Multiple sequence alignment - TraesCS1D01G369800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G369800 chr1D 100.000 2721 0 0 1 2721 448638826 448641546 0.000000e+00 5025.0
1 TraesCS1D01G369800 chr1D 80.083 723 91 42 655 1346 448601540 448602240 3.150000e-134 488.0
2 TraesCS1D01G369800 chr1D 87.298 433 38 8 1338 1767 448602166 448602584 1.900000e-131 479.0
3 TraesCS1D01G369800 chr1D 89.869 306 31 0 1370 1675 448377068 448377373 7.060000e-106 394.0
4 TraesCS1D01G369800 chr1D 91.209 273 21 1 1451 1723 448424539 448424808 4.280000e-98 368.0
5 TraesCS1D01G369800 chr1D 81.602 462 69 16 1215 1668 448440255 448440708 4.280000e-98 368.0
6 TraesCS1D01G369800 chr1D 88.704 301 23 7 2123 2422 163328607 163328897 9.270000e-95 357.0
7 TraesCS1D01G369800 chr1D 89.883 257 22 2 1469 1725 448389360 448389612 7.260000e-86 327.0
8 TraesCS1D01G369800 chr1D 90.683 161 15 0 1 161 384134146 384134306 5.900000e-52 215.0
9 TraesCS1D01G369800 chr1D 93.407 91 2 1 655 745 448423877 448423963 6.110000e-27 132.0
10 TraesCS1D01G369800 chr1B 82.447 1749 142 77 435 2123 614441988 614443631 0.000000e+00 1376.0
11 TraesCS1D01G369800 chr1B 90.263 873 72 10 1 868 614416354 614417218 0.000000e+00 1129.0
12 TraesCS1D01G369800 chr1B 83.828 674 71 26 1141 1802 614425640 614426287 8.330000e-170 606.0
13 TraesCS1D01G369800 chr1B 82.119 604 69 27 1212 1802 614420449 614421026 5.270000e-132 481.0
14 TraesCS1D01G369800 chr1B 89.153 295 22 6 1469 1759 614292712 614293000 2.580000e-95 359.0
15 TraesCS1D01G369800 chr1B 79.130 575 55 23 540 1072 614422860 614423411 1.210000e-88 337.0
16 TraesCS1D01G369800 chr1B 84.877 324 29 11 862 1177 614420140 614420451 2.630000e-80 309.0
17 TraesCS1D01G369800 chr1B 92.350 183 10 2 2539 2721 614443794 614443972 9.670000e-65 257.0
18 TraesCS1D01G369800 chr1B 85.128 195 24 5 1131 1323 447564199 447564008 7.690000e-46 195.0
19 TraesCS1D01G369800 chr1B 83.838 198 22 9 1370 1560 614278469 614278663 2.150000e-41 180.0
20 TraesCS1D01G369800 chr1B 83.598 189 31 0 1304 1492 614420508 614420696 7.740000e-41 178.0
21 TraesCS1D01G369800 chr1B 90.909 121 11 0 1370 1490 614292580 614292700 2.170000e-36 163.0
22 TraesCS1D01G369800 chr1B 89.552 67 3 1 684 750 614292083 614292145 6.240000e-12 82.4
23 TraesCS1D01G369800 chr1A 92.147 573 32 7 1469 2037 544319083 544319646 0.000000e+00 797.0
24 TraesCS1D01G369800 chr1A 79.650 1086 124 57 655 1679 544292711 544293760 0.000000e+00 691.0
25 TraesCS1D01G369800 chr1A 79.415 923 77 41 482 1346 544318126 544318993 5.120000e-152 547.0
26 TraesCS1D01G369800 chr1A 89.216 306 33 0 1370 1675 544194739 544195044 1.530000e-102 383.0
27 TraesCS1D01G369800 chr1A 92.647 136 10 0 1357 1492 544318938 544319073 2.140000e-46 196.0
28 TraesCS1D01G369800 chr1A 94.792 96 5 0 655 750 544194223 544194318 1.690000e-32 150.0
29 TraesCS1D01G369800 chr7B 80.961 1082 104 50 366 1379 658804586 658805633 0.000000e+00 763.0
30 TraesCS1D01G369800 chr7B 87.625 299 27 5 2126 2423 595460207 595459918 3.360000e-89 339.0
31 TraesCS1D01G369800 chr7B 89.062 128 14 0 5 132 68294779 68294652 2.800000e-35 159.0
32 TraesCS1D01G369800 chr7D 89.865 296 20 6 2126 2420 441858654 441858368 3.310000e-99 372.0
33 TraesCS1D01G369800 chr7D 86.087 230 24 8 2200 2428 92814201 92813979 9.740000e-60 241.0
34 TraesCS1D01G369800 chr7D 78.173 197 36 5 102 298 53628642 53628453 4.760000e-23 119.0
35 TraesCS1D01G369800 chr2D 89.298 299 22 6 2123 2420 327558751 327559040 1.540000e-97 366.0
36 TraesCS1D01G369800 chr2D 89.298 299 21 7 2126 2423 643828136 643827848 5.540000e-97 364.0
37 TraesCS1D01G369800 chr2D 88.040 301 26 6 2123 2422 370983737 370984028 5.580000e-92 348.0
38 TraesCS1D01G369800 chr5A 88.704 301 24 6 2123 2422 144028056 144028347 2.580000e-95 359.0
39 TraesCS1D01G369800 chr5A 88.851 296 23 6 2126 2420 526587509 526587795 3.330000e-94 355.0
40 TraesCS1D01G369800 chr3A 89.153 295 22 6 2126 2419 368974689 368974404 2.580000e-95 359.0
41 TraesCS1D01G369800 chr4D 88.372 301 25 6 2123 2422 324843141 324843432 1.200000e-93 353.0
42 TraesCS1D01G369800 chr4D 87.829 304 23 8 2123 2423 149174197 149173905 7.210000e-91 344.0
43 TraesCS1D01G369800 chr4A 88.372 301 25 5 2123 2422 77317981 77318272 1.200000e-93 353.0
44 TraesCS1D01G369800 chr6A 87.025 316 30 6 2124 2437 117061989 117062295 2.010000e-91 346.0
45 TraesCS1D01G369800 chr6A 85.948 306 32 7 2126 2429 17919893 17919597 1.570000e-82 316.0
46 TraesCS1D01G369800 chrUn 86.288 299 31 5 2126 2423 22428539 22428250 1.570000e-82 316.0
47 TraesCS1D01G369800 chr2B 82.012 328 50 7 1 328 482644499 482644817 1.240000e-68 270.0
48 TraesCS1D01G369800 chr2A 81.627 332 46 12 1 323 744703516 744703191 7.470000e-66 261.0
49 TraesCS1D01G369800 chr3B 78.498 293 55 5 2 293 33319266 33318981 4.630000e-43 185.0
50 TraesCS1D01G369800 chr3D 86.228 167 19 2 1 166 562688632 562688795 7.740000e-41 178.0
51 TraesCS1D01G369800 chr3D 88.722 133 15 0 1 133 32353217 32353085 2.170000e-36 163.0
52 TraesCS1D01G369800 chr5B 88.462 130 15 0 1 130 692653939 692654068 1.010000e-34 158.0
53 TraesCS1D01G369800 chr7A 85.938 64 6 3 206 267 731691448 731691510 6.290000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G369800 chr1D 448638826 448641546 2720 False 5025.000000 5025 100.000000 1 2721 1 chr1D.!!$F6 2720
1 TraesCS1D01G369800 chr1D 448601540 448602584 1044 False 483.500000 488 83.690500 655 1767 2 chr1D.!!$F8 1112
2 TraesCS1D01G369800 chr1D 448423877 448424808 931 False 250.000000 368 92.308000 655 1723 2 chr1D.!!$F7 1068
3 TraesCS1D01G369800 chr1B 614441988 614443972 1984 False 816.500000 1376 87.398500 435 2721 2 chr1B.!!$F4 2286
4 TraesCS1D01G369800 chr1B 614416354 614426287 9933 False 506.666667 1129 83.969167 1 1802 6 chr1B.!!$F3 1801
5 TraesCS1D01G369800 chr1B 614292083 614293000 917 False 201.466667 359 89.871333 684 1759 3 chr1B.!!$F2 1075
6 TraesCS1D01G369800 chr1A 544292711 544293760 1049 False 691.000000 691 79.650000 655 1679 1 chr1A.!!$F1 1024
7 TraesCS1D01G369800 chr1A 544318126 544319646 1520 False 513.333333 797 88.069667 482 2037 3 chr1A.!!$F3 1555
8 TraesCS1D01G369800 chr1A 544194223 544195044 821 False 266.500000 383 92.004000 655 1675 2 chr1A.!!$F2 1020
9 TraesCS1D01G369800 chr7B 658804586 658805633 1047 False 763.000000 763 80.961000 366 1379 1 chr7B.!!$F1 1013

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
510 519 0.179108 GTCAGTATGTCTCCGGTGCC 60.179 60.0 0.0 0.0 37.4 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2071 10637 0.179234 TTCCTGCCGTCAGTGAACAA 59.821 50.0 0.0 0.0 38.66 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.882671 GCCACCATTACATAGAACACAG 57.117 45.455 0.00 0.00 0.00 3.66
37 38 5.750067 AGAACACAGAAAAATGCACAACATC 59.250 36.000 0.00 0.00 38.34 3.06
49 50 3.631686 TGCACAACATCCATATAAGGCAC 59.368 43.478 0.00 0.00 0.00 5.01
55 56 5.751243 ACATCCATATAAGGCACGTTTTC 57.249 39.130 0.00 0.00 0.00 2.29
77 78 2.980568 TCGGATGCACGGATTAAAAGT 58.019 42.857 0.00 0.00 0.00 2.66
81 82 5.007234 TCGGATGCACGGATTAAAAGTTATG 59.993 40.000 0.00 0.00 0.00 1.90
121 122 1.276421 GTGCAGCTCCTTTCACCTAGA 59.724 52.381 0.00 0.00 0.00 2.43
126 127 1.749634 GCTCCTTTCACCTAGACGCTA 59.250 52.381 0.00 0.00 0.00 4.26
133 134 1.542915 TCACCTAGACGCTACACAACC 59.457 52.381 0.00 0.00 0.00 3.77
193 194 3.120105 CGCCTATCAGCCAGACGA 58.880 61.111 0.00 0.00 0.00 4.20
203 204 1.474478 CAGCCAGACGATACTCAGTGT 59.526 52.381 0.00 0.00 0.00 3.55
212 213 0.456824 ATACTCAGTGTCGTGCAGCG 60.457 55.000 0.00 0.00 43.01 5.18
214 215 4.284860 TCAGTGTCGTGCAGCGCT 62.285 61.111 2.64 2.64 41.07 5.92
223 224 4.687215 TGCAGCGCTGACCTGTCC 62.687 66.667 40.21 20.70 32.93 4.02
226 227 4.385405 AGCGCTGACCTGTCCTGC 62.385 66.667 10.39 0.00 0.00 4.85
244 246 1.669760 CGGGCGCTACACAAAAGGA 60.670 57.895 7.64 0.00 0.00 3.36
267 269 3.221964 AGCTGGATGAATTTGTTTCGC 57.778 42.857 0.00 0.00 37.13 4.70
271 273 4.662145 CTGGATGAATTTGTTTCGCCTAC 58.338 43.478 0.00 0.00 37.13 3.18
272 274 3.126171 TGGATGAATTTGTTTCGCCTACG 59.874 43.478 0.00 0.00 37.13 3.51
299 301 3.317993 AGTTTGTGAAATAGTTGCGCCTT 59.682 39.130 4.18 0.00 0.00 4.35
316 318 3.063485 GCCTTCGAGATCTGCTTTATCC 58.937 50.000 0.00 0.00 0.00 2.59
321 323 6.261826 CCTTCGAGATCTGCTTTATCCATTTT 59.738 38.462 0.00 0.00 0.00 1.82
329 331 2.165437 GCTTTATCCATTTTGCCCACGA 59.835 45.455 0.00 0.00 0.00 4.35
335 337 2.491693 TCCATTTTGCCCACGAAATCTC 59.508 45.455 0.00 0.00 37.72 2.75
344 346 3.609853 CCCACGAAATCTCATTTCCTGA 58.390 45.455 8.63 0.00 44.40 3.86
357 359 0.881118 TTCCTGACTTCAATTGCGGC 59.119 50.000 0.00 0.00 0.00 6.53
385 387 2.512515 GTCTCCGCAGCCACATCC 60.513 66.667 0.00 0.00 0.00 3.51
417 420 2.022129 CTTCTCCGACGTGCACCAC 61.022 63.158 12.15 4.51 0.00 4.16
427 430 2.278404 TGCACCACCAGCACCTTT 59.722 55.556 0.00 0.00 37.02 3.11
443 446 1.662122 CCTTTGCCATCGTACGGTAAC 59.338 52.381 16.52 4.11 0.00 2.50
478 486 2.428890 CTCGCTCCTCCATGTCTAACTT 59.571 50.000 0.00 0.00 0.00 2.66
479 487 3.628008 TCGCTCCTCCATGTCTAACTTA 58.372 45.455 0.00 0.00 0.00 2.24
480 488 3.380637 TCGCTCCTCCATGTCTAACTTAC 59.619 47.826 0.00 0.00 0.00 2.34
502 511 9.429359 CTTACAGAAAAATGAGTCAGTATGTCT 57.571 33.333 0.00 0.00 37.14 3.41
509 518 0.818296 AGTCAGTATGTCTCCGGTGC 59.182 55.000 0.00 0.00 37.40 5.01
510 519 0.179108 GTCAGTATGTCTCCGGTGCC 60.179 60.000 0.00 0.00 37.40 5.01
511 520 1.144057 CAGTATGTCTCCGGTGCCC 59.856 63.158 0.00 0.00 0.00 5.36
537 549 7.176865 CCCCTCTCTTCTACGTCATCATAATAA 59.823 40.741 0.00 0.00 0.00 1.40
601 629 4.319115 GCATGTGCGCATAATTTTCTATCG 59.681 41.667 15.91 0.00 33.30 2.92
602 630 5.678921 CATGTGCGCATAATTTTCTATCGA 58.321 37.500 15.91 0.00 33.30 3.59
603 631 5.726729 TGTGCGCATAATTTTCTATCGAA 57.273 34.783 15.91 0.00 0.00 3.71
604 632 5.498159 TGTGCGCATAATTTTCTATCGAAC 58.502 37.500 15.91 0.00 0.00 3.95
605 633 5.293324 TGTGCGCATAATTTTCTATCGAACT 59.707 36.000 15.91 0.00 0.00 3.01
606 634 5.617187 GTGCGCATAATTTTCTATCGAACTG 59.383 40.000 15.91 0.00 0.00 3.16
694 772 2.491152 GCATCCGCATGTGTTGGG 59.509 61.111 5.38 0.00 38.36 4.12
696 774 1.876497 GCATCCGCATGTGTTGGGTT 61.876 55.000 5.38 0.00 38.36 4.11
978 7126 3.042887 GTTTGTTTGAGCCAGTTTAGCG 58.957 45.455 0.00 0.00 34.64 4.26
1028 7192 3.710722 CCAGGACCAGGCGAGCTT 61.711 66.667 0.00 0.00 0.00 3.74
1072 7268 4.028131 CCACACCCAGGTACATACTTCTA 58.972 47.826 0.00 0.00 0.00 2.10
1083 7279 5.107143 GGTACATACTTCTATCGACGGTCTC 60.107 48.000 6.57 0.00 0.00 3.36
1091 7287 0.464013 ATCGACGGTCTCCATCGAGT 60.464 55.000 12.09 0.00 46.99 4.18
1092 7288 1.062685 CGACGGTCTCCATCGAGTG 59.937 63.158 6.57 0.00 38.10 3.51
1123 7338 1.297967 CGGCGTCTCTGAGTGATCG 60.298 63.158 4.32 7.14 0.00 3.69
1147 9524 0.250901 GTTTGCAGGAGAAGGCTGGA 60.251 55.000 0.00 0.00 0.00 3.86
1195 9584 2.283388 TACGAGGCCAAGGACCGT 60.283 61.111 5.01 12.04 35.11 4.83
1352 9774 2.429930 CCGCCAAGGACAAGACCA 59.570 61.111 0.00 0.00 45.00 4.02
1353 9775 1.228124 CCGCCAAGGACAAGACCAA 60.228 57.895 0.00 0.00 45.00 3.67
1354 9776 1.515521 CCGCCAAGGACAAGACCAAC 61.516 60.000 0.00 0.00 45.00 3.77
1355 9777 1.841663 CGCCAAGGACAAGACCAACG 61.842 60.000 0.00 0.00 0.00 4.10
1356 9778 0.534203 GCCAAGGACAAGACCAACGA 60.534 55.000 0.00 0.00 0.00 3.85
1357 9779 1.512926 CCAAGGACAAGACCAACGAG 58.487 55.000 0.00 0.00 0.00 4.18
1358 9780 1.070134 CCAAGGACAAGACCAACGAGA 59.930 52.381 0.00 0.00 0.00 4.04
1359 9781 2.135933 CAAGGACAAGACCAACGAGAC 58.864 52.381 0.00 0.00 0.00 3.36
1360 9782 0.680061 AGGACAAGACCAACGAGACC 59.320 55.000 0.00 0.00 0.00 3.85
1361 9783 0.666577 GGACAAGACCAACGAGACCG 60.667 60.000 0.00 0.00 42.50 4.79
1362 9784 1.282930 GACAAGACCAACGAGACCGC 61.283 60.000 0.00 0.00 39.95 5.68
1363 9785 2.027625 CAAGACCAACGAGACCGCC 61.028 63.158 0.00 0.00 39.95 6.13
1364 9786 3.236003 AAGACCAACGAGACCGCCC 62.236 63.158 0.00 0.00 39.95 6.13
1365 9787 3.998672 GACCAACGAGACCGCCCA 61.999 66.667 0.00 0.00 39.95 5.36
1366 9788 3.934391 GACCAACGAGACCGCCCAG 62.934 68.421 0.00 0.00 39.95 4.45
1380 9802 4.659172 CCAGGCGGCCAAGGACAA 62.659 66.667 23.09 0.00 0.00 3.18
1381 9803 3.058160 CAGGCGGCCAAGGACAAG 61.058 66.667 23.09 0.00 0.00 3.16
1382 9804 4.351054 AGGCGGCCAAGGACAAGG 62.351 66.667 23.09 0.00 0.00 3.61
1669 10202 0.394352 GGATGGGCGGAGACAACAAT 60.394 55.000 0.00 0.00 37.00 2.71
1697 10230 2.923035 CCAAGGACACCACCACCA 59.077 61.111 0.00 0.00 0.00 4.17
1727 10260 4.417183 TCACCAGGGATCACTAGACTAGAT 59.583 45.833 16.55 0.16 0.00 1.98
1755 10295 2.177173 CTCGCGCTTAATTTGCTTTCC 58.823 47.619 5.56 0.00 0.00 3.13
1806 10356 3.081061 CCAGTTTCATGATTTCCGGACA 58.919 45.455 1.83 0.00 0.00 4.02
1807 10357 3.505680 CCAGTTTCATGATTTCCGGACAA 59.494 43.478 1.83 2.11 0.00 3.18
1843 10406 0.034476 TCTGCTGCTCAGTGTCTTGG 59.966 55.000 0.00 0.00 43.32 3.61
1844 10407 1.575576 CTGCTGCTCAGTGTCTTGGC 61.576 60.000 0.00 0.00 38.02 4.52
1845 10408 2.331132 GCTGCTCAGTGTCTTGGCC 61.331 63.158 0.00 0.00 0.00 5.36
1846 10409 1.374190 CTGCTCAGTGTCTTGGCCT 59.626 57.895 3.32 0.00 0.00 5.19
1847 10410 0.673022 CTGCTCAGTGTCTTGGCCTC 60.673 60.000 3.32 0.00 0.00 4.70
1848 10411 1.123861 TGCTCAGTGTCTTGGCCTCT 61.124 55.000 3.32 0.00 0.00 3.69
1849 10412 0.036022 GCTCAGTGTCTTGGCCTCTT 59.964 55.000 3.32 0.00 0.00 2.85
1850 10413 1.544314 GCTCAGTGTCTTGGCCTCTTT 60.544 52.381 3.32 0.00 0.00 2.52
1851 10414 2.856222 CTCAGTGTCTTGGCCTCTTTT 58.144 47.619 3.32 0.00 0.00 2.27
1852 10415 2.810852 CTCAGTGTCTTGGCCTCTTTTC 59.189 50.000 3.32 0.00 0.00 2.29
1921 10484 9.838339 TCAGACTTCTCTTTTCAAGTTCTATTT 57.162 29.630 0.00 0.00 32.83 1.40
2005 10571 2.234661 TCTCATCCAAGAACGATGCAGT 59.765 45.455 0.00 0.00 37.60 4.40
2034 10600 4.108336 CACATCGAATCGAGTCATGTTCT 58.892 43.478 20.47 5.27 39.91 3.01
2099 10665 2.749076 CTGACGGCAGGAATGAATTCAA 59.251 45.455 11.57 0.00 38.51 2.69
2123 10689 8.450964 CAACGTCTTCAGATTTACCAACATATT 58.549 33.333 0.00 0.00 0.00 1.28
2124 10690 7.974675 ACGTCTTCAGATTTACCAACATATTG 58.025 34.615 0.00 0.00 35.40 1.90
2126 10692 8.331022 CGTCTTCAGATTTACCAACATATTGAG 58.669 37.037 0.00 0.00 38.15 3.02
2127 10693 8.616076 GTCTTCAGATTTACCAACATATTGAGG 58.384 37.037 0.00 0.00 38.15 3.86
2128 10694 7.775093 TCTTCAGATTTACCAACATATTGAGGG 59.225 37.037 0.00 0.00 38.15 4.30
2129 10695 5.827797 TCAGATTTACCAACATATTGAGGGC 59.172 40.000 0.00 0.00 38.15 5.19
2130 10696 5.829924 CAGATTTACCAACATATTGAGGGCT 59.170 40.000 0.00 0.00 38.15 5.19
2131 10697 6.016777 CAGATTTACCAACATATTGAGGGCTC 60.017 42.308 0.00 0.00 38.15 4.70
2132 10698 4.853468 TTACCAACATATTGAGGGCTCA 57.147 40.909 0.00 0.00 38.15 4.26
2133 10699 3.959495 ACCAACATATTGAGGGCTCAT 57.041 42.857 0.00 0.00 39.64 2.90
2134 10700 4.255510 ACCAACATATTGAGGGCTCATT 57.744 40.909 0.00 0.00 39.64 2.57
2135 10701 4.613437 ACCAACATATTGAGGGCTCATTT 58.387 39.130 0.00 0.00 39.64 2.32
2136 10702 4.403432 ACCAACATATTGAGGGCTCATTTG 59.597 41.667 0.00 0.00 39.64 2.32
2137 10703 4.202182 CCAACATATTGAGGGCTCATTTGG 60.202 45.833 0.00 0.00 39.64 3.28
2138 10704 4.255510 ACATATTGAGGGCTCATTTGGT 57.744 40.909 0.00 0.00 39.64 3.67
2139 10705 4.613437 ACATATTGAGGGCTCATTTGGTT 58.387 39.130 0.00 0.00 39.64 3.67
2140 10706 5.025453 ACATATTGAGGGCTCATTTGGTTT 58.975 37.500 0.00 0.00 39.64 3.27
2141 10707 3.967332 ATTGAGGGCTCATTTGGTTTG 57.033 42.857 0.00 0.00 39.64 2.93
2142 10708 1.631405 TGAGGGCTCATTTGGTTTGG 58.369 50.000 0.00 0.00 34.14 3.28
2143 10709 1.146774 TGAGGGCTCATTTGGTTTGGA 59.853 47.619 0.00 0.00 34.14 3.53
2144 10710 2.247358 GAGGGCTCATTTGGTTTGGAA 58.753 47.619 0.00 0.00 0.00 3.53
2145 10711 2.232208 GAGGGCTCATTTGGTTTGGAAG 59.768 50.000 0.00 0.00 0.00 3.46
2146 10712 2.158325 AGGGCTCATTTGGTTTGGAAGA 60.158 45.455 0.00 0.00 0.00 2.87
2147 10713 2.833943 GGGCTCATTTGGTTTGGAAGAT 59.166 45.455 0.00 0.00 0.00 2.40
2148 10714 3.261643 GGGCTCATTTGGTTTGGAAGATT 59.738 43.478 0.00 0.00 0.00 2.40
2149 10715 4.263025 GGGCTCATTTGGTTTGGAAGATTT 60.263 41.667 0.00 0.00 0.00 2.17
2150 10716 5.308014 GGCTCATTTGGTTTGGAAGATTTT 58.692 37.500 0.00 0.00 0.00 1.82
2151 10717 5.409520 GGCTCATTTGGTTTGGAAGATTTTC 59.590 40.000 0.00 0.00 0.00 2.29
2152 10718 5.990996 GCTCATTTGGTTTGGAAGATTTTCA 59.009 36.000 0.00 0.00 34.90 2.69
2153 10719 6.652062 GCTCATTTGGTTTGGAAGATTTTCAT 59.348 34.615 0.00 0.00 34.90 2.57
2154 10720 7.818930 GCTCATTTGGTTTGGAAGATTTTCATA 59.181 33.333 0.00 0.00 34.90 2.15
2155 10721 9.362539 CTCATTTGGTTTGGAAGATTTTCATAG 57.637 33.333 0.00 0.00 34.90 2.23
2156 10722 8.313292 TCATTTGGTTTGGAAGATTTTCATAGG 58.687 33.333 0.00 0.00 34.90 2.57
2157 10723 6.603940 TTGGTTTGGAAGATTTTCATAGGG 57.396 37.500 0.00 0.00 34.90 3.53
2158 10724 5.898120 TGGTTTGGAAGATTTTCATAGGGA 58.102 37.500 0.00 0.00 34.90 4.20
2159 10725 6.318913 TGGTTTGGAAGATTTTCATAGGGAA 58.681 36.000 0.00 0.00 34.90 3.97
2160 10726 6.784969 TGGTTTGGAAGATTTTCATAGGGAAA 59.215 34.615 0.00 0.00 43.59 3.13
2173 10739 7.938140 TTCATAGGGAAAACATAGGAACAAG 57.062 36.000 0.00 0.00 32.09 3.16
2174 10740 6.423182 TCATAGGGAAAACATAGGAACAAGG 58.577 40.000 0.00 0.00 0.00 3.61
2175 10741 6.216662 TCATAGGGAAAACATAGGAACAAGGA 59.783 38.462 0.00 0.00 0.00 3.36
2176 10742 5.536497 AGGGAAAACATAGGAACAAGGAT 57.464 39.130 0.00 0.00 0.00 3.24
2177 10743 5.903923 AGGGAAAACATAGGAACAAGGATT 58.096 37.500 0.00 0.00 0.00 3.01
2178 10744 6.322931 AGGGAAAACATAGGAACAAGGATTT 58.677 36.000 0.00 0.00 0.00 2.17
2179 10745 6.437477 AGGGAAAACATAGGAACAAGGATTTC 59.563 38.462 0.00 0.00 0.00 2.17
2180 10746 6.322491 GGAAAACATAGGAACAAGGATTTCG 58.678 40.000 0.00 0.00 0.00 3.46
2181 10747 5.897377 AAACATAGGAACAAGGATTTCGG 57.103 39.130 0.00 0.00 0.00 4.30
2182 10748 4.837093 ACATAGGAACAAGGATTTCGGA 57.163 40.909 0.00 0.00 0.00 4.55
2183 10749 4.770795 ACATAGGAACAAGGATTTCGGAG 58.229 43.478 0.00 0.00 0.00 4.63
2184 10750 2.789409 AGGAACAAGGATTTCGGAGG 57.211 50.000 0.00 0.00 0.00 4.30
2185 10751 2.266279 AGGAACAAGGATTTCGGAGGA 58.734 47.619 0.00 0.00 0.00 3.71
2186 10752 2.642807 AGGAACAAGGATTTCGGAGGAA 59.357 45.455 0.00 0.00 0.00 3.36
2187 10753 3.073946 AGGAACAAGGATTTCGGAGGAAA 59.926 43.478 0.00 0.00 45.60 3.13
2188 10754 3.824443 GGAACAAGGATTTCGGAGGAAAA 59.176 43.478 0.00 0.00 44.76 2.29
2189 10755 4.462834 GGAACAAGGATTTCGGAGGAAAAT 59.537 41.667 0.00 0.00 44.76 1.82
2190 10756 5.047306 GGAACAAGGATTTCGGAGGAAAATT 60.047 40.000 0.00 0.00 44.76 1.82
2191 10757 6.419484 AACAAGGATTTCGGAGGAAAATTT 57.581 33.333 0.00 0.00 44.76 1.82
2192 10758 6.419484 ACAAGGATTTCGGAGGAAAATTTT 57.581 33.333 2.28 2.28 44.76 1.82
2193 10759 6.455647 ACAAGGATTTCGGAGGAAAATTTTC 58.544 36.000 20.51 20.51 44.76 2.29
2194 10760 6.267699 ACAAGGATTTCGGAGGAAAATTTTCT 59.732 34.615 25.86 14.55 44.76 2.52
2195 10761 7.450323 ACAAGGATTTCGGAGGAAAATTTTCTA 59.550 33.333 25.86 8.15 44.76 2.10
2196 10762 8.470002 CAAGGATTTCGGAGGAAAATTTTCTAT 58.530 33.333 25.86 16.95 44.76 1.98
2197 10763 9.695155 AAGGATTTCGGAGGAAAATTTTCTATA 57.305 29.630 25.86 8.74 44.76 1.31
2198 10764 9.868160 AGGATTTCGGAGGAAAATTTTCTATAT 57.132 29.630 25.86 12.69 44.76 0.86
2203 10769 9.567776 TTCGGAGGAAAATTTTCTATATATGCA 57.432 29.630 25.86 0.00 37.35 3.96
2204 10770 9.739276 TCGGAGGAAAATTTTCTATATATGCAT 57.261 29.630 25.86 3.79 37.35 3.96
2216 10782 9.725019 TTTCTATATATGCATTTGGTCTGTAGG 57.275 33.333 3.54 0.00 0.00 3.18
2217 10783 8.664669 TCTATATATGCATTTGGTCTGTAGGA 57.335 34.615 3.54 0.00 0.00 2.94
2218 10784 9.100197 TCTATATATGCATTTGGTCTGTAGGAA 57.900 33.333 3.54 0.00 0.00 3.36
2219 10785 9.725019 CTATATATGCATTTGGTCTGTAGGAAA 57.275 33.333 3.54 0.00 0.00 3.13
2220 10786 6.699575 ATATGCATTTGGTCTGTAGGAAAC 57.300 37.500 3.54 0.00 0.00 2.78
2221 10787 2.811431 TGCATTTGGTCTGTAGGAAACG 59.189 45.455 0.00 0.00 0.00 3.60
2222 10788 2.414161 GCATTTGGTCTGTAGGAAACGC 60.414 50.000 0.00 0.00 0.00 4.84
2223 10789 1.504359 TTTGGTCTGTAGGAAACGCG 58.496 50.000 3.53 3.53 0.00 6.01
2224 10790 0.390124 TTGGTCTGTAGGAAACGCGT 59.610 50.000 5.58 5.58 0.00 6.01
2225 10791 1.246649 TGGTCTGTAGGAAACGCGTA 58.753 50.000 14.46 0.00 0.00 4.42
2226 10792 1.068333 TGGTCTGTAGGAAACGCGTAC 60.068 52.381 14.46 7.26 38.13 3.67
2227 10793 1.068333 GGTCTGTAGGAAACGCGTACA 60.068 52.381 14.46 12.33 43.41 2.90
2228 10794 2.416431 GGTCTGTAGGAAACGCGTACAT 60.416 50.000 14.46 10.62 44.23 2.29
2229 10795 2.597305 GTCTGTAGGAAACGCGTACATG 59.403 50.000 14.46 7.15 44.23 3.21
2230 10796 2.488937 TCTGTAGGAAACGCGTACATGA 59.511 45.455 14.46 9.36 44.23 3.07
2231 10797 3.057386 TCTGTAGGAAACGCGTACATGAA 60.057 43.478 14.46 0.00 44.23 2.57
2232 10798 3.852286 TGTAGGAAACGCGTACATGAAT 58.148 40.909 14.46 0.00 41.47 2.57
2233 10799 4.247258 TGTAGGAAACGCGTACATGAATT 58.753 39.130 14.46 0.00 41.47 2.17
2234 10800 4.691685 TGTAGGAAACGCGTACATGAATTT 59.308 37.500 14.46 0.00 41.47 1.82
2235 10801 4.336532 AGGAAACGCGTACATGAATTTC 57.663 40.909 14.46 10.01 0.00 2.17
2236 10802 3.088552 GGAAACGCGTACATGAATTTCG 58.911 45.455 14.46 0.00 0.00 3.46
2237 10803 3.423907 GGAAACGCGTACATGAATTTCGT 60.424 43.478 14.46 0.00 0.00 3.85
2238 10804 4.201608 GGAAACGCGTACATGAATTTCGTA 60.202 41.667 14.46 0.00 0.00 3.43
2239 10805 4.494597 AACGCGTACATGAATTTCGTAG 57.505 40.909 14.46 0.00 0.00 3.51
2240 10806 2.855963 ACGCGTACATGAATTTCGTAGG 59.144 45.455 11.67 0.00 0.00 3.18
2241 10807 3.110358 CGCGTACATGAATTTCGTAGGA 58.890 45.455 0.00 0.00 0.00 2.94
2242 10808 3.548668 CGCGTACATGAATTTCGTAGGAA 59.451 43.478 0.00 0.00 0.00 3.36
2243 10809 4.208460 CGCGTACATGAATTTCGTAGGAAT 59.792 41.667 0.00 0.00 30.88 3.01
2244 10810 5.432157 GCGTACATGAATTTCGTAGGAATG 58.568 41.667 0.00 0.00 30.88 2.67
2245 10811 5.432157 CGTACATGAATTTCGTAGGAATGC 58.568 41.667 0.00 0.00 30.88 3.56
2246 10812 5.234329 CGTACATGAATTTCGTAGGAATGCT 59.766 40.000 0.00 0.00 30.88 3.79
2247 10813 6.419710 CGTACATGAATTTCGTAGGAATGCTA 59.580 38.462 0.00 0.00 30.88 3.49
2248 10814 6.604735 ACATGAATTTCGTAGGAATGCTAC 57.395 37.500 0.00 1.56 30.88 3.58
2249 10815 6.349300 ACATGAATTTCGTAGGAATGCTACT 58.651 36.000 10.12 0.00 30.88 2.57
2250 10816 6.480320 ACATGAATTTCGTAGGAATGCTACTC 59.520 38.462 10.12 1.43 30.88 2.59
2251 10817 5.972935 TGAATTTCGTAGGAATGCTACTCA 58.027 37.500 10.12 3.91 30.88 3.41
2252 10818 6.582636 TGAATTTCGTAGGAATGCTACTCAT 58.417 36.000 10.12 0.00 36.87 2.90
2254 10820 7.552687 TGAATTTCGTAGGAATGCTACTCATTT 59.447 33.333 10.12 0.00 44.95 2.32
2255 10821 6.903883 TTTCGTAGGAATGCTACTCATTTC 57.096 37.500 10.12 0.00 44.95 2.17
2257 10823 6.222038 TCGTAGGAATGCTACTCATTTCTT 57.778 37.500 10.12 0.00 46.44 2.52
2258 10824 6.042777 TCGTAGGAATGCTACTCATTTCTTG 58.957 40.000 10.12 0.00 46.44 3.02
2259 10825 5.812642 CGTAGGAATGCTACTCATTTCTTGT 59.187 40.000 10.12 0.00 46.44 3.16
2260 10826 6.237942 CGTAGGAATGCTACTCATTTCTTGTG 60.238 42.308 10.12 0.00 46.44 3.33
2261 10827 5.564550 AGGAATGCTACTCATTTCTTGTGT 58.435 37.500 0.00 0.00 46.44 3.72
2262 10828 6.006449 AGGAATGCTACTCATTTCTTGTGTT 58.994 36.000 0.00 0.00 46.44 3.32
2263 10829 6.491403 AGGAATGCTACTCATTTCTTGTGTTT 59.509 34.615 0.00 0.00 46.44 2.83
2264 10830 7.014615 AGGAATGCTACTCATTTCTTGTGTTTT 59.985 33.333 0.00 0.00 46.44 2.43
2265 10831 7.653311 GGAATGCTACTCATTTCTTGTGTTTTT 59.347 33.333 0.00 0.00 44.95 1.94
2266 10832 9.677567 GAATGCTACTCATTTCTTGTGTTTTTA 57.322 29.630 0.00 0.00 44.95 1.52
2267 10833 9.683069 AATGCTACTCATTTCTTGTGTTTTTAG 57.317 29.630 0.00 0.00 42.48 1.85
2268 10834 7.648142 TGCTACTCATTTCTTGTGTTTTTAGG 58.352 34.615 0.00 0.00 34.13 2.69
2269 10835 7.084486 GCTACTCATTTCTTGTGTTTTTAGGG 58.916 38.462 0.00 0.00 34.13 3.53
2270 10836 7.040686 GCTACTCATTTCTTGTGTTTTTAGGGA 60.041 37.037 0.00 0.00 34.13 4.20
2271 10837 7.654022 ACTCATTTCTTGTGTTTTTAGGGAA 57.346 32.000 0.00 0.00 0.00 3.97
2272 10838 8.073467 ACTCATTTCTTGTGTTTTTAGGGAAA 57.927 30.769 0.00 0.00 0.00 3.13
2273 10839 7.979537 ACTCATTTCTTGTGTTTTTAGGGAAAC 59.020 33.333 0.00 0.00 39.41 2.78
2274 10840 8.073467 TCATTTCTTGTGTTTTTAGGGAAACT 57.927 30.769 2.68 0.00 39.62 2.66
2275 10841 9.191479 TCATTTCTTGTGTTTTTAGGGAAACTA 57.809 29.630 2.68 0.00 39.62 2.24
2276 10842 9.244799 CATTTCTTGTGTTTTTAGGGAAACTAC 57.755 33.333 2.68 1.03 39.62 2.73
2277 10843 7.941431 TTCTTGTGTTTTTAGGGAAACTACA 57.059 32.000 2.68 3.11 39.62 2.74
2278 10844 7.324354 TCTTGTGTTTTTAGGGAAACTACAC 57.676 36.000 0.00 0.00 39.62 2.90
2279 10845 6.885376 TCTTGTGTTTTTAGGGAAACTACACA 59.115 34.615 0.00 0.00 42.64 3.72
2280 10846 7.558444 TCTTGTGTTTTTAGGGAAACTACACAT 59.442 33.333 13.83 0.00 43.18 3.21
2281 10847 7.266922 TGTGTTTTTAGGGAAACTACACATC 57.733 36.000 0.00 0.00 41.15 3.06
2282 10848 6.263617 TGTGTTTTTAGGGAAACTACACATCC 59.736 38.462 0.00 0.00 41.15 3.51
2283 10849 6.263617 GTGTTTTTAGGGAAACTACACATCCA 59.736 38.462 0.00 0.00 38.74 3.41
2284 10850 7.007723 TGTTTTTAGGGAAACTACACATCCAT 58.992 34.615 2.68 0.00 39.62 3.41
2285 10851 7.507616 TGTTTTTAGGGAAACTACACATCCATT 59.492 33.333 2.68 0.00 39.62 3.16
2286 10852 7.696992 TTTTAGGGAAACTACACATCCATTC 57.303 36.000 0.00 0.00 34.82 2.67
2287 10853 4.927267 AGGGAAACTACACATCCATTCA 57.073 40.909 0.00 0.00 34.82 2.57
2288 10854 5.255397 AGGGAAACTACACATCCATTCAA 57.745 39.130 0.00 0.00 34.82 2.69
2289 10855 5.640147 AGGGAAACTACACATCCATTCAAA 58.360 37.500 0.00 0.00 34.82 2.69
2290 10856 5.711976 AGGGAAACTACACATCCATTCAAAG 59.288 40.000 0.00 0.00 34.82 2.77
2291 10857 5.402398 GGAAACTACACATCCATTCAAAGC 58.598 41.667 0.00 0.00 33.30 3.51
2292 10858 5.183904 GGAAACTACACATCCATTCAAAGCT 59.816 40.000 0.00 0.00 33.30 3.74
2293 10859 5.886960 AACTACACATCCATTCAAAGCTC 57.113 39.130 0.00 0.00 0.00 4.09
2294 10860 4.910195 ACTACACATCCATTCAAAGCTCA 58.090 39.130 0.00 0.00 0.00 4.26
2295 10861 5.503927 ACTACACATCCATTCAAAGCTCAT 58.496 37.500 0.00 0.00 0.00 2.90
2296 10862 5.948162 ACTACACATCCATTCAAAGCTCATT 59.052 36.000 0.00 0.00 0.00 2.57
2297 10863 5.733620 ACACATCCATTCAAAGCTCATTT 57.266 34.783 0.00 0.00 0.00 2.32
2298 10864 6.105397 ACACATCCATTCAAAGCTCATTTT 57.895 33.333 0.00 0.00 0.00 1.82
2299 10865 5.929992 ACACATCCATTCAAAGCTCATTTTG 59.070 36.000 0.00 0.00 38.97 2.44
2300 10866 4.933400 ACATCCATTCAAAGCTCATTTTGC 59.067 37.500 0.00 0.00 37.83 3.68
2301 10867 3.577667 TCCATTCAAAGCTCATTTTGCG 58.422 40.909 0.00 0.00 37.83 4.85
2302 10868 2.093152 CCATTCAAAGCTCATTTTGCGC 59.907 45.455 0.00 0.00 37.83 6.09
2303 10869 1.407434 TTCAAAGCTCATTTTGCGCG 58.593 45.000 0.00 0.00 37.83 6.86
2304 10870 0.310543 TCAAAGCTCATTTTGCGCGT 59.689 45.000 8.43 0.00 37.83 6.01
2305 10871 1.533299 TCAAAGCTCATTTTGCGCGTA 59.467 42.857 8.43 0.00 37.83 4.42
2306 10872 1.906966 CAAAGCTCATTTTGCGCGTAG 59.093 47.619 8.43 0.00 32.55 3.51
2307 10873 0.447801 AAGCTCATTTTGCGCGTAGG 59.552 50.000 8.43 0.00 32.55 3.18
2308 10874 0.391130 AGCTCATTTTGCGCGTAGGA 60.391 50.000 8.43 0.00 32.55 2.94
2309 10875 0.446222 GCTCATTTTGCGCGTAGGAA 59.554 50.000 8.43 2.45 0.00 3.36
2310 10876 1.790481 GCTCATTTTGCGCGTAGGAAC 60.790 52.381 8.43 0.00 0.00 3.62
2322 10888 2.450609 GTAGGAACGAGGCAAGTCAA 57.549 50.000 0.00 0.00 0.00 3.18
2323 10889 2.973945 GTAGGAACGAGGCAAGTCAAT 58.026 47.619 0.00 0.00 0.00 2.57
2324 10890 2.568623 AGGAACGAGGCAAGTCAATT 57.431 45.000 0.00 0.00 0.00 2.32
2325 10891 2.427506 AGGAACGAGGCAAGTCAATTC 58.572 47.619 0.00 0.00 0.00 2.17
2326 10892 1.468914 GGAACGAGGCAAGTCAATTCC 59.531 52.381 0.00 0.00 0.00 3.01
2327 10893 2.427506 GAACGAGGCAAGTCAATTCCT 58.572 47.619 0.00 0.00 0.00 3.36
2328 10894 2.568623 ACGAGGCAAGTCAATTCCTT 57.431 45.000 0.00 0.00 0.00 3.36
2329 10895 3.695830 ACGAGGCAAGTCAATTCCTTA 57.304 42.857 0.00 0.00 0.00 2.69
2330 10896 4.015872 ACGAGGCAAGTCAATTCCTTAA 57.984 40.909 0.00 0.00 0.00 1.85
2331 10897 4.003648 ACGAGGCAAGTCAATTCCTTAAG 58.996 43.478 0.00 0.00 0.00 1.85
2332 10898 4.253685 CGAGGCAAGTCAATTCCTTAAGA 58.746 43.478 3.36 0.00 0.00 2.10
2333 10899 4.878397 CGAGGCAAGTCAATTCCTTAAGAT 59.122 41.667 3.36 0.00 0.00 2.40
2334 10900 5.220739 CGAGGCAAGTCAATTCCTTAAGATG 60.221 44.000 3.36 0.00 0.00 2.90
2335 10901 4.952335 AGGCAAGTCAATTCCTTAAGATGG 59.048 41.667 3.36 0.00 0.00 3.51
2336 10902 4.440663 GGCAAGTCAATTCCTTAAGATGGC 60.441 45.833 3.36 0.00 0.00 4.40
2337 10903 4.158394 GCAAGTCAATTCCTTAAGATGGCA 59.842 41.667 3.36 0.00 0.00 4.92
2338 10904 5.336690 GCAAGTCAATTCCTTAAGATGGCAA 60.337 40.000 3.36 0.00 0.00 4.52
2339 10905 5.904362 AGTCAATTCCTTAAGATGGCAAC 57.096 39.130 3.36 0.00 0.00 4.17
2340 10906 5.574188 AGTCAATTCCTTAAGATGGCAACT 58.426 37.500 3.36 0.00 37.61 3.16
2341 10907 6.012745 AGTCAATTCCTTAAGATGGCAACTT 58.987 36.000 14.64 14.64 37.61 2.66
2342 10908 6.071728 AGTCAATTCCTTAAGATGGCAACTTG 60.072 38.462 18.97 4.30 37.61 3.16
2343 10909 5.185635 TCAATTCCTTAAGATGGCAACTTGG 59.814 40.000 18.97 12.79 37.61 3.61
2344 10910 2.446435 TCCTTAAGATGGCAACTTGGC 58.554 47.619 18.97 8.38 44.03 4.52
2352 10918 2.114638 GGCAACTTGGCAAGTGTCA 58.885 52.632 31.75 0.00 41.91 3.58
2353 10919 0.675633 GGCAACTTGGCAAGTGTCAT 59.324 50.000 31.75 14.74 41.91 3.06
2354 10920 1.336240 GGCAACTTGGCAAGTGTCATC 60.336 52.381 31.75 18.07 41.91 2.92
2355 10921 1.336240 GCAACTTGGCAAGTGTCATCC 60.336 52.381 31.75 13.44 41.91 3.51
2356 10922 2.233271 CAACTTGGCAAGTGTCATCCT 58.767 47.619 31.75 12.87 41.91 3.24
2357 10923 3.411446 CAACTTGGCAAGTGTCATCCTA 58.589 45.455 31.75 0.00 41.91 2.94
2358 10924 4.012374 CAACTTGGCAAGTGTCATCCTAT 58.988 43.478 31.75 11.38 41.91 2.57
2359 10925 4.307032 ACTTGGCAAGTGTCATCCTATT 57.693 40.909 30.71 2.33 41.01 1.73
2360 10926 5.435686 ACTTGGCAAGTGTCATCCTATTA 57.564 39.130 30.71 0.00 41.01 0.98
2361 10927 5.815581 ACTTGGCAAGTGTCATCCTATTAA 58.184 37.500 30.71 0.00 41.01 1.40
2362 10928 6.245408 ACTTGGCAAGTGTCATCCTATTAAA 58.755 36.000 30.71 0.00 41.01 1.52
2363 10929 6.891908 ACTTGGCAAGTGTCATCCTATTAAAT 59.108 34.615 30.71 0.56 41.01 1.40
2364 10930 7.397192 ACTTGGCAAGTGTCATCCTATTAAATT 59.603 33.333 30.71 0.19 41.01 1.82
2365 10931 7.333528 TGGCAAGTGTCATCCTATTAAATTC 57.666 36.000 0.00 0.00 0.00 2.17
2366 10932 6.321181 TGGCAAGTGTCATCCTATTAAATTCC 59.679 38.462 0.00 0.00 0.00 3.01
2367 10933 6.547510 GGCAAGTGTCATCCTATTAAATTCCT 59.452 38.462 0.00 0.00 0.00 3.36
2368 10934 7.719633 GGCAAGTGTCATCCTATTAAATTCCTA 59.280 37.037 0.00 0.00 0.00 2.94
2369 10935 9.289782 GCAAGTGTCATCCTATTAAATTCCTAT 57.710 33.333 0.00 0.00 0.00 2.57
2388 10954 9.683870 ATTCCTATACTACTCCTAATTCCTACG 57.316 37.037 0.00 0.00 0.00 3.51
2389 10955 8.212259 TCCTATACTACTCCTAATTCCTACGT 57.788 38.462 0.00 0.00 0.00 3.57
2390 10956 8.664079 TCCTATACTACTCCTAATTCCTACGTT 58.336 37.037 0.00 0.00 0.00 3.99
2391 10957 9.294614 CCTATACTACTCCTAATTCCTACGTTT 57.705 37.037 0.00 0.00 0.00 3.60
2393 10959 6.129053 ACTACTCCTAATTCCTACGTTTCG 57.871 41.667 0.00 0.00 0.00 3.46
2394 10960 5.882557 ACTACTCCTAATTCCTACGTTTCGA 59.117 40.000 0.00 0.00 0.00 3.71
2395 10961 5.848833 ACTCCTAATTCCTACGTTTCGAT 57.151 39.130 0.00 0.00 0.00 3.59
2396 10962 6.218108 ACTCCTAATTCCTACGTTTCGATT 57.782 37.500 0.00 0.00 0.00 3.34
2397 10963 6.637657 ACTCCTAATTCCTACGTTTCGATTT 58.362 36.000 0.00 0.00 0.00 2.17
2398 10964 6.755607 ACTCCTAATTCCTACGTTTCGATTTC 59.244 38.462 0.00 0.00 0.00 2.17
2399 10965 6.044682 TCCTAATTCCTACGTTTCGATTTCC 58.955 40.000 0.00 0.00 0.00 3.13
2400 10966 6.047231 CCTAATTCCTACGTTTCGATTTCCT 58.953 40.000 0.00 0.00 0.00 3.36
2401 10967 6.200475 CCTAATTCCTACGTTTCGATTTCCTC 59.800 42.308 0.00 0.00 0.00 3.71
2402 10968 3.515330 TCCTACGTTTCGATTTCCTCC 57.485 47.619 0.00 0.00 0.00 4.30
2403 10969 2.827322 TCCTACGTTTCGATTTCCTCCA 59.173 45.455 0.00 0.00 0.00 3.86
2404 10970 3.258872 TCCTACGTTTCGATTTCCTCCAA 59.741 43.478 0.00 0.00 0.00 3.53
2405 10971 3.998341 CCTACGTTTCGATTTCCTCCAAA 59.002 43.478 0.00 0.00 0.00 3.28
2406 10972 4.453136 CCTACGTTTCGATTTCCTCCAAAA 59.547 41.667 0.00 0.00 0.00 2.44
2407 10973 4.219143 ACGTTTCGATTTCCTCCAAAAC 57.781 40.909 0.00 0.00 0.00 2.43
2408 10974 3.004002 ACGTTTCGATTTCCTCCAAAACC 59.996 43.478 0.00 0.00 0.00 3.27
2409 10975 3.561503 GTTTCGATTTCCTCCAAAACCG 58.438 45.455 0.00 0.00 0.00 4.44
2410 10976 2.843401 TCGATTTCCTCCAAAACCGA 57.157 45.000 0.00 0.00 33.44 4.69
2411 10977 3.128852 TCGATTTCCTCCAAAACCGAA 57.871 42.857 0.00 0.00 33.14 4.30
2412 10978 3.681593 TCGATTTCCTCCAAAACCGAAT 58.318 40.909 0.00 0.00 33.14 3.34
2413 10979 3.438781 TCGATTTCCTCCAAAACCGAATG 59.561 43.478 0.00 0.00 33.14 2.67
2414 10980 3.438781 CGATTTCCTCCAAAACCGAATGA 59.561 43.478 0.00 0.00 0.00 2.57
2415 10981 4.437390 CGATTTCCTCCAAAACCGAATGAG 60.437 45.833 0.00 0.00 0.00 2.90
2416 10982 1.821216 TCCTCCAAAACCGAATGAGC 58.179 50.000 0.00 0.00 0.00 4.26
2417 10983 0.811281 CCTCCAAAACCGAATGAGCC 59.189 55.000 0.00 0.00 0.00 4.70
2418 10984 0.811281 CTCCAAAACCGAATGAGCCC 59.189 55.000 0.00 0.00 0.00 5.19
2419 10985 0.404040 TCCAAAACCGAATGAGCCCT 59.596 50.000 0.00 0.00 0.00 5.19
2420 10986 0.527565 CCAAAACCGAATGAGCCCTG 59.472 55.000 0.00 0.00 0.00 4.45
2421 10987 1.533625 CAAAACCGAATGAGCCCTGA 58.466 50.000 0.00 0.00 0.00 3.86
2422 10988 1.885887 CAAAACCGAATGAGCCCTGAA 59.114 47.619 0.00 0.00 0.00 3.02
2423 10989 1.534729 AAACCGAATGAGCCCTGAAC 58.465 50.000 0.00 0.00 0.00 3.18
2424 10990 0.693049 AACCGAATGAGCCCTGAACT 59.307 50.000 0.00 0.00 0.00 3.01
2430 10996 3.320626 GAATGAGCCCTGAACTTTTTGC 58.679 45.455 0.00 0.00 0.00 3.68
2437 11003 1.959282 CCTGAACTTTTTGCTGGAGCT 59.041 47.619 0.00 0.00 42.66 4.09
2438 11004 2.288030 CCTGAACTTTTTGCTGGAGCTG 60.288 50.000 0.00 0.00 42.66 4.24
2439 11005 2.620115 CTGAACTTTTTGCTGGAGCTGA 59.380 45.455 0.00 0.00 42.66 4.26
2446 11012 2.057137 TTGCTGGAGCTGAACACTTT 57.943 45.000 0.00 0.00 42.66 2.66
2447 11013 2.057137 TGCTGGAGCTGAACACTTTT 57.943 45.000 0.00 0.00 42.66 2.27
2448 11014 2.378038 TGCTGGAGCTGAACACTTTTT 58.622 42.857 0.00 0.00 42.66 1.94
2470 11036 1.469767 GGCAATTCCTTTCGTCCATGC 60.470 52.381 0.00 0.00 0.00 4.06
2475 11041 1.522668 TCCTTTCGTCCATGCACAAG 58.477 50.000 0.00 0.00 0.00 3.16
2476 11042 1.071542 TCCTTTCGTCCATGCACAAGA 59.928 47.619 0.00 0.00 0.00 3.02
2481 11052 2.503331 TCGTCCATGCACAAGAACATT 58.497 42.857 0.00 0.00 0.00 2.71
2493 11064 5.696822 CACAAGAACATTGTCCTTCATCTG 58.303 41.667 0.00 0.00 0.00 2.90
2507 11137 5.009010 TCCTTCATCTGTTTTTCAAGCAGAC 59.991 40.000 5.31 0.00 41.33 3.51
2521 11151 7.418337 TTCAAGCAGACTTATATGGTCTACA 57.582 36.000 11.20 0.00 41.45 2.74
2522 11152 7.603180 TCAAGCAGACTTATATGGTCTACAT 57.397 36.000 11.20 0.00 41.45 2.29
2523 11153 8.706322 TCAAGCAGACTTATATGGTCTACATA 57.294 34.615 11.20 0.00 41.45 2.29
2524 11154 9.143155 TCAAGCAGACTTATATGGTCTACATAA 57.857 33.333 11.20 0.00 41.45 1.90
2525 11155 9.764363 CAAGCAGACTTATATGGTCTACATAAA 57.236 33.333 11.20 0.00 41.45 1.40
2526 11156 9.765795 AAGCAGACTTATATGGTCTACATAAAC 57.234 33.333 11.20 0.00 44.75 2.01
2527 11157 8.368668 AGCAGACTTATATGGTCTACATAAACC 58.631 37.037 11.20 0.00 44.75 3.27
2537 11167 7.033530 TGGTCTACATAAACCAGTGTTTTTG 57.966 36.000 0.00 6.95 41.92 2.44
2672 11302 8.686334 ACACAGCAGAAAGAATCTAAAAGAAAA 58.314 29.630 0.00 0.00 36.32 2.29
2688 11318 4.110036 AGAAAAACACAACAGGAAGTGC 57.890 40.909 0.00 0.00 39.30 4.40
2697 11327 1.207791 ACAGGAAGTGCCCCTATCAG 58.792 55.000 0.00 0.00 37.37 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 6.804677 TGTTGTGCATTTTTCTGTGTTCTAT 58.195 32.000 0.00 0.00 0.00 1.98
21 22 7.042523 GCCTTATATGGATGTTGTGCATTTTTC 60.043 37.037 8.82 0.00 39.78 2.29
37 38 4.319477 CCGATGAAAACGTGCCTTATATGG 60.319 45.833 0.00 0.14 0.00 2.74
49 50 0.247655 CCGTGCATCCGATGAAAACG 60.248 55.000 12.79 15.94 34.82 3.60
55 56 3.312421 ACTTTTAATCCGTGCATCCGATG 59.688 43.478 3.82 3.82 0.00 3.84
81 82 9.665264 GCTGCACTACTTTATATTAAAACCATC 57.335 33.333 0.00 0.00 0.00 3.51
97 98 1.002544 GGTGAAAGGAGCTGCACTACT 59.997 52.381 8.35 0.00 43.71 2.57
106 107 0.533032 AGCGTCTAGGTGAAAGGAGC 59.467 55.000 0.00 0.00 0.00 4.70
121 122 1.540363 CCACTCTTGGTTGTGTAGCGT 60.540 52.381 0.00 0.00 38.23 5.07
126 127 1.152756 GCCCCACTCTTGGTTGTGT 60.153 57.895 0.00 0.00 42.10 3.72
181 182 2.360483 CACTGAGTATCGTCTGGCTGAT 59.640 50.000 0.00 0.00 38.61 2.90
193 194 3.425578 GCTGCACGACACTGAGTAT 57.574 52.632 0.00 0.00 0.00 2.12
223 224 2.513065 CTTTTGTGTAGCGCCCGCAG 62.513 60.000 15.50 0.00 44.88 5.18
226 227 1.024579 ATCCTTTTGTGTAGCGCCCG 61.025 55.000 2.29 0.00 0.00 6.13
227 228 1.173913 AATCCTTTTGTGTAGCGCCC 58.826 50.000 2.29 0.00 0.00 6.13
230 231 3.063997 CCAGCTAATCCTTTTGTGTAGCG 59.936 47.826 0.00 0.00 41.62 4.26
231 232 4.261801 TCCAGCTAATCCTTTTGTGTAGC 58.738 43.478 0.00 0.00 37.94 3.58
232 233 6.115446 TCATCCAGCTAATCCTTTTGTGTAG 58.885 40.000 0.00 0.00 0.00 2.74
244 246 5.343249 GCGAAACAAATTCATCCAGCTAAT 58.657 37.500 0.00 0.00 37.96 1.73
267 269 9.755064 CAACTATTTCACAAACTAAATCGTAGG 57.245 33.333 0.00 0.00 0.00 3.18
271 273 6.236941 GCGCAACTATTTCACAAACTAAATCG 60.237 38.462 0.30 0.00 0.00 3.34
272 274 6.033513 GGCGCAACTATTTCACAAACTAAATC 59.966 38.462 10.83 0.00 0.00 2.17
299 301 5.008019 GCAAAATGGATAAAGCAGATCTCGA 59.992 40.000 0.00 0.00 0.00 4.04
316 318 3.574284 TGAGATTTCGTGGGCAAAATG 57.426 42.857 0.00 0.00 0.00 2.32
329 331 7.095270 GCAATTGAAGTCAGGAAATGAGATTT 58.905 34.615 10.34 0.00 39.07 2.17
335 337 3.504863 CCGCAATTGAAGTCAGGAAATG 58.495 45.455 10.34 0.00 0.00 2.32
344 346 1.203052 CATGAAGGCCGCAATTGAAGT 59.797 47.619 10.34 0.00 0.00 3.01
357 359 1.450312 GCGGAGACCACCATGAAGG 60.450 63.158 0.00 0.00 45.67 3.46
422 425 0.896923 TACCGTACGATGGCAAAGGT 59.103 50.000 18.76 5.02 0.00 3.50
427 430 1.516892 GGGTTACCGTACGATGGCA 59.483 57.895 18.76 0.00 0.00 4.92
478 486 8.035394 GGAGACATACTGACTCATTTTTCTGTA 58.965 37.037 8.44 0.00 40.14 2.74
479 487 6.876257 GGAGACATACTGACTCATTTTTCTGT 59.124 38.462 8.44 0.00 40.14 3.41
480 488 6.035435 CGGAGACATACTGACTCATTTTTCTG 59.965 42.308 8.44 0.00 40.14 3.02
493 502 1.144057 GGGCACCGGAGACATACTG 59.856 63.158 9.46 0.00 40.86 2.74
510 519 1.957877 GATGACGTAGAAGAGAGGGGG 59.042 57.143 0.00 0.00 0.00 5.40
511 520 2.656002 TGATGACGTAGAAGAGAGGGG 58.344 52.381 0.00 0.00 0.00 4.79
558 577 4.022603 TGCCATGCTTACATTACCACAAT 58.977 39.130 0.00 0.00 32.87 2.71
601 629 6.286758 TCATTGCATCTCTATTCTCCAGTTC 58.713 40.000 0.00 0.00 0.00 3.01
602 630 6.244552 TCATTGCATCTCTATTCTCCAGTT 57.755 37.500 0.00 0.00 0.00 3.16
603 631 5.221682 CCTCATTGCATCTCTATTCTCCAGT 60.222 44.000 0.00 0.00 0.00 4.00
604 632 5.239351 CCTCATTGCATCTCTATTCTCCAG 58.761 45.833 0.00 0.00 0.00 3.86
605 633 4.504514 GCCTCATTGCATCTCTATTCTCCA 60.505 45.833 0.00 0.00 0.00 3.86
606 634 4.002316 GCCTCATTGCATCTCTATTCTCC 58.998 47.826 0.00 0.00 0.00 3.71
917 7050 6.256104 CAGCAGTCAGAGAACAAGATAATCTG 59.744 42.308 0.00 0.00 38.97 2.90
931 7064 2.101783 AGAGTGGATCAGCAGTCAGAG 58.898 52.381 8.84 0.00 0.00 3.35
978 7126 0.745468 CCCACGTAGGAAGGAGTAGC 59.255 60.000 0.00 0.00 41.22 3.58
1111 7321 2.732412 AACACCACGATCACTCAGAG 57.268 50.000 0.00 0.00 0.00 3.35
1123 7338 0.954452 CCTTCTCCTGCAAACACCAC 59.046 55.000 0.00 0.00 0.00 4.16
1334 9756 3.056328 GGTCTTGTCCTTGGCGGC 61.056 66.667 0.00 0.00 0.00 6.53
1336 9758 1.841663 CGTTGGTCTTGTCCTTGGCG 61.842 60.000 0.00 0.00 0.00 5.69
1349 9771 4.003788 CTGGGCGGTCTCGTTGGT 62.004 66.667 0.00 0.00 38.89 3.67
1363 9785 4.659172 TTGTCCTTGGCCGCCTGG 62.659 66.667 11.61 12.85 38.77 4.45
1364 9786 3.058160 CTTGTCCTTGGCCGCCTG 61.058 66.667 11.61 3.48 0.00 4.85
1365 9787 4.351054 CCTTGTCCTTGGCCGCCT 62.351 66.667 11.61 0.00 0.00 5.52
1486 9974 2.874780 GTGTACTGCGCCGTCTCG 60.875 66.667 8.05 0.00 0.00 4.04
1669 10202 1.071814 GTCCTTGGCGGTGTTGGTA 59.928 57.895 0.00 0.00 0.00 3.25
1697 10230 3.458831 AGTGATCCCTGGTGATCTTCTT 58.541 45.455 19.33 6.29 41.42 2.52
1806 10356 6.498304 CAGCAGAGTTTACAACAAGATGTTT 58.502 36.000 0.00 0.00 38.77 2.83
1807 10357 5.506317 GCAGCAGAGTTTACAACAAGATGTT 60.506 40.000 0.00 0.00 42.08 2.71
1843 10406 1.287425 CATACGGACCGAAAAGAGGC 58.713 55.000 23.38 0.00 0.00 4.70
1844 10407 1.479323 TCCATACGGACCGAAAAGAGG 59.521 52.381 23.38 12.82 35.91 3.69
1845 10408 2.953466 TCCATACGGACCGAAAAGAG 57.047 50.000 23.38 4.00 35.91 2.85
1846 10409 2.498481 ACATCCATACGGACCGAAAAGA 59.502 45.455 23.38 12.11 46.79 2.52
1847 10410 2.864343 GACATCCATACGGACCGAAAAG 59.136 50.000 23.38 6.65 46.79 2.27
1848 10411 2.498481 AGACATCCATACGGACCGAAAA 59.502 45.455 23.38 5.81 46.79 2.29
1849 10412 2.104967 AGACATCCATACGGACCGAAA 58.895 47.619 23.38 8.65 46.79 3.46
1850 10413 1.407618 CAGACATCCATACGGACCGAA 59.592 52.381 23.38 0.33 46.79 4.30
1851 10414 1.029681 CAGACATCCATACGGACCGA 58.970 55.000 23.38 4.52 46.79 4.69
1852 10415 1.029681 TCAGACATCCATACGGACCG 58.970 55.000 13.61 13.61 46.79 4.79
2005 10571 1.299850 CGATTCGATGTGGCCGCTA 60.300 57.895 18.96 4.25 0.00 4.26
2071 10637 0.179234 TTCCTGCCGTCAGTGAACAA 59.821 50.000 0.00 0.00 38.66 2.83
2099 10665 7.822334 TCAATATGTTGGTAAATCTGAAGACGT 59.178 33.333 2.06 0.00 35.99 4.34
2123 10689 1.146774 TCCAAACCAAATGAGCCCTCA 59.853 47.619 0.00 0.00 44.59 3.86
2124 10690 1.923356 TCCAAACCAAATGAGCCCTC 58.077 50.000 0.00 0.00 0.00 4.30
2126 10692 2.247358 TCTTCCAAACCAAATGAGCCC 58.753 47.619 0.00 0.00 0.00 5.19
2127 10693 4.541973 AATCTTCCAAACCAAATGAGCC 57.458 40.909 0.00 0.00 0.00 4.70
2128 10694 5.990996 TGAAAATCTTCCAAACCAAATGAGC 59.009 36.000 0.00 0.00 0.00 4.26
2129 10695 9.362539 CTATGAAAATCTTCCAAACCAAATGAG 57.637 33.333 0.00 0.00 0.00 2.90
2130 10696 8.313292 CCTATGAAAATCTTCCAAACCAAATGA 58.687 33.333 0.00 0.00 0.00 2.57
2131 10697 7.550196 CCCTATGAAAATCTTCCAAACCAAATG 59.450 37.037 0.00 0.00 0.00 2.32
2132 10698 7.457535 TCCCTATGAAAATCTTCCAAACCAAAT 59.542 33.333 0.00 0.00 0.00 2.32
2133 10699 6.784969 TCCCTATGAAAATCTTCCAAACCAAA 59.215 34.615 0.00 0.00 0.00 3.28
2134 10700 6.318913 TCCCTATGAAAATCTTCCAAACCAA 58.681 36.000 0.00 0.00 0.00 3.67
2135 10701 5.898120 TCCCTATGAAAATCTTCCAAACCA 58.102 37.500 0.00 0.00 0.00 3.67
2136 10702 6.850752 TTCCCTATGAAAATCTTCCAAACC 57.149 37.500 0.00 0.00 0.00 3.27
2148 10714 7.396055 CCTTGTTCCTATGTTTTCCCTATGAAA 59.604 37.037 0.00 0.00 41.18 2.69
2149 10715 6.889722 CCTTGTTCCTATGTTTTCCCTATGAA 59.110 38.462 0.00 0.00 0.00 2.57
2150 10716 6.216662 TCCTTGTTCCTATGTTTTCCCTATGA 59.783 38.462 0.00 0.00 0.00 2.15
2151 10717 6.423182 TCCTTGTTCCTATGTTTTCCCTATG 58.577 40.000 0.00 0.00 0.00 2.23
2152 10718 6.652205 TCCTTGTTCCTATGTTTTCCCTAT 57.348 37.500 0.00 0.00 0.00 2.57
2153 10719 6.652205 ATCCTTGTTCCTATGTTTTCCCTA 57.348 37.500 0.00 0.00 0.00 3.53
2154 10720 5.536497 ATCCTTGTTCCTATGTTTTCCCT 57.464 39.130 0.00 0.00 0.00 4.20
2155 10721 6.605471 AAATCCTTGTTCCTATGTTTTCCC 57.395 37.500 0.00 0.00 0.00 3.97
2156 10722 6.322491 CGAAATCCTTGTTCCTATGTTTTCC 58.678 40.000 0.00 0.00 0.00 3.13
2157 10723 6.150474 TCCGAAATCCTTGTTCCTATGTTTTC 59.850 38.462 0.00 0.00 0.00 2.29
2158 10724 6.007703 TCCGAAATCCTTGTTCCTATGTTTT 58.992 36.000 0.00 0.00 0.00 2.43
2159 10725 5.566469 TCCGAAATCCTTGTTCCTATGTTT 58.434 37.500 0.00 0.00 0.00 2.83
2160 10726 5.174037 TCCGAAATCCTTGTTCCTATGTT 57.826 39.130 0.00 0.00 0.00 2.71
2161 10727 4.384208 CCTCCGAAATCCTTGTTCCTATGT 60.384 45.833 0.00 0.00 0.00 2.29
2162 10728 4.130118 CCTCCGAAATCCTTGTTCCTATG 58.870 47.826 0.00 0.00 0.00 2.23
2163 10729 4.037927 TCCTCCGAAATCCTTGTTCCTAT 58.962 43.478 0.00 0.00 0.00 2.57
2164 10730 3.446968 TCCTCCGAAATCCTTGTTCCTA 58.553 45.455 0.00 0.00 0.00 2.94
2165 10731 2.266279 TCCTCCGAAATCCTTGTTCCT 58.734 47.619 0.00 0.00 0.00 3.36
2166 10732 2.781681 TCCTCCGAAATCCTTGTTCC 57.218 50.000 0.00 0.00 0.00 3.62
2167 10733 5.644977 ATTTTCCTCCGAAATCCTTGTTC 57.355 39.130 0.00 0.00 37.81 3.18
2168 10734 6.419484 AAATTTTCCTCCGAAATCCTTGTT 57.581 33.333 0.00 0.00 37.81 2.83
2169 10735 6.267699 AGAAAATTTTCCTCCGAAATCCTTGT 59.732 34.615 24.01 0.58 37.81 3.16
2170 10736 6.691508 AGAAAATTTTCCTCCGAAATCCTTG 58.308 36.000 24.01 0.00 37.81 3.61
2171 10737 6.918067 AGAAAATTTTCCTCCGAAATCCTT 57.082 33.333 24.01 1.58 37.81 3.36
2172 10738 9.868160 ATATAGAAAATTTTCCTCCGAAATCCT 57.132 29.630 24.01 6.70 37.81 3.24
2177 10743 9.567776 TGCATATATAGAAAATTTTCCTCCGAA 57.432 29.630 24.01 9.02 37.92 4.30
2178 10744 9.739276 ATGCATATATAGAAAATTTTCCTCCGA 57.261 29.630 24.01 10.25 37.92 4.55
2190 10756 9.725019 CCTACAGACCAAATGCATATATAGAAA 57.275 33.333 0.00 0.00 0.00 2.52
2191 10757 9.100197 TCCTACAGACCAAATGCATATATAGAA 57.900 33.333 0.00 0.00 0.00 2.10
2192 10758 8.664669 TCCTACAGACCAAATGCATATATAGA 57.335 34.615 0.00 0.00 0.00 1.98
2193 10759 9.725019 TTTCCTACAGACCAAATGCATATATAG 57.275 33.333 0.00 0.00 0.00 1.31
2194 10760 9.502091 GTTTCCTACAGACCAAATGCATATATA 57.498 33.333 0.00 0.00 0.00 0.86
2195 10761 7.173218 CGTTTCCTACAGACCAAATGCATATAT 59.827 37.037 0.00 0.00 0.00 0.86
2196 10762 6.481976 CGTTTCCTACAGACCAAATGCATATA 59.518 38.462 0.00 0.00 0.00 0.86
2197 10763 5.296780 CGTTTCCTACAGACCAAATGCATAT 59.703 40.000 0.00 0.00 0.00 1.78
2198 10764 4.634004 CGTTTCCTACAGACCAAATGCATA 59.366 41.667 0.00 0.00 0.00 3.14
2199 10765 3.440173 CGTTTCCTACAGACCAAATGCAT 59.560 43.478 0.00 0.00 0.00 3.96
2200 10766 2.811431 CGTTTCCTACAGACCAAATGCA 59.189 45.455 0.00 0.00 0.00 3.96
2201 10767 2.414161 GCGTTTCCTACAGACCAAATGC 60.414 50.000 0.00 0.00 34.54 3.56
2202 10768 2.159707 CGCGTTTCCTACAGACCAAATG 60.160 50.000 0.00 0.00 0.00 2.32
2203 10769 2.073816 CGCGTTTCCTACAGACCAAAT 58.926 47.619 0.00 0.00 0.00 2.32
2204 10770 1.202557 ACGCGTTTCCTACAGACCAAA 60.203 47.619 5.58 0.00 0.00 3.28
2205 10771 0.390124 ACGCGTTTCCTACAGACCAA 59.610 50.000 5.58 0.00 0.00 3.67
2206 10772 1.068333 GTACGCGTTTCCTACAGACCA 60.068 52.381 20.78 0.00 0.00 4.02
2207 10773 1.068333 TGTACGCGTTTCCTACAGACC 60.068 52.381 20.78 0.00 0.00 3.85
2208 10774 2.336554 TGTACGCGTTTCCTACAGAC 57.663 50.000 20.78 6.56 0.00 3.51
2209 10775 2.488937 TCATGTACGCGTTTCCTACAGA 59.511 45.455 20.78 11.49 0.00 3.41
2210 10776 2.871133 TCATGTACGCGTTTCCTACAG 58.129 47.619 20.78 9.35 0.00 2.74
2211 10777 3.300852 TTCATGTACGCGTTTCCTACA 57.699 42.857 20.78 16.49 0.00 2.74
2212 10778 4.852609 AATTCATGTACGCGTTTCCTAC 57.147 40.909 20.78 10.05 0.00 3.18
2213 10779 4.031991 CGAAATTCATGTACGCGTTTCCTA 59.968 41.667 20.78 0.00 0.00 2.94
2214 10780 3.181524 CGAAATTCATGTACGCGTTTCCT 60.182 43.478 20.78 1.16 0.00 3.36
2215 10781 3.088552 CGAAATTCATGTACGCGTTTCC 58.911 45.455 20.78 6.70 0.00 3.13
2216 10782 3.728600 ACGAAATTCATGTACGCGTTTC 58.271 40.909 20.78 11.68 0.00 2.78
2217 10783 3.799137 ACGAAATTCATGTACGCGTTT 57.201 38.095 20.78 1.66 0.00 3.60
2218 10784 3.305094 CCTACGAAATTCATGTACGCGTT 59.695 43.478 20.78 0.00 0.00 4.84
2219 10785 2.855963 CCTACGAAATTCATGTACGCGT 59.144 45.455 19.17 19.17 0.00 6.01
2220 10786 3.110358 TCCTACGAAATTCATGTACGCG 58.890 45.455 3.53 3.53 0.00 6.01
2221 10787 5.432157 CATTCCTACGAAATTCATGTACGC 58.568 41.667 0.00 0.00 0.00 4.42
2222 10788 5.234329 AGCATTCCTACGAAATTCATGTACG 59.766 40.000 0.00 0.00 0.00 3.67
2223 10789 6.604735 AGCATTCCTACGAAATTCATGTAC 57.395 37.500 0.00 0.00 0.00 2.90
2224 10790 7.709269 GTAGCATTCCTACGAAATTCATGTA 57.291 36.000 0.00 0.00 37.30 2.29
2225 10791 6.604735 GTAGCATTCCTACGAAATTCATGT 57.395 37.500 0.00 0.00 37.30 3.21
2236 10802 6.595716 ACACAAGAAATGAGTAGCATTCCTAC 59.404 38.462 0.00 0.00 46.25 3.18
2237 10803 6.711277 ACACAAGAAATGAGTAGCATTCCTA 58.289 36.000 0.00 0.00 46.25 2.94
2238 10804 5.564550 ACACAAGAAATGAGTAGCATTCCT 58.435 37.500 0.00 0.00 46.25 3.36
2239 10805 5.886960 ACACAAGAAATGAGTAGCATTCC 57.113 39.130 0.00 0.00 46.25 3.01
2240 10806 8.579682 AAAAACACAAGAAATGAGTAGCATTC 57.420 30.769 0.00 0.00 46.25 2.67
2242 10808 8.299570 CCTAAAAACACAAGAAATGAGTAGCAT 58.700 33.333 0.00 0.00 39.43 3.79
2243 10809 7.255451 CCCTAAAAACACAAGAAATGAGTAGCA 60.255 37.037 0.00 0.00 32.16 3.49
2244 10810 7.040686 TCCCTAAAAACACAAGAAATGAGTAGC 60.041 37.037 0.00 0.00 32.16 3.58
2245 10811 8.391075 TCCCTAAAAACACAAGAAATGAGTAG 57.609 34.615 0.00 0.00 32.16 2.57
2246 10812 8.754991 TTCCCTAAAAACACAAGAAATGAGTA 57.245 30.769 0.00 0.00 32.16 2.59
2247 10813 7.654022 TTCCCTAAAAACACAAGAAATGAGT 57.346 32.000 0.00 0.00 34.01 3.41
2248 10814 8.197439 AGTTTCCCTAAAAACACAAGAAATGAG 58.803 33.333 2.73 0.00 40.77 2.90
2249 10815 8.073467 AGTTTCCCTAAAAACACAAGAAATGA 57.927 30.769 2.73 0.00 40.77 2.57
2250 10816 9.244799 GTAGTTTCCCTAAAAACACAAGAAATG 57.755 33.333 2.73 0.00 40.77 2.32
2251 10817 8.973182 TGTAGTTTCCCTAAAAACACAAGAAAT 58.027 29.630 2.73 0.00 40.77 2.17
2252 10818 8.245491 GTGTAGTTTCCCTAAAAACACAAGAAA 58.755 33.333 10.50 0.00 40.31 2.52
2253 10819 7.393796 TGTGTAGTTTCCCTAAAAACACAAGAA 59.606 33.333 13.63 0.00 43.58 2.52
2254 10820 6.885376 TGTGTAGTTTCCCTAAAAACACAAGA 59.115 34.615 13.63 0.00 43.58 3.02
2255 10821 7.090953 TGTGTAGTTTCCCTAAAAACACAAG 57.909 36.000 13.63 0.00 43.58 3.16
2256 10822 7.201839 GGATGTGTAGTTTCCCTAAAAACACAA 60.202 37.037 17.27 7.66 46.24 3.33
2257 10823 6.263617 GGATGTGTAGTTTCCCTAAAAACACA 59.736 38.462 16.35 16.35 46.67 3.72
2258 10824 6.263617 TGGATGTGTAGTTTCCCTAAAAACAC 59.736 38.462 2.73 9.25 40.77 3.32
2259 10825 6.366340 TGGATGTGTAGTTTCCCTAAAAACA 58.634 36.000 2.73 0.00 40.77 2.83
2260 10826 6.887626 TGGATGTGTAGTTTCCCTAAAAAC 57.112 37.500 0.00 0.00 39.03 2.43
2261 10827 7.726291 TGAATGGATGTGTAGTTTCCCTAAAAA 59.274 33.333 0.00 0.00 0.00 1.94
2262 10828 7.235079 TGAATGGATGTGTAGTTTCCCTAAAA 58.765 34.615 0.00 0.00 0.00 1.52
2263 10829 6.785076 TGAATGGATGTGTAGTTTCCCTAAA 58.215 36.000 0.00 0.00 0.00 1.85
2264 10830 6.381498 TGAATGGATGTGTAGTTTCCCTAA 57.619 37.500 0.00 0.00 0.00 2.69
2265 10831 6.381498 TTGAATGGATGTGTAGTTTCCCTA 57.619 37.500 0.00 0.00 0.00 3.53
2266 10832 4.927267 TGAATGGATGTGTAGTTTCCCT 57.073 40.909 0.00 0.00 0.00 4.20
2267 10833 5.622233 GCTTTGAATGGATGTGTAGTTTCCC 60.622 44.000 0.00 0.00 0.00 3.97
2268 10834 5.183904 AGCTTTGAATGGATGTGTAGTTTCC 59.816 40.000 0.00 0.00 0.00 3.13
2269 10835 6.072508 TGAGCTTTGAATGGATGTGTAGTTTC 60.073 38.462 0.00 0.00 0.00 2.78
2270 10836 5.769662 TGAGCTTTGAATGGATGTGTAGTTT 59.230 36.000 0.00 0.00 0.00 2.66
2271 10837 5.316167 TGAGCTTTGAATGGATGTGTAGTT 58.684 37.500 0.00 0.00 0.00 2.24
2272 10838 4.910195 TGAGCTTTGAATGGATGTGTAGT 58.090 39.130 0.00 0.00 0.00 2.73
2273 10839 6.446781 AATGAGCTTTGAATGGATGTGTAG 57.553 37.500 0.00 0.00 0.00 2.74
2274 10840 6.839124 AAATGAGCTTTGAATGGATGTGTA 57.161 33.333 0.00 0.00 0.00 2.90
2275 10841 5.733620 AAATGAGCTTTGAATGGATGTGT 57.266 34.783 0.00 0.00 0.00 3.72
2276 10842 5.163893 GCAAAATGAGCTTTGAATGGATGTG 60.164 40.000 0.00 0.00 38.35 3.21
2277 10843 4.933400 GCAAAATGAGCTTTGAATGGATGT 59.067 37.500 0.00 0.00 38.35 3.06
2278 10844 4.032445 CGCAAAATGAGCTTTGAATGGATG 59.968 41.667 0.00 0.00 38.35 3.51
2279 10845 4.178540 CGCAAAATGAGCTTTGAATGGAT 58.821 39.130 0.00 0.00 38.35 3.41
2280 10846 3.577667 CGCAAAATGAGCTTTGAATGGA 58.422 40.909 0.00 0.00 38.35 3.41
2281 10847 2.093152 GCGCAAAATGAGCTTTGAATGG 59.907 45.455 0.30 0.00 40.12 3.16
2282 10848 2.222420 CGCGCAAAATGAGCTTTGAATG 60.222 45.455 8.75 0.00 41.12 2.67
2283 10849 1.987770 CGCGCAAAATGAGCTTTGAAT 59.012 42.857 8.75 0.00 41.12 2.57
2284 10850 1.268999 ACGCGCAAAATGAGCTTTGAA 60.269 42.857 5.73 0.00 41.12 2.69
2285 10851 0.310543 ACGCGCAAAATGAGCTTTGA 59.689 45.000 5.73 0.00 41.12 2.69
2286 10852 1.906966 CTACGCGCAAAATGAGCTTTG 59.093 47.619 5.73 0.00 41.12 2.77
2287 10853 1.135689 CCTACGCGCAAAATGAGCTTT 60.136 47.619 5.73 0.00 41.12 3.51
2288 10854 0.447801 CCTACGCGCAAAATGAGCTT 59.552 50.000 5.73 0.00 41.12 3.74
2289 10855 0.391130 TCCTACGCGCAAAATGAGCT 60.391 50.000 5.73 0.00 41.12 4.09
2290 10856 0.446222 TTCCTACGCGCAAAATGAGC 59.554 50.000 5.73 0.00 39.86 4.26
2291 10857 1.526986 CGTTCCTACGCGCAAAATGAG 60.527 52.381 5.73 0.00 41.41 2.90
2292 10858 0.440758 CGTTCCTACGCGCAAAATGA 59.559 50.000 5.73 0.00 41.41 2.57
2293 10859 2.911198 CGTTCCTACGCGCAAAATG 58.089 52.632 5.73 0.00 41.41 2.32
2303 10869 2.450609 TTGACTTGCCTCGTTCCTAC 57.549 50.000 0.00 0.00 0.00 3.18
2304 10870 3.596214 GAATTGACTTGCCTCGTTCCTA 58.404 45.455 0.00 0.00 0.00 2.94
2305 10871 2.427506 GAATTGACTTGCCTCGTTCCT 58.572 47.619 0.00 0.00 0.00 3.36
2306 10872 1.468914 GGAATTGACTTGCCTCGTTCC 59.531 52.381 0.00 0.00 0.00 3.62
2307 10873 2.427506 AGGAATTGACTTGCCTCGTTC 58.572 47.619 0.00 0.00 0.00 3.95
2308 10874 2.568623 AGGAATTGACTTGCCTCGTT 57.431 45.000 0.00 0.00 0.00 3.85
2309 10875 2.568623 AAGGAATTGACTTGCCTCGT 57.431 45.000 0.00 0.00 0.00 4.18
2310 10876 4.253685 TCTTAAGGAATTGACTTGCCTCG 58.746 43.478 1.85 0.00 0.00 4.63
2311 10877 5.067023 CCATCTTAAGGAATTGACTTGCCTC 59.933 44.000 1.85 0.00 0.00 4.70
2312 10878 4.952335 CCATCTTAAGGAATTGACTTGCCT 59.048 41.667 1.85 0.00 0.00 4.75
2313 10879 4.440663 GCCATCTTAAGGAATTGACTTGCC 60.441 45.833 1.85 0.00 0.00 4.52
2314 10880 4.158394 TGCCATCTTAAGGAATTGACTTGC 59.842 41.667 1.85 0.00 0.00 4.01
2315 10881 5.902613 TGCCATCTTAAGGAATTGACTTG 57.097 39.130 1.85 0.00 0.00 3.16
2316 10882 6.012745 AGTTGCCATCTTAAGGAATTGACTT 58.987 36.000 1.85 0.00 0.00 3.01
2317 10883 5.574188 AGTTGCCATCTTAAGGAATTGACT 58.426 37.500 1.85 0.00 0.00 3.41
2318 10884 5.904362 AGTTGCCATCTTAAGGAATTGAC 57.096 39.130 1.85 0.00 0.00 3.18
2319 10885 5.185635 CCAAGTTGCCATCTTAAGGAATTGA 59.814 40.000 1.85 0.00 0.00 2.57
2320 10886 5.413499 CCAAGTTGCCATCTTAAGGAATTG 58.587 41.667 1.85 0.00 0.00 2.32
2321 10887 4.081476 GCCAAGTTGCCATCTTAAGGAATT 60.081 41.667 1.85 0.00 0.00 2.17
2322 10888 3.448660 GCCAAGTTGCCATCTTAAGGAAT 59.551 43.478 1.85 0.00 0.00 3.01
2323 10889 2.825532 GCCAAGTTGCCATCTTAAGGAA 59.174 45.455 1.85 0.00 0.00 3.36
2324 10890 2.224992 TGCCAAGTTGCCATCTTAAGGA 60.225 45.455 1.85 0.00 0.00 3.36
2325 10891 2.170166 TGCCAAGTTGCCATCTTAAGG 58.830 47.619 1.85 0.00 0.00 2.69
2326 10892 3.256631 ACTTGCCAAGTTGCCATCTTAAG 59.743 43.478 3.74 0.00 39.04 1.85
2327 10893 3.005684 CACTTGCCAAGTTGCCATCTTAA 59.994 43.478 7.51 0.00 40.46 1.85
2328 10894 2.557924 CACTTGCCAAGTTGCCATCTTA 59.442 45.455 7.51 0.00 40.46 2.10
2329 10895 1.342174 CACTTGCCAAGTTGCCATCTT 59.658 47.619 7.51 0.00 40.46 2.40
2330 10896 0.963962 CACTTGCCAAGTTGCCATCT 59.036 50.000 7.51 0.00 40.46 2.90
2331 10897 0.675633 ACACTTGCCAAGTTGCCATC 59.324 50.000 7.51 0.00 40.46 3.51
2332 10898 0.675633 GACACTTGCCAAGTTGCCAT 59.324 50.000 7.51 0.00 40.46 4.40
2333 10899 0.682532 TGACACTTGCCAAGTTGCCA 60.683 50.000 7.51 3.43 40.46 4.92
2334 10900 0.675633 ATGACACTTGCCAAGTTGCC 59.324 50.000 7.51 0.72 40.46 4.52
2335 10901 1.336240 GGATGACACTTGCCAAGTTGC 60.336 52.381 7.51 3.47 40.46 4.17
2336 10902 2.233271 AGGATGACACTTGCCAAGTTG 58.767 47.619 7.51 6.43 40.46 3.16
2337 10903 2.664402 AGGATGACACTTGCCAAGTT 57.336 45.000 7.51 0.00 40.46 2.66
2338 10904 4.307032 AATAGGATGACACTTGCCAAGT 57.693 40.909 3.74 3.74 44.06 3.16
2339 10905 6.757897 TTTAATAGGATGACACTTGCCAAG 57.242 37.500 2.11 2.11 0.00 3.61
2340 10906 7.147915 GGAATTTAATAGGATGACACTTGCCAA 60.148 37.037 0.00 0.00 0.00 4.52
2341 10907 6.321181 GGAATTTAATAGGATGACACTTGCCA 59.679 38.462 0.00 0.00 0.00 4.92
2342 10908 6.547510 AGGAATTTAATAGGATGACACTTGCC 59.452 38.462 0.00 0.00 0.00 4.52
2343 10909 7.573968 AGGAATTTAATAGGATGACACTTGC 57.426 36.000 0.00 0.00 0.00 4.01
2362 10928 9.683870 CGTAGGAATTAGGAGTAGTATAGGAAT 57.316 37.037 0.00 0.00 0.00 3.01
2363 10929 8.664079 ACGTAGGAATTAGGAGTAGTATAGGAA 58.336 37.037 0.00 0.00 0.00 3.36
2364 10930 8.212259 ACGTAGGAATTAGGAGTAGTATAGGA 57.788 38.462 0.00 0.00 0.00 2.94
2365 10931 8.860780 AACGTAGGAATTAGGAGTAGTATAGG 57.139 38.462 0.00 0.00 0.00 2.57
2367 10933 8.993121 CGAAACGTAGGAATTAGGAGTAGTATA 58.007 37.037 0.00 0.00 0.00 1.47
2368 10934 7.716998 TCGAAACGTAGGAATTAGGAGTAGTAT 59.283 37.037 0.00 0.00 0.00 2.12
2369 10935 7.047891 TCGAAACGTAGGAATTAGGAGTAGTA 58.952 38.462 0.00 0.00 0.00 1.82
2370 10936 5.882557 TCGAAACGTAGGAATTAGGAGTAGT 59.117 40.000 0.00 0.00 0.00 2.73
2371 10937 6.369059 TCGAAACGTAGGAATTAGGAGTAG 57.631 41.667 0.00 0.00 0.00 2.57
2372 10938 6.949352 ATCGAAACGTAGGAATTAGGAGTA 57.051 37.500 0.00 0.00 0.00 2.59
2373 10939 5.848833 ATCGAAACGTAGGAATTAGGAGT 57.151 39.130 0.00 0.00 0.00 3.85
2374 10940 6.200475 GGAAATCGAAACGTAGGAATTAGGAG 59.800 42.308 0.00 0.00 0.00 3.69
2375 10941 6.044682 GGAAATCGAAACGTAGGAATTAGGA 58.955 40.000 0.00 0.00 0.00 2.94
2376 10942 6.047231 AGGAAATCGAAACGTAGGAATTAGG 58.953 40.000 0.00 0.00 0.00 2.69
2377 10943 6.200475 GGAGGAAATCGAAACGTAGGAATTAG 59.800 42.308 0.00 0.00 0.00 1.73
2378 10944 6.044682 GGAGGAAATCGAAACGTAGGAATTA 58.955 40.000 0.00 0.00 0.00 1.40
2379 10945 4.874396 GGAGGAAATCGAAACGTAGGAATT 59.126 41.667 0.00 0.00 0.00 2.17
2380 10946 4.081309 TGGAGGAAATCGAAACGTAGGAAT 60.081 41.667 0.00 0.00 0.00 3.01
2381 10947 3.258872 TGGAGGAAATCGAAACGTAGGAA 59.741 43.478 0.00 0.00 0.00 3.36
2382 10948 2.827322 TGGAGGAAATCGAAACGTAGGA 59.173 45.455 0.00 0.00 0.00 2.94
2383 10949 3.241067 TGGAGGAAATCGAAACGTAGG 57.759 47.619 0.00 0.00 0.00 3.18
2384 10950 5.379827 GTTTTGGAGGAAATCGAAACGTAG 58.620 41.667 0.00 0.00 35.62 3.51
2385 10951 4.213906 GGTTTTGGAGGAAATCGAAACGTA 59.786 41.667 0.00 0.00 35.62 3.57
2386 10952 3.004002 GGTTTTGGAGGAAATCGAAACGT 59.996 43.478 0.00 0.00 35.62 3.99
2387 10953 3.561503 GGTTTTGGAGGAAATCGAAACG 58.438 45.455 0.00 0.00 35.62 3.60
2388 10954 3.251487 TCGGTTTTGGAGGAAATCGAAAC 59.749 43.478 3.52 0.00 45.83 2.78
2389 10955 3.478509 TCGGTTTTGGAGGAAATCGAAA 58.521 40.909 3.52 0.00 45.83 3.46
2390 10956 3.128852 TCGGTTTTGGAGGAAATCGAA 57.871 42.857 3.52 0.00 45.83 3.71
2391 10957 2.843401 TCGGTTTTGGAGGAAATCGA 57.157 45.000 1.99 1.99 46.41 3.59
2392 10958 3.438781 TCATTCGGTTTTGGAGGAAATCG 59.561 43.478 0.00 0.00 42.78 3.34
2393 10959 4.675408 GCTCATTCGGTTTTGGAGGAAATC 60.675 45.833 0.00 0.00 0.00 2.17
2394 10960 3.193479 GCTCATTCGGTTTTGGAGGAAAT 59.807 43.478 0.00 0.00 0.00 2.17
2395 10961 2.556622 GCTCATTCGGTTTTGGAGGAAA 59.443 45.455 0.00 0.00 0.00 3.13
2396 10962 2.159382 GCTCATTCGGTTTTGGAGGAA 58.841 47.619 0.00 0.00 0.00 3.36
2397 10963 1.613255 GGCTCATTCGGTTTTGGAGGA 60.613 52.381 0.00 0.00 0.00 3.71
2398 10964 0.811281 GGCTCATTCGGTTTTGGAGG 59.189 55.000 0.00 0.00 0.00 4.30
2399 10965 0.811281 GGGCTCATTCGGTTTTGGAG 59.189 55.000 0.00 0.00 0.00 3.86
2400 10966 0.404040 AGGGCTCATTCGGTTTTGGA 59.596 50.000 0.00 0.00 0.00 3.53
2401 10967 0.527565 CAGGGCTCATTCGGTTTTGG 59.472 55.000 0.00 0.00 0.00 3.28
2402 10968 1.533625 TCAGGGCTCATTCGGTTTTG 58.466 50.000 0.00 0.00 0.00 2.44
2403 10969 1.886542 GTTCAGGGCTCATTCGGTTTT 59.113 47.619 0.00 0.00 0.00 2.43
2404 10970 1.073923 AGTTCAGGGCTCATTCGGTTT 59.926 47.619 0.00 0.00 0.00 3.27
2405 10971 0.693049 AGTTCAGGGCTCATTCGGTT 59.307 50.000 0.00 0.00 0.00 4.44
2406 10972 0.693049 AAGTTCAGGGCTCATTCGGT 59.307 50.000 0.00 0.00 0.00 4.69
2407 10973 1.826385 AAAGTTCAGGGCTCATTCGG 58.174 50.000 0.00 0.00 0.00 4.30
2408 10974 3.568538 CAAAAAGTTCAGGGCTCATTCG 58.431 45.455 0.00 0.00 0.00 3.34
2409 10975 3.006217 AGCAAAAAGTTCAGGGCTCATTC 59.994 43.478 0.00 0.00 0.00 2.67
2410 10976 2.967887 AGCAAAAAGTTCAGGGCTCATT 59.032 40.909 0.00 0.00 0.00 2.57
2411 10977 2.298163 CAGCAAAAAGTTCAGGGCTCAT 59.702 45.455 0.00 0.00 0.00 2.90
2412 10978 1.682854 CAGCAAAAAGTTCAGGGCTCA 59.317 47.619 0.00 0.00 0.00 4.26
2413 10979 1.000171 CCAGCAAAAAGTTCAGGGCTC 60.000 52.381 0.00 0.00 0.00 4.70
2414 10980 1.043022 CCAGCAAAAAGTTCAGGGCT 58.957 50.000 0.00 0.00 0.00 5.19
2415 10981 1.000171 CTCCAGCAAAAAGTTCAGGGC 60.000 52.381 0.00 0.00 0.00 5.19
2416 10982 1.000171 GCTCCAGCAAAAAGTTCAGGG 60.000 52.381 0.00 0.00 41.59 4.45
2417 10983 1.959282 AGCTCCAGCAAAAAGTTCAGG 59.041 47.619 0.48 0.00 45.16 3.86
2418 10984 2.620115 TCAGCTCCAGCAAAAAGTTCAG 59.380 45.455 0.48 0.00 45.16 3.02
2419 10985 2.653726 TCAGCTCCAGCAAAAAGTTCA 58.346 42.857 0.48 0.00 45.16 3.18
2420 10986 3.181487 TGTTCAGCTCCAGCAAAAAGTTC 60.181 43.478 0.48 0.00 45.16 3.01
2421 10987 2.760092 TGTTCAGCTCCAGCAAAAAGTT 59.240 40.909 0.48 0.00 45.16 2.66
2422 10988 2.099756 GTGTTCAGCTCCAGCAAAAAGT 59.900 45.455 0.48 0.00 45.16 2.66
2423 10989 2.360165 AGTGTTCAGCTCCAGCAAAAAG 59.640 45.455 0.48 0.00 45.16 2.27
2424 10990 2.378038 AGTGTTCAGCTCCAGCAAAAA 58.622 42.857 0.48 0.00 45.16 1.94
2430 10996 3.057946 GCCTAAAAAGTGTTCAGCTCCAG 60.058 47.826 0.00 0.00 0.00 3.86
2470 11036 5.240183 ACAGATGAAGGACAATGTTCTTGTG 59.760 40.000 12.31 6.42 30.57 3.33
2475 11041 7.202526 TGAAAAACAGATGAAGGACAATGTTC 58.797 34.615 0.00 0.00 39.69 3.18
2476 11042 7.111247 TGAAAAACAGATGAAGGACAATGTT 57.889 32.000 0.00 0.00 41.16 2.71
2481 11052 4.644234 TGCTTGAAAAACAGATGAAGGACA 59.356 37.500 0.00 0.00 0.00 4.02
2493 11064 8.045176 AGACCATATAAGTCTGCTTGAAAAAC 57.955 34.615 7.75 0.00 42.94 2.43
2507 11137 9.832445 AACACTGGTTTATGTAGACCATATAAG 57.168 33.333 3.23 0.00 44.43 1.73
2521 11151 7.014230 ACAGAGCATACAAAAACACTGGTTTAT 59.986 33.333 0.00 0.00 46.20 1.40
2522 11152 6.320164 ACAGAGCATACAAAAACACTGGTTTA 59.680 34.615 0.00 0.00 46.20 2.01
2524 11154 4.644685 ACAGAGCATACAAAAACACTGGTT 59.355 37.500 0.00 0.00 39.43 3.67
2525 11155 4.207165 ACAGAGCATACAAAAACACTGGT 58.793 39.130 0.00 0.00 0.00 4.00
2526 11156 4.836125 ACAGAGCATACAAAAACACTGG 57.164 40.909 0.00 0.00 0.00 4.00
2527 11157 6.197096 GTGAAACAGAGCATACAAAAACACTG 59.803 38.462 0.00 0.00 36.32 3.66
2528 11158 6.265577 GTGAAACAGAGCATACAAAAACACT 58.734 36.000 0.00 0.00 36.32 3.55
2529 11159 5.458779 GGTGAAACAGAGCATACAAAAACAC 59.541 40.000 0.00 0.00 39.98 3.32
2530 11160 5.359576 AGGTGAAACAGAGCATACAAAAACA 59.640 36.000 0.00 0.00 39.98 2.83
2531 11161 5.831997 AGGTGAAACAGAGCATACAAAAAC 58.168 37.500 0.00 0.00 39.98 2.43
2532 11162 6.016610 GGTAGGTGAAACAGAGCATACAAAAA 60.017 38.462 0.00 0.00 39.98 1.94
2533 11163 5.472137 GGTAGGTGAAACAGAGCATACAAAA 59.528 40.000 0.00 0.00 39.98 2.44
2534 11164 5.001232 GGTAGGTGAAACAGAGCATACAAA 58.999 41.667 0.00 0.00 39.98 2.83
2535 11165 4.041075 TGGTAGGTGAAACAGAGCATACAA 59.959 41.667 0.00 0.00 39.98 2.41
2536 11166 3.580895 TGGTAGGTGAAACAGAGCATACA 59.419 43.478 0.00 0.00 39.98 2.29
2537 11167 4.202245 TGGTAGGTGAAACAGAGCATAC 57.798 45.455 0.00 0.00 39.98 2.39
2542 11172 2.026822 AGCCATGGTAGGTGAAACAGAG 60.027 50.000 14.67 0.00 39.98 3.35
2635 11265 8.846943 TTCTTTCTGCTGTGTTCTATAATTGA 57.153 30.769 0.00 0.00 0.00 2.57
2641 11271 9.507329 TTTTAGATTCTTTCTGCTGTGTTCTAT 57.493 29.630 0.00 0.00 35.79 1.98
2642 11272 8.902540 TTTTAGATTCTTTCTGCTGTGTTCTA 57.097 30.769 0.00 0.00 35.79 2.10
2651 11281 9.301153 TGTGTTTTTCTTTTAGATTCTTTCTGC 57.699 29.630 0.00 0.00 35.79 4.26
2672 11302 0.755327 GGGGCACTTCCTGTTGTGTT 60.755 55.000 0.00 0.00 36.63 3.32
2679 11309 1.415659 CTCTGATAGGGGCACTTCCTG 59.584 57.143 0.00 0.00 35.92 3.86
2688 11318 5.620738 TCTTTTGATGACTCTGATAGGGG 57.379 43.478 0.00 0.00 0.00 4.79
2697 11327 3.157087 TGGCCCTTTCTTTTGATGACTC 58.843 45.455 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.