34.07 3.18
47 48 2.872858 GGTGCTTAGATCGGAATCAACC 59.127 50.000 0.00 0.00 34.07 3.77
54 55 4.420143 CGGAATCAACCGCGATCT 57.580 55.556 8.23 0.00 46.20 2.75
55 56 1.927210 CGGAATCAACCGCGATCTG 59.073 57.895 8.23 0.97 46.20 2.90
56 57 0.527600 CGGAATCAACCGCGATCTGA 60.528 55.000 8.23 7.51 46.20 3.27
57 58 1.651987 GGAATCAACCGCGATCTGAA 58.348 50.000 8.23 0.00 0.00 3.02
58 59 2.213499 GGAATCAACCGCGATCTGAAT 58.787 47.619 8.23 0.00 0.00 2.57
59 60 2.221981 GGAATCAACCGCGATCTGAATC 59.778 50.000 8.23 9.47 0.00 2.52
72 73 5.284428 GATCTGAATCGCTACGAGTATGA 57.716 43.478 0.00 0.00 39.91 2.15
73 74 4.469625 TCTGAATCGCTACGAGTATGAC 57.530 45.455 0.00 0.00 39.91 3.06
74 75 4.127907 TCTGAATCGCTACGAGTATGACT 58.872 43.478 0.00 0.00 39.91 3.41
75 76 4.211584 TCTGAATCGCTACGAGTATGACTC 59.788 45.833 0.00 0.00 39.91 3.36
76 77 3.250280 TGAATCGCTACGAGTATGACTCC 59.750 47.826 1.13 0.00 42.12 3.85
77 78 1.590932 TCGCTACGAGTATGACTCCC 58.409 55.000 1.13 0.00 42.12 4.30
78 79 1.140452 TCGCTACGAGTATGACTCCCT 59.860 52.381 1.13 0.00 42.12 4.20
79 80 1.532007 CGCTACGAGTATGACTCCCTC 59.468 57.143 1.13 0.00 42.12 4.30
80 81 2.573369 GCTACGAGTATGACTCCCTCA 58.427 52.381 1.13 0.00 42.12 3.86
81 82 3.150767 GCTACGAGTATGACTCCCTCAT 58.849 50.000 1.13 0.00 42.12 2.90
82 83 3.189702 GCTACGAGTATGACTCCCTCATC 59.810 52.174 1.13 0.00 42.12 2.92
83 84 2.588620 ACGAGTATGACTCCCTCATCC 58.411 52.381 1.13 0.00 42.12 3.51
84 85 1.537638 CGAGTATGACTCCCTCATCCG 59.462 57.143 1.13 0.00 42.12 4.18
85 86 1.271102 GAGTATGACTCCCTCATCCGC 59.729 57.143 0.00 0.00 40.38 5.54
86 87 0.039074 GTATGACTCCCTCATCCGCG 60.039 60.000 0.00 0.00 40.38 6.46
87 88 0.467474 TATGACTCCCTCATCCGCGT 60.467 55.000 4.92 0.00 40.38 6.01
88 89 1.330655 ATGACTCCCTCATCCGCGTT 61.331 55.000 4.92 0.00 34.07 4.84
89 90 1.227002 GACTCCCTCATCCGCGTTC 60.227 63.158 4.92 0.00 0.00 3.95
90 91 1.668101 GACTCCCTCATCCGCGTTCT 61.668 60.000 4.92 0.00 0.00 3.01
91 92 1.258445 ACTCCCTCATCCGCGTTCTT 61.258 55.000 4.92 0.00 0.00 2.52
92 93 0.807667 CTCCCTCATCCGCGTTCTTG 60.808 60.000 4.92 0.00 0.00 3.02
93 94 2.464459 CCCTCATCCGCGTTCTTGC 61.464 63.158 4.92 0.00 0.00 4.01
94 95 1.741401 CCTCATCCGCGTTCTTGCA 60.741 57.895 4.92 0.00 34.15 4.08
95 96 1.298157 CCTCATCCGCGTTCTTGCAA 61.298 55.000 4.92 0.00 34.15 4.08
96 97 0.179215 CTCATCCGCGTTCTTGCAAC 60.179 55.000 4.92 0.00 34.15 4.17
97 98 1.509787 CATCCGCGTTCTTGCAACG 60.510 57.895 4.92 5.06 45.56 4.10
102 103 4.515107 CGTTCTTGCAACGCTTCC 57.485 55.556 0.00 0.00 36.82 3.46
103 104 1.438710 CGTTCTTGCAACGCTTCCG 60.439 57.895 0.00 0.00 36.82 4.30
104 105 1.725973 GTTCTTGCAACGCTTCCGC 60.726 57.895 0.00 0.00 38.22 5.54
105 106 2.183504 TTCTTGCAACGCTTCCGCA 61.184 52.632 0.00 0.00 38.22 5.69
106 107 1.514678 TTCTTGCAACGCTTCCGCAT 61.515 50.000 0.00 0.00 38.22 4.73
107 108 1.512734 CTTGCAACGCTTCCGCATC 60.513 57.895 0.00 0.00 38.22 3.91
108 109 3.307505 TTGCAACGCTTCCGCATCG 62.308 57.895 0.00 0.00 38.22 3.84
121 122 2.522060 GCATCGCGATCTACAAGGG 58.478 57.895 20.85 6.53 0.00 3.95
122 123 0.249489 GCATCGCGATCTACAAGGGT 60.249 55.000 20.85 0.00 0.00 4.34
123 124 1.000607 GCATCGCGATCTACAAGGGTA 60.001 52.381 20.85 0.00 0.00 3.69
124 125 2.352814 GCATCGCGATCTACAAGGGTAT 60.353 50.000 20.85 0.00 0.00 2.73
125 126 3.245797 CATCGCGATCTACAAGGGTATG 58.754 50.000 20.85 0.12 0.00 2.39
126 127 2.304092 TCGCGATCTACAAGGGTATGT 58.696 47.619 3.71 0.00 37.32 2.29
127 128 3.479489 TCGCGATCTACAAGGGTATGTA 58.521 45.455 3.71 0.00 34.75 2.29
136 137 4.408182 ACAAGGGTATGTAGATGCACTC 57.592 45.455 0.00 0.00 25.83 3.51
137 138 3.134804 ACAAGGGTATGTAGATGCACTCC 59.865 47.826 0.00 0.00 25.83 3.85
138 139 2.330216 AGGGTATGTAGATGCACTCCC 58.670 52.381 0.00 0.00 35.94 4.30
139 140 1.348036 GGGTATGTAGATGCACTCCCC 59.652 57.143 0.00 0.00 32.31 4.81
140 141 2.330216 GGTATGTAGATGCACTCCCCT 58.670 52.381 0.00 0.00 0.00 4.79
141 142 2.706190 GGTATGTAGATGCACTCCCCTT 59.294 50.000 0.00 0.00 0.00 3.95
142 143 3.244249 GGTATGTAGATGCACTCCCCTTC 60.244 52.174 0.00 0.00 0.00 3.46
143 144 1.204146 TGTAGATGCACTCCCCTTCC 58.796 55.000 0.00 0.00 0.00 3.46
144 145 0.470341 GTAGATGCACTCCCCTTCCC 59.530 60.000 0.00 0.00 0.00 3.97
145 146 0.694444 TAGATGCACTCCCCTTCCCC 60.694 60.000 0.00 0.00 0.00 4.81
146 147 2.003548 GATGCACTCCCCTTCCCCT 61.004 63.158 0.00 0.00 0.00 4.79
147 148 1.988982 GATGCACTCCCCTTCCCCTC 61.989 65.000 0.00 0.00 0.00 4.30
148 149 3.787001 GCACTCCCCTTCCCCTCG 61.787 72.222 0.00 0.00 0.00 4.63
149 150 2.284699 CACTCCCCTTCCCCTCGT 60.285 66.667 0.00 0.00 0.00 4.18
150 151 1.918800 CACTCCCCTTCCCCTCGTT 60.919 63.158 0.00 0.00 0.00 3.85
151 152 1.918800 ACTCCCCTTCCCCTCGTTG 60.919 63.158 0.00 0.00 0.00 4.10
152 153 3.327404 TCCCCTTCCCCTCGTTGC 61.327 66.667 0.00 0.00 0.00 4.17
153 154 3.330720 CCCCTTCCCCTCGTTGCT 61.331 66.667 0.00 0.00 0.00 3.91
154 155 1.993391 CCCCTTCCCCTCGTTGCTA 60.993 63.158 0.00 0.00 0.00 3.49
155 156 1.522569 CCCTTCCCCTCGTTGCTAG 59.477 63.158 0.00 0.00 0.00 3.42
156 157 0.976073 CCCTTCCCCTCGTTGCTAGA 60.976 60.000 0.00 0.00 0.00 2.43
157 158 1.123928 CCTTCCCCTCGTTGCTAGAT 58.876 55.000 0.00 0.00 0.00 1.98
158 159 1.486726 CCTTCCCCTCGTTGCTAGATT 59.513 52.381 0.00 0.00 0.00 2.40
159 160 2.698797 CCTTCCCCTCGTTGCTAGATTA 59.301 50.000 0.00 0.00 0.00 1.75
160 161 3.492829 CCTTCCCCTCGTTGCTAGATTAC 60.493 52.174 0.00 0.00 0.00 1.89
161 162 3.028094 TCCCCTCGTTGCTAGATTACT 57.972 47.619 0.00 0.00 0.00 2.24
162 163 2.957006 TCCCCTCGTTGCTAGATTACTC 59.043 50.000 0.00 0.00 0.00 2.59
163 164 2.036089 CCCCTCGTTGCTAGATTACTCC 59.964 54.545 0.00 0.00 0.00 3.85
164 165 2.693591 CCCTCGTTGCTAGATTACTCCA 59.306 50.000 0.00 0.00 0.00 3.86
165 166 3.322254 CCCTCGTTGCTAGATTACTCCAT 59.678 47.826 0.00 0.00 0.00 3.41
166 167 4.523173 CCCTCGTTGCTAGATTACTCCATA 59.477 45.833 0.00 0.00 0.00 2.74
167 168 5.336055 CCCTCGTTGCTAGATTACTCCATAG 60.336 48.000 0.00 0.00 0.00 2.23
168 169 5.473846 CCTCGTTGCTAGATTACTCCATAGA 59.526 44.000 0.00 0.00 0.00 1.98
169 170 6.151985 CCTCGTTGCTAGATTACTCCATAGAT 59.848 42.308 0.00 0.00 0.00 1.98
170 171 7.309499 CCTCGTTGCTAGATTACTCCATAGATT 60.309 40.741 0.00 0.00 0.00 2.40
171 172 7.371159 TCGTTGCTAGATTACTCCATAGATTG 58.629 38.462 0.00 0.00 0.00 2.67
172 173 7.230712 TCGTTGCTAGATTACTCCATAGATTGA 59.769 37.037 0.00 0.00 0.00 2.57
173 174 8.031864 CGTTGCTAGATTACTCCATAGATTGAT 58.968 37.037 0.00 0.00 0.00 2.57
174 175 9.364989 GTTGCTAGATTACTCCATAGATTGATC 57.635 37.037 0.00 0.00 0.00 2.92
175 176 8.891985 TGCTAGATTACTCCATAGATTGATCT 57.108 34.615 0.00 0.00 40.86 2.75
176 177 9.319060 TGCTAGATTACTCCATAGATTGATCTT 57.681 33.333 0.00 0.00 38.32 2.40
177 178 9.585099 GCTAGATTACTCCATAGATTGATCTTG 57.415 37.037 0.00 0.00 38.32 3.02
179 180 8.503428 AGATTACTCCATAGATTGATCTTGGT 57.497 34.615 15.48 6.45 38.32 3.67
180 181 8.373981 AGATTACTCCATAGATTGATCTTGGTG 58.626 37.037 15.48 15.28 38.32 4.17
181 182 7.675161 TTACTCCATAGATTGATCTTGGTGA 57.325 36.000 19.38 6.63 38.32 4.02
182 183 5.923204 ACTCCATAGATTGATCTTGGTGAC 58.077 41.667 19.38 0.00 38.32 3.67
183 184 4.948847 TCCATAGATTGATCTTGGTGACG 58.051 43.478 15.48 0.00 38.32 4.35
184 185 3.496130 CCATAGATTGATCTTGGTGACGC 59.504 47.826 0.00 0.00 38.32 5.19
185 186 1.645034 AGATTGATCTTGGTGACGCG 58.355 50.000 3.53 3.53 31.97 6.01
186 187 1.066858 AGATTGATCTTGGTGACGCGT 60.067 47.619 13.85 13.85 31.97 6.01
187 188 2.165641 AGATTGATCTTGGTGACGCGTA 59.834 45.455 13.97 0.00 31.97 4.42
188 189 1.990799 TTGATCTTGGTGACGCGTAG 58.009 50.000 13.97 5.50 0.00 3.51
189 190 1.170442 TGATCTTGGTGACGCGTAGA 58.830 50.000 13.97 12.05 0.00 2.59
190 191 1.542472 TGATCTTGGTGACGCGTAGAA 59.458 47.619 13.97 0.00 0.00 2.10
191 192 2.029739 TGATCTTGGTGACGCGTAGAAA 60.030 45.455 13.97 3.68 0.00 2.52
192 193 2.512485 TCTTGGTGACGCGTAGAAAA 57.488 45.000 13.97 4.09 0.00 2.29
193 194 3.034721 TCTTGGTGACGCGTAGAAAAT 57.965 42.857 13.97 0.00 0.00 1.82
194 195 3.395639 TCTTGGTGACGCGTAGAAAATT 58.604 40.909 13.97 0.00 0.00 1.82
195 196 3.810941 TCTTGGTGACGCGTAGAAAATTT 59.189 39.130 13.97 0.00 0.00 1.82
196 197 4.273969 TCTTGGTGACGCGTAGAAAATTTT 59.726 37.500 13.97 2.28 0.00 1.82
197 198 3.879427 TGGTGACGCGTAGAAAATTTTG 58.121 40.909 13.97 0.00 0.00 2.44
198 199 3.560481 TGGTGACGCGTAGAAAATTTTGA 59.440 39.130 13.97 0.00 0.00 2.69
199 200 4.035324 TGGTGACGCGTAGAAAATTTTGAA 59.965 37.500 13.97 0.00 0.00 2.69
200 201 5.151389 GGTGACGCGTAGAAAATTTTGAAT 58.849 37.500 13.97 0.00 0.00 2.57
201 202 5.627780 GGTGACGCGTAGAAAATTTTGAATT 59.372 36.000 13.97 0.00 0.00 2.17
202 203 6.143278 GGTGACGCGTAGAAAATTTTGAATTT 59.857 34.615 13.97 0.00 0.00 1.82
203 204 7.211117 GTGACGCGTAGAAAATTTTGAATTTC 58.789 34.615 13.97 0.00 36.11 2.17
204 205 7.112984 GTGACGCGTAGAAAATTTTGAATTTCT 59.887 33.333 13.97 0.48 45.29 2.52
205 206 7.112844 TGACGCGTAGAAAATTTTGAATTTCTG 59.887 33.333 13.97 0.00 43.67 3.02
206 207 6.129194 ACGCGTAGAAAATTTTGAATTTCTGC 60.129 34.615 11.67 8.21 43.67 4.26
207 208 6.088085 CGCGTAGAAAATTTTGAATTTCTGCT 59.912 34.615 8.47 0.00 43.67 4.24
208 209 7.270365 CGCGTAGAAAATTTTGAATTTCTGCTA 59.730 33.333 8.47 0.00 43.67 3.49
209 210 8.365938 GCGTAGAAAATTTTGAATTTCTGCTAC 58.634 33.333 8.47 8.90 43.67 3.58
210 211 8.567221 CGTAGAAAATTTTGAATTTCTGCTACG 58.433 33.333 22.91 22.91 43.67 3.51
211 212 9.394477 GTAGAAAATTTTGAATTTCTGCTACGT 57.606 29.630 8.47 0.00 43.67 3.57
212 213 8.871686 AGAAAATTTTGAATTTCTGCTACGTT 57.128 26.923 8.47 0.00 42.62 3.99
213 214 8.968242 AGAAAATTTTGAATTTCTGCTACGTTC 58.032 29.630 8.47 0.00 42.62 3.95
214 215 7.637709 AAATTTTGAATTTCTGCTACGTTCC 57.362 32.000 0.00 0.00 0.00 3.62
215 216 4.759516 TTTGAATTTCTGCTACGTTCCC 57.240 40.909 0.00 0.00 0.00 3.97
216 217 2.706890 TGAATTTCTGCTACGTTCCCC 58.293 47.619 0.00 0.00 0.00 4.81
217 218 2.039216 TGAATTTCTGCTACGTTCCCCA 59.961 45.455 0.00 0.00 0.00 4.96
218 219 2.871096 ATTTCTGCTACGTTCCCCAA 57.129 45.000 0.00 0.00 0.00 4.12
219 220 1.886886 TTTCTGCTACGTTCCCCAAC 58.113 50.000 0.00 0.00 0.00 3.77
220 221 0.759959 TTCTGCTACGTTCCCCAACA 59.240 50.000 0.00 0.00 32.14 3.33
221 222 0.320374 TCTGCTACGTTCCCCAACAG 59.680 55.000 0.00 0.00 32.14 3.16
222 223 0.673644 CTGCTACGTTCCCCAACAGG 60.674 60.000 0.00 0.00 32.14 4.00
223 224 1.122632 TGCTACGTTCCCCAACAGGA 61.123 55.000 0.00 0.00 38.24 3.86
224 225 0.035739 GCTACGTTCCCCAACAGGAA 59.964 55.000 0.00 0.00 43.77 3.36
225 226 1.944430 GCTACGTTCCCCAACAGGAAG 60.944 57.143 0.00 0.00 46.55 3.46
226 227 4.397348 CGTTCCCCAACAGGAAGG 57.603 61.111 0.00 0.00 46.55 3.46
228 229 3.652581 GTTCCCCAACAGGAAGGAG 57.347 57.895 0.00 0.00 46.55 3.69
229 230 1.064825 GTTCCCCAACAGGAAGGAGA 58.935 55.000 0.00 0.00 46.55 3.71
230 231 1.003696 GTTCCCCAACAGGAAGGAGAG 59.996 57.143 0.00 0.00 46.55 3.20
231 232 0.547712 TCCCCAACAGGAAGGAGAGG 60.548 60.000 0.00 0.00 38.24 3.69
232 233 1.566298 CCCCAACAGGAAGGAGAGGG 61.566 65.000 0.00 0.00 38.24 4.30
233 234 1.566298 CCCAACAGGAAGGAGAGGGG 61.566 65.000 0.00 0.00 38.24 4.79
234 235 1.566298 CCAACAGGAAGGAGAGGGGG 61.566 65.000 0.00 0.00 0.00 5.40
250 251 3.584403 GGGGGAGGGGGATCATGC 61.584 72.222 0.00 0.00 0.00 4.06
251 252 2.778278 GGGGAGGGGGATCATGCA 60.778 66.667 0.00 0.00 0.00 3.96
252 253 2.838467 GGGGAGGGGGATCATGCAG 61.838 68.421 0.00 0.00 0.00 4.41
253 254 2.081161 GGGAGGGGGATCATGCAGT 61.081 63.158 0.00 0.00 0.00 4.40
254 255 0.768221 GGGAGGGGGATCATGCAGTA 60.768 60.000 0.00 0.00 0.00 2.74
255 256 1.366319 GGAGGGGGATCATGCAGTAT 58.634 55.000 0.00 0.00 0.00 2.12
256 257 1.004044 GGAGGGGGATCATGCAGTATG 59.996 57.143 0.00 0.00 38.17 2.39
268 269 2.780595 CAGTATGCCCCAAACTCGG 58.219 57.895 0.00 0.00 0.00 4.63
269 270 0.035439 CAGTATGCCCCAAACTCGGT 60.035 55.000 0.00 0.00 0.00 4.69
270 271 1.208535 CAGTATGCCCCAAACTCGGTA 59.791 52.381 0.00 0.00 0.00 4.02
271 272 1.208776 AGTATGCCCCAAACTCGGTAC 59.791 52.381 0.00 0.00 0.00 3.34
272 273 1.208776 GTATGCCCCAAACTCGGTACT 59.791 52.381 0.00 0.00 0.00 2.73
273 274 0.696501 ATGCCCCAAACTCGGTACTT 59.303 50.000 0.00 0.00 0.00 2.24
274 275 0.035739 TGCCCCAAACTCGGTACTTC 59.964 55.000 0.00 0.00 0.00 3.01
275 276 1.017701 GCCCCAAACTCGGTACTTCG 61.018 60.000 0.00 0.00 0.00 3.79
276 277 0.390735 CCCCAAACTCGGTACTTCGG 60.391 60.000 0.00 0.00 0.00 4.30
277 278 0.319405 CCCAAACTCGGTACTTCGGT 59.681 55.000 0.00 0.00 0.00 4.69
278 279 1.545582 CCCAAACTCGGTACTTCGGTA 59.454 52.381 0.00 0.00 0.00 4.02
288 289 3.777465 GTACTTCGGTACTGATCTGCA 57.223 47.619 4.94 0.00 45.22 4.41
289 290 4.106029 GTACTTCGGTACTGATCTGCAA 57.894 45.455 4.94 0.00 45.22 4.08
290 291 3.678056 ACTTCGGTACTGATCTGCAAA 57.322 42.857 4.94 0.00 0.00 3.68
291 292 4.002906 ACTTCGGTACTGATCTGCAAAA 57.997 40.909 4.94 0.00 0.00 2.44
292 293 4.385825 ACTTCGGTACTGATCTGCAAAAA 58.614 39.130 4.94 0.00 0.00 1.94
312 313 5.959583 AAAAGAGATACCAGTTCCCCTAG 57.040 43.478 0.00 0.00 0.00 3.02
313 314 2.965562 AGAGATACCAGTTCCCCTAGC 58.034 52.381 0.00 0.00 0.00 3.42
314 315 1.972075 GAGATACCAGTTCCCCTAGCC 59.028 57.143 0.00 0.00 0.00 3.93
315 316 1.581149 AGATACCAGTTCCCCTAGCCT 59.419 52.381 0.00 0.00 0.00 4.58
316 317 1.972075 GATACCAGTTCCCCTAGCCTC 59.028 57.143 0.00 0.00 0.00 4.70
317 318 0.714180 TACCAGTTCCCCTAGCCTCA 59.286 55.000 0.00 0.00 0.00 3.86
318 319 0.618968 ACCAGTTCCCCTAGCCTCAG 60.619 60.000 0.00 0.00 0.00 3.35
319 320 0.325671 CCAGTTCCCCTAGCCTCAGA 60.326 60.000 0.00 0.00 0.00 3.27
320 321 1.694048 CCAGTTCCCCTAGCCTCAGAT 60.694 57.143 0.00 0.00 0.00 2.90
321 322 1.415659 CAGTTCCCCTAGCCTCAGATG 59.584 57.143 0.00 0.00 0.00 2.90
322 323 1.008938 AGTTCCCCTAGCCTCAGATGT 59.991 52.381 0.00 0.00 0.00 3.06
323 324 1.139853 GTTCCCCTAGCCTCAGATGTG 59.860 57.143 0.00 0.00 0.00 3.21
324 325 0.339859 TCCCCTAGCCTCAGATGTGT 59.660 55.000 0.00 0.00 0.00 3.72
325 326 1.207791 CCCCTAGCCTCAGATGTGTT 58.792 55.000 0.00 0.00 0.00 3.32
326 327 2.023404 TCCCCTAGCCTCAGATGTGTTA 60.023 50.000 0.00 0.00 0.00 2.41
327 328 2.103263 CCCCTAGCCTCAGATGTGTTAC 59.897 54.545 0.00 0.00 0.00 2.50
328 329 2.103263 CCCTAGCCTCAGATGTGTTACC 59.897 54.545 0.00 0.00 0.00 2.85
329 330 2.766263 CCTAGCCTCAGATGTGTTACCA 59.234 50.000 0.00 0.00 0.00 3.25
330 331 3.389329 CCTAGCCTCAGATGTGTTACCAT 59.611 47.826 0.00 0.00 0.00 3.55
331 332 3.550437 AGCCTCAGATGTGTTACCATC 57.450 47.619 5.94 5.94 41.27 3.51
332 333 2.840038 AGCCTCAGATGTGTTACCATCA 59.160 45.455 13.42 0.00 43.00 3.07
333 334 3.457380 AGCCTCAGATGTGTTACCATCAT 59.543 43.478 13.42 1.86 43.00 2.45
334 335 4.655649 AGCCTCAGATGTGTTACCATCATA 59.344 41.667 13.42 3.73 43.00 2.15
335 336 4.752101 GCCTCAGATGTGTTACCATCATAC 59.248 45.833 13.42 0.00 43.00 2.39
336 337 5.684813 GCCTCAGATGTGTTACCATCATACA 60.685 44.000 13.42 0.00 43.00 2.29
337 338 6.348498 CCTCAGATGTGTTACCATCATACAA 58.652 40.000 13.42 0.00 43.00 2.41
338 339 6.994496 CCTCAGATGTGTTACCATCATACAAT 59.006 38.462 13.42 0.00 43.00 2.71
339 340 7.500227 CCTCAGATGTGTTACCATCATACAATT 59.500 37.037 13.42 0.00 43.00 2.32
340 341 9.546428 CTCAGATGTGTTACCATCATACAATTA 57.454 33.333 13.42 0.00 43.00 1.40
341 342 9.898152 TCAGATGTGTTACCATCATACAATTAA 57.102 29.630 13.42 0.00 43.00 1.40
342 343 9.935682 CAGATGTGTTACCATCATACAATTAAC 57.064 33.333 13.42 0.00 43.00 2.01
343 344 9.905713 AGATGTGTTACCATCATACAATTAACT 57.094 29.630 13.42 0.00 43.00 2.24
346 347 9.508642 TGTGTTACCATCATACAATTAACTTGA 57.491 29.630 5.11 0.00 38.29 3.02
347 348 9.769093 GTGTTACCATCATACAATTAACTTGAC 57.231 33.333 5.11 0.00 38.29 3.18
348 349 9.508642 TGTTACCATCATACAATTAACTTGACA 57.491 29.630 5.11 0.00 38.29 3.58
349 350 9.988350 GTTACCATCATACAATTAACTTGACAG 57.012 33.333 5.11 0.00 38.29 3.51
350 351 9.952030 TTACCATCATACAATTAACTTGACAGA 57.048 29.630 5.11 0.00 38.29 3.41
351 352 8.862325 ACCATCATACAATTAACTTGACAGAA 57.138 30.769 5.11 0.00 38.29 3.02
352 353 8.950210 ACCATCATACAATTAACTTGACAGAAG 58.050 33.333 5.11 0.00 38.29 2.85
353 354 8.950210 CCATCATACAATTAACTTGACAGAAGT 58.050 33.333 5.11 0.00 38.29 3.01
356 357 9.431887 TCATACAATTAACTTGACAGAAGTACC 57.568 33.333 0.00 0.00 38.29 3.34
357 358 9.214957 CATACAATTAACTTGACAGAAGTACCA 57.785 33.333 0.00 0.00 38.29 3.25
358 359 9.787435 ATACAATTAACTTGACAGAAGTACCAA 57.213 29.630 0.00 0.00 38.29 3.67
359 360 8.514330 ACAATTAACTTGACAGAAGTACCAAA 57.486 30.769 0.00 0.00 38.29 3.28
360 361 8.403236 ACAATTAACTTGACAGAAGTACCAAAC 58.597 33.333 0.00 0.00 38.29 2.93
361 362 8.402472 CAATTAACTTGACAGAAGTACCAAACA 58.598 33.333 0.00 0.00 36.97 2.83
362 363 7.925043 TTAACTTGACAGAAGTACCAAACAA 57.075 32.000 0.00 0.00 0.00 2.83
363 364 6.436843 AACTTGACAGAAGTACCAAACAAG 57.563 37.500 0.00 0.00 39.17 3.16
364 365 4.335594 ACTTGACAGAAGTACCAAACAAGC 59.664 41.667 0.00 0.00 37.55 4.01
365 366 3.211045 TGACAGAAGTACCAAACAAGCC 58.789 45.455 0.00 0.00 0.00 4.35
366 367 2.552743 GACAGAAGTACCAAACAAGCCC 59.447 50.000 0.00 0.00 0.00 5.19
367 368 2.174854 ACAGAAGTACCAAACAAGCCCT 59.825 45.455 0.00 0.00 0.00 5.19
368 369 3.222603 CAGAAGTACCAAACAAGCCCTT 58.777 45.455 0.00 0.00 0.00 3.95
369 370 4.141344 ACAGAAGTACCAAACAAGCCCTTA 60.141 41.667 0.00 0.00 0.00 2.69
370 371 5.010282 CAGAAGTACCAAACAAGCCCTTAT 58.990 41.667 0.00 0.00 0.00 1.73
371 372 5.010282 AGAAGTACCAAACAAGCCCTTATG 58.990 41.667 0.00 0.00 0.00 1.90
372 373 3.089284 AGTACCAAACAAGCCCTTATGC 58.911 45.455 0.00 0.00 0.00 3.14
373 374 0.887933 ACCAAACAAGCCCTTATGCG 59.112 50.000 0.00 0.00 36.02 4.73
374 375 0.887933 CCAAACAAGCCCTTATGCGT 59.112 50.000 0.00 0.00 36.02 5.24
375 376 2.088423 CCAAACAAGCCCTTATGCGTA 58.912 47.619 0.00 0.00 36.02 4.42
376 377 2.159435 CCAAACAAGCCCTTATGCGTAC 60.159 50.000 0.00 0.00 36.02 3.67
377 378 1.365699 AACAAGCCCTTATGCGTACG 58.634 50.000 11.84 11.84 36.02 3.67
378 379 0.533491 ACAAGCCCTTATGCGTACGA 59.467 50.000 21.65 4.52 36.02 3.43
379 380 1.209128 CAAGCCCTTATGCGTACGAG 58.791 55.000 21.65 7.12 36.02 4.18
380 381 1.108776 AAGCCCTTATGCGTACGAGA 58.891 50.000 21.65 4.42 36.02 4.04
381 382 1.329256 AGCCCTTATGCGTACGAGAT 58.671 50.000 21.65 12.27 36.02 2.75
382 383 2.511659 AGCCCTTATGCGTACGAGATA 58.488 47.619 21.65 11.21 36.02 1.98
383 384 2.488545 AGCCCTTATGCGTACGAGATAG 59.511 50.000 21.65 9.93 36.02 2.08
384 385 2.864968 CCCTTATGCGTACGAGATAGC 58.135 52.381 21.65 0.00 0.00 2.97
385 386 2.488545 CCCTTATGCGTACGAGATAGCT 59.511 50.000 21.65 0.00 0.00 3.32
386 387 3.057456 CCCTTATGCGTACGAGATAGCTT 60.057 47.826 21.65 0.55 0.00 3.74
387 388 4.155462 CCCTTATGCGTACGAGATAGCTTA 59.845 45.833 21.65 0.00 0.00 3.09
388 389 5.325494 CCTTATGCGTACGAGATAGCTTAG 58.675 45.833 21.65 8.03 0.00 2.18
389 390 3.833545 ATGCGTACGAGATAGCTTAGG 57.166 47.619 21.65 0.00 0.00 2.69
390 391 1.266175 TGCGTACGAGATAGCTTAGGC 59.734 52.381 21.65 0.00 39.06 3.93
402 403 0.323302 GCTTAGGCTGGATAGGGAGC 59.677 60.000 0.00 0.00 35.22 4.70
403 404 2.022718 CTTAGGCTGGATAGGGAGCT 57.977 55.000 0.00 0.00 35.42 4.09
404 405 1.622811 CTTAGGCTGGATAGGGAGCTG 59.377 57.143 0.00 0.00 35.42 4.24
405 406 0.833834 TAGGCTGGATAGGGAGCTGC 60.834 60.000 0.00 0.00 35.42 5.25
406 407 2.446848 GGCTGGATAGGGAGCTGCA 61.447 63.158 7.79 0.00 35.42 4.41
407 408 1.759881 GCTGGATAGGGAGCTGCAT 59.240 57.895 7.79 1.39 32.12 3.96
408 409 0.979665 GCTGGATAGGGAGCTGCATA 59.020 55.000 7.79 4.39 32.12 3.14
409 410 1.066286 GCTGGATAGGGAGCTGCATAG 60.066 57.143 7.79 0.00 32.12 2.23
410 411 1.554160 CTGGATAGGGAGCTGCATAGG 59.446 57.143 7.79 0.00 0.00 2.57
411 412 1.149923 TGGATAGGGAGCTGCATAGGA 59.850 52.381 7.79 0.00 0.00 2.94
412 413 2.225727 TGGATAGGGAGCTGCATAGGAT 60.226 50.000 7.79 0.00 0.00 3.24
413 414 3.012844 TGGATAGGGAGCTGCATAGGATA 59.987 47.826 7.79 0.00 0.00 2.59
414 415 3.640967 GGATAGGGAGCTGCATAGGATAG 59.359 52.174 7.79 0.00 0.00 2.08
415 416 1.949799 AGGGAGCTGCATAGGATAGG 58.050 55.000 7.79 0.00 0.00 2.57
416 417 1.434773 AGGGAGCTGCATAGGATAGGA 59.565 52.381 7.79 0.00 0.00 2.94
417 418 1.830477 GGGAGCTGCATAGGATAGGAG 59.170 57.143 7.79 0.00 0.00 3.69
418 419 2.558575 GGGAGCTGCATAGGATAGGAGA 60.559 54.545 7.79 0.00 0.00 3.71
419 420 3.373830 GGAGCTGCATAGGATAGGAGAT 58.626 50.000 0.00 0.00 0.00 2.75
420 421 4.541705 GGAGCTGCATAGGATAGGAGATA 58.458 47.826 0.00 0.00 0.00 1.98
421 422 5.147032 GGAGCTGCATAGGATAGGAGATAT 58.853 45.833 0.00 0.00 0.00 1.63
422 423 5.243730 GGAGCTGCATAGGATAGGAGATATC 59.756 48.000 0.00 0.00 39.78 1.63
423 424 5.775268 AGCTGCATAGGATAGGAGATATCA 58.225 41.667 5.32 0.00 41.94 2.15
424 425 6.383763 AGCTGCATAGGATAGGAGATATCAT 58.616 40.000 5.32 0.00 41.94 2.45
425 426 6.268158 AGCTGCATAGGATAGGAGATATCATG 59.732 42.308 5.32 0.00 41.94 3.07
426 427 6.267242 GCTGCATAGGATAGGAGATATCATGA 59.733 42.308 5.32 0.00 41.94 3.07
427 428 7.038870 GCTGCATAGGATAGGAGATATCATGAT 60.039 40.741 13.81 13.81 41.94 2.45
428 429 8.191534 TGCATAGGATAGGAGATATCATGATG 57.808 38.462 18.72 0.00 41.94 3.07
429 430 7.234988 TGCATAGGATAGGAGATATCATGATGG 59.765 40.741 18.72 0.00 41.94 3.51
430 431 7.310547 GCATAGGATAGGAGATATCATGATGGG 60.311 44.444 18.72 0.00 41.94 4.00
431 432 6.367047 AGGATAGGAGATATCATGATGGGA 57.633 41.667 18.72 0.00 41.94 4.37
432 433 6.947681 AGGATAGGAGATATCATGATGGGAT 58.052 40.000 18.72 3.69 41.94 3.85
433 434 7.379953 AGGATAGGAGATATCATGATGGGATT 58.620 38.462 18.72 2.55 41.94 3.01
434 435 8.526435 AGGATAGGAGATATCATGATGGGATTA 58.474 37.037 18.72 4.61 41.94 1.75
435 436 8.814931 GGATAGGAGATATCATGATGGGATTAG 58.185 40.741 18.72 0.00 41.94 1.73
436 437 9.378504 GATAGGAGATATCATGATGGGATTAGT 57.621 37.037 18.72 0.00 40.18 2.24
437 438 9.741198 ATAGGAGATATCATGATGGGATTAGTT 57.259 33.333 18.72 0.00 0.00 2.24
439 440 9.211410 AGGAGATATCATGATGGGATTAGTTAG 57.789 37.037 18.72 0.00 0.00 2.34
440 441 9.206690 GGAGATATCATGATGGGATTAGTTAGA 57.793 37.037 18.72 0.00 0.00 2.10
446 447 9.736414 ATCATGATGGGATTAGTTAGATTCTTG 57.264 33.333 7.59 0.00 0.00 3.02
447 448 7.663081 TCATGATGGGATTAGTTAGATTCTTGC 59.337 37.037 0.00 0.00 0.00 4.01
448 449 7.141758 TGATGGGATTAGTTAGATTCTTGCT 57.858 36.000 0.00 0.00 0.00 3.91
449 450 8.262601 TGATGGGATTAGTTAGATTCTTGCTA 57.737 34.615 0.00 0.00 0.00 3.49
450 451 8.370940 TGATGGGATTAGTTAGATTCTTGCTAG 58.629 37.037 0.00 0.00 0.00 3.42
451 452 6.525629 TGGGATTAGTTAGATTCTTGCTAGC 58.474 40.000 8.10 8.10 0.00 3.42
452 453 6.327626 TGGGATTAGTTAGATTCTTGCTAGCT 59.672 38.462 17.23 0.00 34.44 3.32
453 454 6.871492 GGGATTAGTTAGATTCTTGCTAGCTC 59.129 42.308 17.23 4.43 32.66 4.09
454 455 6.871492 GGATTAGTTAGATTCTTGCTAGCTCC 59.129 42.308 17.23 4.54 32.66 4.70
455 456 6.791867 TTAGTTAGATTCTTGCTAGCTCCA 57.208 37.500 17.23 0.00 32.66 3.86
456 457 5.885449 AGTTAGATTCTTGCTAGCTCCAT 57.115 39.130 17.23 2.63 0.00 3.41
457 458 5.609423 AGTTAGATTCTTGCTAGCTCCATG 58.391 41.667 17.23 0.00 0.00 3.66
458 459 5.130145 AGTTAGATTCTTGCTAGCTCCATGT 59.870 40.000 17.23 4.22 0.00 3.21
459 460 3.806380 AGATTCTTGCTAGCTCCATGTG 58.194 45.455 17.23 0.00 0.00 3.21
460 461 1.742761 TTCTTGCTAGCTCCATGTGC 58.257 50.000 17.23 0.00 0.00 4.57
461 462 0.614812 TCTTGCTAGCTCCATGTGCA 59.385 50.000 17.23 0.00 0.00 4.57
462 463 1.211212 TCTTGCTAGCTCCATGTGCAT 59.789 47.619 17.23 0.00 33.50 3.96
463 464 1.333931 CTTGCTAGCTCCATGTGCATG 59.666 52.381 17.23 5.26 38.51 4.06
473 474 1.311859 CATGTGCATGGCCGATTAGT 58.688 50.000 0.00 0.00 35.24 2.24
474 475 2.493035 CATGTGCATGGCCGATTAGTA 58.507 47.619 0.00 0.00 35.24 1.82
475 476 1.948104 TGTGCATGGCCGATTAGTAC 58.052 50.000 0.00 0.00 0.00 2.73
476 477 1.208293 TGTGCATGGCCGATTAGTACA 59.792 47.619 0.00 0.00 0.00 2.90
477 478 2.285083 GTGCATGGCCGATTAGTACAA 58.715 47.619 0.00 0.00 0.00 2.41
478 479 2.878406 GTGCATGGCCGATTAGTACAAT 59.122 45.455 0.00 0.00 0.00 2.71
479 480 4.062293 GTGCATGGCCGATTAGTACAATA 58.938 43.478 0.00 0.00 0.00 1.90
480 481 4.062293 TGCATGGCCGATTAGTACAATAC 58.938 43.478 0.00 0.00 0.00 1.89
481 482 4.062293 GCATGGCCGATTAGTACAATACA 58.938 43.478 0.00 0.00 0.00 2.29
484 485 4.114073 TGGCCGATTAGTACAATACAACG 58.886 43.478 0.00 0.00 0.00 4.10
581 582 3.072768 TGGTATTTTACACCCACGGACTT 59.927 43.478 0.00 0.00 34.99 3.01
582 583 4.074259 GGTATTTTACACCCACGGACTTT 58.926 43.478 0.00 0.00 0.00 2.66
583 584 4.520111 GGTATTTTACACCCACGGACTTTT 59.480 41.667 0.00 0.00 0.00 2.27
584 585 5.009911 GGTATTTTACACCCACGGACTTTTT 59.990 40.000 0.00 0.00 0.00 1.94
607 608 5.395682 TTTTCTGAGAAAAGGCCATCATG 57.604 39.130 15.81 0.00 0.00 3.07
608 609 3.726557 TCTGAGAAAAGGCCATCATGT 57.273 42.857 5.01 0.00 0.00 3.21
609 610 3.614092 TCTGAGAAAAGGCCATCATGTC 58.386 45.455 5.01 0.00 0.00 3.06
610 611 3.265221 TCTGAGAAAAGGCCATCATGTCT 59.735 43.478 5.01 0.00 0.00 3.41
611 612 4.471025 TCTGAGAAAAGGCCATCATGTCTA 59.529 41.667 5.01 0.00 0.00 2.59
612 613 4.774124 TGAGAAAAGGCCATCATGTCTAG 58.226 43.478 5.01 0.00 0.00 2.43
613 614 3.549794 AGAAAAGGCCATCATGTCTAGC 58.450 45.455 5.01 0.00 0.00 3.42
614 615 3.201708 AGAAAAGGCCATCATGTCTAGCT 59.798 43.478 5.01 0.00 0.00 3.32
615 616 3.659183 AAAGGCCATCATGTCTAGCTT 57.341 42.857 5.01 0.00 0.00 3.74
616 617 3.659183 AAGGCCATCATGTCTAGCTTT 57.341 42.857 5.01 0.00 0.00 3.51
617 618 4.778213 AAGGCCATCATGTCTAGCTTTA 57.222 40.909 5.01 0.00 0.00 1.85
618 619 4.989875 AGGCCATCATGTCTAGCTTTAT 57.010 40.909 5.01 0.00 0.00 1.40
619 620 5.316158 AGGCCATCATGTCTAGCTTTATT 57.684 39.130 5.01 0.00 0.00 1.40
620 621 5.068636 AGGCCATCATGTCTAGCTTTATTG 58.931 41.667 5.01 0.00 0.00 1.90
621 622 5.065914 GGCCATCATGTCTAGCTTTATTGA 58.934 41.667 0.00 0.00 0.00 2.57
622 623 5.049129 GGCCATCATGTCTAGCTTTATTGAC 60.049 44.000 0.00 0.00 0.00 3.18
623 624 5.762218 GCCATCATGTCTAGCTTTATTGACT 59.238 40.000 0.00 0.00 0.00 3.41
624 625 6.931281 GCCATCATGTCTAGCTTTATTGACTA 59.069 38.462 0.00 0.00 0.00 2.59
625 626 7.442364 GCCATCATGTCTAGCTTTATTGACTAA 59.558 37.037 0.00 0.00 0.00 2.24
626 627 9.330063 CCATCATGTCTAGCTTTATTGACTAAA 57.670 33.333 0.00 0.00 0.00 1.85
677 678 9.787532 TTTCAATACTTTGCTATCAAACATAGC 57.212 29.630 6.66 6.66 45.28 2.97
678 679 7.930217 TCAATACTTTGCTATCAAACATAGCC 58.070 34.615 10.40 0.00 44.66 3.93
679 680 7.555914 TCAATACTTTGCTATCAAACATAGCCA 59.444 33.333 10.40 0.00 44.66 4.75
680 681 8.355169 CAATACTTTGCTATCAAACATAGCCAT 58.645 33.333 10.40 0.00 44.66 4.40
681 682 9.573166 AATACTTTGCTATCAAACATAGCCATA 57.427 29.630 10.40 0.43 44.66 2.74
682 683 7.880160 ACTTTGCTATCAAACATAGCCATAA 57.120 32.000 10.40 3.19 44.66 1.90
683 684 8.469309 ACTTTGCTATCAAACATAGCCATAAT 57.531 30.769 10.40 0.00 44.66 1.28
684 685 8.355169 ACTTTGCTATCAAACATAGCCATAATG 58.645 33.333 10.40 4.64 44.66 1.90
685 686 6.258230 TGCTATCAAACATAGCCATAATGC 57.742 37.500 10.40 0.00 44.66 3.56
686 687 6.005823 TGCTATCAAACATAGCCATAATGCT 58.994 36.000 10.40 0.00 44.66 3.79
687 688 6.491062 TGCTATCAAACATAGCCATAATGCTT 59.509 34.615 10.40 0.00 44.66 3.91
688 689 7.014518 TGCTATCAAACATAGCCATAATGCTTT 59.985 33.333 10.40 0.00 44.66 3.51
689 690 7.869429 GCTATCAAACATAGCCATAATGCTTTT 59.131 33.333 2.67 0.00 42.75 2.27
690 691 9.754382 CTATCAAACATAGCCATAATGCTTTTT 57.246 29.630 0.00 0.00 42.75 1.94
691 692 8.652810 ATCAAACATAGCCATAATGCTTTTTC 57.347 30.769 0.00 0.00 42.75 2.29
692 693 7.839907 TCAAACATAGCCATAATGCTTTTTCT 58.160 30.769 0.00 0.00 42.75 2.52
693 694 8.313292 TCAAACATAGCCATAATGCTTTTTCTT 58.687 29.630 0.00 0.00 42.75 2.52
694 695 9.585099 CAAACATAGCCATAATGCTTTTTCTTA 57.415 29.630 0.00 0.00 42.75 2.10
695 696 9.807649 AAACATAGCCATAATGCTTTTTCTTAG 57.192 29.630 0.00 0.00 42.75 2.18
696 697 7.945134 ACATAGCCATAATGCTTTTTCTTAGG 58.055 34.615 0.00 0.00 42.75 2.69
697 698 5.859205 AGCCATAATGCTTTTTCTTAGGG 57.141 39.130 0.00 0.00 38.85 3.53
698 699 5.518865 AGCCATAATGCTTTTTCTTAGGGA 58.481 37.500 0.00 0.00 38.85 4.20
699 700 5.957774 AGCCATAATGCTTTTTCTTAGGGAA 59.042 36.000 0.00 0.00 38.85 3.97
700 701 6.097412 AGCCATAATGCTTTTTCTTAGGGAAG 59.903 38.462 0.00 0.00 38.85 3.46
711 712 4.755266 TCTTAGGGAAGAACATAGCCAC 57.245 45.455 0.00 0.00 38.80 5.01
797 802 3.181510 CGGCCACAAACTAAGTCATTAGC 60.182 47.826 2.24 0.00 41.91 3.09
798 803 3.181510 GGCCACAAACTAAGTCATTAGCG 60.182 47.826 0.00 0.00 41.91 4.26
799 804 3.435671 GCCACAAACTAAGTCATTAGCGT 59.564 43.478 0.00 0.00 41.91 5.07
800 805 4.669197 GCCACAAACTAAGTCATTAGCGTG 60.669 45.833 0.00 0.00 41.91 5.34
801 806 4.142902 CCACAAACTAAGTCATTAGCGTGG 60.143 45.833 13.16 13.16 43.43 4.94
802 807 4.000988 ACAAACTAAGTCATTAGCGTGGG 58.999 43.478 0.00 0.00 41.91 4.61
803 808 2.311124 ACTAAGTCATTAGCGTGGGC 57.689 50.000 0.00 0.00 41.91 5.36
831 836 2.297195 TGCGTACGTGCACGACTTG 61.297 57.895 42.94 28.04 44.69 3.16
879 887 0.248134 GACTCGATCGTTAGCGCACT 60.248 55.000 15.94 0.00 38.14 4.40
929 937 2.029649 GCTGCTTCCATTTGCTTCTTCA 60.030 45.455 0.00 0.00 0.00 3.02
992 1000 2.033194 CCCGAAGAAACGCTGGGAC 61.033 63.158 0.00 0.00 42.77 4.46
1281 1289 3.745803 GACGCCCTCGACGACCTT 61.746 66.667 0.52 0.00 39.41 3.50
1332 1340 3.399181 GGTGCTGATCCCGGGTCA 61.399 66.667 22.86 21.24 0.00 4.02
1334 1342 1.745489 GTGCTGATCCCGGGTCAAC 60.745 63.158 22.86 18.19 0.00 3.18
1401 1409 0.392998 CACGCAGCCCTATGAGGTTT 60.393 55.000 0.00 0.00 31.93 3.27
1405 1413 2.171003 GCAGCCCTATGAGGTTTTTGT 58.829 47.619 0.00 0.00 31.93 2.83
1446 1460 0.176680 CCGCTTCATCTACTGGCAGT 59.823 55.000 25.34 25.34 0.00 4.40
1447 1461 1.284657 CGCTTCATCTACTGGCAGTG 58.715 55.000 29.65 18.63 0.00 3.66
1448 1462 1.404717 CGCTTCATCTACTGGCAGTGT 60.405 52.381 29.65 12.82 0.00 3.55
1449 1463 2.275318 GCTTCATCTACTGGCAGTGTC 58.725 52.381 29.65 6.05 0.00 3.67
1450 1464 2.354103 GCTTCATCTACTGGCAGTGTCA 60.354 50.000 29.65 13.41 0.00 3.58
1451 1465 3.519579 CTTCATCTACTGGCAGTGTCAG 58.480 50.000 29.65 23.08 41.54 3.51
1563 1577 2.657237 GCCTACAGGTGCACGTCT 59.343 61.111 9.53 0.00 37.57 4.18
1565 1579 0.458025 GCCTACAGGTGCACGTCTAC 60.458 60.000 9.53 0.00 37.57 2.59
1690 1704 0.895530 GGTGGACCAGATCGTGAAGA 59.104 55.000 0.00 0.00 35.64 2.87
1773 1787 2.843545 GAGGGGGTTGGCAAGACA 59.156 61.111 0.00 0.00 0.00 3.41
1896 1910 2.195153 TGGTCCAGATGATCCATCCA 57.805 50.000 3.55 0.00 41.36 3.41
1983 1997 1.016653 GCAAGAGGTTCCTGCTCGTC 61.017 60.000 0.00 0.00 0.00 4.20
2151 2165 1.071385 GGTCCTCTGGCATTCGATGAT 59.929 52.381 0.00 0.00 0.00 2.45
2176 2190 3.760151 CTGGAGGATGTTCAAGCATTTCA 59.240 43.478 0.00 0.00 0.00 2.69
2197 2211 1.551430 CATTTGGGGCTGCAGATGAAA 59.449 47.619 20.43 10.25 0.00 2.69
2199 2213 0.112995 TTGGGGCTGCAGATGAAACT 59.887 50.000 20.43 0.00 0.00 2.66
2210 2224 4.993584 TGCAGATGAAACTGAAGAAGACTC 59.006 41.667 0.00 0.00 39.94 3.36
2216 2230 4.405680 TGAAACTGAAGAAGACTCCACTCA 59.594 41.667 0.00 0.00 0.00 3.41
2218 2232 2.896685 ACTGAAGAAGACTCCACTCAGG 59.103 50.000 0.00 0.00 39.47 3.86
2220 2234 4.082845 CTGAAGAAGACTCCACTCAGGTA 58.917 47.826 0.00 0.00 39.02 3.08
2241 2255 0.544357 TGGATGAGTGGGACGACCTT 60.544 55.000 3.44 0.00 41.11 3.50
2266 2280 3.141838 AGAGGATGAGGAGGAGCTATCAA 59.858 47.826 0.00 0.00 0.00 2.57
2280 2294 5.052693 AGCTATCAACCATGGAGCAAATA 57.947 39.130 21.47 7.68 37.98 1.40
2301 2315 1.522668 CACACGAGATGGCCAAGAAA 58.477 50.000 10.96 0.00 0.00 2.52
2361 2375 1.684734 ACTGTACTTCCGGCGGGAT 60.685 57.895 27.98 14.27 43.41 3.85
2415 2429 3.933048 CTTGTGGCAGCAGGGGGAG 62.933 68.421 0.00 0.00 0.00 4.30
2421 2435 4.851252 CAGCAGGGGGAGGGGGAT 62.851 72.222 0.00 0.00 0.00 3.85
2457 2471 1.828768 GGCACTCTGGCTGAGCTAT 59.171 57.895 19.84 0.00 46.41 2.97
2472 2486 0.676184 GCTATCAGCACCTCGATCCA 59.324 55.000 0.00 0.00 41.89 3.41
2491 2505 0.463654 ACGCCTCAAGCAGTGTTTCA 60.464 50.000 0.00 0.00 44.04 2.69
2634 2648 2.395654 GAGTTCTTCGACGAGCTTGTT 58.604 47.619 8.34 0.00 0.00 2.83
2686 2700 1.992667 ACAGATACGTCATGCACAACG 59.007 47.619 18.21 18.21 44.22 4.10
2714 2728 0.605589 AAGCTAGCACGAGCAGTCTT 59.394 50.000 18.83 3.83 45.43 3.01
2721 2735 1.178276 CACGAGCAGTCTTAGGGAGT 58.822 55.000 0.00 0.00 0.00 3.85
2726 2740 2.425668 GAGCAGTCTTAGGGAGTCAGTC 59.574 54.545 0.00 0.00 0.00 3.51
2728 2742 2.829120 GCAGTCTTAGGGAGTCAGTCTT 59.171 50.000 0.00 0.00 0.00 3.01
2865 2879 0.620556 ATCACCATTTCCTCCAGCGT 59.379 50.000 0.00 0.00 0.00 5.07
3039 3053 2.024655 ACACCTCCGGTATCTCAACCTA 60.025 50.000 0.00 0.00 37.39 3.08
3183 3197 3.465296 GAGGCATCTGCGTGCATGC 62.465 63.158 24.20 24.20 46.81 4.06
3420 3434 2.061773 CTGAGCAAACTACACCTGTCG 58.938 52.381 0.00 0.00 0.00 4.35
3461 3478 0.238553 GGAAGCAACGAGGTTTCAGC 59.761 55.000 0.00 0.00 38.24 4.26
3462 3479 0.944386 GAAGCAACGAGGTTTCAGCA 59.056 50.000 0.00 0.00 38.24 4.41
3463 3480 0.947244 AAGCAACGAGGTTTCAGCAG 59.053 50.000 0.00 0.00 33.25 4.24
3689 3706 3.478509 AGATCAAGAGGATGCATTCTGC 58.521 45.455 13.71 4.26 45.29 4.26
3766 3783 1.127701 GCTCATCATCGAAGACGCTC 58.872 55.000 0.00 0.00 42.51 5.03
3767 3784 1.534805 GCTCATCATCGAAGACGCTCA 60.535 52.381 0.00 0.00 42.51 4.26
3816 3833 4.380531 ACTCGACAAGACACATGTCATTT 58.619 39.130 14.23 0.00 45.90 2.32
3838 3855 2.350514 GCCTCTGCAAGCTGGAGT 59.649 61.111 0.00 0.00 37.12 3.85
3873 3890 1.893786 CCTGACGACCTTCCCAGAG 59.106 63.158 0.00 0.00 0.00 3.35
3949 3966 1.267235 CGATGATTCACGACAAGCAGC 60.267 52.381 0.00 0.00 0.00 5.25
3993 4010 1.003580 TCAACATCAGAGGAAGGTGGC 59.996 52.381 0.00 0.00 30.54 5.01
4116 4133 1.748493 GAGGCTCTGTCGATCAAGAGT 59.252 52.381 18.38 5.52 0.00 3.24
4129 4146 0.933047 CAAGAGTTGCGACGACGTCA 60.933 55.000 26.26 7.04 41.98 4.35
4165 4182 0.250234 CGGCTTCAAGGATCTCACCA 59.750 55.000 0.00 0.00 0.00 4.17
4167 4184 1.280421 GGCTTCAAGGATCTCACCACT 59.720 52.381 0.00 0.00 0.00 4.00
4482 4499 5.394005 CCATTCTCTTGAGACACTCGAGATT 60.394 44.000 21.68 4.63 46.25 2.40
4524 4541 1.080025 CGACGGTTCCTGGGAGTTC 60.080 63.158 0.00 0.00 0.00 3.01
4647 4664 1.523938 GGACAACTGCCCGGCTATC 60.524 63.158 11.61 1.01 0.00 2.08
4690 4707 4.421479 CGGCGTCGCTGAAGAGGT 62.421 66.667 21.63 0.00 37.02 3.85
4692 4709 1.214589 GGCGTCGCTGAAGAGGTTA 59.785 57.895 18.11 0.00 0.00 2.85
4703 4720 5.486526 GCTGAAGAGGTTATCCATATCCAG 58.513 45.833 0.00 0.00 35.89 3.86
4713 4730 0.839277 CCATATCCAGGTGCAGTCCA 59.161 55.000 0.00 0.00 0.00 4.02
4722 4739 0.035630 GGTGCAGTCCAGAGCTGATT 60.036 55.000 0.00 0.00 36.12 2.57
4764 4781 1.605710 CTTGATAGGCCCAAGATTGCG 59.394 52.381 13.33 0.00 42.57 4.85
4793 4810 3.241701 GTGTTGTTTACATTGATGGGCG 58.758 45.455 0.00 0.00 39.39 6.13
4911 5055 5.989477 TCCATCTGAATCGTATGAAACCTT 58.011 37.500 0.00 0.00 0.00 3.50
4916 5063 9.655769 CATCTGAATCGTATGAAACCTTTATTG 57.344 33.333 0.00 0.00 0.00 1.90
4917 5064 7.693952 TCTGAATCGTATGAAACCTTTATTGC 58.306 34.615 0.00 0.00 0.00 3.56
4918 5065 6.482835 TGAATCGTATGAAACCTTTATTGCG 58.517 36.000 0.00 0.00 0.00 4.85
4919 5066 4.868450 TCGTATGAAACCTTTATTGCGG 57.132 40.909 0.00 0.00 0.00 5.69
4920 5067 4.505808 TCGTATGAAACCTTTATTGCGGA 58.494 39.130 0.00 0.00 0.00 5.54
4921 5068 4.330620 TCGTATGAAACCTTTATTGCGGAC 59.669 41.667 0.00 0.00 0.00 4.79
4922 5069 4.331717 CGTATGAAACCTTTATTGCGGACT 59.668 41.667 0.00 0.00 0.00 3.85
4923 5070 4.965119 ATGAAACCTTTATTGCGGACTC 57.035 40.909 0.00 0.00 0.00 3.36
4925 5072 5.155278 TGAAACCTTTATTGCGGACTCTA 57.845 39.130 0.00 0.00 0.00 2.43
4926 5073 4.933400 TGAAACCTTTATTGCGGACTCTAC 59.067 41.667 0.00 0.00 0.00 2.59
4933 5083 1.334160 TTGCGGACTCTACTGTTGGA 58.666 50.000 0.00 0.00 0.00 3.53
4977 5189 2.237392 GGTACCTGCAATCAACTCTCCT 59.763 50.000 4.06 0.00 0.00 3.69
4980 5192 1.407989 CCTGCAATCAACTCTCCTCCC 60.408 57.143 0.00 0.00 0.00 4.30
4982 5194 1.704628 TGCAATCAACTCTCCTCCCAA 59.295 47.619 0.00 0.00 0.00 4.12
4992 5204 4.029809 CCTCCCAACCCCGTGTCC 62.030 72.222 0.00 0.00 0.00 4.02
4993 5205 4.029809 CTCCCAACCCCGTGTCCC 62.030 72.222 0.00 0.00 0.00 4.46
4994 5206 4.585216 TCCCAACCCCGTGTCCCT 62.585 66.667 0.00 0.00 0.00 4.20
4995 5207 4.029809 CCCAACCCCGTGTCCCTC 62.030 72.222 0.00 0.00 0.00 4.30
4996 5208 4.029809 CCAACCCCGTGTCCCTCC 62.030 72.222 0.00 0.00 0.00 4.30
4997 5209 4.388499 CAACCCCGTGTCCCTCCG 62.388 72.222 0.00 0.00 0.00 4.63
5141 5430 3.971702 GCCTTGGTCCCTGCTGGT 61.972 66.667 9.00 0.00 34.77 4.00
5289 5578 8.566260 CCTTTCCATTAATTTTGCAATCAACAA 58.434 29.630 0.00 0.00 30.75 2.83
5329 5620 8.970020 TGGTTTCAAATTATGTATCAAGCATCT 58.030 29.630 0.00 0.00 0.00 2.90
5447 5741 1.919918 CAGGACGATCTGCAGTCTTC 58.080 55.000 14.67 12.78 37.52 2.87
5448 5742 1.203287 CAGGACGATCTGCAGTCTTCA 59.797 52.381 14.67 0.00 37.52 3.02
5449 5743 1.476085 AGGACGATCTGCAGTCTTCAG 59.524 52.381 14.67 8.46 37.52 3.02
5450 5744 1.470632 GGACGATCTGCAGTCTTCAGG 60.471 57.143 14.67 0.22 37.52 3.86
5451 5745 1.203523 GACGATCTGCAGTCTTCAGGT 59.796 52.381 14.67 3.49 34.74 4.00
5452 5746 1.203523 ACGATCTGCAGTCTTCAGGTC 59.796 52.381 14.67 2.89 38.11 3.85
5453 5747 1.203287 CGATCTGCAGTCTTCAGGTCA 59.797 52.381 14.67 0.00 40.72 4.02
5454 5748 2.159128 CGATCTGCAGTCTTCAGGTCAT 60.159 50.000 14.67 0.00 40.72 3.06
5455 5749 2.756840 TCTGCAGTCTTCAGGTCATG 57.243 50.000 14.67 0.00 32.63 3.07
5456 5750 2.250924 TCTGCAGTCTTCAGGTCATGA 58.749 47.619 14.67 0.00 35.62 3.07
5457 5751 2.233186 TCTGCAGTCTTCAGGTCATGAG 59.767 50.000 14.67 0.00 39.68 2.90
5458 5752 1.338484 TGCAGTCTTCAGGTCATGAGC 60.338 52.381 17.19 17.19 39.68 4.26
5459 5753 2.011046 GCAGTCTTCAGGTCATGAGCC 61.011 57.143 20.92 12.97 39.68 4.70
5460 5754 1.554160 CAGTCTTCAGGTCATGAGCCT 59.446 52.381 20.92 14.95 39.68 4.58
5469 5763 0.037326 GTCATGAGCCTGAACGGACA 60.037 55.000 0.00 0.00 33.16 4.02
5470 5764 0.904649 TCATGAGCCTGAACGGACAT 59.095 50.000 0.00 0.00 33.68 3.06
5507 5801 5.236478 CGAAAACCTGATGACACTTACAAGT 59.764 40.000 0.00 0.00 40.60 3.16
5586 5886 1.272313 ACTAGGCGAACCACTACCAGA 60.272 52.381 0.00 0.00 39.06 3.86
5721 6021 2.203788 TGCCACGAGGGAAGGACT 60.204 61.111 0.00 0.00 40.01 3.85
5733 6033 2.731691 GAAGGACTTGTCCGCCAGCA 62.732 60.000 13.41 0.00 34.28 4.41
5763 6063 2.755650 CGTGTGCTAACCTCTTCACTT 58.244 47.619 0.00 0.00 0.00 3.16
5785 6085 3.117888 TCAGCTTGGAACTTCACCTTCTT 60.118 43.478 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.723348 GGTGCCTCCGCGTTCAAC 61.723 66.667 4.92 0.00 38.08 3.18
9 10 2.033194 CCGAAAGAACGGTGCCTCC 61.033 63.158 0.00 0.00 46.70 4.30
10 11 3.562635 CCGAAAGAACGGTGCCTC 58.437 61.111 0.00 0.00 46.70 4.70
17 18 2.279136 CGATCTAAGCACCGAAAGAACG 59.721 50.000 0.00 0.00 0.00 3.95
18 19 2.603560 CCGATCTAAGCACCGAAAGAAC 59.396 50.000 0.00 0.00 0.00 3.01
19 20 2.494471 TCCGATCTAAGCACCGAAAGAA 59.506 45.455 0.00 0.00 0.00 2.52
20 21 2.097036 TCCGATCTAAGCACCGAAAGA 58.903 47.619 0.00 0.00 0.00 2.52
21 22 2.579207 TCCGATCTAAGCACCGAAAG 57.421 50.000 0.00 0.00 0.00 2.62
22 23 3.118920 TGATTCCGATCTAAGCACCGAAA 60.119 43.478 0.00 0.00 33.28 3.46
23 24 2.429250 TGATTCCGATCTAAGCACCGAA 59.571 45.455 0.00 0.00 33.28 4.30
24 25 2.028876 TGATTCCGATCTAAGCACCGA 58.971 47.619 0.00 0.00 33.28 4.69
25 26 2.509052 TGATTCCGATCTAAGCACCG 57.491 50.000 0.00 0.00 33.28 4.94
26 27 2.872858 GGTTGATTCCGATCTAAGCACC 59.127 50.000 0.00 0.00 33.28 5.01
38 39 1.651987 TTCAGATCGCGGTTGATTCC 58.348 50.000 6.13 0.00 0.00 3.01
39 40 3.511856 GATTCAGATCGCGGTTGATTC 57.488 47.619 6.13 9.87 0.00 2.52
49 50 9.896582 GAGTCATACTCGTAGCGATTCAGATCG 62.897 48.148 4.55 4.55 44.99 3.69
50 51 5.083389 GTCATACTCGTAGCGATTCAGATC 58.917 45.833 0.00 0.00 34.61 2.75
51 52 4.757657 AGTCATACTCGTAGCGATTCAGAT 59.242 41.667 0.00 0.00 34.61 2.90
52 53 4.127907 AGTCATACTCGTAGCGATTCAGA 58.872 43.478 0.00 0.00 34.61 3.27
53 54 4.459606 GAGTCATACTCGTAGCGATTCAG 58.540 47.826 0.00 0.00 35.28 3.02
54 55 3.250280 GGAGTCATACTCGTAGCGATTCA 59.750 47.826 1.23 0.00 45.96 2.57
55 56 3.365164 GGGAGTCATACTCGTAGCGATTC 60.365 52.174 1.23 0.00 45.96 2.52
56 57 2.553172 GGGAGTCATACTCGTAGCGATT 59.447 50.000 1.23 0.00 45.96 3.34
57 58 2.152830 GGGAGTCATACTCGTAGCGAT 58.847 52.381 1.23 0.00 45.96 4.58
58 59 1.140452 AGGGAGTCATACTCGTAGCGA 59.860 52.381 1.23 0.00 45.96 4.93
59 60 1.532007 GAGGGAGTCATACTCGTAGCG 59.468 57.143 1.23 0.00 45.96 4.26
60 61 2.573369 TGAGGGAGTCATACTCGTAGC 58.427 52.381 1.23 0.00 45.96 3.58
61 62 3.754323 GGATGAGGGAGTCATACTCGTAG 59.246 52.174 1.23 0.00 46.64 3.51
62 63 3.752665 GGATGAGGGAGTCATACTCGTA 58.247 50.000 1.23 0.00 46.64 3.43
63 64 2.588620 GGATGAGGGAGTCATACTCGT 58.411 52.381 1.23 3.87 46.64 4.18
64 65 1.537638 CGGATGAGGGAGTCATACTCG 59.462 57.143 1.23 0.00 46.64 4.18
65 66 1.271102 GCGGATGAGGGAGTCATACTC 59.729 57.143 0.00 0.00 46.64 2.59
66 67 1.333177 GCGGATGAGGGAGTCATACT 58.667 55.000 0.00 0.00 46.64 2.12
67 68 0.039074 CGCGGATGAGGGAGTCATAC 60.039 60.000 0.00 0.00 46.64 2.39
68 69 0.467474 ACGCGGATGAGGGAGTCATA 60.467 55.000 12.47 0.00 46.64 2.15
70 71 1.945354 GAACGCGGATGAGGGAGTCA 61.945 60.000 12.47 0.00 40.38 3.41
71 72 1.227002 GAACGCGGATGAGGGAGTC 60.227 63.158 12.47 0.00 0.00 3.36
72 73 1.258445 AAGAACGCGGATGAGGGAGT 61.258 55.000 12.47 0.00 0.00 3.85
73 74 0.807667 CAAGAACGCGGATGAGGGAG 60.808 60.000 12.47 0.00 0.00 4.30
74 75 1.218047 CAAGAACGCGGATGAGGGA 59.782 57.895 12.47 0.00 0.00 4.20
75 76 2.464459 GCAAGAACGCGGATGAGGG 61.464 63.158 12.47 0.00 0.00 4.30
76 77 1.298157 TTGCAAGAACGCGGATGAGG 61.298 55.000 12.47 0.00 33.35 3.86
77 78 0.179215 GTTGCAAGAACGCGGATGAG 60.179 55.000 12.47 0.00 33.35 2.90
78 79 1.866237 GTTGCAAGAACGCGGATGA 59.134 52.632 12.47 0.00 33.35 2.92
79 80 1.509787 CGTTGCAAGAACGCGGATG 60.510 57.895 12.47 4.60 36.82 3.51
80 81 2.860293 CGTTGCAAGAACGCGGAT 59.140 55.556 12.47 0.00 36.82 4.18
85 86 1.438710 CGGAAGCGTTGCAAGAACG 60.439 57.895 0.00 1.25 45.56 3.95
86 87 4.515107 CGGAAGCGTTGCAAGAAC 57.485 55.556 0.00 0.00 0.00 3.01
103 104 0.249489 ACCCTTGTAGATCGCGATGC 60.249 55.000 29.09 17.53 0.00 3.91
104 105 3.245797 CATACCCTTGTAGATCGCGATG 58.754 50.000 29.09 11.88 0.00 3.84
105 106 2.891580 ACATACCCTTGTAGATCGCGAT 59.108 45.455 23.97 23.97 0.00 4.58
106 107 2.304092 ACATACCCTTGTAGATCGCGA 58.696 47.619 13.09 13.09 0.00 5.87
107 108 2.795175 ACATACCCTTGTAGATCGCG 57.205 50.000 0.00 0.00 0.00 5.87
113 114 5.509840 GGAGTGCATCTACATACCCTTGTAG 60.510 48.000 5.47 5.47 46.85 2.74
114 115 4.344102 GGAGTGCATCTACATACCCTTGTA 59.656 45.833 0.00 0.00 0.00 2.41
115 116 3.134804 GGAGTGCATCTACATACCCTTGT 59.865 47.826 0.00 0.00 0.00 3.16
116 117 3.495100 GGGAGTGCATCTACATACCCTTG 60.495 52.174 0.00 0.00 35.93 3.61
117 118 2.706190 GGGAGTGCATCTACATACCCTT 59.294 50.000 0.00 0.00 35.93 3.95
118 119 2.330216 GGGAGTGCATCTACATACCCT 58.670 52.381 0.00 0.00 35.93 4.34
119 120 1.348036 GGGGAGTGCATCTACATACCC 59.652 57.143 0.00 0.00 37.17 3.69
120 121 2.330216 AGGGGAGTGCATCTACATACC 58.670 52.381 0.00 0.00 0.00 2.73
121 122 3.244249 GGAAGGGGAGTGCATCTACATAC 60.244 52.174 0.00 0.00 0.00 2.39
122 123 2.972713 GGAAGGGGAGTGCATCTACATA 59.027 50.000 0.00 0.00 0.00 2.29
123 124 1.771255 GGAAGGGGAGTGCATCTACAT 59.229 52.381 0.00 0.00 0.00 2.29
124 125 1.204146 GGAAGGGGAGTGCATCTACA 58.796 55.000 0.00 0.00 0.00 2.74
125 126 0.470341 GGGAAGGGGAGTGCATCTAC 59.530 60.000 0.00 0.00 0.00 2.59
126 127 0.694444 GGGGAAGGGGAGTGCATCTA 60.694 60.000 0.00 0.00 0.00 1.98
127 128 2.003548 GGGGAAGGGGAGTGCATCT 61.004 63.158 0.00 0.00 0.00 2.90
128 129 1.988982 GAGGGGAAGGGGAGTGCATC 61.989 65.000 0.00 0.00 0.00 3.91
129 130 2.003548 GAGGGGAAGGGGAGTGCAT 61.004 63.158 0.00 0.00 0.00 3.96
130 131 2.610859 GAGGGGAAGGGGAGTGCA 60.611 66.667 0.00 0.00 0.00 4.57
131 132 3.787001 CGAGGGGAAGGGGAGTGC 61.787 72.222 0.00 0.00 0.00 4.40
132 133 1.918800 AACGAGGGGAAGGGGAGTG 60.919 63.158 0.00 0.00 0.00 3.51
133 134 1.918800 CAACGAGGGGAAGGGGAGT 60.919 63.158 0.00 0.00 0.00 3.85
134 135 2.990479 CAACGAGGGGAAGGGGAG 59.010 66.667 0.00 0.00 0.00 4.30
135 136 2.465010 TAGCAACGAGGGGAAGGGGA 62.465 60.000 0.00 0.00 0.00 4.81
136 137 1.972660 CTAGCAACGAGGGGAAGGGG 61.973 65.000 0.00 0.00 0.00 4.79
137 138 0.976073 TCTAGCAACGAGGGGAAGGG 60.976 60.000 0.00 0.00 0.00 3.95
138 139 1.123928 ATCTAGCAACGAGGGGAAGG 58.876 55.000 0.00 0.00 0.00 3.46
139 140 2.990066 AATCTAGCAACGAGGGGAAG 57.010 50.000 0.00 0.00 0.00 3.46
140 141 3.371965 AGTAATCTAGCAACGAGGGGAA 58.628 45.455 0.00 0.00 0.00 3.97
141 142 2.957006 GAGTAATCTAGCAACGAGGGGA 59.043 50.000 0.00 0.00 0.00 4.81
142 143 2.036089 GGAGTAATCTAGCAACGAGGGG 59.964 54.545 0.00 0.00 0.00 4.79
143 144 2.693591 TGGAGTAATCTAGCAACGAGGG 59.306 50.000 0.00 0.00 0.00 4.30
144 145 4.592485 ATGGAGTAATCTAGCAACGAGG 57.408 45.455 0.00 0.00 0.00 4.63
145 146 6.561737 TCTATGGAGTAATCTAGCAACGAG 57.438 41.667 0.00 0.00 0.00 4.18
146 147 7.230712 TCAATCTATGGAGTAATCTAGCAACGA 59.769 37.037 0.00 0.00 0.00 3.85
147 148 7.371159 TCAATCTATGGAGTAATCTAGCAACG 58.629 38.462 0.00 0.00 0.00 4.10
148 149 9.364989 GATCAATCTATGGAGTAATCTAGCAAC 57.635 37.037 0.00 0.00 0.00 4.17
149 150 9.319060 AGATCAATCTATGGAGTAATCTAGCAA 57.681 33.333 0.00 0.00 34.85 3.91
150 151 8.891985 AGATCAATCTATGGAGTAATCTAGCA 57.108 34.615 0.00 0.00 34.85 3.49
151 152 9.585099 CAAGATCAATCTATGGAGTAATCTAGC 57.415 37.037 0.00 0.00 35.76 3.42
153 154 9.607333 ACCAAGATCAATCTATGGAGTAATCTA 57.393 33.333 19.34 0.00 37.92 1.98
154 155 8.373981 CACCAAGATCAATCTATGGAGTAATCT 58.626 37.037 19.34 0.00 37.92 2.40
155 156 8.370940 TCACCAAGATCAATCTATGGAGTAATC 58.629 37.037 19.34 0.00 37.92 1.75
156 157 8.153550 GTCACCAAGATCAATCTATGGAGTAAT 58.846 37.037 19.34 3.63 37.92 1.89
157 158 7.500992 GTCACCAAGATCAATCTATGGAGTAA 58.499 38.462 19.34 6.75 37.92 2.24
158 159 6.239036 CGTCACCAAGATCAATCTATGGAGTA 60.239 42.308 19.34 8.26 37.92 2.59
159 160 5.452496 CGTCACCAAGATCAATCTATGGAGT 60.452 44.000 19.34 4.58 37.92 3.85
160 161 4.987285 CGTCACCAAGATCAATCTATGGAG 59.013 45.833 19.34 14.57 37.92 3.86
161 162 4.740634 GCGTCACCAAGATCAATCTATGGA 60.741 45.833 19.34 4.74 37.92 3.41
162 163 3.496130 GCGTCACCAAGATCAATCTATGG 59.504 47.826 14.46 14.46 39.18 2.74
163 164 3.183172 CGCGTCACCAAGATCAATCTATG 59.817 47.826 0.00 0.00 35.76 2.23
164 165 3.181475 ACGCGTCACCAAGATCAATCTAT 60.181 43.478 5.58 0.00 35.76 1.98
165 166 2.165641 ACGCGTCACCAAGATCAATCTA 59.834 45.455 5.58 0.00 35.76 1.98
166 167 1.066858 ACGCGTCACCAAGATCAATCT 60.067 47.619 5.58 0.00 39.22 2.40
167 168 1.359848 ACGCGTCACCAAGATCAATC 58.640 50.000 5.58 0.00 0.00 2.67
168 169 2.165641 TCTACGCGTCACCAAGATCAAT 59.834 45.455 18.63 0.00 0.00 2.57
169 170 1.542472 TCTACGCGTCACCAAGATCAA 59.458 47.619 18.63 0.00 0.00 2.57
170 171 1.170442 TCTACGCGTCACCAAGATCA 58.830 50.000 18.63 0.00 0.00 2.92
171 172 2.273370 TTCTACGCGTCACCAAGATC 57.727 50.000 18.63 0.00 0.00 2.75
172 173 2.736144 TTTCTACGCGTCACCAAGAT 57.264 45.000 18.63 0.00 0.00 2.40
173 174 2.512485 TTTTCTACGCGTCACCAAGA 57.488 45.000 18.63 10.33 0.00 3.02
174 175 3.806316 AATTTTCTACGCGTCACCAAG 57.194 42.857 18.63 7.47 0.00 3.61
175 176 4.035324 TCAAAATTTTCTACGCGTCACCAA 59.965 37.500 18.63 5.57 0.00 3.67
176 177 3.560481 TCAAAATTTTCTACGCGTCACCA 59.440 39.130 18.63 0.00 0.00 4.17
177 178 4.136517 TCAAAATTTTCTACGCGTCACC 57.863 40.909 18.63 0.00 0.00 4.02
178 179 6.669485 AATTCAAAATTTTCTACGCGTCAC 57.331 33.333 18.63 0.00 0.00 3.67
179 180 7.112844 CAGAAATTCAAAATTTTCTACGCGTCA 59.887 33.333 18.63 0.00 39.53 4.35
180 181 7.429284 CAGAAATTCAAAATTTTCTACGCGTC 58.571 34.615 18.63 0.00 39.53 5.19
181 182 6.129194 GCAGAAATTCAAAATTTTCTACGCGT 60.129 34.615 19.17 19.17 39.53 6.01
182 183 6.088085 AGCAGAAATTCAAAATTTTCTACGCG 59.912 34.615 3.53 3.53 39.53 6.01
183 184 7.338440 AGCAGAAATTCAAAATTTTCTACGC 57.662 32.000 0.00 0.00 39.53 4.42
184 185 8.567221 CGTAGCAGAAATTCAAAATTTTCTACG 58.433 33.333 19.51 19.51 39.53 3.51
185 186 9.394477 ACGTAGCAGAAATTCAAAATTTTCTAC 57.606 29.630 0.00 5.68 39.53 2.59
186 187 9.959749 AACGTAGCAGAAATTCAAAATTTTCTA 57.040 25.926 0.00 0.00 39.53 2.10
187 188 8.871686 AACGTAGCAGAAATTCAAAATTTTCT 57.128 26.923 0.00 0.00 41.61 2.52
188 189 8.214472 GGAACGTAGCAGAAATTCAAAATTTTC 58.786 33.333 0.00 0.00 33.08 2.29
189 190 7.170828 GGGAACGTAGCAGAAATTCAAAATTTT 59.829 33.333 0.00 0.00 0.00 1.82
190 191 6.645003 GGGAACGTAGCAGAAATTCAAAATTT 59.355 34.615 0.00 0.00 0.00 1.82
191 192 6.156519 GGGAACGTAGCAGAAATTCAAAATT 58.843 36.000 0.00 0.00 0.00 1.82
192 193 5.336451 GGGGAACGTAGCAGAAATTCAAAAT 60.336 40.000 0.00 0.00 0.00 1.82
193 194 4.022676 GGGGAACGTAGCAGAAATTCAAAA 60.023 41.667 0.00 0.00 0.00 2.44
194 195 3.504520 GGGGAACGTAGCAGAAATTCAAA 59.495 43.478 0.00 0.00 0.00 2.69
195 196 3.078837 GGGGAACGTAGCAGAAATTCAA 58.921 45.455 0.00 0.00 0.00 2.69
196 197 2.039216 TGGGGAACGTAGCAGAAATTCA 59.961 45.455 0.00 0.00 0.00 2.57
197 198 2.706890 TGGGGAACGTAGCAGAAATTC 58.293 47.619 0.00 0.00 0.00 2.17
198 199 2.817844 GTTGGGGAACGTAGCAGAAATT 59.182 45.455 0.00 0.00 0.00 1.82
199 200 2.224670 TGTTGGGGAACGTAGCAGAAAT 60.225 45.455 0.00 0.00 0.00 2.17
200 201 1.141254 TGTTGGGGAACGTAGCAGAAA 59.859 47.619 0.00 0.00 0.00 2.52
201 202 0.759959 TGTTGGGGAACGTAGCAGAA 59.240 50.000 0.00 0.00 0.00 3.02
202 203 0.320374 CTGTTGGGGAACGTAGCAGA 59.680 55.000 0.00 0.00 31.30 4.26
203 204 0.673644 CCTGTTGGGGAACGTAGCAG 60.674 60.000 0.00 0.00 0.00 4.24
204 205 1.122632 TCCTGTTGGGGAACGTAGCA 61.123 55.000 0.00 0.00 35.33 3.49
205 206 0.035739 TTCCTGTTGGGGAACGTAGC 59.964 55.000 0.00 0.00 40.08 3.58
206 207 1.338769 CCTTCCTGTTGGGGAACGTAG 60.339 57.143 0.00 0.00 40.08 3.51
207 208 0.688487 CCTTCCTGTTGGGGAACGTA 59.312 55.000 0.00 0.00 40.08 3.57
208 209 1.057851 TCCTTCCTGTTGGGGAACGT 61.058 55.000 0.00 0.00 40.08 3.99
209 210 0.321653 CTCCTTCCTGTTGGGGAACG 60.322 60.000 0.00 0.00 40.08 3.95
210 211 1.003696 CTCTCCTTCCTGTTGGGGAAC 59.996 57.143 0.00 0.00 40.08 3.62
211 212 1.362224 CTCTCCTTCCTGTTGGGGAA 58.638 55.000 0.00 0.00 42.39 3.97
212 213 0.547712 CCTCTCCTTCCTGTTGGGGA 60.548 60.000 0.00 0.00 35.33 4.81
213 214 1.566298 CCCTCTCCTTCCTGTTGGGG 61.566 65.000 0.00 0.00 35.33 4.96
214 215 1.566298 CCCCTCTCCTTCCTGTTGGG 61.566 65.000 0.00 0.00 0.00 4.12
215 216 1.566298 CCCCCTCTCCTTCCTGTTGG 61.566 65.000 0.00 0.00 0.00 3.77
216 217 1.994463 CCCCCTCTCCTTCCTGTTG 59.006 63.158 0.00 0.00 0.00 3.33
217 218 4.589569 CCCCCTCTCCTTCCTGTT 57.410 61.111 0.00 0.00 0.00 3.16
233 234 3.584403 GCATGATCCCCCTCCCCC 61.584 72.222 0.00 0.00 0.00 5.40
234 235 2.778278 TGCATGATCCCCCTCCCC 60.778 66.667 0.00 0.00 0.00 4.81
235 236 0.768221 TACTGCATGATCCCCCTCCC 60.768 60.000 0.00 0.00 0.00 4.30
236 237 1.004044 CATACTGCATGATCCCCCTCC 59.996 57.143 0.00 0.00 36.69 4.30
237 238 1.612726 GCATACTGCATGATCCCCCTC 60.613 57.143 0.00 0.00 44.26 4.30
238 239 0.403271 GCATACTGCATGATCCCCCT 59.597 55.000 0.00 0.00 44.26 4.79
239 240 2.952714 GCATACTGCATGATCCCCC 58.047 57.895 0.00 0.00 44.26 5.40
249 250 1.376609 CCGAGTTTGGGGCATACTGC 61.377 60.000 0.00 0.00 44.08 4.40
250 251 0.035439 ACCGAGTTTGGGGCATACTG 60.035 55.000 0.00 0.00 0.00 2.74
251 252 1.208776 GTACCGAGTTTGGGGCATACT 59.791 52.381 0.00 0.00 0.00 2.12
252 253 1.208776 AGTACCGAGTTTGGGGCATAC 59.791 52.381 0.00 0.00 0.00 2.39
253 254 1.575419 AGTACCGAGTTTGGGGCATA 58.425 50.000 0.00 0.00 0.00 3.14
254 255 0.696501 AAGTACCGAGTTTGGGGCAT 59.303 50.000 0.00 0.00 0.00 4.40
255 256 0.035739 GAAGTACCGAGTTTGGGGCA 59.964 55.000 0.00 0.00 0.00 5.36
256 257 1.017701 CGAAGTACCGAGTTTGGGGC 61.018 60.000 0.00 0.00 0.00 5.80
257 258 0.390735 CCGAAGTACCGAGTTTGGGG 60.391 60.000 0.00 0.00 36.27 4.96
258 259 0.319405 ACCGAAGTACCGAGTTTGGG 59.681 55.000 4.38 0.00 42.17 4.12
259 260 2.599659 GTACCGAAGTACCGAGTTTGG 58.400 52.381 0.00 0.00 42.66 3.28
269 270 4.794278 TTTGCAGATCAGTACCGAAGTA 57.206 40.909 0.00 0.00 0.00 2.24
270 271 3.678056 TTTGCAGATCAGTACCGAAGT 57.322 42.857 0.00 0.00 0.00 3.01
289 290 5.339282 GCTAGGGGAACTGGTATCTCTTTTT 60.339 44.000 0.00 0.00 0.00 1.94
290 291 4.164413 GCTAGGGGAACTGGTATCTCTTTT 59.836 45.833 0.00 0.00 0.00 2.27
291 292 3.712218 GCTAGGGGAACTGGTATCTCTTT 59.288 47.826 0.00 0.00 0.00 2.52
292 293 3.310193 GCTAGGGGAACTGGTATCTCTT 58.690 50.000 0.00 0.00 0.00 2.85
293 294 2.426561 GGCTAGGGGAACTGGTATCTCT 60.427 54.545 0.00 0.00 0.00 3.10
294 295 1.972075 GGCTAGGGGAACTGGTATCTC 59.028 57.143 0.00 0.00 0.00 2.75
295 296 1.581149 AGGCTAGGGGAACTGGTATCT 59.419 52.381 0.00 0.00 0.00 1.98
296 297 1.972075 GAGGCTAGGGGAACTGGTATC 59.028 57.143 0.00 0.00 0.00 2.24
297 298 1.294068 TGAGGCTAGGGGAACTGGTAT 59.706 52.381 0.00 0.00 0.00 2.73
298 299 0.714180 TGAGGCTAGGGGAACTGGTA 59.286 55.000 0.00 0.00 0.00 3.25
299 300 0.618968 CTGAGGCTAGGGGAACTGGT 60.619 60.000 0.00 0.00 0.00 4.00
300 301 0.325671 TCTGAGGCTAGGGGAACTGG 60.326 60.000 0.00 0.00 0.00 4.00
301 302 1.415659 CATCTGAGGCTAGGGGAACTG 59.584 57.143 0.00 0.00 0.00 3.16
302 303 1.008938 ACATCTGAGGCTAGGGGAACT 59.991 52.381 0.00 0.00 0.00 3.01
303 304 1.139853 CACATCTGAGGCTAGGGGAAC 59.860 57.143 0.00 0.00 0.00 3.62
304 305 1.273838 ACACATCTGAGGCTAGGGGAA 60.274 52.381 0.00 0.00 0.00 3.97
305 306 0.339859 ACACATCTGAGGCTAGGGGA 59.660 55.000 0.00 0.00 0.00 4.81
306 307 1.207791 AACACATCTGAGGCTAGGGG 58.792 55.000 0.00 0.00 0.00 4.79
307 308 2.103263 GGTAACACATCTGAGGCTAGGG 59.897 54.545 0.00 0.00 0.00 3.53
308 309 2.766263 TGGTAACACATCTGAGGCTAGG 59.234 50.000 0.00 0.00 46.17 3.02
320 321 9.508642 TCAAGTTAATTGTATGATGGTAACACA 57.491 29.630 0.00 0.00 45.08 3.72
321 322 9.769093 GTCAAGTTAATTGTATGATGGTAACAC 57.231 33.333 0.00 0.00 45.08 3.32
322 323 9.508642 TGTCAAGTTAATTGTATGATGGTAACA 57.491 29.630 0.00 0.00 45.86 2.41
323 324 9.988350 CTGTCAAGTTAATTGTATGATGGTAAC 57.012 33.333 0.00 0.00 40.05 2.50
324 325 9.952030 TCTGTCAAGTTAATTGTATGATGGTAA 57.048 29.630 0.00 0.00 40.05 2.85
325 326 9.952030 TTCTGTCAAGTTAATTGTATGATGGTA 57.048 29.630 0.00 0.00 40.05 3.25
326 327 8.862325 TTCTGTCAAGTTAATTGTATGATGGT 57.138 30.769 0.00 0.00 40.05 3.55
327 328 8.950210 ACTTCTGTCAAGTTAATTGTATGATGG 58.050 33.333 0.00 0.00 40.05 3.51
330 331 9.431887 GGTACTTCTGTCAAGTTAATTGTATGA 57.568 33.333 0.00 0.00 40.05 2.15
331 332 9.214957 TGGTACTTCTGTCAAGTTAATTGTATG 57.785 33.333 0.00 0.00 40.05 2.39
332 333 9.787435 TTGGTACTTCTGTCAAGTTAATTGTAT 57.213 29.630 0.00 0.00 40.05 2.29
333 334 9.616156 TTTGGTACTTCTGTCAAGTTAATTGTA 57.384 29.630 0.00 0.00 40.05 2.41
334 335 8.403236 GTTTGGTACTTCTGTCAAGTTAATTGT 58.597 33.333 0.00 0.00 40.05 2.71
335 336 8.402472 TGTTTGGTACTTCTGTCAAGTTAATTG 58.598 33.333 0.00 0.00 40.52 2.32
336 337 8.514330 TGTTTGGTACTTCTGTCAAGTTAATT 57.486 30.769 0.00 0.00 0.00 1.40
337 338 8.514330 TTGTTTGGTACTTCTGTCAAGTTAAT 57.486 30.769 0.00 0.00 0.00 1.40
338 339 7.414762 GCTTGTTTGGTACTTCTGTCAAGTTAA 60.415 37.037 0.00 0.00 35.14 2.01
339 340 6.037830 GCTTGTTTGGTACTTCTGTCAAGTTA 59.962 38.462 0.00 0.00 35.14 2.24
340 341 5.163652 GCTTGTTTGGTACTTCTGTCAAGTT 60.164 40.000 0.00 0.00 35.14 2.66
341 342 4.335594 GCTTGTTTGGTACTTCTGTCAAGT 59.664 41.667 0.00 0.00 35.14 3.16
342 343 4.261197 GGCTTGTTTGGTACTTCTGTCAAG 60.261 45.833 0.00 0.00 35.59 3.02
343 344 3.630312 GGCTTGTTTGGTACTTCTGTCAA 59.370 43.478 0.00 0.00 0.00 3.18
344 345 3.211045 GGCTTGTTTGGTACTTCTGTCA 58.789 45.455 0.00 0.00 0.00 3.58
345 346 2.552743 GGGCTTGTTTGGTACTTCTGTC 59.447 50.000 0.00 0.00 0.00 3.51
346 347 2.174854 AGGGCTTGTTTGGTACTTCTGT 59.825 45.455 0.00 0.00 0.00 3.41
347 348 2.863809 AGGGCTTGTTTGGTACTTCTG 58.136 47.619 0.00 0.00 0.00 3.02
348 349 3.595190 AAGGGCTTGTTTGGTACTTCT 57.405 42.857 0.00 0.00 0.00 2.85
349 350 4.380550 GCATAAGGGCTTGTTTGGTACTTC 60.381 45.833 0.00 0.00 0.00 3.01
350 351 3.509967 GCATAAGGGCTTGTTTGGTACTT 59.490 43.478 0.00 0.00 0.00 2.24
351 352 3.089284 GCATAAGGGCTTGTTTGGTACT 58.911 45.455 0.00 0.00 0.00 2.73
352 353 2.159435 CGCATAAGGGCTTGTTTGGTAC 60.159 50.000 0.00 0.00 0.00 3.34
353 354 2.088423 CGCATAAGGGCTTGTTTGGTA 58.912 47.619 0.00 0.00 0.00 3.25
354 355 0.887933 CGCATAAGGGCTTGTTTGGT 59.112 50.000 0.00 0.00 0.00 3.67
355 356 0.887933 ACGCATAAGGGCTTGTTTGG 59.112 50.000 0.00 0.00 0.00 3.28
356 357 2.475519 CGTACGCATAAGGGCTTGTTTG 60.476 50.000 0.52 0.00 0.00 2.93
357 358 1.735571 CGTACGCATAAGGGCTTGTTT 59.264 47.619 0.52 0.00 0.00 2.83
358 359 1.066716 TCGTACGCATAAGGGCTTGTT 60.067 47.619 11.24 0.00 0.00 2.83
359 360 0.533491 TCGTACGCATAAGGGCTTGT 59.467 50.000 11.24 0.00 0.00 3.16
360 361 1.202371 TCTCGTACGCATAAGGGCTTG 60.202 52.381 11.24 0.00 0.00 4.01
361 362 1.108776 TCTCGTACGCATAAGGGCTT 58.891 50.000 11.24 0.00 0.00 4.35
362 363 1.329256 ATCTCGTACGCATAAGGGCT 58.671 50.000 11.24 0.00 0.00 5.19
363 364 2.864968 CTATCTCGTACGCATAAGGGC 58.135 52.381 11.24 0.00 0.00 5.19
364 365 2.488545 AGCTATCTCGTACGCATAAGGG 59.511 50.000 11.24 0.00 0.00 3.95
365 366 3.833545 AGCTATCTCGTACGCATAAGG 57.166 47.619 11.24 0.19 0.00 2.69
366 367 5.325494 CCTAAGCTATCTCGTACGCATAAG 58.675 45.833 11.24 2.53 0.00 1.73
367 368 4.379186 GCCTAAGCTATCTCGTACGCATAA 60.379 45.833 11.24 0.00 35.50 1.90
368 369 3.126514 GCCTAAGCTATCTCGTACGCATA 59.873 47.826 11.24 8.35 35.50 3.14
369 370 2.095161 GCCTAAGCTATCTCGTACGCAT 60.095 50.000 11.24 7.57 35.50 4.73
370 371 1.266175 GCCTAAGCTATCTCGTACGCA 59.734 52.381 11.24 0.00 35.50 5.24
371 372 1.966422 GCCTAAGCTATCTCGTACGC 58.034 55.000 11.24 0.00 35.50 4.42
383 384 0.323302 GCTCCCTATCCAGCCTAAGC 59.677 60.000 0.00 0.00 40.32 3.09
384 385 1.622811 CAGCTCCCTATCCAGCCTAAG 59.377 57.143 0.00 0.00 36.17 2.18
385 386 1.722034 CAGCTCCCTATCCAGCCTAA 58.278 55.000 0.00 0.00 36.17 2.69
386 387 0.833834 GCAGCTCCCTATCCAGCCTA 60.834 60.000 0.00 0.00 36.17 3.93
387 388 2.146061 GCAGCTCCCTATCCAGCCT 61.146 63.158 0.00 0.00 36.17 4.58
388 389 1.776975 ATGCAGCTCCCTATCCAGCC 61.777 60.000 0.00 0.00 36.17 4.85
389 390 0.979665 TATGCAGCTCCCTATCCAGC 59.020 55.000 0.00 0.00 35.73 4.85
390 391 1.554160 CCTATGCAGCTCCCTATCCAG 59.446 57.143 0.00 0.00 0.00 3.86
391 392 1.149923 TCCTATGCAGCTCCCTATCCA 59.850 52.381 0.00 0.00 0.00 3.41
392 393 1.944177 TCCTATGCAGCTCCCTATCC 58.056 55.000 0.00 0.00 0.00 2.59
393 394 3.640967 CCTATCCTATGCAGCTCCCTATC 59.359 52.174 0.00 0.00 0.00 2.08
394 395 3.273351 TCCTATCCTATGCAGCTCCCTAT 59.727 47.826 0.00 0.00 0.00 2.57
395 396 2.654896 TCCTATCCTATGCAGCTCCCTA 59.345 50.000 0.00 0.00 0.00 3.53
396 397 1.434773 TCCTATCCTATGCAGCTCCCT 59.565 52.381 0.00 0.00 0.00 4.20
397 398 1.830477 CTCCTATCCTATGCAGCTCCC 59.170 57.143 0.00 0.00 0.00 4.30
398 399 2.813907 TCTCCTATCCTATGCAGCTCC 58.186 52.381 0.00 0.00 0.00 4.70
399 400 5.832595 TGATATCTCCTATCCTATGCAGCTC 59.167 44.000 3.98 0.00 36.20 4.09
400 401 5.775268 TGATATCTCCTATCCTATGCAGCT 58.225 41.667 3.98 0.00 36.20 4.24
401 402 6.267242 TCATGATATCTCCTATCCTATGCAGC 59.733 42.308 3.98 0.00 36.20 5.25
402 403 7.836479 TCATGATATCTCCTATCCTATGCAG 57.164 40.000 3.98 0.00 36.20 4.41
403 404 7.234988 CCATCATGATATCTCCTATCCTATGCA 59.765 40.741 8.15 0.00 36.20 3.96
404 405 7.310547 CCCATCATGATATCTCCTATCCTATGC 60.311 44.444 8.15 0.00 36.20 3.14
405 406 7.954620 TCCCATCATGATATCTCCTATCCTATG 59.045 40.741 8.15 0.00 36.20 2.23
406 407 8.078295 TCCCATCATGATATCTCCTATCCTAT 57.922 38.462 8.15 0.00 36.20 2.57
407 408 7.485994 TCCCATCATGATATCTCCTATCCTA 57.514 40.000 8.15 0.00 36.20 2.94
408 409 6.367047 TCCCATCATGATATCTCCTATCCT 57.633 41.667 8.15 0.00 36.20 3.24
409 410 7.630005 AATCCCATCATGATATCTCCTATCC 57.370 40.000 8.15 0.00 36.20 2.59
410 411 9.378504 ACTAATCCCATCATGATATCTCCTATC 57.621 37.037 8.15 0.00 37.36 2.08
411 412 9.741198 AACTAATCCCATCATGATATCTCCTAT 57.259 33.333 8.15 0.00 0.00 2.57
413 414 9.211410 CTAACTAATCCCATCATGATATCTCCT 57.789 37.037 8.15 0.00 0.00 3.69
414 415 9.206690 TCTAACTAATCCCATCATGATATCTCC 57.793 37.037 8.15 0.00 0.00 3.71
420 421 9.736414 CAAGAATCTAACTAATCCCATCATGAT 57.264 33.333 1.18 1.18 0.00 2.45
421 422 7.663081 GCAAGAATCTAACTAATCCCATCATGA 59.337 37.037 0.00 0.00 0.00 3.07
422 423 7.664731 AGCAAGAATCTAACTAATCCCATCATG 59.335 37.037 0.00 0.00 0.00 3.07
423 424 7.753630 AGCAAGAATCTAACTAATCCCATCAT 58.246 34.615 0.00 0.00 0.00 2.45
424 425 7.141758 AGCAAGAATCTAACTAATCCCATCA 57.858 36.000 0.00 0.00 0.00 3.07
425 426 7.333174 GCTAGCAAGAATCTAACTAATCCCATC 59.667 40.741 10.63 0.00 0.00 3.51
426 427 7.017056 AGCTAGCAAGAATCTAACTAATCCCAT 59.983 37.037 18.83 0.00 0.00 4.00
427 428 6.327626 AGCTAGCAAGAATCTAACTAATCCCA 59.672 38.462 18.83 0.00 0.00 4.37
428 429 6.764379 AGCTAGCAAGAATCTAACTAATCCC 58.236 40.000 18.83 0.00 0.00 3.85
429 430 6.871492 GGAGCTAGCAAGAATCTAACTAATCC 59.129 42.308 18.83 5.12 0.00 3.01
430 431 7.437748 TGGAGCTAGCAAGAATCTAACTAATC 58.562 38.462 18.83 0.00 0.00 1.75
431 432 7.366847 TGGAGCTAGCAAGAATCTAACTAAT 57.633 36.000 18.83 0.00 0.00 1.73
432 433 6.791867 TGGAGCTAGCAAGAATCTAACTAA 57.208 37.500 18.83 0.00 0.00 2.24
433 434 6.325028 ACATGGAGCTAGCAAGAATCTAACTA 59.675 38.462 18.83 0.00 0.00 2.24
434 435 5.130145 ACATGGAGCTAGCAAGAATCTAACT 59.870 40.000 18.83 0.00 0.00 2.24
435 436 5.236047 CACATGGAGCTAGCAAGAATCTAAC 59.764 44.000 18.83 0.00 0.00 2.34
436 437 5.363101 CACATGGAGCTAGCAAGAATCTAA 58.637 41.667 18.83 0.00 0.00 2.10
437 438 4.741837 GCACATGGAGCTAGCAAGAATCTA 60.742 45.833 18.83 3.27 0.00 1.98
438 439 3.806380 CACATGGAGCTAGCAAGAATCT 58.194 45.455 18.83 0.00 0.00 2.40
439 440 2.290093 GCACATGGAGCTAGCAAGAATC 59.710 50.000 18.83 4.83 0.00 2.52
440 441 2.295885 GCACATGGAGCTAGCAAGAAT 58.704 47.619 18.83 1.84 0.00 2.40
441 442 1.003464 TGCACATGGAGCTAGCAAGAA 59.997 47.619 18.83 0.00 31.42 2.52
442 443 0.614812 TGCACATGGAGCTAGCAAGA 59.385 50.000 18.83 0.00 31.42 3.02
443 444 1.333931 CATGCACATGGAGCTAGCAAG 59.666 52.381 18.83 3.97 38.85 4.01
444 445 1.385528 CATGCACATGGAGCTAGCAA 58.614 50.000 18.83 1.95 38.85 3.91
445 446 3.089788 CATGCACATGGAGCTAGCA 57.910 52.632 18.83 0.00 39.79 3.49
454 455 1.311859 ACTAATCGGCCATGCACATG 58.688 50.000 2.24 3.56 38.51 3.21
455 456 2.158827 TGTACTAATCGGCCATGCACAT 60.159 45.455 2.24 0.00 0.00 3.21
456 457 1.208293 TGTACTAATCGGCCATGCACA 59.792 47.619 2.24 0.00 0.00 4.57
457 458 1.948104 TGTACTAATCGGCCATGCAC 58.052 50.000 2.24 0.00 0.00 4.57
458 459 2.700722 TTGTACTAATCGGCCATGCA 57.299 45.000 2.24 0.00 0.00 3.96
459 460 4.062293 TGTATTGTACTAATCGGCCATGC 58.938 43.478 2.24 0.00 0.00 4.06
460 461 5.333035 CGTTGTATTGTACTAATCGGCCATG 60.333 44.000 2.24 0.00 0.00 3.66
461 462 4.748102 CGTTGTATTGTACTAATCGGCCAT 59.252 41.667 2.24 0.00 0.00 4.40
462 463 4.114073 CGTTGTATTGTACTAATCGGCCA 58.886 43.478 2.24 0.00 0.00 5.36
463 464 3.492011 CCGTTGTATTGTACTAATCGGCC 59.508 47.826 0.00 0.00 0.00 6.13
464 465 4.703899 CCGTTGTATTGTACTAATCGGC 57.296 45.455 0.00 0.00 0.00 5.54
465 466 3.492011 GGCCGTTGTATTGTACTAATCGG 59.508 47.826 0.00 0.00 38.67 4.18
466 467 3.180980 CGGCCGTTGTATTGTACTAATCG 59.819 47.826 19.50 0.00 0.00 3.34
467 468 3.492011 CCGGCCGTTGTATTGTACTAATC 59.508 47.826 26.12 0.00 0.00 1.75
468 469 3.460103 CCGGCCGTTGTATTGTACTAAT 58.540 45.455 26.12 0.00 0.00 1.73
469 470 2.891112 CCGGCCGTTGTATTGTACTAA 58.109 47.619 26.12 0.00 0.00 2.24
470 471 1.471327 GCCGGCCGTTGTATTGTACTA 60.471 52.381 26.12 0.00 0.00 1.82
471 472 0.741927 GCCGGCCGTTGTATTGTACT 60.742 55.000 26.12 0.00 0.00 2.73
472 473 0.741927 AGCCGGCCGTTGTATTGTAC 60.742 55.000 26.15 0.00 0.00 2.90
473 474 0.822811 TAGCCGGCCGTTGTATTGTA 59.177 50.000 26.15 0.87 0.00 2.41
474 475 0.461339 CTAGCCGGCCGTTGTATTGT 60.461 55.000 26.15 2.07 0.00 2.71
475 476 1.772063 GCTAGCCGGCCGTTGTATTG 61.772 60.000 26.15 7.77 0.00 1.90
476 477 1.523032 GCTAGCCGGCCGTTGTATT 60.523 57.895 26.15 3.86 0.00 1.89
477 478 2.108362 GCTAGCCGGCCGTTGTAT 59.892 61.111 26.15 4.77 0.00 2.29
478 479 4.151582 GGCTAGCCGGCCGTTGTA 62.152 66.667 26.15 7.60 42.82 2.41
497 498 1.135774 GGGCAGCGTTGTAACTTTAGC 60.136 52.381 0.00 0.00 0.00 3.09
503 504 2.554272 CGTGGGCAGCGTTGTAAC 59.446 61.111 0.00 0.00 0.00 2.50
530 531 5.468540 TGACATAATACAGAGCGCCTATT 57.531 39.130 2.29 3.17 0.00 1.73
584 585 5.305128 ACATGATGGCCTTTTCTCAGAAAAA 59.695 36.000 13.61 0.00 0.00 1.94
587 588 4.012374 GACATGATGGCCTTTTCTCAGAA 58.988 43.478 3.32 0.00 0.00 3.02
589 590 3.618351 AGACATGATGGCCTTTTCTCAG 58.382 45.455 3.32 0.00 0.00 3.35
591 592 3.563390 GCTAGACATGATGGCCTTTTCTC 59.437 47.826 3.32 0.00 0.00 2.87
592 593 3.201708 AGCTAGACATGATGGCCTTTTCT 59.798 43.478 3.32 1.56 0.00 2.52
593 594 3.549794 AGCTAGACATGATGGCCTTTTC 58.450 45.455 3.32 0.00 0.00 2.29
594 595 3.659183 AGCTAGACATGATGGCCTTTT 57.341 42.857 3.32 0.00 0.00 2.27
595 596 3.659183 AAGCTAGACATGATGGCCTTT 57.341 42.857 3.32 0.00 0.00 3.11
596 597 3.659183 AAAGCTAGACATGATGGCCTT 57.341 42.857 3.32 0.00 0.00 4.35
597 598 4.989875 ATAAAGCTAGACATGATGGCCT 57.010 40.909 3.32 0.00 0.00 5.19
598 599 5.049129 GTCAATAAAGCTAGACATGATGGCC 60.049 44.000 0.00 0.00 0.00 5.36
599 600 5.762218 AGTCAATAAAGCTAGACATGATGGC 59.238 40.000 0.00 0.84 33.56 4.40
600 601 8.893219 TTAGTCAATAAAGCTAGACATGATGG 57.107 34.615 0.00 0.00 33.56 3.51
651 652 9.787532 GCTATGTTTGATAGCAAAGTATTGAAA 57.212 29.630 6.36 0.00 44.12 2.69
652 653 8.405531 GGCTATGTTTGATAGCAAAGTATTGAA 58.594 33.333 6.36 0.00 46.47 2.69
670 671 8.416329 CCTAAGAAAAAGCATTATGGCTATGTT 58.584 33.333 0.00 0.00 45.07 2.71
671 672 7.014615 CCCTAAGAAAAAGCATTATGGCTATGT 59.985 37.037 0.00 0.00 45.07 2.29
672 673 7.231317 TCCCTAAGAAAAAGCATTATGGCTATG 59.769 37.037 0.00 0.00 45.07 2.23
673 674 7.297614 TCCCTAAGAAAAAGCATTATGGCTAT 58.702 34.615 0.00 0.00 45.07 2.97
674 675 6.668645 TCCCTAAGAAAAAGCATTATGGCTA 58.331 36.000 0.00 0.00 45.07 3.93
675 676 6.097412 CTTCCCTAAGAAAAAGCATTATGGCT 59.903 38.462 0.00 0.00 39.47 4.75
676 677 5.852282 TCCCTAAGAAAAAGCATTATGGC 57.148 39.130 0.00 0.00 0.00 4.40
677 678 7.645058 TCTTCCCTAAGAAAAAGCATTATGG 57.355 36.000 0.00 0.00 38.81 2.74
689 690 4.534500 TGTGGCTATGTTCTTCCCTAAGAA 59.466 41.667 0.00 0.00 46.96 2.52
690 691 4.101114 TGTGGCTATGTTCTTCCCTAAGA 58.899 43.478 0.00 0.00 40.03 2.10
691 692 4.487714 TGTGGCTATGTTCTTCCCTAAG 57.512 45.455 0.00 0.00 0.00 2.18
692 693 4.919774 TTGTGGCTATGTTCTTCCCTAA 57.080 40.909 0.00 0.00 0.00 2.69
693 694 4.227300 ACATTGTGGCTATGTTCTTCCCTA 59.773 41.667 0.00 0.00 32.48 3.53
694 695 3.010584 ACATTGTGGCTATGTTCTTCCCT 59.989 43.478 0.00 0.00 32.48 4.20
695 696 3.356290 ACATTGTGGCTATGTTCTTCCC 58.644 45.455 0.00 0.00 32.48 3.97
696 697 4.458989 TCAACATTGTGGCTATGTTCTTCC 59.541 41.667 9.25 0.00 42.63 3.46
697 698 5.627499 TCAACATTGTGGCTATGTTCTTC 57.373 39.130 9.25 0.00 42.63 2.87
698 699 6.594788 ATTCAACATTGTGGCTATGTTCTT 57.405 33.333 9.25 0.00 42.63 2.52
699 700 6.594788 AATTCAACATTGTGGCTATGTTCT 57.405 33.333 9.25 0.00 42.63 3.01
700 701 6.401367 GCAAATTCAACATTGTGGCTATGTTC 60.401 38.462 9.25 0.00 42.63 3.18
711 712 1.793532 TGCGCTGCAAATTCAACATTG 59.206 42.857 9.73 0.00 34.76 2.82
831 836 8.212495 GCATCGATTTAAAAGCATTGATTGATC 58.788 33.333 0.00 0.00 0.00 2.92
864 872 0.796870 TGACAGTGCGCTAACGATCG 60.797 55.000 14.88 14.88 43.93 3.69
869 877 0.161024 GTCGTTGACAGTGCGCTAAC 59.839 55.000 9.73 0.00 32.09 2.34
871 879 1.728074 CGTCGTTGACAGTGCGCTA 60.728 57.895 9.73 0.00 32.09 4.26
879 887 2.174969 GGTTGCCACGTCGTTGACA 61.175 57.895 0.00 0.00 32.09 3.58
929 937 4.577693 CCTCGTGTGATGATCAATTCCATT 59.422 41.667 0.00 0.00 0.00 3.16
1281 1289 1.065102 GTATGAAGGAGCGCGTACTCA 59.935 52.381 8.43 4.65 38.50 3.41
1317 1325 2.668632 GTTGACCCGGGATCAGCA 59.331 61.111 32.02 13.90 0.00 4.41
1367 1375 2.184167 CGTGGTTTTCTGGTGGCGT 61.184 57.895 0.00 0.00 0.00 5.68
1377 1385 0.037590 TCATAGGGCTGCGTGGTTTT 59.962 50.000 0.00 0.00 0.00 2.43
1463 1477 3.002102 CTCCTCTTCTTGCTTGAGCTTC 58.998 50.000 4.44 0.00 42.66 3.86
1764 1778 2.666190 GTGAGCGCTGTCTTGCCA 60.666 61.111 18.48 0.21 0.00 4.92
1879 1893 3.123157 CACTGGATGGATCATCTGGAC 57.877 52.381 7.68 0.00 40.39 4.02
1983 1997 0.456824 CATCTGTGACGTGGTCGAGG 60.457 60.000 0.00 0.00 40.62 4.63
2133 2147 3.643320 AGTAATCATCGAATGCCAGAGGA 59.357 43.478 0.00 0.00 0.00 3.71
2151 2165 4.574674 ATGCTTGAACATCCTCCAGTAA 57.425 40.909 0.00 0.00 0.00 2.24
2176 2190 0.040058 TCATCTGCAGCCCCAAATGT 59.960 50.000 9.47 0.00 0.00 2.71
2197 2211 2.896685 CCTGAGTGGAGTCTTCTTCAGT 59.103 50.000 10.50 0.00 35.69 3.41
2199 2213 2.964209 ACCTGAGTGGAGTCTTCTTCA 58.036 47.619 0.00 0.00 39.71 3.02
2216 2230 1.867363 GTCCCACTCATCCACTACCT 58.133 55.000 0.00 0.00 0.00 3.08
2218 2232 1.134560 GTCGTCCCACTCATCCACTAC 59.865 57.143 0.00 0.00 0.00 2.73
2220 2234 1.258445 GGTCGTCCCACTCATCCACT 61.258 60.000 0.00 0.00 0.00 4.00
2229 2243 0.037232 CCTCTTCAAGGTCGTCCCAC 60.037 60.000 0.00 0.00 40.67 4.61
2241 2255 1.290431 AGCTCCTCCTCATCCTCTTCA 59.710 52.381 0.00 0.00 0.00 3.02
2250 2264 2.550277 TGGTTGATAGCTCCTCCTCA 57.450 50.000 0.00 0.00 0.00 3.86
2266 2280 2.094675 GTGTGCTATTTGCTCCATGGT 58.905 47.619 12.58 0.00 43.37 3.55
2280 2294 1.376424 CTTGGCCATCTCGTGTGCT 60.376 57.895 6.09 0.00 0.00 4.40
2301 2315 0.676782 GTAACGGTGAGCAGCCCATT 60.677 55.000 0.00 0.00 0.00 3.16
2361 2375 1.774254 TCTTTCCAGTGGCCTTCTTCA 59.226 47.619 3.51 0.00 0.00 3.02
2415 2429 2.687566 ATCCCGCCGATATCCCCC 60.688 66.667 0.00 0.00 0.00 5.40
2416 2430 1.677637 GAGATCCCGCCGATATCCCC 61.678 65.000 0.00 0.00 33.78 4.81
2417 2431 1.817209 GAGATCCCGCCGATATCCC 59.183 63.158 0.00 0.00 33.78 3.85
2418 2432 1.433879 CGAGATCCCGCCGATATCC 59.566 63.158 0.00 0.00 36.07 2.59
2457 2471 2.885113 CGTGGATCGAGGTGCTGA 59.115 61.111 0.00 0.00 42.86 4.26
2466 2480 2.125552 TGCTTGAGGCGTGGATCG 60.126 61.111 0.00 0.00 45.43 3.69
2472 2486 0.463654 TGAAACACTGCTTGAGGCGT 60.464 50.000 0.00 0.00 45.43 5.68
2634 2648 1.442769 GCTGGAAGAAGCATCGTTCA 58.557 50.000 0.00 0.00 43.01 3.18
2664 2678 3.120683 CGTTGTGCATGACGTATCTGTTT 60.121 43.478 14.39 0.00 34.75 2.83
2686 2700 1.640604 GTGCTAGCTTCTGCATCGC 59.359 57.895 17.23 0.00 41.45 4.58
2714 2728 4.264217 TGACCATGTAAGACTGACTCCCTA 60.264 45.833 0.00 0.00 0.00 3.53
2721 2735 5.163509 GCTATCAGTGACCATGTAAGACTGA 60.164 44.000 13.38 13.38 45.24 3.41
2726 2740 5.268118 TGAGCTATCAGTGACCATGTAAG 57.732 43.478 0.00 0.00 0.00 2.34
2728 2742 4.926140 CTGAGCTATCAGTGACCATGTA 57.074 45.455 0.00 0.00 46.68 2.29
2865 2879 2.254546 AGAACAGGATTGTGCGAACA 57.745 45.000 0.00 0.00 37.97 3.18
3039 3053 2.894731 TCAGTGAGTCTGTTCCTGGAT 58.105 47.619 0.00 0.00 43.97 3.41
3102 3116 0.778815 GAGAGTTGCACTTGACGTCG 59.221 55.000 11.62 0.00 0.00 5.12
3420 3434 0.749454 CCATGGAACTGCTAGCCCAC 60.749 60.000 13.29 1.02 0.00 4.61
3470 3487 1.003597 AGGCACTCAAGCAGCTCTG 60.004 57.895 0.00 0.00 35.83 3.35
3684 3701 1.832167 GCCCACCTTGTTGGCAGAA 60.832 57.895 4.59 0.00 42.87 3.02
3689 3706 1.273327 GAGAAATGCCCACCTTGTTGG 59.727 52.381 0.00 0.00 42.93 3.77
3766 3783 2.872408 ACCATCCGGTGAAATGCTG 58.128 52.632 0.00 0.00 46.79 4.41
3786 3803 0.878961 GTCTTGTCGAGTTGCCGGTT 60.879 55.000 1.90 0.00 0.00 4.44
3949 3966 2.941064 ACATTGCGTCTTCTGATGATGG 59.059 45.455 12.88 3.53 0.00 3.51
3993 4010 4.498520 AGCCGCGACGTCCATCTG 62.499 66.667 8.23 0.00 0.00 2.90
4116 4133 2.354188 CAGGTGACGTCGTCGCAA 60.354 61.111 32.91 10.23 43.87 4.85
4129 4146 4.148825 GTCGGGCAGATCGCAGGT 62.149 66.667 10.82 0.00 45.17 4.00
4165 4182 1.379309 GCGAGAGGTCCCTCAGAGT 60.379 63.158 15.48 0.00 44.99 3.24
4167 4184 1.379176 CAGCGAGAGGTCCCTCAGA 60.379 63.158 15.48 0.00 44.99 3.27
4431 4448 1.872952 TCAAACATGTTCAGGCTCACG 59.127 47.619 12.39 0.00 0.00 4.35
4500 4517 0.389948 CCCAGGAACCGTCGAAGAAG 60.390 60.000 0.00 0.00 39.69 2.85
4690 4707 3.327757 GGACTGCACCTGGATATGGATAA 59.672 47.826 0.00 0.00 0.00 1.75
4692 4709 1.701847 GGACTGCACCTGGATATGGAT 59.298 52.381 0.00 0.00 0.00 3.41
4703 4720 0.035630 AATCAGCTCTGGACTGCACC 60.036 55.000 0.00 0.00 35.04 5.01
4713 4730 2.818921 AGACACCTCTGAATCAGCTCT 58.181 47.619 5.18 0.00 0.00 4.09
4764 4781 5.897050 TCAATGTAAACAACACCAACCTTC 58.103 37.500 0.00 0.00 42.09 3.46
4864 4887 6.968131 TGCATTGATCAAGTACTACTTCAC 57.032 37.500 14.54 0.00 36.03 3.18
4911 5055 3.512329 TCCAACAGTAGAGTCCGCAATAA 59.488 43.478 0.00 0.00 0.00 1.40
4916 5063 2.674796 AATCCAACAGTAGAGTCCGC 57.325 50.000 0.00 0.00 0.00 5.54
4917 5064 5.176407 CTCTAATCCAACAGTAGAGTCCG 57.824 47.826 0.00 0.00 42.55 4.79
4922 5069 7.718334 TCAATCACTCTAATCCAACAGTAGA 57.282 36.000 0.00 0.00 30.88 2.59
4923 5070 8.777865 TTTCAATCACTCTAATCCAACAGTAG 57.222 34.615 0.00 0.00 0.00 2.57
4925 5072 7.884877 TCATTTCAATCACTCTAATCCAACAGT 59.115 33.333 0.00 0.00 0.00 3.55
4926 5073 8.180267 GTCATTTCAATCACTCTAATCCAACAG 58.820 37.037 0.00 0.00 0.00 3.16
4933 5083 8.585471 ACCAATGTCATTTCAATCACTCTAAT 57.415 30.769 0.00 0.00 0.00 1.73
4940 5090 5.105797 GCAGGTACCAATGTCATTTCAATCA 60.106 40.000 15.94 0.00 0.00 2.57
4977 5189 4.585216 AGGGACACGGGGTTGGGA 62.585 66.667 0.00 0.00 0.00 4.37
4980 5192 4.388499 CGGAGGGACACGGGGTTG 62.388 72.222 0.00 0.00 0.00 3.77
4999 5211 3.885521 GGTACTCGTCGGCGGAGG 61.886 72.222 10.62 7.58 38.89 4.30
5000 5212 3.129502 TGGTACTCGTCGGCGGAG 61.130 66.667 10.62 9.49 38.89 4.63
5001 5213 3.434319 GTGGTACTCGTCGGCGGA 61.434 66.667 10.62 0.00 38.89 5.54
5002 5214 2.931713 GATGTGGTACTCGTCGGCGG 62.932 65.000 10.62 2.38 38.89 6.13
5003 5215 1.585521 GATGTGGTACTCGTCGGCG 60.586 63.158 1.15 1.15 39.92 6.46
5008 5247 1.262640 GGTGGGGATGTGGTACTCGT 61.263 60.000 0.00 0.00 0.00 4.18
5348 5639 3.429960 GCGGTTAGTCCTATCTTTCGGTT 60.430 47.826 0.00 0.00 0.00 4.44
5438 5732 1.338484 GCTCATGACCTGAAGACTGCA 60.338 52.381 0.00 0.00 32.14 4.41
5439 5733 1.367659 GCTCATGACCTGAAGACTGC 58.632 55.000 0.00 0.00 32.14 4.40
5440 5734 1.554160 AGGCTCATGACCTGAAGACTG 59.446 52.381 13.91 0.00 35.72 3.51
5441 5735 1.949799 AGGCTCATGACCTGAAGACT 58.050 50.000 13.91 0.00 35.72 3.24
5448 5742 0.904865 TCCGTTCAGGCTCATGACCT 60.905 55.000 10.11 10.11 40.77 3.85
5449 5743 0.741221 GTCCGTTCAGGCTCATGACC 60.741 60.000 0.00 0.00 40.77 4.02
5450 5744 0.037326 TGTCCGTTCAGGCTCATGAC 60.037 55.000 0.00 0.00 40.77 3.06
5451 5745 0.904649 ATGTCCGTTCAGGCTCATGA 59.095 50.000 0.00 0.00 40.77 3.07
5452 5746 1.667724 GAATGTCCGTTCAGGCTCATG 59.332 52.381 0.00 0.00 40.77 3.07
5453 5747 1.407437 GGAATGTCCGTTCAGGCTCAT 60.407 52.381 1.99 0.00 40.77 2.90
5454 5748 0.036388 GGAATGTCCGTTCAGGCTCA 60.036 55.000 1.99 0.00 40.77 4.26
5455 5749 2.768834 GGAATGTCCGTTCAGGCTC 58.231 57.895 1.99 0.00 40.77 4.70
5507 5801 0.820871 GTGTTTTGGTTGGGCAGTGA 59.179 50.000 0.00 0.00 0.00 3.41
5648 5948 0.667792 GTTAGATGGGATCGGCGCTC 60.668 60.000 7.64 0.66 0.00 5.03
5721 6021 4.560743 TGCTGTGCTGGCGGACAA 62.561 61.111 0.00 0.00 41.12 3.18
5763 6063 2.439507 AGAAGGTGAAGTTCCAAGCTGA 59.560 45.455 0.00 0.00 0.00 4.26
5785 6085 2.890945 GCAGGTTTGCTTAAGGAGGAAA 59.109 45.455 4.29 0.00 46.95 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.