Multiple sequence alignment - TraesCS1D01G364000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G364000 chr1D 100.000 3005 0 0 1 3005 445245543 445248547 0.000000e+00 5550.0
1 TraesCS1D01G364000 chr1D 85.273 1100 114 31 1186 2254 445286798 445287880 0.000000e+00 1090.0
2 TraesCS1D01G364000 chr1D 81.715 793 106 21 1535 2312 445263730 445264498 2.540000e-175 625.0
3 TraesCS1D01G364000 chr1D 86.037 487 56 10 113 596 49933254 49933731 2.070000e-141 512.0
4 TraesCS1D01G364000 chr1D 87.584 298 16 8 694 971 445285834 445286130 2.890000e-85 326.0
5 TraesCS1D01G364000 chr1D 95.455 176 8 0 1000 1175 445286224 445286399 6.340000e-72 281.0
6 TraesCS1D01G364000 chr1D 93.785 177 8 3 1001 1174 445326307 445326131 2.300000e-66 263.0
7 TraesCS1D01G364000 chr1D 91.111 45 1 3 970 1012 445286147 445286190 1.160000e-04 58.4
8 TraesCS1D01G364000 chr1A 95.879 1820 73 2 1186 3004 541147057 541148875 0.000000e+00 2944.0
9 TraesCS1D01G364000 chr1A 84.937 1029 107 27 1221 2227 541163991 541164993 0.000000e+00 998.0
10 TraesCS1D01G364000 chr1A 77.306 943 132 47 1223 2134 542173973 542173082 5.830000e-132 481.0
11 TraesCS1D01G364000 chr1A 80.077 522 81 12 1228 1748 541399244 541398745 1.700000e-97 366.0
12 TraesCS1D01G364000 chr1A 97.701 174 4 0 1001 1174 541146495 541146668 1.750000e-77 300.0
13 TraesCS1D01G364000 chr1A 87.984 258 23 3 716 969 541146121 541146374 6.300000e-77 298.0
14 TraesCS1D01G364000 chr1A 92.308 182 8 1 1001 1176 541399871 541399690 1.380000e-63 254.0
15 TraesCS1D01G364000 chr1A 81.928 249 26 10 2371 2603 21712969 21713214 3.060000e-45 193.0
16 TraesCS1D01G364000 chr1A 92.683 123 9 0 1 123 541144884 541145006 8.560000e-41 178.0
17 TraesCS1D01G364000 chr1A 78.764 259 27 15 2343 2583 548731640 548731888 6.710000e-32 148.0
18 TraesCS1D01G364000 chr1A 95.946 74 3 0 587 660 541144998 541145071 1.460000e-23 121.0
19 TraesCS1D01G364000 chr1A 80.000 175 19 11 1011 1171 542181135 542180963 6.810000e-22 115.0
20 TraesCS1D01G364000 chr1A 97.619 42 1 0 692 733 541145464 541145505 4.160000e-09 73.1
21 TraesCS1D01G364000 chr1B 86.553 937 89 22 1198 2126 610970594 610969687 0.000000e+00 998.0
22 TraesCS1D01G364000 chr1B 85.623 939 106 18 1225 2153 608421571 608422490 0.000000e+00 959.0
23 TraesCS1D01G364000 chr1B 85.623 939 106 18 1225 2153 608440064 608440983 0.000000e+00 959.0
24 TraesCS1D01G364000 chr1B 85.517 939 107 18 1225 2153 608403423 608404342 0.000000e+00 953.0
25 TraesCS1D01G364000 chr1B 82.013 934 121 30 1228 2151 606849400 606848504 0.000000e+00 750.0
26 TraesCS1D01G364000 chr1B 86.966 468 56 2 123 590 288501248 288500786 3.430000e-144 521.0
27 TraesCS1D01G364000 chr1B 82.081 346 24 15 865 1174 606850044 606849701 8.260000e-66 261.0
28 TraesCS1D01G364000 chr1B 82.955 264 29 6 2363 2610 597079818 597080081 1.080000e-54 224.0
29 TraesCS1D01G364000 chr1B 82.156 269 29 13 2364 2616 680192420 680192685 2.350000e-51 213.0
30 TraesCS1D01G364000 chr1B 83.117 231 30 7 2686 2914 606850470 606850247 5.080000e-48 202.0
31 TraesCS1D01G364000 chr1B 85.119 168 16 3 1013 1174 610971818 610971654 2.400000e-36 163.0
32 TraesCS1D01G364000 chr1B 91.667 84 6 1 1091 1174 608380109 608380191 6.810000e-22 115.0
33 TraesCS1D01G364000 chr2A 88.172 465 47 5 124 587 14513925 14514382 5.660000e-152 547.0
34 TraesCS1D01G364000 chr2A 82.239 259 36 9 2364 2616 209573361 209573615 6.520000e-52 215.0
35 TraesCS1D01G364000 chr2A 79.008 262 38 13 2364 2609 27092677 27092417 2.400000e-36 163.0
36 TraesCS1D01G364000 chr7A 87.957 465 51 2 123 587 35161787 35161328 7.330000e-151 544.0
37 TraesCS1D01G364000 chr7A 82.857 245 24 8 2376 2603 635078831 635079074 1.410000e-48 204.0
38 TraesCS1D01G364000 chr7D 87.500 464 49 7 125 587 575618442 575618897 7.380000e-146 527.0
39 TraesCS1D01G364000 chr7D 87.366 467 48 9 124 587 382337435 382336977 2.650000e-145 525.0
40 TraesCS1D01G364000 chr7D 83.922 255 24 7 2365 2603 388720005 388720258 8.380000e-56 228.0
41 TraesCS1D01G364000 chr7B 87.124 466 53 4 124 587 631795703 631795243 3.430000e-144 521.0
42 TraesCS1D01G364000 chr7B 82.283 254 25 8 2365 2603 383859148 383859396 5.080000e-48 202.0
43 TraesCS1D01G364000 chrUn 87.339 466 44 11 124 587 27991450 27990998 1.230000e-143 520.0
44 TraesCS1D01G364000 chr6B 87.069 464 54 3 124 587 518425191 518424734 1.230000e-143 520.0
45 TraesCS1D01G364000 chr6B 84.959 246 19 7 2375 2603 715838419 715838663 1.800000e-57 233.0
46 TraesCS1D01G364000 chr6B 86.885 61 8 0 4 64 478904117 478904177 5.380000e-08 69.4
47 TraesCS1D01G364000 chr5A 82.443 262 29 7 2365 2610 130535515 130535255 2.350000e-51 213.0
48 TraesCS1D01G364000 chr4A 81.343 268 29 14 2362 2611 73999698 73999434 6.570000e-47 198.0
49 TraesCS1D01G364000 chr3D 78.431 255 39 8 2364 2602 415660540 415660794 5.190000e-33 152.0
50 TraesCS1D01G364000 chr6A 86.813 91 12 0 4 94 611825374 611825464 5.300000e-18 102.0
51 TraesCS1D01G364000 chr2B 90.909 66 5 1 1106 1171 736409984 736409920 1.480000e-13 87.9
52 TraesCS1D01G364000 chr3B 84.127 63 10 0 33 95 598908298 598908360 8.990000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G364000 chr1D 445245543 445248547 3004 False 5550.000000 5550 100.000000 1 3005 1 chr1D.!!$F2 3004
1 TraesCS1D01G364000 chr1D 445263730 445264498 768 False 625.000000 625 81.715000 1535 2312 1 chr1D.!!$F3 777
2 TraesCS1D01G364000 chr1D 445285834 445287880 2046 False 438.850000 1090 89.855750 694 2254 4 chr1D.!!$F4 1560
3 TraesCS1D01G364000 chr1A 541163991 541164993 1002 False 998.000000 998 84.937000 1221 2227 1 chr1A.!!$F2 1006
4 TraesCS1D01G364000 chr1A 541144884 541148875 3991 False 652.350000 2944 94.635333 1 3004 6 chr1A.!!$F4 3003
5 TraesCS1D01G364000 chr1A 542173082 542173973 891 True 481.000000 481 77.306000 1223 2134 1 chr1A.!!$R1 911
6 TraesCS1D01G364000 chr1A 541398745 541399871 1126 True 310.000000 366 86.192500 1001 1748 2 chr1A.!!$R3 747
7 TraesCS1D01G364000 chr1B 608421571 608422490 919 False 959.000000 959 85.623000 1225 2153 1 chr1B.!!$F4 928
8 TraesCS1D01G364000 chr1B 608440064 608440983 919 False 959.000000 959 85.623000 1225 2153 1 chr1B.!!$F5 928
9 TraesCS1D01G364000 chr1B 608403423 608404342 919 False 953.000000 953 85.517000 1225 2153 1 chr1B.!!$F3 928
10 TraesCS1D01G364000 chr1B 610969687 610971818 2131 True 580.500000 998 85.836000 1013 2126 2 chr1B.!!$R3 1113
11 TraesCS1D01G364000 chr1B 606848504 606850470 1966 True 404.333333 750 82.403667 865 2914 3 chr1B.!!$R2 2049

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
889 1908 0.030235 GCTGGTCGTTGGTGGTTTTC 59.97 55.0 0.0 0.0 0.0 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2817 5129 0.174617 CCTCACTCGGCCTTTCTCTC 59.825 60.0 0.0 0.0 0.0 3.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.951229 AGGTGGTCTACAAACTTGGG 57.049 50.000 0.00 0.00 0.00 4.12
34 35 2.132686 AGGTGGTCTACAAACTTGGGT 58.867 47.619 0.00 0.00 0.00 4.51
79 80 3.462483 TGTACAACCGTGACAGTTGAT 57.538 42.857 17.69 5.56 46.03 2.57
83 84 3.476552 ACAACCGTGACAGTTGATGATT 58.523 40.909 17.69 0.00 46.03 2.57
90 91 4.442403 CGTGACAGTTGATGATTAGATCGG 59.558 45.833 0.00 0.00 0.00 4.18
131 132 8.610248 AAAATGATGATCAAAAGCATTGTTCA 57.390 26.923 14.53 14.53 29.90 3.18
132 133 7.591006 AATGATGATCAAAAGCATTGTTCAC 57.409 32.000 14.49 10.72 32.84 3.18
133 134 5.155643 TGATGATCAAAAGCATTGTTCACG 58.844 37.500 14.49 0.00 32.84 4.35
136 137 5.586339 TGATCAAAAGCATTGTTCACGAAA 58.414 33.333 10.31 0.00 0.00 3.46
137 138 6.215121 TGATCAAAAGCATTGTTCACGAAAT 58.785 32.000 10.31 0.00 0.00 2.17
140 141 2.900122 AGCATTGTTCACGAAATCGG 57.100 45.000 7.81 0.00 44.95 4.18
141 142 2.151202 AGCATTGTTCACGAAATCGGT 58.849 42.857 7.81 0.00 44.95 4.69
142 143 3.331150 AGCATTGTTCACGAAATCGGTA 58.669 40.909 7.81 0.00 44.95 4.02
143 144 3.749088 AGCATTGTTCACGAAATCGGTAA 59.251 39.130 7.81 0.00 44.95 2.85
144 145 3.844099 GCATTGTTCACGAAATCGGTAAC 59.156 43.478 7.81 10.75 44.95 2.50
145 146 4.378046 GCATTGTTCACGAAATCGGTAACT 60.378 41.667 17.46 3.00 44.95 2.24
146 147 4.718858 TTGTTCACGAAATCGGTAACTG 57.281 40.909 17.46 4.70 44.95 3.16
147 148 3.061322 TGTTCACGAAATCGGTAACTGG 58.939 45.455 17.46 0.00 44.95 4.00
148 149 3.062042 GTTCACGAAATCGGTAACTGGT 58.938 45.455 7.81 0.00 44.95 4.00
150 151 4.100707 TCACGAAATCGGTAACTGGTAG 57.899 45.455 7.81 0.00 44.95 3.18
152 153 2.494870 ACGAAATCGGTAACTGGTAGCT 59.505 45.455 7.81 0.00 44.95 3.32
155 156 4.201990 CGAAATCGGTAACTGGTAGCTACT 60.202 45.833 22.74 6.23 35.37 2.57
156 157 4.915158 AATCGGTAACTGGTAGCTACTC 57.085 45.455 22.74 13.53 0.00 2.59
157 158 2.283298 TCGGTAACTGGTAGCTACTCG 58.717 52.381 22.74 15.74 0.00 4.18
158 159 2.093500 TCGGTAACTGGTAGCTACTCGA 60.093 50.000 22.74 15.90 0.00 4.04
159 160 2.877168 CGGTAACTGGTAGCTACTCGAT 59.123 50.000 22.74 11.33 0.00 3.59
160 161 3.059051 CGGTAACTGGTAGCTACTCGATC 60.059 52.174 22.74 6.96 0.00 3.69
161 162 3.059051 GGTAACTGGTAGCTACTCGATCG 60.059 52.174 22.74 9.36 0.00 3.69
162 163 1.595466 ACTGGTAGCTACTCGATCGG 58.405 55.000 22.74 13.04 0.00 4.18
163 164 0.238817 CTGGTAGCTACTCGATCGGC 59.761 60.000 22.74 10.68 0.00 5.54
164 165 0.179026 TGGTAGCTACTCGATCGGCT 60.179 55.000 22.74 17.56 38.62 5.52
165 166 0.953003 GGTAGCTACTCGATCGGCTT 59.047 55.000 22.74 5.72 36.40 4.35
166 167 1.335142 GGTAGCTACTCGATCGGCTTG 60.335 57.143 22.74 8.83 36.40 4.01
167 168 1.602851 GTAGCTACTCGATCGGCTTGA 59.397 52.381 19.27 2.77 36.40 3.02
168 169 0.665835 AGCTACTCGATCGGCTTGAG 59.334 55.000 16.41 7.26 40.75 3.02
169 170 0.663688 GCTACTCGATCGGCTTGAGA 59.336 55.000 16.41 0.00 37.55 3.27
170 171 1.334599 GCTACTCGATCGGCTTGAGAG 60.335 57.143 16.41 5.71 37.55 3.20
172 173 2.039818 ACTCGATCGGCTTGAGAGTA 57.960 50.000 16.41 0.00 40.00 2.59
173 174 1.944024 ACTCGATCGGCTTGAGAGTAG 59.056 52.381 16.41 3.39 40.00 2.57
175 176 1.671328 TCGATCGGCTTGAGAGTAGTG 59.329 52.381 16.41 0.00 0.00 2.74
176 177 1.671328 CGATCGGCTTGAGAGTAGTGA 59.329 52.381 7.38 0.00 0.00 3.41
177 178 2.292016 CGATCGGCTTGAGAGTAGTGAT 59.708 50.000 7.38 0.00 0.00 3.06
178 179 3.243234 CGATCGGCTTGAGAGTAGTGATT 60.243 47.826 7.38 0.00 0.00 2.57
179 180 4.023963 CGATCGGCTTGAGAGTAGTGATTA 60.024 45.833 7.38 0.00 0.00 1.75
180 181 5.505819 CGATCGGCTTGAGAGTAGTGATTAA 60.506 44.000 7.38 0.00 0.00 1.40
182 183 5.833082 TCGGCTTGAGAGTAGTGATTAATC 58.167 41.667 8.60 8.60 0.00 1.75
183 184 5.359860 TCGGCTTGAGAGTAGTGATTAATCA 59.640 40.000 14.23 14.23 0.00 2.57
184 185 5.689514 CGGCTTGAGAGTAGTGATTAATCAG 59.310 44.000 18.47 4.27 37.51 2.90
185 186 6.578023 GGCTTGAGAGTAGTGATTAATCAGT 58.422 40.000 25.22 25.22 42.71 3.41
186 187 6.478344 GGCTTGAGAGTAGTGATTAATCAGTG 59.522 42.308 28.54 14.51 40.49 3.66
187 188 7.261325 GCTTGAGAGTAGTGATTAATCAGTGA 58.739 38.462 28.54 14.23 40.49 3.41
189 190 9.814899 CTTGAGAGTAGTGATTAATCAGTGAAT 57.185 33.333 28.54 17.21 40.49 2.57
190 191 9.809096 TTGAGAGTAGTGATTAATCAGTGAATC 57.191 33.333 28.54 22.48 40.49 2.52
191 192 8.131731 TGAGAGTAGTGATTAATCAGTGAATCG 58.868 37.037 28.54 0.00 40.49 3.34
193 194 5.986135 AGTAGTGATTAATCAGTGAATCGGC 59.014 40.000 28.54 11.23 40.49 5.54
195 196 4.130118 GTGATTAATCAGTGAATCGGCCT 58.870 43.478 18.47 0.00 37.51 5.19
196 197 5.070446 AGTGATTAATCAGTGAATCGGCCTA 59.930 40.000 22.28 0.00 38.93 3.93
197 198 5.934625 GTGATTAATCAGTGAATCGGCCTAT 59.065 40.000 18.47 0.00 37.51 2.57
198 199 6.428159 GTGATTAATCAGTGAATCGGCCTATT 59.572 38.462 18.47 1.35 37.51 1.73
199 200 7.602644 GTGATTAATCAGTGAATCGGCCTATTA 59.397 37.037 18.47 0.00 37.51 0.98
202 203 5.552870 ATCAGTGAATCGGCCTATTAACT 57.447 39.130 13.26 13.26 31.70 2.24
203 204 4.693283 TCAGTGAATCGGCCTATTAACTG 58.307 43.478 29.83 29.83 44.72 3.16
204 205 3.809832 CAGTGAATCGGCCTATTAACTGG 59.190 47.826 28.74 16.27 41.70 4.00
205 206 3.709653 AGTGAATCGGCCTATTAACTGGA 59.290 43.478 17.38 0.00 30.60 3.86
206 207 4.348168 AGTGAATCGGCCTATTAACTGGAT 59.652 41.667 17.38 0.00 30.60 3.41
208 209 6.042781 AGTGAATCGGCCTATTAACTGGATTA 59.957 38.462 17.38 0.00 30.60 1.75
209 210 6.708949 GTGAATCGGCCTATTAACTGGATTAA 59.291 38.462 9.79 0.00 37.18 1.40
210 211 7.390718 GTGAATCGGCCTATTAACTGGATTAAT 59.609 37.037 9.79 0.00 44.22 1.40
211 212 7.606456 TGAATCGGCCTATTAACTGGATTAATC 59.394 37.037 6.93 6.93 41.66 1.75
212 213 5.475719 TCGGCCTATTAACTGGATTAATCG 58.524 41.667 9.32 0.00 41.66 3.34
219 220 0.106149 ACTGGATTAATCGGCCGACC 59.894 55.000 33.75 26.61 0.00 4.79
220 221 0.105964 CTGGATTAATCGGCCGACCA 59.894 55.000 33.75 29.70 34.57 4.02
221 222 0.762418 TGGATTAATCGGCCGACCAT 59.238 50.000 33.75 22.24 34.57 3.55
223 224 2.369203 TGGATTAATCGGCCGACCATTA 59.631 45.455 33.75 22.44 34.57 1.90
224 225 3.181453 TGGATTAATCGGCCGACCATTAA 60.181 43.478 33.75 29.05 35.39 1.40
225 226 4.007659 GGATTAATCGGCCGACCATTAAT 58.992 43.478 31.04 31.04 39.59 1.40
226 227 4.094442 GGATTAATCGGCCGACCATTAATC 59.906 45.833 36.92 36.92 44.09 1.75
227 228 1.508632 AATCGGCCGACCATTAATCG 58.491 50.000 33.75 0.00 39.33 3.34
240 241 8.174484 CGACCATTAATCGGTAGATTCAATAG 57.826 38.462 8.88 0.00 45.21 1.73
241 242 7.275779 CGACCATTAATCGGTAGATTCAATAGG 59.724 40.741 8.88 0.00 45.21 2.57
242 243 8.202461 ACCATTAATCGGTAGATTCAATAGGA 57.798 34.615 7.54 0.00 45.21 2.94
243 244 8.656806 ACCATTAATCGGTAGATTCAATAGGAA 58.343 33.333 7.54 0.00 45.21 3.36
247 248 7.440523 AATCGGTAGATTCAATAGGAATTGC 57.559 36.000 0.00 0.00 46.17 3.56
248 249 5.305585 TCGGTAGATTCAATAGGAATTGCC 58.694 41.667 0.00 0.00 46.17 4.52
249 250 5.063204 CGGTAGATTCAATAGGAATTGCCA 58.937 41.667 0.00 0.00 46.17 4.92
250 251 5.530915 CGGTAGATTCAATAGGAATTGCCAA 59.469 40.000 0.00 0.00 46.17 4.52
251 252 6.513393 CGGTAGATTCAATAGGAATTGCCAAC 60.513 42.308 0.00 0.00 46.17 3.77
252 253 6.321181 GGTAGATTCAATAGGAATTGCCAACA 59.679 38.462 0.00 0.00 46.17 3.33
254 255 9.066892 GTAGATTCAATAGGAATTGCCAACATA 57.933 33.333 0.00 0.00 46.17 2.29
255 256 8.716674 AGATTCAATAGGAATTGCCAACATAT 57.283 30.769 0.00 0.00 46.17 1.78
256 257 9.151177 AGATTCAATAGGAATTGCCAACATATT 57.849 29.630 0.00 0.00 46.17 1.28
257 258 9.768662 GATTCAATAGGAATTGCCAACATATTT 57.231 29.630 0.00 0.00 46.17 1.40
258 259 9.768662 ATTCAATAGGAATTGCCAACATATTTC 57.231 29.630 0.00 0.00 43.76 2.17
259 260 8.537728 TCAATAGGAATTGCCAACATATTTCT 57.462 30.769 0.00 0.00 41.96 2.52
260 261 9.639563 TCAATAGGAATTGCCAACATATTTCTA 57.360 29.630 0.00 0.00 41.96 2.10
261 262 9.903682 CAATAGGAATTGCCAACATATTTCTAG 57.096 33.333 0.00 0.00 40.02 2.43
262 263 9.646522 AATAGGAATTGCCAACATATTTCTAGT 57.353 29.630 0.00 0.00 40.02 2.57
263 264 7.961326 AGGAATTGCCAACATATTTCTAGTT 57.039 32.000 0.00 0.00 40.02 2.24
265 266 8.815912 AGGAATTGCCAACATATTTCTAGTTTT 58.184 29.630 0.00 0.00 40.02 2.43
266 267 9.435688 GGAATTGCCAACATATTTCTAGTTTTT 57.564 29.630 0.00 0.00 36.34 1.94
293 294 5.928976 TGTGTTATGCCATACTCTAATGCT 58.071 37.500 0.00 0.00 0.00 3.79
294 295 6.356556 TGTGTTATGCCATACTCTAATGCTT 58.643 36.000 0.00 0.00 0.00 3.91
296 297 7.012327 TGTGTTATGCCATACTCTAATGCTTTC 59.988 37.037 0.00 0.00 0.00 2.62
300 301 4.133078 GCCATACTCTAATGCTTTCAGCT 58.867 43.478 0.00 0.00 42.97 4.24
302 303 5.936956 GCCATACTCTAATGCTTTCAGCTAT 59.063 40.000 0.00 0.00 42.97 2.97
303 304 6.128336 GCCATACTCTAATGCTTTCAGCTATG 60.128 42.308 0.00 0.00 42.97 2.23
304 305 6.933521 CCATACTCTAATGCTTTCAGCTATGT 59.066 38.462 0.00 0.00 42.97 2.29
305 306 8.090831 CCATACTCTAATGCTTTCAGCTATGTA 58.909 37.037 0.00 0.00 42.97 2.29
306 307 9.481340 CATACTCTAATGCTTTCAGCTATGTAA 57.519 33.333 0.00 0.00 42.97 2.41
312 313 9.884465 CTAATGCTTTCAGCTATGTAATAAACC 57.116 33.333 0.00 0.00 42.97 3.27
313 314 7.880160 ATGCTTTCAGCTATGTAATAAACCA 57.120 32.000 0.00 0.00 42.97 3.67
314 315 7.695480 TGCTTTCAGCTATGTAATAAACCAA 57.305 32.000 0.00 0.00 42.97 3.67
316 317 8.580720 TGCTTTCAGCTATGTAATAAACCAAAA 58.419 29.630 0.00 0.00 42.97 2.44
334 335 5.331902 CCAAAATATGCTACTGTTTGGTCG 58.668 41.667 5.50 0.00 42.07 4.79
335 336 5.123186 CCAAAATATGCTACTGTTTGGTCGA 59.877 40.000 5.50 0.00 42.07 4.20
337 338 2.094762 ATGCTACTGTTTGGTCGACC 57.905 50.000 28.17 28.17 0.00 4.79
339 340 0.672711 GCTACTGTTTGGTCGACCCC 60.673 60.000 31.19 18.94 34.29 4.95
340 341 0.974383 CTACTGTTTGGTCGACCCCT 59.026 55.000 31.19 9.68 34.29 4.79
341 342 2.173519 CTACTGTTTGGTCGACCCCTA 58.826 52.381 31.19 14.21 34.29 3.53
342 343 0.974383 ACTGTTTGGTCGACCCCTAG 59.026 55.000 31.19 23.51 34.29 3.02
343 344 0.391263 CTGTTTGGTCGACCCCTAGC 60.391 60.000 31.19 18.07 34.29 3.42
344 345 0.834687 TGTTTGGTCGACCCCTAGCT 60.835 55.000 31.19 0.00 34.29 3.32
345 346 1.188863 GTTTGGTCGACCCCTAGCTA 58.811 55.000 31.19 8.39 34.29 3.32
347 348 2.169978 GTTTGGTCGACCCCTAGCTATT 59.830 50.000 31.19 0.00 34.29 1.73
348 349 1.410004 TGGTCGACCCCTAGCTATTG 58.590 55.000 31.19 0.00 34.29 1.90
349 350 1.342674 TGGTCGACCCCTAGCTATTGT 60.343 52.381 31.19 0.00 34.29 2.71
350 351 1.068741 GGTCGACCCCTAGCTATTGTG 59.931 57.143 24.75 0.00 0.00 3.33
351 352 1.068741 GTCGACCCCTAGCTATTGTGG 59.931 57.143 3.51 0.00 0.00 4.17
353 354 1.341531 CGACCCCTAGCTATTGTGGAG 59.658 57.143 0.00 0.00 0.00 3.86
354 355 1.070914 GACCCCTAGCTATTGTGGAGC 59.929 57.143 0.00 0.00 40.42 4.70
355 356 0.034059 CCCCTAGCTATTGTGGAGCG 59.966 60.000 0.00 0.00 44.98 5.03
357 358 1.000283 CCCTAGCTATTGTGGAGCGAG 60.000 57.143 0.00 0.00 44.98 5.03
358 359 1.957177 CCTAGCTATTGTGGAGCGAGA 59.043 52.381 6.36 0.00 43.14 4.04
359 360 2.030363 CCTAGCTATTGTGGAGCGAGAG 60.030 54.545 6.36 0.00 43.14 3.20
360 361 0.749649 AGCTATTGTGGAGCGAGAGG 59.250 55.000 0.00 0.00 44.98 3.69
361 362 0.249657 GCTATTGTGGAGCGAGAGGG 60.250 60.000 0.00 0.00 0.00 4.30
363 364 1.048724 TATTGTGGAGCGAGAGGGGG 61.049 60.000 0.00 0.00 0.00 5.40
365 366 2.444895 GTGGAGCGAGAGGGGGAT 60.445 66.667 0.00 0.00 0.00 3.85
366 367 2.444706 TGGAGCGAGAGGGGGATG 60.445 66.667 0.00 0.00 0.00 3.51
367 368 3.237741 GGAGCGAGAGGGGGATGG 61.238 72.222 0.00 0.00 0.00 3.51
368 369 3.237741 GAGCGAGAGGGGGATGGG 61.238 72.222 0.00 0.00 0.00 4.00
369 370 3.758133 GAGCGAGAGGGGGATGGGA 62.758 68.421 0.00 0.00 0.00 4.37
370 371 3.237741 GCGAGAGGGGGATGGGAG 61.238 72.222 0.00 0.00 0.00 4.30
371 372 2.525381 CGAGAGGGGGATGGGAGG 60.525 72.222 0.00 0.00 0.00 4.30
372 373 2.122189 GAGAGGGGGATGGGAGGG 60.122 72.222 0.00 0.00 0.00 4.30
373 374 2.628465 AGAGGGGGATGGGAGGGA 60.628 66.667 0.00 0.00 0.00 4.20
374 375 2.035610 AGAGGGGGATGGGAGGGAT 61.036 63.158 0.00 0.00 0.00 3.85
376 377 1.387926 AGGGGGATGGGAGGGATTG 60.388 63.158 0.00 0.00 0.00 2.67
377 378 2.523016 GGGGATGGGAGGGATTGC 59.477 66.667 0.00 0.00 0.00 3.56
379 380 1.152368 GGGATGGGAGGGATTGCAG 59.848 63.158 0.00 0.00 0.00 4.41
380 381 1.152368 GGATGGGAGGGATTGCAGG 59.848 63.158 0.00 0.00 0.00 4.85
381 382 1.152368 GATGGGAGGGATTGCAGGG 59.848 63.158 0.00 0.00 0.00 4.45
382 383 1.309013 ATGGGAGGGATTGCAGGGA 60.309 57.895 0.00 0.00 0.00 4.20
384 385 1.145900 TGGGAGGGATTGCAGGGAAA 61.146 55.000 0.00 0.00 0.00 3.13
385 386 0.041090 GGGAGGGATTGCAGGGAAAA 59.959 55.000 0.00 0.00 0.00 2.29
386 387 1.343377 GGGAGGGATTGCAGGGAAAAT 60.343 52.381 0.00 0.00 0.00 1.82
390 391 3.708121 GAGGGATTGCAGGGAAAATTCAT 59.292 43.478 0.00 0.00 0.00 2.57
391 392 3.453353 AGGGATTGCAGGGAAAATTCATG 59.547 43.478 0.00 0.00 0.00 3.07
393 394 3.432608 GGATTGCAGGGAAAATTCATGGG 60.433 47.826 0.00 0.00 0.00 4.00
394 395 0.903942 TGCAGGGAAAATTCATGGGC 59.096 50.000 0.00 0.00 0.00 5.36
395 396 1.197812 GCAGGGAAAATTCATGGGCT 58.802 50.000 0.00 0.00 0.00 5.19
397 398 2.967887 GCAGGGAAAATTCATGGGCTAT 59.032 45.455 0.00 0.00 0.00 2.97
398 399 3.243975 GCAGGGAAAATTCATGGGCTATG 60.244 47.826 4.19 4.19 38.17 2.23
399 400 3.962718 CAGGGAAAATTCATGGGCTATGT 59.037 43.478 10.81 0.00 38.01 2.29
400 401 4.406649 CAGGGAAAATTCATGGGCTATGTT 59.593 41.667 10.81 0.00 38.01 2.71
401 402 5.032170 AGGGAAAATTCATGGGCTATGTTT 58.968 37.500 10.81 4.33 38.01 2.83
403 404 4.571984 GGAAAATTCATGGGCTATGTTTGC 59.428 41.667 10.81 6.03 38.01 3.68
412 413 3.333029 GGCTATGTTTGCCCACAAATT 57.667 42.857 0.00 0.00 46.93 1.82
413 414 4.464069 GGCTATGTTTGCCCACAAATTA 57.536 40.909 0.00 0.00 46.93 1.40
415 416 5.427378 GGCTATGTTTGCCCACAAATTAAT 58.573 37.500 0.00 0.00 46.93 1.40
416 417 5.294060 GGCTATGTTTGCCCACAAATTAATG 59.706 40.000 0.00 0.00 46.93 1.90
417 418 5.294060 GCTATGTTTGCCCACAAATTAATGG 59.706 40.000 1.57 1.57 46.93 3.16
425 426 4.114058 CCACAAATTAATGGGTCAGCAG 57.886 45.455 0.69 0.00 31.83 4.24
427 428 2.164219 ACAAATTAATGGGTCAGCAGCG 59.836 45.455 0.00 0.00 0.00 5.18
429 430 2.645838 ATTAATGGGTCAGCAGCGAT 57.354 45.000 0.00 0.00 0.00 4.58
431 432 3.552132 TTAATGGGTCAGCAGCGATTA 57.448 42.857 0.00 0.00 31.64 1.75
432 433 2.418368 AATGGGTCAGCAGCGATTAA 57.582 45.000 0.00 0.00 27.72 1.40
433 434 2.645838 ATGGGTCAGCAGCGATTAAT 57.354 45.000 0.00 0.00 0.00 1.40
436 437 2.288666 GGGTCAGCAGCGATTAATTGA 58.711 47.619 6.89 0.00 0.00 2.57
437 438 2.032178 GGGTCAGCAGCGATTAATTGAC 59.968 50.000 6.89 6.97 35.42 3.18
439 440 2.939103 GTCAGCAGCGATTAATTGACCT 59.061 45.455 6.89 0.00 31.23 3.85
440 441 4.119862 GTCAGCAGCGATTAATTGACCTA 58.880 43.478 6.89 0.00 31.23 3.08
441 442 4.570772 GTCAGCAGCGATTAATTGACCTAA 59.429 41.667 6.89 0.00 31.23 2.69
442 443 4.570772 TCAGCAGCGATTAATTGACCTAAC 59.429 41.667 6.89 0.00 0.00 2.34
443 444 4.332543 CAGCAGCGATTAATTGACCTAACA 59.667 41.667 6.89 0.00 0.00 2.41
444 445 4.941263 AGCAGCGATTAATTGACCTAACAA 59.059 37.500 6.89 0.00 0.00 2.83
445 446 5.028375 GCAGCGATTAATTGACCTAACAAC 58.972 41.667 6.89 0.00 32.50 3.32
446 447 5.569413 CAGCGATTAATTGACCTAACAACC 58.431 41.667 6.89 0.00 32.50 3.77
447 448 5.123186 CAGCGATTAATTGACCTAACAACCA 59.877 40.000 6.89 0.00 32.50 3.67
448 449 5.708230 AGCGATTAATTGACCTAACAACCAA 59.292 36.000 6.89 0.00 32.50 3.67
450 451 7.033185 GCGATTAATTGACCTAACAACCAATT 58.967 34.615 6.89 0.00 40.81 2.32
451 452 8.185505 GCGATTAATTGACCTAACAACCAATTA 58.814 33.333 6.89 0.00 39.23 1.40
468 469 5.303747 CAATTAATTGGTCTAACGTGCCA 57.696 39.130 18.72 0.00 34.22 4.92
469 470 5.704888 CAATTAATTGGTCTAACGTGCCAA 58.295 37.500 18.72 13.81 45.02 4.52
475 476 5.554822 TTGGTCTAACGTGCCAATTAATC 57.445 39.130 9.21 0.00 37.36 1.75
476 477 4.580868 TGGTCTAACGTGCCAATTAATCA 58.419 39.130 0.00 0.00 0.00 2.57
477 478 4.634004 TGGTCTAACGTGCCAATTAATCAG 59.366 41.667 0.00 0.00 0.00 2.90
478 479 4.495844 GGTCTAACGTGCCAATTAATCAGC 60.496 45.833 0.00 3.32 0.00 4.26
479 480 2.939460 AACGTGCCAATTAATCAGCC 57.061 45.000 7.08 0.00 0.00 4.85
480 481 2.128771 ACGTGCCAATTAATCAGCCT 57.871 45.000 7.08 0.00 0.00 4.58
481 482 1.745087 ACGTGCCAATTAATCAGCCTG 59.255 47.619 7.08 0.00 0.00 4.85
482 483 2.016318 CGTGCCAATTAATCAGCCTGA 58.984 47.619 0.00 0.00 0.00 3.86
483 484 2.223340 CGTGCCAATTAATCAGCCTGAC 60.223 50.000 0.00 0.01 0.00 3.51
484 485 2.754552 GTGCCAATTAATCAGCCTGACA 59.245 45.455 0.00 0.00 0.00 3.58
485 486 3.018856 TGCCAATTAATCAGCCTGACAG 58.981 45.455 0.00 0.00 0.00 3.51
486 487 2.360165 GCCAATTAATCAGCCTGACAGG 59.640 50.000 17.83 17.83 38.80 4.00
487 488 3.624777 CCAATTAATCAGCCTGACAGGT 58.375 45.455 22.58 7.04 37.80 4.00
488 489 4.019174 CCAATTAATCAGCCTGACAGGTT 58.981 43.478 22.58 14.54 37.80 3.50
489 490 5.192927 CCAATTAATCAGCCTGACAGGTTA 58.807 41.667 22.58 10.36 37.80 2.85
490 491 5.652014 CCAATTAATCAGCCTGACAGGTTAA 59.348 40.000 22.58 17.74 37.80 2.01
491 492 6.404734 CCAATTAATCAGCCTGACAGGTTAAC 60.405 42.308 22.58 6.06 37.80 2.01
492 493 3.788227 AATCAGCCTGACAGGTTAACA 57.212 42.857 22.58 4.95 37.80 2.41
493 494 2.543777 TCAGCCTGACAGGTTAACAC 57.456 50.000 22.58 4.94 37.80 3.32
494 495 1.765904 TCAGCCTGACAGGTTAACACA 59.234 47.619 22.58 1.44 37.80 3.72
495 496 2.171659 TCAGCCTGACAGGTTAACACAA 59.828 45.455 22.58 0.00 37.80 3.33
496 497 2.290641 CAGCCTGACAGGTTAACACAAC 59.709 50.000 22.58 2.74 37.80 3.32
497 498 1.263217 GCCTGACAGGTTAACACAACG 59.737 52.381 22.58 0.00 37.80 4.10
498 499 2.828877 CCTGACAGGTTAACACAACGA 58.171 47.619 13.84 0.00 0.00 3.85
499 500 3.199677 CCTGACAGGTTAACACAACGAA 58.800 45.455 13.84 0.00 0.00 3.85
500 501 3.813166 CCTGACAGGTTAACACAACGAAT 59.187 43.478 13.84 0.00 0.00 3.34
501 502 4.992319 CCTGACAGGTTAACACAACGAATA 59.008 41.667 13.84 0.00 0.00 1.75
502 503 5.120208 CCTGACAGGTTAACACAACGAATAG 59.880 44.000 13.84 0.00 0.00 1.73
503 504 4.992319 TGACAGGTTAACACAACGAATAGG 59.008 41.667 8.10 0.00 0.00 2.57
504 505 4.964593 ACAGGTTAACACAACGAATAGGT 58.035 39.130 8.10 0.00 0.00 3.08
505 506 4.753107 ACAGGTTAACACAACGAATAGGTG 59.247 41.667 8.10 0.00 44.94 4.00
506 507 3.749609 AGGTTAACACAACGAATAGGTGC 59.250 43.478 8.10 0.00 42.61 5.01
507 508 3.749609 GGTTAACACAACGAATAGGTGCT 59.250 43.478 8.10 0.00 42.61 4.40
508 509 4.931002 GGTTAACACAACGAATAGGTGCTA 59.069 41.667 8.10 0.00 42.61 3.49
509 510 5.583457 GGTTAACACAACGAATAGGTGCTAT 59.417 40.000 8.10 0.00 42.61 2.97
510 511 6.093082 GGTTAACACAACGAATAGGTGCTATT 59.907 38.462 8.10 0.00 42.61 1.73
511 512 5.796350 AACACAACGAATAGGTGCTATTC 57.204 39.130 0.00 0.00 45.03 1.75
519 520 4.557205 GAATAGGTGCTATTCGATTCGGT 58.443 43.478 6.18 0.00 41.54 4.69
520 521 2.510768 AGGTGCTATTCGATTCGGTC 57.489 50.000 6.18 0.00 0.00 4.79
521 522 1.754803 AGGTGCTATTCGATTCGGTCA 59.245 47.619 6.18 0.00 0.00 4.02
522 523 1.859080 GGTGCTATTCGATTCGGTCAC 59.141 52.381 6.18 7.23 0.00 3.67
523 524 1.859080 GTGCTATTCGATTCGGTCACC 59.141 52.381 6.18 0.00 0.00 4.02
524 525 1.202486 TGCTATTCGATTCGGTCACCC 60.202 52.381 6.18 0.00 0.00 4.61
534 535 3.194719 GGTCACCCGTCCTACGAG 58.805 66.667 0.15 0.00 46.05 4.18
535 536 1.676967 GGTCACCCGTCCTACGAGT 60.677 63.158 0.15 0.00 46.05 4.18
536 537 0.392998 GGTCACCCGTCCTACGAGTA 60.393 60.000 0.15 0.00 46.05 2.59
537 538 1.012841 GTCACCCGTCCTACGAGTAG 58.987 60.000 0.15 3.39 46.05 2.57
548 549 4.850347 CCTACGAGTAGGGATTAACTGG 57.150 50.000 18.99 0.00 46.96 4.00
549 550 3.005578 CCTACGAGTAGGGATTAACTGGC 59.994 52.174 18.99 0.00 46.96 4.85
550 551 1.761198 ACGAGTAGGGATTAACTGGCC 59.239 52.381 0.00 0.00 0.00 5.36
551 552 1.070289 CGAGTAGGGATTAACTGGCCC 59.930 57.143 0.00 0.00 42.37 5.80
552 553 1.070289 GAGTAGGGATTAACTGGCCCG 59.930 57.143 0.00 0.00 46.68 6.13
553 554 0.835276 GTAGGGATTAACTGGCCCGT 59.165 55.000 0.00 0.00 46.68 5.28
554 555 1.211212 GTAGGGATTAACTGGCCCGTT 59.789 52.381 17.21 17.21 46.68 4.44
555 556 1.587066 AGGGATTAACTGGCCCGTTA 58.413 50.000 15.07 15.07 46.68 3.18
556 557 1.917568 AGGGATTAACTGGCCCGTTAA 59.082 47.619 27.95 27.95 46.68 2.01
557 558 2.019249 GGGATTAACTGGCCCGTTAAC 58.981 52.381 28.24 21.62 40.83 2.01
558 559 2.356432 GGGATTAACTGGCCCGTTAACT 60.356 50.000 28.24 19.15 40.83 2.24
559 560 2.681344 GGATTAACTGGCCCGTTAACTG 59.319 50.000 28.24 0.00 40.83 3.16
560 561 3.602483 GATTAACTGGCCCGTTAACTGA 58.398 45.455 28.24 12.04 40.83 3.41
561 562 3.706600 TTAACTGGCCCGTTAACTGAT 57.293 42.857 23.85 0.00 35.18 2.90
562 563 2.579410 AACTGGCCCGTTAACTGATT 57.421 45.000 11.27 0.00 0.00 2.57
563 564 3.706600 AACTGGCCCGTTAACTGATTA 57.293 42.857 11.27 0.00 0.00 1.75
564 565 3.706600 ACTGGCCCGTTAACTGATTAA 57.293 42.857 0.00 0.00 0.00 1.40
565 566 4.230745 ACTGGCCCGTTAACTGATTAAT 57.769 40.909 0.00 0.00 32.91 1.40
566 567 4.196971 ACTGGCCCGTTAACTGATTAATC 58.803 43.478 8.60 8.60 32.91 1.75
567 568 3.199677 TGGCCCGTTAACTGATTAATCG 58.800 45.455 10.80 8.09 32.91 3.34
568 569 2.546789 GGCCCGTTAACTGATTAATCGG 59.453 50.000 20.59 20.59 40.64 4.18
569 570 3.460103 GCCCGTTAACTGATTAATCGGA 58.540 45.455 27.40 6.45 41.94 4.55
570 571 3.246936 GCCCGTTAACTGATTAATCGGAC 59.753 47.826 27.40 15.56 41.94 4.79
571 572 3.488310 CCCGTTAACTGATTAATCGGACG 59.512 47.826 27.40 23.99 41.94 4.79
572 573 4.353737 CCGTTAACTGATTAATCGGACGA 58.646 43.478 27.40 11.23 41.94 4.20
573 574 4.799949 CCGTTAACTGATTAATCGGACGAA 59.200 41.667 27.40 15.64 41.94 3.85
574 575 5.461078 CCGTTAACTGATTAATCGGACGAAT 59.539 40.000 27.40 11.97 41.94 3.34
575 576 6.019318 CCGTTAACTGATTAATCGGACGAATT 60.019 38.462 27.40 14.64 41.94 2.17
576 577 7.055598 CGTTAACTGATTAATCGGACGAATTC 58.944 38.462 27.40 11.39 36.97 2.17
577 578 7.043590 CGTTAACTGATTAATCGGACGAATTCT 60.044 37.037 27.40 2.96 36.97 2.40
578 579 8.601476 GTTAACTGATTAATCGGACGAATTCTT 58.399 33.333 27.40 12.80 36.97 2.52
579 580 6.589830 ACTGATTAATCGGACGAATTCTTG 57.410 37.500 27.40 0.00 36.97 3.02
580 581 6.338146 ACTGATTAATCGGACGAATTCTTGA 58.662 36.000 27.40 0.00 36.97 3.02
581 582 6.816640 ACTGATTAATCGGACGAATTCTTGAA 59.183 34.615 27.40 0.00 36.97 2.69
582 583 7.000575 TGATTAATCGGACGAATTCTTGAAC 57.999 36.000 10.80 0.00 0.00 3.18
583 584 6.592220 TGATTAATCGGACGAATTCTTGAACA 59.408 34.615 10.80 0.00 0.00 3.18
584 585 4.928661 AATCGGACGAATTCTTGAACAG 57.071 40.909 3.52 0.00 0.00 3.16
585 586 3.380479 TCGGACGAATTCTTGAACAGT 57.620 42.857 3.52 0.00 0.00 3.55
625 626 1.610522 ACAATGAAGACAAGTGGCTGC 59.389 47.619 0.00 0.00 30.66 5.25
642 643 2.874701 GCTGCAGTGGGATAGTTATGTG 59.125 50.000 16.64 0.00 0.00 3.21
660 661 8.143193 AGTTATGTGCAAAATTCATCAGTTCAA 58.857 29.630 0.00 0.00 0.00 2.69
661 662 8.430063 GTTATGTGCAAAATTCATCAGTTCAAG 58.570 33.333 0.00 0.00 0.00 3.02
662 663 5.904941 TGTGCAAAATTCATCAGTTCAAGT 58.095 33.333 0.00 0.00 0.00 3.16
663 664 6.339730 TGTGCAAAATTCATCAGTTCAAGTT 58.660 32.000 0.00 0.00 0.00 2.66
664 665 6.476380 TGTGCAAAATTCATCAGTTCAAGTTC 59.524 34.615 0.00 0.00 0.00 3.01
665 666 6.476380 GTGCAAAATTCATCAGTTCAAGTTCA 59.524 34.615 0.00 0.00 0.00 3.18
666 667 7.010367 GTGCAAAATTCATCAGTTCAAGTTCAA 59.990 33.333 0.00 0.00 0.00 2.69
667 668 7.010367 TGCAAAATTCATCAGTTCAAGTTCAAC 59.990 33.333 0.00 0.00 0.00 3.18
668 669 7.223387 GCAAAATTCATCAGTTCAAGTTCAACT 59.777 33.333 0.00 0.00 34.24 3.16
669 670 9.090692 CAAAATTCATCAGTTCAAGTTCAACTT 57.909 29.630 0.00 0.00 39.39 2.66
670 671 8.862550 AAATTCATCAGTTCAAGTTCAACTTC 57.137 30.769 0.00 0.00 36.03 3.01
671 672 7.572523 ATTCATCAGTTCAAGTTCAACTTCA 57.427 32.000 0.00 0.00 36.03 3.02
672 673 7.389803 TTCATCAGTTCAAGTTCAACTTCAA 57.610 32.000 0.00 0.00 36.03 2.69
673 674 7.389803 TCATCAGTTCAAGTTCAACTTCAAA 57.610 32.000 0.00 0.00 36.03 2.69
674 675 7.250569 TCATCAGTTCAAGTTCAACTTCAAAC 58.749 34.615 13.73 13.73 36.03 2.93
675 676 6.567687 TCAGTTCAAGTTCAACTTCAAACA 57.432 33.333 19.93 5.11 36.03 2.83
676 677 6.378582 TCAGTTCAAGTTCAACTTCAAACAC 58.621 36.000 19.93 6.73 36.03 3.32
677 678 6.016693 TCAGTTCAAGTTCAACTTCAAACACA 60.017 34.615 19.93 8.70 36.03 3.72
678 679 6.088085 CAGTTCAAGTTCAACTTCAAACACAC 59.912 38.462 19.93 0.00 36.03 3.82
679 680 5.697473 TCAAGTTCAACTTCAAACACACA 57.303 34.783 0.00 0.00 36.03 3.72
680 681 5.457140 TCAAGTTCAACTTCAAACACACAC 58.543 37.500 0.00 0.00 36.03 3.82
681 682 5.240623 TCAAGTTCAACTTCAAACACACACT 59.759 36.000 0.00 0.00 36.03 3.55
682 683 5.046910 AGTTCAACTTCAAACACACACTG 57.953 39.130 0.00 0.00 0.00 3.66
683 684 4.759693 AGTTCAACTTCAAACACACACTGA 59.240 37.500 0.00 0.00 0.00 3.41
684 685 4.678509 TCAACTTCAAACACACACTGAC 57.321 40.909 0.00 0.00 0.00 3.51
685 686 4.323417 TCAACTTCAAACACACACTGACT 58.677 39.130 0.00 0.00 0.00 3.41
686 687 4.154015 TCAACTTCAAACACACACTGACTG 59.846 41.667 0.00 0.00 0.00 3.51
687 688 3.009723 ACTTCAAACACACACTGACTGG 58.990 45.455 0.00 0.00 0.00 4.00
688 689 1.378531 TCAAACACACACTGACTGGC 58.621 50.000 0.00 0.00 0.00 4.85
689 690 1.065491 TCAAACACACACTGACTGGCT 60.065 47.619 0.00 0.00 0.00 4.75
690 691 1.064505 CAAACACACACTGACTGGCTG 59.935 52.381 0.00 0.00 0.00 4.85
792 1807 3.064958 TGTCGTGCTGTACTATAGTCTGC 59.935 47.826 9.12 15.49 0.00 4.26
794 1809 3.883489 TCGTGCTGTACTATAGTCTGCAT 59.117 43.478 24.85 2.99 33.10 3.96
888 1907 0.681564 TGCTGGTCGTTGGTGGTTTT 60.682 50.000 0.00 0.00 0.00 2.43
889 1908 0.030235 GCTGGTCGTTGGTGGTTTTC 59.970 55.000 0.00 0.00 0.00 2.29
890 1909 0.666374 CTGGTCGTTGGTGGTTTTCC 59.334 55.000 0.00 0.00 41.14 3.13
1179 2299 4.478195 CGCATCGTTCGGACTTCT 57.522 55.556 0.00 0.00 0.00 2.85
1180 2300 2.738147 CGCATCGTTCGGACTTCTT 58.262 52.632 0.00 0.00 0.00 2.52
1183 2303 1.059264 GCATCGTTCGGACTTCTTTCG 59.941 52.381 0.00 0.00 0.00 3.46
1184 2304 1.059264 CATCGTTCGGACTTCTTTCGC 59.941 52.381 0.00 0.00 0.00 4.70
1434 3678 1.293498 GTCTTGCTCGGAGAAGGCA 59.707 57.895 9.69 0.00 34.09 4.75
1532 3780 0.537143 ATTTCACCAGAACCGCTGCA 60.537 50.000 0.00 0.00 43.50 4.41
1835 4100 2.113433 CAGATCCAGCACTGCAGGC 61.113 63.158 19.93 18.01 35.12 4.85
1910 4175 2.125147 CGAAGAGCCGGCCATGAA 60.125 61.111 26.15 0.00 0.00 2.57
1963 4228 4.752879 GCCTTGCCGCCTACGACA 62.753 66.667 0.00 0.00 43.93 4.35
2378 4690 7.500992 TCATAATGTGGTACTCTCTCCATTTC 58.499 38.462 0.00 0.00 36.09 2.17
2395 4707 9.466497 TCTCCATTTCTTTTTAGTCTGCATATT 57.534 29.630 0.00 0.00 0.00 1.28
2604 4916 6.988622 TGTGAAGTAAAAAGAAACGGAGAA 57.011 33.333 0.00 0.00 0.00 2.87
2640 4952 0.527817 AAGTCTATGCGCACTACGGC 60.528 55.000 14.90 2.38 43.93 5.68
2719 5031 7.701539 ATTTGGTCAAAATCTATGTGCACTA 57.298 32.000 19.41 4.84 32.85 2.74
2727 5039 9.612066 TCAAAATCTATGTGCACTATATTGTGA 57.388 29.630 19.41 17.65 40.12 3.58
2737 5049 6.535150 GTGCACTATATTGTGAAAGTGAGCTA 59.465 38.462 19.58 0.00 41.47 3.32
2746 5058 5.651530 TGTGAAAGTGAGCTAGTAGCATAC 58.348 41.667 23.77 19.71 45.56 2.39
2751 5063 6.961360 AAGTGAGCTAGTAGCATACACATA 57.039 37.500 29.86 9.02 46.26 2.29
2752 5064 6.567687 AGTGAGCTAGTAGCATACACATAG 57.432 41.667 29.86 0.00 46.26 2.23
2757 5069 7.501225 TGAGCTAGTAGCATACACATAGTACAA 59.499 37.037 23.77 0.00 46.26 2.41
2766 5078 6.638063 GCATACACATAGTACAAATGCAATGG 59.362 38.462 7.65 0.00 35.85 3.16
2775 5087 0.035247 AAATGCAATGGCCCGCAAAT 60.035 45.000 14.70 5.45 42.37 2.32
2792 5104 3.364549 CAAATATTTGGGAGGACCTGCA 58.635 45.455 18.72 0.00 41.11 4.41
2797 5109 2.439156 GGGAGGACCTGCATGCAC 60.439 66.667 18.46 7.33 35.85 4.57
2817 5129 0.725784 GCATGCGTGGTTGAAAGTCG 60.726 55.000 8.27 0.00 0.00 4.18
2821 5133 0.784778 GCGTGGTTGAAAGTCGAGAG 59.215 55.000 0.00 0.00 0.00 3.20
2824 5136 3.120792 CGTGGTTGAAAGTCGAGAGAAA 58.879 45.455 0.00 0.00 45.01 2.52
2833 5145 0.456995 GTCGAGAGAAAGGCCGAGTG 60.457 60.000 0.00 0.00 45.01 3.51
2850 5162 1.089920 GTGAGGCGATCAATGTTGCT 58.910 50.000 0.00 0.00 40.43 3.91
2878 5190 1.616159 GTTGCTTGGGGCTTTAGTGA 58.384 50.000 0.00 0.00 42.39 3.41
2896 5208 1.521450 GAAGTGACCGGAGACCACGA 61.521 60.000 9.46 0.00 36.06 4.35
2951 5263 3.865745 CACTGGACTTGCTACCTATTTCG 59.134 47.826 0.00 0.00 0.00 3.46
2967 5280 7.197703 ACCTATTTCGTTTGTTTGTAAGTTGG 58.802 34.615 0.00 0.00 0.00 3.77
2970 5283 5.624344 TTCGTTTGTTTGTAAGTTGGTGA 57.376 34.783 0.00 0.00 0.00 4.02
2975 5288 7.599245 TCGTTTGTTTGTAAGTTGGTGATTTTT 59.401 29.630 0.00 0.00 0.00 1.94
2977 5290 6.654793 TGTTTGTAAGTTGGTGATTTTTGC 57.345 33.333 0.00 0.00 0.00 3.68
2984 5297 3.132111 AGTTGGTGATTTTTGCTTTCGGT 59.868 39.130 0.00 0.00 0.00 4.69
2985 5298 3.090952 TGGTGATTTTTGCTTTCGGTG 57.909 42.857 0.00 0.00 0.00 4.94
2993 5306 0.463654 TTGCTTTCGGTGAGCTGTGT 60.464 50.000 0.00 0.00 40.75 3.72
3004 5317 2.996621 GTGAGCTGTGTTGGCTACTTAG 59.003 50.000 0.00 0.36 40.40 2.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 5.291614 GTCACGGTTGTACAAAGAACACTAA 59.708 40.000 10.51 0.00 30.58 2.24
60 61 3.386486 TCATCAACTGTCACGGTTGTAC 58.614 45.455 25.60 0.00 46.97 2.90
67 68 4.442403 CCGATCTAATCATCAACTGTCACG 59.558 45.833 0.00 0.00 0.00 4.35
79 80 6.062258 AGGGAAAAACTTCCGATCTAATCA 57.938 37.500 0.00 0.00 42.02 2.57
113 114 4.827304 TCGTGAACAATGCTTTTGATCA 57.173 36.364 8.21 8.21 0.00 2.92
114 115 6.451571 CGATTTCGTGAACAATGCTTTTGATC 60.452 38.462 6.92 5.43 34.11 2.92
115 116 5.343058 CGATTTCGTGAACAATGCTTTTGAT 59.657 36.000 6.92 0.00 34.11 2.57
116 117 4.674662 CGATTTCGTGAACAATGCTTTTGA 59.325 37.500 6.92 0.00 34.11 2.69
119 120 3.004315 ACCGATTTCGTGAACAATGCTTT 59.996 39.130 0.00 0.00 37.74 3.51
120 121 2.552315 ACCGATTTCGTGAACAATGCTT 59.448 40.909 0.00 0.00 37.74 3.91
121 122 2.151202 ACCGATTTCGTGAACAATGCT 58.849 42.857 0.00 0.00 37.74 3.79
122 123 2.611974 ACCGATTTCGTGAACAATGC 57.388 45.000 0.00 0.00 37.74 3.56
123 124 5.079406 CAGTTACCGATTTCGTGAACAATG 58.921 41.667 13.36 4.29 35.68 2.82
124 125 4.153475 CCAGTTACCGATTTCGTGAACAAT 59.847 41.667 13.36 0.00 35.68 2.71
125 126 3.495377 CCAGTTACCGATTTCGTGAACAA 59.505 43.478 13.36 0.00 35.68 2.83
126 127 3.061322 CCAGTTACCGATTTCGTGAACA 58.939 45.455 13.36 0.00 35.68 3.18
127 128 3.062042 ACCAGTTACCGATTTCGTGAAC 58.938 45.455 0.00 3.23 37.74 3.18
128 129 3.389925 ACCAGTTACCGATTTCGTGAA 57.610 42.857 0.00 0.00 37.74 3.18
129 130 3.674138 GCTACCAGTTACCGATTTCGTGA 60.674 47.826 0.00 0.00 37.74 4.35
130 131 2.601763 GCTACCAGTTACCGATTTCGTG 59.398 50.000 0.00 0.00 37.74 4.35
131 132 2.494870 AGCTACCAGTTACCGATTTCGT 59.505 45.455 0.00 0.00 37.74 3.85
132 133 3.160777 AGCTACCAGTTACCGATTTCG 57.839 47.619 0.00 0.00 39.44 3.46
133 134 5.259832 AGTAGCTACCAGTTACCGATTTC 57.740 43.478 20.31 0.00 33.10 2.17
136 137 2.877168 CGAGTAGCTACCAGTTACCGAT 59.123 50.000 20.31 0.00 33.10 4.18
137 138 2.093500 TCGAGTAGCTACCAGTTACCGA 60.093 50.000 20.31 13.70 34.80 4.69
140 141 3.059051 CCGATCGAGTAGCTACCAGTTAC 60.059 52.174 20.31 7.27 32.87 2.50
141 142 3.136763 CCGATCGAGTAGCTACCAGTTA 58.863 50.000 20.31 2.58 0.00 2.24
142 143 1.948145 CCGATCGAGTAGCTACCAGTT 59.052 52.381 20.31 9.50 0.00 3.16
143 144 1.595466 CCGATCGAGTAGCTACCAGT 58.405 55.000 20.31 1.62 0.00 4.00
144 145 0.238817 GCCGATCGAGTAGCTACCAG 59.761 60.000 20.31 14.21 0.00 4.00
145 146 0.179026 AGCCGATCGAGTAGCTACCA 60.179 55.000 20.31 5.27 32.73 3.25
146 147 0.953003 AAGCCGATCGAGTAGCTACC 59.047 55.000 20.31 10.80 34.49 3.18
147 148 1.602851 TCAAGCCGATCGAGTAGCTAC 59.397 52.381 18.66 16.43 34.49 3.58
148 149 1.874231 CTCAAGCCGATCGAGTAGCTA 59.126 52.381 18.66 1.64 34.49 3.32
150 151 0.663688 TCTCAAGCCGATCGAGTAGC 59.336 55.000 18.66 11.52 0.00 3.58
152 153 2.039818 ACTCTCAAGCCGATCGAGTA 57.960 50.000 18.66 0.00 33.53 2.59
155 156 1.671328 CACTACTCTCAAGCCGATCGA 59.329 52.381 18.66 0.00 0.00 3.59
156 157 1.671328 TCACTACTCTCAAGCCGATCG 59.329 52.381 8.51 8.51 0.00 3.69
157 158 4.314740 AATCACTACTCTCAAGCCGATC 57.685 45.455 0.00 0.00 0.00 3.69
158 159 5.854010 TTAATCACTACTCTCAAGCCGAT 57.146 39.130 0.00 0.00 0.00 4.18
159 160 5.359860 TGATTAATCACTACTCTCAAGCCGA 59.640 40.000 14.23 0.00 0.00 5.54
160 161 5.592054 TGATTAATCACTACTCTCAAGCCG 58.408 41.667 14.23 0.00 0.00 5.52
161 162 6.478344 CACTGATTAATCACTACTCTCAAGCC 59.522 42.308 14.23 0.00 32.50 4.35
162 163 7.261325 TCACTGATTAATCACTACTCTCAAGC 58.739 38.462 14.23 0.00 32.50 4.01
163 164 9.814899 ATTCACTGATTAATCACTACTCTCAAG 57.185 33.333 14.23 3.59 32.50 3.02
164 165 9.809096 GATTCACTGATTAATCACTACTCTCAA 57.191 33.333 14.23 0.43 33.26 3.02
165 166 8.131731 CGATTCACTGATTAATCACTACTCTCA 58.868 37.037 14.23 0.00 32.70 3.27
166 167 7.593273 CCGATTCACTGATTAATCACTACTCTC 59.407 40.741 14.23 6.58 32.70 3.20
167 168 7.429633 CCGATTCACTGATTAATCACTACTCT 58.570 38.462 14.23 0.00 32.70 3.24
168 169 6.144724 GCCGATTCACTGATTAATCACTACTC 59.855 42.308 14.23 7.03 32.70 2.59
169 170 5.986135 GCCGATTCACTGATTAATCACTACT 59.014 40.000 14.23 0.00 32.70 2.57
170 171 5.177696 GGCCGATTCACTGATTAATCACTAC 59.822 44.000 14.23 3.00 32.70 2.73
172 173 4.130118 GGCCGATTCACTGATTAATCACT 58.870 43.478 14.23 2.98 32.70 3.41
173 174 4.130118 AGGCCGATTCACTGATTAATCAC 58.870 43.478 14.23 3.01 32.70 3.06
175 176 8.443937 GTTAATAGGCCGATTCACTGATTAATC 58.556 37.037 14.98 8.60 0.00 1.75
176 177 8.157476 AGTTAATAGGCCGATTCACTGATTAAT 58.843 33.333 20.61 0.02 0.00 1.40
177 178 7.441157 CAGTTAATAGGCCGATTCACTGATTAA 59.559 37.037 32.79 12.69 40.89 1.40
178 179 6.929049 CAGTTAATAGGCCGATTCACTGATTA 59.071 38.462 32.79 7.92 40.89 1.75
179 180 5.760253 CAGTTAATAGGCCGATTCACTGATT 59.240 40.000 32.79 10.54 40.89 2.57
180 181 5.300752 CAGTTAATAGGCCGATTCACTGAT 58.699 41.667 32.79 10.83 40.89 2.90
182 183 3.809832 CCAGTTAATAGGCCGATTCACTG 59.190 47.826 30.90 30.90 39.31 3.66
183 184 3.709653 TCCAGTTAATAGGCCGATTCACT 59.290 43.478 16.95 16.95 0.00 3.41
184 185 4.067972 TCCAGTTAATAGGCCGATTCAC 57.932 45.455 14.98 14.05 0.00 3.18
185 186 4.974645 ATCCAGTTAATAGGCCGATTCA 57.025 40.909 14.98 0.79 0.00 2.57
186 187 7.201530 CGATTAATCCAGTTAATAGGCCGATTC 60.202 40.741 14.98 1.72 41.82 2.52
187 188 6.594159 CGATTAATCCAGTTAATAGGCCGATT 59.406 38.462 15.84 15.84 41.82 3.34
189 190 5.475719 CGATTAATCCAGTTAATAGGCCGA 58.524 41.667 9.87 0.00 41.82 5.54
190 191 4.630069 CCGATTAATCCAGTTAATAGGCCG 59.370 45.833 9.87 0.00 43.75 6.13
195 196 5.232463 GTCGGCCGATTAATCCAGTTAATA 58.768 41.667 33.58 0.00 41.82 0.98
196 197 4.062991 GTCGGCCGATTAATCCAGTTAAT 58.937 43.478 33.58 0.00 43.86 1.40
197 198 3.460103 GTCGGCCGATTAATCCAGTTAA 58.540 45.455 33.58 0.00 36.75 2.01
198 199 2.224113 GGTCGGCCGATTAATCCAGTTA 60.224 50.000 33.58 0.00 0.00 2.24
199 200 1.474498 GGTCGGCCGATTAATCCAGTT 60.474 52.381 33.58 0.00 0.00 3.16
202 203 0.762418 ATGGTCGGCCGATTAATCCA 59.238 50.000 33.58 31.38 37.67 3.41
203 204 1.892209 AATGGTCGGCCGATTAATCC 58.108 50.000 33.58 26.70 37.67 3.01
204 205 4.201685 CGATTAATGGTCGGCCGATTAATC 60.202 45.833 35.98 35.98 42.46 1.75
205 206 3.682858 CGATTAATGGTCGGCCGATTAAT 59.317 43.478 31.04 31.04 38.98 1.40
206 207 3.061322 CGATTAATGGTCGGCCGATTAA 58.939 45.455 33.58 29.08 37.67 1.40
208 209 1.508632 CGATTAATGGTCGGCCGATT 58.491 50.000 33.58 23.77 37.67 3.34
209 210 3.210857 CGATTAATGGTCGGCCGAT 57.789 52.632 33.58 18.35 37.67 4.18
210 211 4.742274 CGATTAATGGTCGGCCGA 57.258 55.556 27.28 27.28 37.67 5.54
215 216 7.275779 CCTATTGAATCTACCGATTAATGGTCG 59.724 40.741 11.39 7.29 39.89 4.79
221 222 8.999431 GCAATTCCTATTGAATCTACCGATTAA 58.001 33.333 2.25 0.00 42.97 1.40
223 224 6.431234 GGCAATTCCTATTGAATCTACCGATT 59.569 38.462 2.25 0.00 42.97 3.34
224 225 5.940470 GGCAATTCCTATTGAATCTACCGAT 59.060 40.000 2.25 0.00 42.97 4.18
225 226 5.163248 TGGCAATTCCTATTGAATCTACCGA 60.163 40.000 2.25 0.00 42.97 4.69
226 227 5.063204 TGGCAATTCCTATTGAATCTACCG 58.937 41.667 2.25 0.00 42.97 4.02
227 228 6.321181 TGTTGGCAATTCCTATTGAATCTACC 59.679 38.462 1.92 0.00 42.97 3.18
228 229 7.333528 TGTTGGCAATTCCTATTGAATCTAC 57.666 36.000 1.92 0.00 42.97 2.59
229 230 9.812347 ATATGTTGGCAATTCCTATTGAATCTA 57.188 29.630 1.92 0.00 42.97 1.98
230 231 8.716674 ATATGTTGGCAATTCCTATTGAATCT 57.283 30.769 1.92 0.00 42.97 2.40
231 232 9.768662 AAATATGTTGGCAATTCCTATTGAATC 57.231 29.630 1.92 0.00 42.97 2.52
232 233 9.768662 GAAATATGTTGGCAATTCCTATTGAAT 57.231 29.630 1.92 0.00 45.75 2.57
234 235 8.537728 AGAAATATGTTGGCAATTCCTATTGA 57.462 30.769 1.92 0.00 43.12 2.57
235 236 9.903682 CTAGAAATATGTTGGCAATTCCTATTG 57.096 33.333 1.92 0.00 43.28 1.90
236 237 9.646522 ACTAGAAATATGTTGGCAATTCCTATT 57.353 29.630 1.92 2.40 35.26 1.73
237 238 9.646522 AACTAGAAATATGTTGGCAATTCCTAT 57.353 29.630 1.92 0.00 35.26 2.57
238 239 9.474313 AAACTAGAAATATGTTGGCAATTCCTA 57.526 29.630 1.92 0.00 35.26 2.94
239 240 7.961326 AACTAGAAATATGTTGGCAATTCCT 57.039 32.000 1.92 0.00 35.26 3.36
240 241 9.435688 AAAAACTAGAAATATGTTGGCAATTCC 57.564 29.630 1.92 0.00 0.00 3.01
266 267 8.783093 GCATTAGAGTATGGCATAACACATAAA 58.217 33.333 9.14 0.00 31.93 1.40
269 270 6.537355 AGCATTAGAGTATGGCATAACACAT 58.463 36.000 9.14 1.00 0.00 3.21
270 271 5.928976 AGCATTAGAGTATGGCATAACACA 58.071 37.500 9.14 0.00 0.00 3.72
271 272 6.867662 AAGCATTAGAGTATGGCATAACAC 57.132 37.500 9.14 0.00 0.00 3.32
272 273 7.053498 TGAAAGCATTAGAGTATGGCATAACA 58.947 34.615 9.14 0.00 0.00 2.41
273 274 7.496529 TGAAAGCATTAGAGTATGGCATAAC 57.503 36.000 9.14 6.79 0.00 1.89
305 306 9.651913 CCAAACAGTAGCATATTTTGGTTTATT 57.348 29.630 5.12 0.00 40.83 1.40
312 313 6.021596 GTCGACCAAACAGTAGCATATTTTG 58.978 40.000 3.51 0.00 0.00 2.44
313 314 5.123344 GGTCGACCAAACAGTAGCATATTTT 59.877 40.000 29.75 0.00 35.64 1.82
314 315 4.634443 GGTCGACCAAACAGTAGCATATTT 59.366 41.667 29.75 0.00 35.64 1.40
316 317 3.431766 GGGTCGACCAAACAGTAGCATAT 60.432 47.826 34.40 0.00 39.85 1.78
318 319 1.338769 GGGTCGACCAAACAGTAGCAT 60.339 52.381 34.40 0.00 39.85 3.79
324 325 0.391263 GCTAGGGGTCGACCAAACAG 60.391 60.000 34.40 24.08 42.91 3.16
325 326 0.834687 AGCTAGGGGTCGACCAAACA 60.835 55.000 34.40 15.83 42.91 2.83
326 327 1.188863 TAGCTAGGGGTCGACCAAAC 58.811 55.000 34.40 23.23 42.91 2.93
327 328 2.169769 CAATAGCTAGGGGTCGACCAAA 59.830 50.000 34.40 18.25 42.91 3.28
328 329 1.760613 CAATAGCTAGGGGTCGACCAA 59.239 52.381 34.40 18.60 42.91 3.67
329 330 1.342674 ACAATAGCTAGGGGTCGACCA 60.343 52.381 34.40 14.79 42.91 4.02
330 331 1.068741 CACAATAGCTAGGGGTCGACC 59.931 57.143 27.04 27.04 39.11 4.79
331 332 1.068741 CCACAATAGCTAGGGGTCGAC 59.931 57.143 7.13 7.13 0.00 4.20
332 333 1.063492 TCCACAATAGCTAGGGGTCGA 60.063 52.381 0.00 0.00 0.00 4.20
333 334 1.341531 CTCCACAATAGCTAGGGGTCG 59.658 57.143 0.00 0.00 0.00 4.79
334 335 1.070914 GCTCCACAATAGCTAGGGGTC 59.929 57.143 0.00 0.00 37.01 4.46
335 336 1.132500 GCTCCACAATAGCTAGGGGT 58.868 55.000 0.00 0.00 37.01 4.95
337 338 1.000283 CTCGCTCCACAATAGCTAGGG 60.000 57.143 0.00 0.00 37.85 3.53
339 340 2.030363 CCTCTCGCTCCACAATAGCTAG 60.030 54.545 0.00 0.00 37.85 3.42
340 341 1.957177 CCTCTCGCTCCACAATAGCTA 59.043 52.381 0.00 0.00 37.85 3.32
341 342 0.749649 CCTCTCGCTCCACAATAGCT 59.250 55.000 0.00 0.00 37.85 3.32
342 343 0.249657 CCCTCTCGCTCCACAATAGC 60.250 60.000 0.00 0.00 36.60 2.97
343 344 0.390860 CCCCTCTCGCTCCACAATAG 59.609 60.000 0.00 0.00 0.00 1.73
344 345 1.048724 CCCCCTCTCGCTCCACAATA 61.049 60.000 0.00 0.00 0.00 1.90
345 346 2.370445 CCCCCTCTCGCTCCACAAT 61.370 63.158 0.00 0.00 0.00 2.71
347 348 3.317436 ATCCCCCTCTCGCTCCACA 62.317 63.158 0.00 0.00 0.00 4.17
348 349 2.444895 ATCCCCCTCTCGCTCCAC 60.445 66.667 0.00 0.00 0.00 4.02
349 350 2.444706 CATCCCCCTCTCGCTCCA 60.445 66.667 0.00 0.00 0.00 3.86
350 351 3.237741 CCATCCCCCTCTCGCTCC 61.238 72.222 0.00 0.00 0.00 4.70
351 352 3.237741 CCCATCCCCCTCTCGCTC 61.238 72.222 0.00 0.00 0.00 5.03
353 354 3.237741 CTCCCATCCCCCTCTCGC 61.238 72.222 0.00 0.00 0.00 5.03
354 355 2.525381 CCTCCCATCCCCCTCTCG 60.525 72.222 0.00 0.00 0.00 4.04
355 356 2.054834 ATCCCTCCCATCCCCCTCTC 62.055 65.000 0.00 0.00 0.00 3.20
357 358 1.072616 AATCCCTCCCATCCCCCTC 60.073 63.158 0.00 0.00 0.00 4.30
358 359 1.387926 CAATCCCTCCCATCCCCCT 60.388 63.158 0.00 0.00 0.00 4.79
359 360 3.152265 GCAATCCCTCCCATCCCCC 62.152 68.421 0.00 0.00 0.00 5.40
360 361 2.363292 CTGCAATCCCTCCCATCCCC 62.363 65.000 0.00 0.00 0.00 4.81
361 362 1.152368 CTGCAATCCCTCCCATCCC 59.848 63.158 0.00 0.00 0.00 3.85
363 364 1.152368 CCCTGCAATCCCTCCCATC 59.848 63.158 0.00 0.00 0.00 3.51
365 366 1.145900 TTTCCCTGCAATCCCTCCCA 61.146 55.000 0.00 0.00 0.00 4.37
366 367 0.041090 TTTTCCCTGCAATCCCTCCC 59.959 55.000 0.00 0.00 0.00 4.30
367 368 2.165357 ATTTTCCCTGCAATCCCTCC 57.835 50.000 0.00 0.00 0.00 4.30
368 369 3.099141 TGAATTTTCCCTGCAATCCCTC 58.901 45.455 0.00 0.00 0.00 4.30
369 370 3.188880 TGAATTTTCCCTGCAATCCCT 57.811 42.857 0.00 0.00 0.00 4.20
370 371 3.432608 CCATGAATTTTCCCTGCAATCCC 60.433 47.826 0.00 0.00 0.00 3.85
371 372 3.432608 CCCATGAATTTTCCCTGCAATCC 60.433 47.826 0.00 0.00 0.00 3.01
372 373 3.800531 CCCATGAATTTTCCCTGCAATC 58.199 45.455 0.00 0.00 0.00 2.67
373 374 2.092807 GCCCATGAATTTTCCCTGCAAT 60.093 45.455 0.00 0.00 0.00 3.56
374 375 1.278699 GCCCATGAATTTTCCCTGCAA 59.721 47.619 0.00 0.00 0.00 4.08
376 377 1.197812 AGCCCATGAATTTTCCCTGC 58.802 50.000 0.00 0.00 0.00 4.85
377 378 3.962718 ACATAGCCCATGAATTTTCCCTG 59.037 43.478 0.00 0.00 38.10 4.45
379 380 5.118286 CAAACATAGCCCATGAATTTTCCC 58.882 41.667 0.00 0.00 38.10 3.97
380 381 4.571984 GCAAACATAGCCCATGAATTTTCC 59.428 41.667 0.00 0.00 38.10 3.13
381 382 4.571984 GGCAAACATAGCCCATGAATTTTC 59.428 41.667 0.00 0.00 46.50 2.29
382 383 4.516323 GGCAAACATAGCCCATGAATTTT 58.484 39.130 0.00 0.00 46.50 1.82
384 385 3.825143 GGCAAACATAGCCCATGAATT 57.175 42.857 0.00 0.00 46.50 2.17
393 394 5.294060 CCATTAATTTGTGGGCAAACATAGC 59.706 40.000 1.80 0.00 45.99 2.97
394 395 6.907206 CCATTAATTTGTGGGCAAACATAG 57.093 37.500 1.80 0.00 45.99 2.23
404 405 3.676873 GCTGCTGACCCATTAATTTGTGG 60.677 47.826 0.00 2.61 35.22 4.17
407 408 2.423185 TCGCTGCTGACCCATTAATTTG 59.577 45.455 0.00 0.00 0.00 2.32
409 410 2.418368 TCGCTGCTGACCCATTAATT 57.582 45.000 0.00 0.00 0.00 1.40
411 412 2.418368 AATCGCTGCTGACCCATTAA 57.582 45.000 0.00 0.00 0.00 1.40
412 413 3.552132 TTAATCGCTGCTGACCCATTA 57.448 42.857 0.00 0.00 0.00 1.90
413 414 2.418368 TTAATCGCTGCTGACCCATT 57.582 45.000 0.00 0.00 0.00 3.16
415 416 2.016318 CAATTAATCGCTGCTGACCCA 58.984 47.619 0.00 0.00 0.00 4.51
416 417 2.032178 GTCAATTAATCGCTGCTGACCC 59.968 50.000 0.00 0.00 0.00 4.46
417 418 2.032178 GGTCAATTAATCGCTGCTGACC 59.968 50.000 16.05 16.05 44.28 4.02
418 419 2.939103 AGGTCAATTAATCGCTGCTGAC 59.061 45.455 7.23 7.23 33.92 3.51
420 421 4.332543 TGTTAGGTCAATTAATCGCTGCTG 59.667 41.667 0.00 0.00 0.00 4.41
421 422 4.513442 TGTTAGGTCAATTAATCGCTGCT 58.487 39.130 0.00 0.00 0.00 4.24
422 423 4.875544 TGTTAGGTCAATTAATCGCTGC 57.124 40.909 0.00 0.00 0.00 5.25
423 424 5.123186 TGGTTGTTAGGTCAATTAATCGCTG 59.877 40.000 0.00 0.00 0.00 5.18
424 425 5.250200 TGGTTGTTAGGTCAATTAATCGCT 58.750 37.500 0.00 0.00 0.00 4.93
425 426 5.554822 TGGTTGTTAGGTCAATTAATCGC 57.445 39.130 0.00 0.00 0.00 4.58
446 447 5.303747 TGGCACGTTAGACCAATTAATTG 57.696 39.130 19.40 19.40 37.52 2.32
447 448 5.968528 TTGGCACGTTAGACCAATTAATT 57.031 34.783 5.28 0.00 38.52 1.40
453 454 5.004448 TGATTAATTGGCACGTTAGACCAA 58.996 37.500 10.50 10.50 46.87 3.67
454 455 4.580868 TGATTAATTGGCACGTTAGACCA 58.419 39.130 0.00 0.00 0.00 4.02
455 456 4.495844 GCTGATTAATTGGCACGTTAGACC 60.496 45.833 8.18 0.00 0.00 3.85
456 457 4.495844 GGCTGATTAATTGGCACGTTAGAC 60.496 45.833 13.11 0.00 0.00 2.59
457 458 3.625764 GGCTGATTAATTGGCACGTTAGA 59.374 43.478 13.11 0.00 0.00 2.10
458 459 3.627577 AGGCTGATTAATTGGCACGTTAG 59.372 43.478 14.87 0.00 0.00 2.34
459 460 3.376859 CAGGCTGATTAATTGGCACGTTA 59.623 43.478 9.42 0.00 0.00 3.18
460 461 2.164219 CAGGCTGATTAATTGGCACGTT 59.836 45.455 9.42 0.00 0.00 3.99
461 462 1.745087 CAGGCTGATTAATTGGCACGT 59.255 47.619 9.42 0.00 0.00 4.49
462 463 2.016318 TCAGGCTGATTAATTGGCACG 58.984 47.619 14.43 8.11 0.00 5.34
463 464 2.754552 TGTCAGGCTGATTAATTGGCAC 59.245 45.455 21.84 4.57 0.00 5.01
464 465 3.018856 CTGTCAGGCTGATTAATTGGCA 58.981 45.455 21.84 10.06 0.00 4.92
465 466 2.360165 CCTGTCAGGCTGATTAATTGGC 59.640 50.000 21.84 5.49 0.00 4.52
466 467 3.624777 ACCTGTCAGGCTGATTAATTGG 58.375 45.455 21.84 17.01 39.63 3.16
467 468 6.150976 TGTTAACCTGTCAGGCTGATTAATTG 59.849 38.462 21.84 8.88 39.63 2.32
468 469 6.151144 GTGTTAACCTGTCAGGCTGATTAATT 59.849 38.462 21.84 14.91 39.63 1.40
469 470 5.648092 GTGTTAACCTGTCAGGCTGATTAAT 59.352 40.000 21.84 9.00 39.63 1.40
470 471 5.001232 GTGTTAACCTGTCAGGCTGATTAA 58.999 41.667 21.84 17.17 39.63 1.40
471 472 4.041075 TGTGTTAACCTGTCAGGCTGATTA 59.959 41.667 21.84 12.07 39.63 1.75
472 473 3.181445 TGTGTTAACCTGTCAGGCTGATT 60.181 43.478 21.84 13.13 39.63 2.57
473 474 2.371841 TGTGTTAACCTGTCAGGCTGAT 59.628 45.455 21.84 6.64 39.63 2.90
474 475 1.765904 TGTGTTAACCTGTCAGGCTGA 59.234 47.619 19.40 14.43 39.63 4.26
475 476 2.254546 TGTGTTAACCTGTCAGGCTG 57.745 50.000 19.40 8.58 39.63 4.85
476 477 2.572290 GTTGTGTTAACCTGTCAGGCT 58.428 47.619 19.40 9.60 39.63 4.58
477 478 1.263217 CGTTGTGTTAACCTGTCAGGC 59.737 52.381 19.40 2.98 39.63 4.85
478 479 2.828877 TCGTTGTGTTAACCTGTCAGG 58.171 47.619 17.88 17.88 42.49 3.86
479 480 5.120208 CCTATTCGTTGTGTTAACCTGTCAG 59.880 44.000 2.48 0.00 0.00 3.51
480 481 4.992319 CCTATTCGTTGTGTTAACCTGTCA 59.008 41.667 2.48 0.00 0.00 3.58
481 482 4.992951 ACCTATTCGTTGTGTTAACCTGTC 59.007 41.667 2.48 0.00 0.00 3.51
482 483 4.753107 CACCTATTCGTTGTGTTAACCTGT 59.247 41.667 2.48 0.00 0.00 4.00
483 484 4.378046 GCACCTATTCGTTGTGTTAACCTG 60.378 45.833 2.48 0.00 32.62 4.00
484 485 3.749609 GCACCTATTCGTTGTGTTAACCT 59.250 43.478 2.48 0.00 32.62 3.50
485 486 3.749609 AGCACCTATTCGTTGTGTTAACC 59.250 43.478 2.48 0.00 32.62 2.85
486 487 6.657836 ATAGCACCTATTCGTTGTGTTAAC 57.342 37.500 0.00 0.00 31.10 2.01
487 488 7.298507 GAATAGCACCTATTCGTTGTGTTAA 57.701 36.000 8.68 0.00 41.54 2.01
488 489 6.897259 GAATAGCACCTATTCGTTGTGTTA 57.103 37.500 8.68 0.00 41.54 2.41
489 490 5.796350 GAATAGCACCTATTCGTTGTGTT 57.204 39.130 8.68 0.00 41.54 3.32
497 498 4.557205 ACCGAATCGAATAGCACCTATTC 58.443 43.478 3.36 12.68 45.03 1.75
498 499 4.038763 TGACCGAATCGAATAGCACCTATT 59.961 41.667 3.36 0.00 39.09 1.73
499 500 3.572682 TGACCGAATCGAATAGCACCTAT 59.427 43.478 3.36 0.00 0.00 2.57
500 501 2.953648 TGACCGAATCGAATAGCACCTA 59.046 45.455 3.36 0.00 0.00 3.08
501 502 1.754803 TGACCGAATCGAATAGCACCT 59.245 47.619 3.36 0.00 0.00 4.00
502 503 1.859080 GTGACCGAATCGAATAGCACC 59.141 52.381 3.36 0.00 0.00 5.01
503 504 1.859080 GGTGACCGAATCGAATAGCAC 59.141 52.381 3.36 4.67 0.00 4.40
504 505 1.202486 GGGTGACCGAATCGAATAGCA 60.202 52.381 3.36 0.00 43.64 3.49
505 506 1.499049 GGGTGACCGAATCGAATAGC 58.501 55.000 3.36 0.00 43.64 2.97
528 529 3.005578 GGCCAGTTAATCCCTACTCGTAG 59.994 52.174 0.00 0.00 0.00 3.51
529 530 2.961062 GGCCAGTTAATCCCTACTCGTA 59.039 50.000 0.00 0.00 0.00 3.43
530 531 1.761198 GGCCAGTTAATCCCTACTCGT 59.239 52.381 0.00 0.00 0.00 4.18
531 532 1.070289 GGGCCAGTTAATCCCTACTCG 59.930 57.143 4.39 0.00 37.08 4.18
532 533 1.070289 CGGGCCAGTTAATCCCTACTC 59.930 57.143 4.39 0.00 37.89 2.59
533 534 1.129058 CGGGCCAGTTAATCCCTACT 58.871 55.000 4.39 0.00 37.89 2.57
534 535 0.835276 ACGGGCCAGTTAATCCCTAC 59.165 55.000 4.39 0.00 37.89 3.18
535 536 1.587066 AACGGGCCAGTTAATCCCTA 58.413 50.000 20.42 0.00 37.89 3.53
536 537 1.587066 TAACGGGCCAGTTAATCCCT 58.413 50.000 23.92 2.71 37.89 4.20
537 538 2.019249 GTTAACGGGCCAGTTAATCCC 58.981 52.381 33.96 22.12 44.97 3.85
538 539 2.681344 CAGTTAACGGGCCAGTTAATCC 59.319 50.000 33.96 24.90 44.97 3.01
539 540 3.602483 TCAGTTAACGGGCCAGTTAATC 58.398 45.455 33.96 27.09 44.97 1.75
540 541 3.706600 TCAGTTAACGGGCCAGTTAAT 57.293 42.857 33.96 23.03 44.97 1.40
541 542 3.706600 ATCAGTTAACGGGCCAGTTAA 57.293 42.857 29.98 29.98 42.30 2.01
542 543 3.706600 AATCAGTTAACGGGCCAGTTA 57.293 42.857 22.60 22.60 35.70 2.24
543 544 2.579410 AATCAGTTAACGGGCCAGTT 57.421 45.000 24.78 24.78 38.07 3.16
544 545 3.706600 TTAATCAGTTAACGGGCCAGT 57.293 42.857 4.39 2.79 0.00 4.00
545 546 3.247648 CGATTAATCAGTTAACGGGCCAG 59.752 47.826 15.57 1.85 32.91 4.85
546 547 3.199677 CGATTAATCAGTTAACGGGCCA 58.800 45.455 15.57 0.00 32.91 5.36
547 548 2.546789 CCGATTAATCAGTTAACGGGCC 59.453 50.000 15.57 0.00 38.87 5.80
548 549 3.246936 GTCCGATTAATCAGTTAACGGGC 59.753 47.826 15.57 7.24 40.64 6.13
549 550 3.488310 CGTCCGATTAATCAGTTAACGGG 59.512 47.826 15.57 5.94 40.64 5.28
550 551 4.353737 TCGTCCGATTAATCAGTTAACGG 58.646 43.478 15.57 9.34 41.06 4.44
551 552 5.937165 TTCGTCCGATTAATCAGTTAACG 57.063 39.130 15.57 14.67 32.91 3.18
552 553 8.128016 AGAATTCGTCCGATTAATCAGTTAAC 57.872 34.615 15.57 0.00 32.91 2.01
553 554 8.600625 CAAGAATTCGTCCGATTAATCAGTTAA 58.399 33.333 15.57 3.54 34.50 2.01
554 555 7.977293 TCAAGAATTCGTCCGATTAATCAGTTA 59.023 33.333 15.57 0.00 0.00 2.24
555 556 6.816640 TCAAGAATTCGTCCGATTAATCAGTT 59.183 34.615 15.57 0.00 0.00 3.16
556 557 6.338146 TCAAGAATTCGTCCGATTAATCAGT 58.662 36.000 15.57 0.00 0.00 3.41
557 558 6.828502 TCAAGAATTCGTCCGATTAATCAG 57.171 37.500 15.57 4.29 0.00 2.90
558 559 6.592220 TGTTCAAGAATTCGTCCGATTAATCA 59.408 34.615 15.57 0.00 0.00 2.57
559 560 7.000575 TGTTCAAGAATTCGTCCGATTAATC 57.999 36.000 5.30 5.30 0.00 1.75
560 561 6.594159 ACTGTTCAAGAATTCGTCCGATTAAT 59.406 34.615 0.00 0.00 0.00 1.40
561 562 5.929992 ACTGTTCAAGAATTCGTCCGATTAA 59.070 36.000 0.00 0.00 0.00 1.40
562 563 5.347635 CACTGTTCAAGAATTCGTCCGATTA 59.652 40.000 0.00 0.00 0.00 1.75
563 564 4.152402 CACTGTTCAAGAATTCGTCCGATT 59.848 41.667 0.00 0.00 0.00 3.34
564 565 3.679980 CACTGTTCAAGAATTCGTCCGAT 59.320 43.478 0.00 0.00 0.00 4.18
565 566 3.057019 CACTGTTCAAGAATTCGTCCGA 58.943 45.455 0.00 0.00 0.00 4.55
566 567 3.057019 TCACTGTTCAAGAATTCGTCCG 58.943 45.455 0.00 0.00 0.00 4.79
567 568 4.690748 TGATCACTGTTCAAGAATTCGTCC 59.309 41.667 0.00 0.00 0.00 4.79
568 569 5.845985 TGATCACTGTTCAAGAATTCGTC 57.154 39.130 0.00 0.00 0.00 4.20
569 570 6.618287 TTTGATCACTGTTCAAGAATTCGT 57.382 33.333 0.00 0.00 34.76 3.85
570 571 7.112565 CACTTTTGATCACTGTTCAAGAATTCG 59.887 37.037 0.00 0.00 34.76 3.34
571 572 7.917505 ACACTTTTGATCACTGTTCAAGAATTC 59.082 33.333 0.00 0.00 34.76 2.17
572 573 7.775120 ACACTTTTGATCACTGTTCAAGAATT 58.225 30.769 0.00 0.00 34.76 2.17
573 574 7.338800 ACACTTTTGATCACTGTTCAAGAAT 57.661 32.000 0.00 0.00 34.76 2.40
574 575 6.757897 ACACTTTTGATCACTGTTCAAGAA 57.242 33.333 0.00 2.09 34.76 2.52
575 576 9.725019 ATATACACTTTTGATCACTGTTCAAGA 57.275 29.630 0.00 0.00 34.76 3.02
623 624 2.238395 TGCACATAACTATCCCACTGCA 59.762 45.455 0.00 0.00 0.00 4.41
625 626 5.895636 TTTTGCACATAACTATCCCACTG 57.104 39.130 0.00 0.00 0.00 3.66
642 643 7.223387 AGTTGAACTTGAACTGATGAATTTTGC 59.777 33.333 0.00 0.00 32.30 3.68
660 661 4.759693 TCAGTGTGTGTTTGAAGTTGAACT 59.240 37.500 0.00 0.00 0.00 3.01
661 662 4.851558 GTCAGTGTGTGTTTGAAGTTGAAC 59.148 41.667 0.00 0.00 0.00 3.18
662 663 4.759693 AGTCAGTGTGTGTTTGAAGTTGAA 59.240 37.500 0.00 0.00 0.00 2.69
663 664 4.154015 CAGTCAGTGTGTGTTTGAAGTTGA 59.846 41.667 0.00 0.00 0.00 3.18
664 665 4.406069 CAGTCAGTGTGTGTTTGAAGTTG 58.594 43.478 0.00 0.00 0.00 3.16
665 666 3.440173 CCAGTCAGTGTGTGTTTGAAGTT 59.560 43.478 0.00 0.00 0.00 2.66
666 667 3.009723 CCAGTCAGTGTGTGTTTGAAGT 58.990 45.455 0.00 0.00 0.00 3.01
667 668 2.223340 GCCAGTCAGTGTGTGTTTGAAG 60.223 50.000 0.00 0.00 0.00 3.02
668 669 1.742831 GCCAGTCAGTGTGTGTTTGAA 59.257 47.619 0.00 0.00 0.00 2.69
669 670 1.065491 AGCCAGTCAGTGTGTGTTTGA 60.065 47.619 0.00 0.00 0.00 2.69
670 671 1.064505 CAGCCAGTCAGTGTGTGTTTG 59.935 52.381 0.00 0.00 0.00 2.93
671 672 1.065491 TCAGCCAGTCAGTGTGTGTTT 60.065 47.619 0.00 0.00 0.00 2.83
672 673 0.541392 TCAGCCAGTCAGTGTGTGTT 59.459 50.000 0.00 0.00 0.00 3.32
673 674 0.179073 GTCAGCCAGTCAGTGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
674 675 0.179076 TGTCAGCCAGTCAGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
675 676 0.179073 GTGTCAGCCAGTCAGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
676 677 0.179076 TGTGTCAGCCAGTCAGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
677 678 0.179073 GTGTGTCAGCCAGTCAGTGT 60.179 55.000 0.00 0.00 0.00 3.55
678 679 0.179076 TGTGTGTCAGCCAGTCAGTG 60.179 55.000 0.00 0.00 0.00 3.66
679 680 0.179073 GTGTGTGTCAGCCAGTCAGT 60.179 55.000 0.00 0.00 0.00 3.41
680 681 0.179076 TGTGTGTGTCAGCCAGTCAG 60.179 55.000 0.00 0.00 0.00 3.51
681 682 0.469494 ATGTGTGTGTCAGCCAGTCA 59.531 50.000 0.00 0.00 0.00 3.41
682 683 2.455674 TATGTGTGTGTCAGCCAGTC 57.544 50.000 0.00 0.00 0.00 3.51
683 684 4.760530 ATATATGTGTGTGTCAGCCAGT 57.239 40.909 0.00 0.00 0.00 4.00
684 685 5.463392 GTGTATATATGTGTGTGTCAGCCAG 59.537 44.000 0.00 0.00 0.00 4.85
685 686 5.356426 GTGTATATATGTGTGTGTCAGCCA 58.644 41.667 0.00 0.00 0.00 4.75
686 687 4.444388 CGTGTATATATGTGTGTGTCAGCC 59.556 45.833 0.00 0.00 0.00 4.85
687 688 4.444388 CCGTGTATATATGTGTGTGTCAGC 59.556 45.833 0.00 0.00 0.00 4.26
688 689 4.444388 GCCGTGTATATATGTGTGTGTCAG 59.556 45.833 0.00 0.00 0.00 3.51
689 690 4.098807 AGCCGTGTATATATGTGTGTGTCA 59.901 41.667 0.00 0.00 0.00 3.58
690 691 4.617959 AGCCGTGTATATATGTGTGTGTC 58.382 43.478 0.00 0.00 0.00 3.67
792 1807 6.019640 GGTTGCATTTTGACCATCGAATTATG 60.020 38.462 0.00 0.00 33.61 1.90
794 1809 5.406649 GGTTGCATTTTGACCATCGAATTA 58.593 37.500 0.00 0.00 33.61 1.40
888 1907 1.005394 GTCTCCTGCCGAAAACGGA 60.005 57.895 12.85 0.00 0.00 4.69
889 1908 2.380410 CGTCTCCTGCCGAAAACGG 61.380 63.158 4.21 4.21 0.00 4.44
890 1909 3.011760 GCGTCTCCTGCCGAAAACG 62.012 63.158 0.00 0.00 0.00 3.60
1107 2227 1.446272 CTCGTCGAAGGCCAAGGTC 60.446 63.158 5.01 0.00 0.00 3.85
1176 2296 3.625764 GGTAGCCAATACATGCGAAAGAA 59.374 43.478 0.00 0.00 35.96 2.52
1177 2297 3.202906 GGTAGCCAATACATGCGAAAGA 58.797 45.455 0.00 0.00 35.96 2.52
1179 2299 2.992593 TGGTAGCCAATACATGCGAAA 58.007 42.857 0.00 0.00 35.96 3.46
1180 2300 2.700722 TGGTAGCCAATACATGCGAA 57.299 45.000 0.00 0.00 35.96 4.70
1183 2303 2.100749 GGGTTTGGTAGCCAATACATGC 59.899 50.000 1.09 0.00 43.55 4.06
1265 3500 2.697229 TGATGAGCACAAGATCGATCCT 59.303 45.455 21.66 11.08 31.29 3.24
1434 3678 0.336737 TGGGACAACTTTGGGTGGTT 59.663 50.000 0.00 0.00 31.09 3.67
1532 3780 0.625849 ATCTTGTCTCGGGGGCAATT 59.374 50.000 0.00 0.00 0.00 2.32
1910 4175 4.189580 CGGCACCGATGGGGGATT 62.190 66.667 2.01 0.00 40.10 3.01
1963 4228 4.946157 GTGTGAAGATTCAGGTGGATGATT 59.054 41.667 0.00 0.00 37.98 2.57
2348 4660 8.988060 TGGAGAGAGTACCACATTATGATAAAA 58.012 33.333 0.00 0.00 0.00 1.52
2604 4916 7.148069 GCATAGACTTTGGCCAACTTTATACTT 60.148 37.037 20.35 0.00 0.00 2.24
2706 5018 9.049523 CACTTTCACAATATAGTGCACATAGAT 57.950 33.333 21.04 8.44 39.35 1.98
2713 5025 5.491070 AGCTCACTTTCACAATATAGTGCA 58.509 37.500 0.00 0.00 39.35 4.57
2714 5026 6.758886 ACTAGCTCACTTTCACAATATAGTGC 59.241 38.462 0.00 0.00 39.35 4.40
2719 5031 6.878317 TGCTACTAGCTCACTTTCACAATAT 58.122 36.000 9.49 0.00 42.97 1.28
2727 5039 5.661056 TGTGTATGCTACTAGCTCACTTT 57.339 39.130 20.73 3.25 42.97 2.66
2737 5049 7.272244 TGCATTTGTACTATGTGTATGCTACT 58.728 34.615 10.71 0.00 35.56 2.57
2746 5058 4.362279 GGCCATTGCATTTGTACTATGTG 58.638 43.478 0.00 0.00 40.13 3.21
2751 5063 0.817013 CGGGCCATTGCATTTGTACT 59.183 50.000 4.39 0.00 40.13 2.73
2752 5064 0.805711 GCGGGCCATTGCATTTGTAC 60.806 55.000 4.39 0.00 40.13 2.90
2757 5069 0.829333 TATTTGCGGGCCATTGCATT 59.171 45.000 16.04 10.14 41.42 3.56
2766 5078 0.389025 CCTCCCAAATATTTGCGGGC 59.611 55.000 24.03 0.00 36.86 6.13
2775 5087 1.410083 GCATGCAGGTCCTCCCAAATA 60.410 52.381 14.21 0.00 34.66 1.40
2797 5109 0.725784 GACTTTCAACCACGCATGCG 60.726 55.000 36.79 36.79 46.03 4.73
2804 5116 3.495001 CCTTTCTCTCGACTTTCAACCAC 59.505 47.826 0.00 0.00 0.00 4.16
2817 5129 0.174617 CCTCACTCGGCCTTTCTCTC 59.825 60.000 0.00 0.00 0.00 3.20
2833 5145 1.739466 TGAAGCAACATTGATCGCCTC 59.261 47.619 0.00 0.00 0.00 4.70
2878 5190 1.111116 TTCGTGGTCTCCGGTCACTT 61.111 55.000 0.00 0.00 0.00 3.16
2896 5208 0.664767 GTCACGCGTCTTCTCTGCTT 60.665 55.000 9.86 0.00 0.00 3.91
2944 5256 7.911205 TCACCAACTTACAAACAAACGAAATAG 59.089 33.333 0.00 0.00 0.00 1.73
2951 5263 7.480229 GCAAAAATCACCAACTTACAAACAAAC 59.520 33.333 0.00 0.00 0.00 2.93
2967 5280 2.726241 GCTCACCGAAAGCAAAAATCAC 59.274 45.455 0.00 0.00 39.61 3.06
2970 5283 2.362077 ACAGCTCACCGAAAGCAAAAAT 59.638 40.909 6.45 0.00 42.35 1.82
2975 5288 0.463654 AACACAGCTCACCGAAAGCA 60.464 50.000 6.45 0.00 42.35 3.91
2977 5290 0.588252 CCAACACAGCTCACCGAAAG 59.412 55.000 0.00 0.00 0.00 2.62
2984 5297 3.319137 CTAAGTAGCCAACACAGCTCA 57.681 47.619 0.00 0.00 41.83 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.