Multiple sequence alignment - TraesCS1D01G360900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G360900 chr1D 100.000 5373 0 0 1 5373 443815149 443820521 0.000000e+00 9923.0
1 TraesCS1D01G360900 chr1A 89.302 3898 214 69 1108 4903 539754407 539758203 0.000000e+00 4700.0
2 TraesCS1D01G360900 chr1A 87.097 713 50 10 1776 2458 570327944 570327244 0.000000e+00 769.0
3 TraesCS1D01G360900 chr1A 83.668 698 51 20 405 1086 539753479 539754129 2.770000e-167 599.0
4 TraesCS1D01G360900 chr1A 86.957 552 35 10 1932 2458 37814443 37813904 2.160000e-163 586.0
5 TraesCS1D01G360900 chr1A 91.873 283 18 3 5095 5373 539758488 539758769 1.810000e-104 390.0
6 TraesCS1D01G360900 chr1B 91.741 1804 99 13 3085 4887 603294272 603296026 0.000000e+00 2460.0
7 TraesCS1D01G360900 chr1B 87.615 759 66 15 1387 2128 603292368 603293115 0.000000e+00 856.0
8 TraesCS1D01G360900 chr1B 88.732 710 49 8 2127 2825 603293275 603293964 0.000000e+00 839.0
9 TraesCS1D01G360900 chr1B 97.910 335 7 0 1056 1390 603285044 603285378 1.000000e-161 580.0
10 TraesCS1D01G360900 chr1B 84.635 384 29 8 422 795 603284317 603284680 6.620000e-94 355.0
11 TraesCS1D01G360900 chr1B 88.710 124 11 2 2900 3022 603294125 603294246 1.210000e-31 148.0
12 TraesCS1D01G360900 chr1B 89.873 79 4 3 804 878 603284713 603284791 1.230000e-16 99.0
13 TraesCS1D01G360900 chr2A 87.115 714 49 13 1776 2458 572190565 572189864 0.000000e+00 769.0
14 TraesCS1D01G360900 chr2A 88.095 672 43 6 1812 2458 545286268 545286927 0.000000e+00 763.0
15 TraesCS1D01G360900 chr2A 85.854 714 58 13 1776 2458 577098274 577097573 0.000000e+00 719.0
16 TraesCS1D01G360900 chr2A 87.681 552 30 7 1932 2458 30403473 30402935 4.600000e-170 608.0
17 TraesCS1D01G360900 chr5A 86.835 714 51 13 1776 2458 103311890 103311189 0.000000e+00 758.0
18 TraesCS1D01G360900 chr5A 88.043 552 29 6 1932 2458 186818467 186817928 2.130000e-173 619.0
19 TraesCS1D01G360900 chr5A 87.862 552 30 6 1932 2458 186858442 186858981 9.890000e-172 614.0
20 TraesCS1D01G360900 chr5A 87.703 553 30 8 1932 2458 229663989 229664529 1.280000e-170 610.0
21 TraesCS1D01G360900 chr5A 87.342 553 31 6 1932 2458 563184626 563184087 9.960000e-167 597.0
22 TraesCS1D01G360900 chr4A 87.342 553 32 9 1932 2458 301109999 301110539 2.770000e-167 599.0
23 TraesCS1D01G360900 chr4A 71.461 445 102 18 3530 3960 597014970 597015403 1.590000e-15 95.3
24 TraesCS1D01G360900 chr3B 71.815 518 126 18 3530 4034 795840150 795840660 4.370000e-26 130.0
25 TraesCS1D01G360900 chr5B 70.803 685 152 37 3530 4190 606301893 606302553 4.400000e-21 113.0
26 TraesCS1D01G360900 chr3D 71.042 518 130 16 3530 4034 593236407 593236917 2.050000e-19 108.0
27 TraesCS1D01G360900 chr4B 71.332 443 104 16 3531 3960 11656957 11656525 5.730000e-15 93.5
28 TraesCS1D01G360900 chr5D 70.506 573 133 25 3636 4190 491528128 491528682 7.410000e-14 89.8
29 TraesCS1D01G360900 chr4D 71.322 401 94 15 3531 3919 6424697 6425088 3.450000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G360900 chr1D 443815149 443820521 5372 False 9923.000000 9923 100.0000 1 5373 1 chr1D.!!$F1 5372
1 TraesCS1D01G360900 chr1A 539753479 539758769 5290 False 1896.333333 4700 88.2810 405 5373 3 chr1A.!!$F1 4968
2 TraesCS1D01G360900 chr1A 570327244 570327944 700 True 769.000000 769 87.0970 1776 2458 1 chr1A.!!$R2 682
3 TraesCS1D01G360900 chr1A 37813904 37814443 539 True 586.000000 586 86.9570 1932 2458 1 chr1A.!!$R1 526
4 TraesCS1D01G360900 chr1B 603292368 603296026 3658 False 1075.750000 2460 89.1995 1387 4887 4 chr1B.!!$F2 3500
5 TraesCS1D01G360900 chr1B 603284317 603285378 1061 False 344.666667 580 90.8060 422 1390 3 chr1B.!!$F1 968
6 TraesCS1D01G360900 chr2A 572189864 572190565 701 True 769.000000 769 87.1150 1776 2458 1 chr2A.!!$R2 682
7 TraesCS1D01G360900 chr2A 545286268 545286927 659 False 763.000000 763 88.0950 1812 2458 1 chr2A.!!$F1 646
8 TraesCS1D01G360900 chr2A 577097573 577098274 701 True 719.000000 719 85.8540 1776 2458 1 chr2A.!!$R3 682
9 TraesCS1D01G360900 chr2A 30402935 30403473 538 True 608.000000 608 87.6810 1932 2458 1 chr2A.!!$R1 526
10 TraesCS1D01G360900 chr5A 103311189 103311890 701 True 758.000000 758 86.8350 1776 2458 1 chr5A.!!$R1 682
11 TraesCS1D01G360900 chr5A 186817928 186818467 539 True 619.000000 619 88.0430 1932 2458 1 chr5A.!!$R2 526
12 TraesCS1D01G360900 chr5A 186858442 186858981 539 False 614.000000 614 87.8620 1932 2458 1 chr5A.!!$F1 526
13 TraesCS1D01G360900 chr5A 229663989 229664529 540 False 610.000000 610 87.7030 1932 2458 1 chr5A.!!$F2 526
14 TraesCS1D01G360900 chr5A 563184087 563184626 539 True 597.000000 597 87.3420 1932 2458 1 chr5A.!!$R3 526
15 TraesCS1D01G360900 chr4A 301109999 301110539 540 False 599.000000 599 87.3420 1932 2458 1 chr4A.!!$F1 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.034616 GGATCTGAGAGAATGGGCGG 59.965 60.000 0.00 0.00 0.00 6.13 F
24 25 0.034616 GATCTGAGAGAATGGGCGGG 59.965 60.000 0.00 0.00 0.00 6.13 F
173 174 0.035739 GCTCGTCCCCTAAACCAACA 59.964 55.000 0.00 0.00 0.00 3.33 F
189 190 0.037590 AACATTGGTAGCGGAGGCAA 59.962 50.000 0.00 0.00 43.41 4.52 F
231 232 0.254747 TGGCGGTAAAAGGATGAGGG 59.745 55.000 0.00 0.00 0.00 4.30 F
232 233 0.255033 GGCGGTAAAAGGATGAGGGT 59.745 55.000 0.00 0.00 0.00 4.34 F
262 263 0.397816 AGAAGAGGACGGAGATGGGG 60.398 60.000 0.00 0.00 0.00 4.96 F
281 282 0.990818 GGATGGGGGAGGAAAGAGCT 60.991 60.000 0.00 0.00 0.00 4.09 F
1841 2265 1.072806 AGTTCAGACAGGCAGCATGAA 59.927 47.619 15.39 3.25 39.69 2.57 F
2416 3033 0.179100 TGAAGCAGCGTCTATCAGCC 60.179 55.000 9.88 0.00 0.00 4.85 F
2417 3034 0.179100 GAAGCAGCGTCTATCAGCCA 60.179 55.000 0.37 0.00 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1581 1972 0.391661 CTACACGCAACTCTGGCCAT 60.392 55.000 5.51 0.0 0.00 4.40 R
1585 1976 0.670546 CCCACTACACGCAACTCTGG 60.671 60.000 0.00 0.0 0.00 3.86 R
1586 1977 0.670546 CCCCACTACACGCAACTCTG 60.671 60.000 0.00 0.0 0.00 3.35 R
1587 1978 0.830444 TCCCCACTACACGCAACTCT 60.830 55.000 0.00 0.0 0.00 3.24 R
2229 2845 0.673333 TGTGGCTGAACCTACATGCG 60.673 55.000 0.00 0.0 40.22 4.73 R
2236 2853 1.556911 CAGTCCTATGTGGCTGAACCT 59.443 52.381 0.00 0.0 40.20 3.50 R
2244 2861 2.037772 GCCATCTACCAGTCCTATGTGG 59.962 54.545 0.00 0.0 39.98 4.17 R
2315 2932 1.260825 CAGCATAGAGAGCATTGCACG 59.739 52.381 11.91 0.0 37.56 5.34 R
3526 4330 0.169672 ACGGGTAGATGTTGACGACG 59.830 55.000 0.00 0.0 0.00 5.12 R
4255 5059 0.904865 ACACGCATCCTCCCTGAGAA 60.905 55.000 0.00 0.0 0.00 2.87 R
4433 5240 2.041265 AATCCGGTGCTCTCCCCT 59.959 61.111 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.034878 TGTCGGATCTGAGAGAATGGG 58.965 52.381 3.91 0.00 0.00 4.00
21 22 1.043816 TCGGATCTGAGAGAATGGGC 58.956 55.000 0.00 0.00 0.00 5.36
22 23 0.319383 CGGATCTGAGAGAATGGGCG 60.319 60.000 0.00 0.00 0.00 6.13
23 24 0.034616 GGATCTGAGAGAATGGGCGG 59.965 60.000 0.00 0.00 0.00 6.13
24 25 0.034616 GATCTGAGAGAATGGGCGGG 59.965 60.000 0.00 0.00 0.00 6.13
25 26 1.414061 ATCTGAGAGAATGGGCGGGG 61.414 60.000 0.00 0.00 0.00 5.73
26 27 2.040442 TGAGAGAATGGGCGGGGA 59.960 61.111 0.00 0.00 0.00 4.81
27 28 2.037620 CTGAGAGAATGGGCGGGGAG 62.038 65.000 0.00 0.00 0.00 4.30
28 29 2.770048 AGAGAATGGGCGGGGAGG 60.770 66.667 0.00 0.00 0.00 4.30
29 30 2.768344 GAGAATGGGCGGGGAGGA 60.768 66.667 0.00 0.00 0.00 3.71
30 31 2.286121 AGAATGGGCGGGGAGGAA 60.286 61.111 0.00 0.00 0.00 3.36
31 32 2.193248 GAATGGGCGGGGAGGAAG 59.807 66.667 0.00 0.00 0.00 3.46
32 33 3.420482 AATGGGCGGGGAGGAAGG 61.420 66.667 0.00 0.00 0.00 3.46
38 39 3.171388 CGGGGAGGAAGGGGGATG 61.171 72.222 0.00 0.00 0.00 3.51
39 40 2.376842 GGGGAGGAAGGGGGATGA 59.623 66.667 0.00 0.00 0.00 2.92
40 41 2.079288 GGGGAGGAAGGGGGATGAC 61.079 68.421 0.00 0.00 0.00 3.06
41 42 2.444256 GGGAGGAAGGGGGATGACG 61.444 68.421 0.00 0.00 0.00 4.35
42 43 1.382695 GGAGGAAGGGGGATGACGA 60.383 63.158 0.00 0.00 0.00 4.20
43 44 1.403687 GGAGGAAGGGGGATGACGAG 61.404 65.000 0.00 0.00 0.00 4.18
44 45 1.383248 AGGAAGGGGGATGACGAGG 60.383 63.158 0.00 0.00 0.00 4.63
45 46 2.506472 GAAGGGGGATGACGAGGC 59.494 66.667 0.00 0.00 0.00 4.70
46 47 2.041265 AAGGGGGATGACGAGGCT 59.959 61.111 0.00 0.00 0.00 4.58
47 48 0.759436 GAAGGGGGATGACGAGGCTA 60.759 60.000 0.00 0.00 0.00 3.93
48 49 0.326238 AAGGGGGATGACGAGGCTAA 60.326 55.000 0.00 0.00 0.00 3.09
49 50 1.049289 AGGGGGATGACGAGGCTAAC 61.049 60.000 0.00 0.00 0.00 2.34
50 51 1.446366 GGGGATGACGAGGCTAACC 59.554 63.158 0.00 0.00 0.00 2.85
60 61 2.901975 AGGCTAACCTCGCTGATGA 58.098 52.632 0.00 0.00 46.34 2.92
61 62 1.418334 AGGCTAACCTCGCTGATGAT 58.582 50.000 0.00 0.00 46.34 2.45
62 63 1.342819 AGGCTAACCTCGCTGATGATC 59.657 52.381 0.00 0.00 46.34 2.92
63 64 1.069204 GGCTAACCTCGCTGATGATCA 59.931 52.381 0.00 0.00 0.00 2.92
64 65 2.483714 GGCTAACCTCGCTGATGATCAA 60.484 50.000 0.00 0.00 0.00 2.57
65 66 2.541762 GCTAACCTCGCTGATGATCAAC 59.458 50.000 0.00 0.00 0.00 3.18
66 67 2.768253 AACCTCGCTGATGATCAACA 57.232 45.000 5.47 5.47 0.00 3.33
67 68 2.768253 ACCTCGCTGATGATCAACAA 57.232 45.000 7.13 0.00 0.00 2.83
68 69 2.625737 ACCTCGCTGATGATCAACAAG 58.374 47.619 7.13 4.71 0.00 3.16
69 70 2.234661 ACCTCGCTGATGATCAACAAGA 59.765 45.455 7.13 8.47 0.00 3.02
70 71 3.118482 ACCTCGCTGATGATCAACAAGAT 60.118 43.478 7.13 0.00 40.48 2.40
71 72 4.100035 ACCTCGCTGATGATCAACAAGATA 59.900 41.667 7.13 0.00 37.00 1.98
72 73 5.052481 CCTCGCTGATGATCAACAAGATAA 58.948 41.667 7.13 0.00 37.00 1.75
73 74 5.050499 CCTCGCTGATGATCAACAAGATAAC 60.050 44.000 7.13 0.00 37.00 1.89
74 75 5.418676 TCGCTGATGATCAACAAGATAACA 58.581 37.500 7.13 0.00 37.00 2.41
75 76 5.874261 TCGCTGATGATCAACAAGATAACAA 59.126 36.000 7.13 0.00 37.00 2.83
76 77 5.961843 CGCTGATGATCAACAAGATAACAAC 59.038 40.000 7.13 0.00 37.00 3.32
77 78 6.261118 GCTGATGATCAACAAGATAACAACC 58.739 40.000 7.13 0.00 37.00 3.77
78 79 6.127925 GCTGATGATCAACAAGATAACAACCA 60.128 38.462 7.13 0.00 37.00 3.67
79 80 7.144722 TGATGATCAACAAGATAACAACCAC 57.855 36.000 2.74 0.00 37.00 4.16
80 81 5.605564 TGATCAACAAGATAACAACCACG 57.394 39.130 0.00 0.00 37.00 4.94
81 82 4.454161 TGATCAACAAGATAACAACCACGG 59.546 41.667 0.00 0.00 37.00 4.94
82 83 4.074627 TCAACAAGATAACAACCACGGA 57.925 40.909 0.00 0.00 0.00 4.69
83 84 3.810941 TCAACAAGATAACAACCACGGAC 59.189 43.478 0.00 0.00 0.00 4.79
84 85 3.478857 ACAAGATAACAACCACGGACA 57.521 42.857 0.00 0.00 0.00 4.02
85 86 4.015872 ACAAGATAACAACCACGGACAT 57.984 40.909 0.00 0.00 0.00 3.06
86 87 4.000988 ACAAGATAACAACCACGGACATC 58.999 43.478 0.00 0.00 0.00 3.06
87 88 4.253685 CAAGATAACAACCACGGACATCT 58.746 43.478 0.00 0.00 0.00 2.90
88 89 4.553330 AGATAACAACCACGGACATCTT 57.447 40.909 0.00 0.00 0.00 2.40
89 90 4.504858 AGATAACAACCACGGACATCTTC 58.495 43.478 0.00 0.00 0.00 2.87
90 91 2.631160 AACAACCACGGACATCTTCA 57.369 45.000 0.00 0.00 0.00 3.02
91 92 2.631160 ACAACCACGGACATCTTCAA 57.369 45.000 0.00 0.00 0.00 2.69
92 93 2.494059 ACAACCACGGACATCTTCAAG 58.506 47.619 0.00 0.00 0.00 3.02
93 94 1.806542 CAACCACGGACATCTTCAAGG 59.193 52.381 0.00 0.00 0.00 3.61
94 95 1.056660 ACCACGGACATCTTCAAGGT 58.943 50.000 0.00 0.00 0.00 3.50
95 96 1.420138 ACCACGGACATCTTCAAGGTT 59.580 47.619 0.00 0.00 0.00 3.50
96 97 2.635915 ACCACGGACATCTTCAAGGTTA 59.364 45.455 0.00 0.00 0.00 2.85
97 98 3.071892 ACCACGGACATCTTCAAGGTTAA 59.928 43.478 0.00 0.00 0.00 2.01
98 99 4.261801 CCACGGACATCTTCAAGGTTAAT 58.738 43.478 0.00 0.00 0.00 1.40
99 100 4.094887 CCACGGACATCTTCAAGGTTAATG 59.905 45.833 0.00 0.00 0.00 1.90
100 101 4.935205 CACGGACATCTTCAAGGTTAATGA 59.065 41.667 0.00 0.00 0.00 2.57
101 102 5.411361 CACGGACATCTTCAAGGTTAATGAA 59.589 40.000 0.00 0.00 35.60 2.57
102 103 5.411669 ACGGACATCTTCAAGGTTAATGAAC 59.588 40.000 0.00 0.00 33.47 3.18
103 104 5.445939 CGGACATCTTCAAGGTTAATGAACG 60.446 44.000 0.00 0.00 36.32 3.95
104 105 5.163754 GGACATCTTCAAGGTTAATGAACGG 60.164 44.000 0.00 0.00 36.32 4.44
105 106 4.700213 ACATCTTCAAGGTTAATGAACGGG 59.300 41.667 0.00 0.00 36.32 5.28
106 107 4.627284 TCTTCAAGGTTAATGAACGGGA 57.373 40.909 0.00 0.00 36.32 5.14
107 108 5.174037 TCTTCAAGGTTAATGAACGGGAT 57.826 39.130 0.00 0.00 36.32 3.85
108 109 4.941263 TCTTCAAGGTTAATGAACGGGATG 59.059 41.667 0.00 0.00 36.32 3.51
109 110 3.616219 TCAAGGTTAATGAACGGGATGG 58.384 45.455 0.00 0.00 36.32 3.51
110 111 2.687935 CAAGGTTAATGAACGGGATGGG 59.312 50.000 0.00 0.00 36.32 4.00
111 112 1.920351 AGGTTAATGAACGGGATGGGT 59.080 47.619 0.00 0.00 36.32 4.51
112 113 3.116959 AGGTTAATGAACGGGATGGGTA 58.883 45.455 0.00 0.00 36.32 3.69
113 114 3.524380 AGGTTAATGAACGGGATGGGTAA 59.476 43.478 0.00 0.00 36.32 2.85
114 115 4.167307 AGGTTAATGAACGGGATGGGTAAT 59.833 41.667 0.00 0.00 36.32 1.89
115 116 5.370289 AGGTTAATGAACGGGATGGGTAATA 59.630 40.000 0.00 0.00 36.32 0.98
116 117 6.045106 AGGTTAATGAACGGGATGGGTAATAT 59.955 38.462 0.00 0.00 36.32 1.28
117 118 6.150474 GGTTAATGAACGGGATGGGTAATATG 59.850 42.308 0.00 0.00 36.32 1.78
118 119 3.780804 TGAACGGGATGGGTAATATGG 57.219 47.619 0.00 0.00 0.00 2.74
119 120 2.224670 TGAACGGGATGGGTAATATGGC 60.225 50.000 0.00 0.00 0.00 4.40
120 121 0.323629 ACGGGATGGGTAATATGGCG 59.676 55.000 0.00 0.00 0.00 5.69
121 122 1.024579 CGGGATGGGTAATATGGCGC 61.025 60.000 0.00 0.00 0.00 6.53
122 123 0.037590 GGGATGGGTAATATGGCGCA 59.962 55.000 10.83 0.00 0.00 6.09
123 124 1.165270 GGATGGGTAATATGGCGCAC 58.835 55.000 10.83 0.00 0.00 5.34
124 125 1.165270 GATGGGTAATATGGCGCACC 58.835 55.000 10.83 6.78 0.00 5.01
125 126 4.074647 GGGTAATATGGCGCACCC 57.925 61.111 14.84 14.84 43.72 4.61
126 127 1.602605 GGGTAATATGGCGCACCCC 60.603 63.158 18.27 8.04 44.20 4.95
127 128 1.149627 GGTAATATGGCGCACCCCA 59.850 57.895 10.83 0.00 39.65 4.96
128 129 0.251165 GGTAATATGGCGCACCCCAT 60.251 55.000 10.83 5.86 46.90 4.00
131 132 2.423874 TATGGCGCACCCCATACG 59.576 61.111 10.83 0.00 43.65 3.06
132 133 2.436544 TATGGCGCACCCCATACGT 61.437 57.895 10.83 0.00 43.65 3.57
133 134 1.114119 TATGGCGCACCCCATACGTA 61.114 55.000 10.83 0.00 43.65 3.57
134 135 2.279918 GGCGCACCCCATACGTAG 60.280 66.667 10.83 0.00 0.00 3.51
135 136 2.788640 GGCGCACCCCATACGTAGA 61.789 63.158 10.83 0.00 0.00 2.59
136 137 1.299926 GCGCACCCCATACGTAGAG 60.300 63.158 0.30 0.00 0.00 2.43
137 138 1.731433 GCGCACCCCATACGTAGAGA 61.731 60.000 0.30 0.00 0.00 3.10
138 139 0.959553 CGCACCCCATACGTAGAGAT 59.040 55.000 0.08 0.00 0.00 2.75
139 140 1.335964 CGCACCCCATACGTAGAGATG 60.336 57.143 0.08 0.00 0.00 2.90
140 141 1.961394 GCACCCCATACGTAGAGATGA 59.039 52.381 0.08 0.00 0.00 2.92
141 142 2.364324 GCACCCCATACGTAGAGATGAA 59.636 50.000 0.08 0.00 0.00 2.57
142 143 3.799232 GCACCCCATACGTAGAGATGAAC 60.799 52.174 0.08 0.00 0.00 3.18
143 144 2.963782 ACCCCATACGTAGAGATGAACC 59.036 50.000 0.08 0.00 0.00 3.62
144 145 3.231818 CCCCATACGTAGAGATGAACCT 58.768 50.000 0.08 0.00 0.00 3.50
145 146 3.641906 CCCCATACGTAGAGATGAACCTT 59.358 47.826 0.08 0.00 0.00 3.50
146 147 4.831155 CCCCATACGTAGAGATGAACCTTA 59.169 45.833 0.08 0.00 0.00 2.69
147 148 5.278858 CCCCATACGTAGAGATGAACCTTAC 60.279 48.000 0.08 0.00 0.00 2.34
148 149 5.535406 CCCATACGTAGAGATGAACCTTACT 59.465 44.000 0.08 0.00 0.00 2.24
149 150 6.294065 CCCATACGTAGAGATGAACCTTACTC 60.294 46.154 0.08 0.00 0.00 2.59
150 151 4.879104 ACGTAGAGATGAACCTTACTCG 57.121 45.455 0.00 0.00 34.98 4.18
151 152 4.511527 ACGTAGAGATGAACCTTACTCGA 58.488 43.478 0.00 0.00 34.98 4.04
152 153 4.571580 ACGTAGAGATGAACCTTACTCGAG 59.428 45.833 11.84 11.84 34.98 4.04
153 154 4.553156 CGTAGAGATGAACCTTACTCGAGC 60.553 50.000 13.61 0.00 34.98 5.03
154 155 2.356382 AGAGATGAACCTTACTCGAGCG 59.644 50.000 13.61 0.78 34.98 5.03
155 156 1.201343 GATGAACCTTACTCGAGCGC 58.799 55.000 13.61 0.00 0.00 5.92
156 157 0.818296 ATGAACCTTACTCGAGCGCT 59.182 50.000 11.27 11.27 0.00 5.92
157 158 0.170561 TGAACCTTACTCGAGCGCTC 59.829 55.000 27.64 27.64 0.00 5.03
166 167 3.515286 CGAGCGCTCGTCCCCTAA 61.515 66.667 43.16 0.00 46.99 2.69
167 168 2.890371 GAGCGCTCGTCCCCTAAA 59.110 61.111 23.61 0.00 0.00 1.85
168 169 1.518792 GAGCGCTCGTCCCCTAAAC 60.519 63.158 23.61 0.00 0.00 2.01
169 170 2.510918 GCGCTCGTCCCCTAAACC 60.511 66.667 0.00 0.00 0.00 3.27
170 171 2.975536 CGCTCGTCCCCTAAACCA 59.024 61.111 0.00 0.00 0.00 3.67
171 172 1.294138 CGCTCGTCCCCTAAACCAA 59.706 57.895 0.00 0.00 0.00 3.67
172 173 1.017701 CGCTCGTCCCCTAAACCAAC 61.018 60.000 0.00 0.00 0.00 3.77
173 174 0.035739 GCTCGTCCCCTAAACCAACA 59.964 55.000 0.00 0.00 0.00 3.33
174 175 1.339727 GCTCGTCCCCTAAACCAACAT 60.340 52.381 0.00 0.00 0.00 2.71
175 176 2.878526 GCTCGTCCCCTAAACCAACATT 60.879 50.000 0.00 0.00 0.00 2.71
176 177 2.747446 CTCGTCCCCTAAACCAACATTG 59.253 50.000 0.00 0.00 0.00 2.82
186 187 2.780595 CCAACATTGGTAGCGGAGG 58.219 57.895 2.22 0.00 43.43 4.30
187 188 1.376609 CCAACATTGGTAGCGGAGGC 61.377 60.000 2.22 0.00 43.43 4.70
188 189 0.676466 CAACATTGGTAGCGGAGGCA 60.676 55.000 0.00 0.00 43.41 4.75
189 190 0.037590 AACATTGGTAGCGGAGGCAA 59.962 50.000 0.00 0.00 43.41 4.52
190 191 0.676782 ACATTGGTAGCGGAGGCAAC 60.677 55.000 0.00 0.00 43.41 4.17
191 192 0.676466 CATTGGTAGCGGAGGCAACA 60.676 55.000 0.00 0.00 43.41 3.33
192 193 0.037590 ATTGGTAGCGGAGGCAACAA 59.962 50.000 0.00 0.00 43.41 2.83
193 194 0.037590 TTGGTAGCGGAGGCAACAAT 59.962 50.000 0.00 0.00 43.41 2.71
194 195 0.676466 TGGTAGCGGAGGCAACAATG 60.676 55.000 0.00 0.00 43.41 2.82
195 196 1.376609 GGTAGCGGAGGCAACAATGG 61.377 60.000 0.00 0.00 43.41 3.16
196 197 0.392461 GTAGCGGAGGCAACAATGGA 60.392 55.000 0.00 0.00 43.41 3.41
197 198 0.546122 TAGCGGAGGCAACAATGGAT 59.454 50.000 0.00 0.00 43.41 3.41
198 199 1.033746 AGCGGAGGCAACAATGGATG 61.034 55.000 0.00 0.00 43.41 3.51
199 200 1.434696 CGGAGGCAACAATGGATGC 59.565 57.895 4.95 4.95 41.65 3.91
200 201 1.314534 CGGAGGCAACAATGGATGCA 61.315 55.000 13.70 0.00 43.92 3.96
201 202 0.896923 GGAGGCAACAATGGATGCAA 59.103 50.000 13.70 0.00 43.92 4.08
202 203 1.275856 GGAGGCAACAATGGATGCAAA 59.724 47.619 13.70 0.00 43.92 3.68
203 204 2.289569 GGAGGCAACAATGGATGCAAAA 60.290 45.455 13.70 0.00 43.92 2.44
204 205 3.401182 GAGGCAACAATGGATGCAAAAA 58.599 40.909 13.70 0.00 43.92 1.94
223 224 4.841443 AAAAGGTTAGTGGCGGTAAAAG 57.159 40.909 0.00 0.00 0.00 2.27
224 225 2.484742 AGGTTAGTGGCGGTAAAAGG 57.515 50.000 0.00 0.00 0.00 3.11
225 226 1.980036 AGGTTAGTGGCGGTAAAAGGA 59.020 47.619 0.00 0.00 0.00 3.36
226 227 2.574824 AGGTTAGTGGCGGTAAAAGGAT 59.425 45.455 0.00 0.00 0.00 3.24
227 228 2.681344 GGTTAGTGGCGGTAAAAGGATG 59.319 50.000 0.00 0.00 0.00 3.51
228 229 3.602483 GTTAGTGGCGGTAAAAGGATGA 58.398 45.455 0.00 0.00 0.00 2.92
229 230 2.403252 AGTGGCGGTAAAAGGATGAG 57.597 50.000 0.00 0.00 0.00 2.90
230 231 1.065418 AGTGGCGGTAAAAGGATGAGG 60.065 52.381 0.00 0.00 0.00 3.86
231 232 0.254747 TGGCGGTAAAAGGATGAGGG 59.745 55.000 0.00 0.00 0.00 4.30
232 233 0.255033 GGCGGTAAAAGGATGAGGGT 59.745 55.000 0.00 0.00 0.00 4.34
233 234 1.379527 GCGGTAAAAGGATGAGGGTG 58.620 55.000 0.00 0.00 0.00 4.61
234 235 1.065709 GCGGTAAAAGGATGAGGGTGA 60.066 52.381 0.00 0.00 0.00 4.02
235 236 2.617021 GCGGTAAAAGGATGAGGGTGAA 60.617 50.000 0.00 0.00 0.00 3.18
236 237 3.270877 CGGTAAAAGGATGAGGGTGAAG 58.729 50.000 0.00 0.00 0.00 3.02
237 238 3.055385 CGGTAAAAGGATGAGGGTGAAGA 60.055 47.826 0.00 0.00 0.00 2.87
238 239 4.564821 CGGTAAAAGGATGAGGGTGAAGAA 60.565 45.833 0.00 0.00 0.00 2.52
239 240 4.700692 GGTAAAAGGATGAGGGTGAAGAAC 59.299 45.833 0.00 0.00 0.00 3.01
240 241 4.731313 AAAAGGATGAGGGTGAAGAACT 57.269 40.909 0.00 0.00 0.00 3.01
241 242 3.710209 AAGGATGAGGGTGAAGAACTG 57.290 47.619 0.00 0.00 0.00 3.16
242 243 2.907892 AGGATGAGGGTGAAGAACTGA 58.092 47.619 0.00 0.00 0.00 3.41
243 244 3.251484 AGGATGAGGGTGAAGAACTGAA 58.749 45.455 0.00 0.00 0.00 3.02
244 245 3.262915 AGGATGAGGGTGAAGAACTGAAG 59.737 47.826 0.00 0.00 0.00 3.02
245 246 3.261897 GGATGAGGGTGAAGAACTGAAGA 59.738 47.826 0.00 0.00 0.00 2.87
246 247 4.263068 GGATGAGGGTGAAGAACTGAAGAA 60.263 45.833 0.00 0.00 0.00 2.52
247 248 4.342862 TGAGGGTGAAGAACTGAAGAAG 57.657 45.455 0.00 0.00 0.00 2.85
248 249 3.967326 TGAGGGTGAAGAACTGAAGAAGA 59.033 43.478 0.00 0.00 0.00 2.87
249 250 4.039730 TGAGGGTGAAGAACTGAAGAAGAG 59.960 45.833 0.00 0.00 0.00 2.85
250 251 3.326297 AGGGTGAAGAACTGAAGAAGAGG 59.674 47.826 0.00 0.00 0.00 3.69
251 252 3.325135 GGGTGAAGAACTGAAGAAGAGGA 59.675 47.826 0.00 0.00 0.00 3.71
252 253 4.311606 GGTGAAGAACTGAAGAAGAGGAC 58.688 47.826 0.00 0.00 0.00 3.85
253 254 3.984633 GTGAAGAACTGAAGAAGAGGACG 59.015 47.826 0.00 0.00 0.00 4.79
254 255 3.005897 TGAAGAACTGAAGAAGAGGACGG 59.994 47.826 0.00 0.00 0.00 4.79
255 256 2.877866 AGAACTGAAGAAGAGGACGGA 58.122 47.619 0.00 0.00 0.00 4.69
256 257 2.823154 AGAACTGAAGAAGAGGACGGAG 59.177 50.000 0.00 0.00 0.00 4.63
257 258 2.588464 ACTGAAGAAGAGGACGGAGA 57.412 50.000 0.00 0.00 0.00 3.71
258 259 3.094484 ACTGAAGAAGAGGACGGAGAT 57.906 47.619 0.00 0.00 0.00 2.75
259 260 2.757868 ACTGAAGAAGAGGACGGAGATG 59.242 50.000 0.00 0.00 0.00 2.90
260 261 2.100584 CTGAAGAAGAGGACGGAGATGG 59.899 54.545 0.00 0.00 0.00 3.51
261 262 1.410882 GAAGAAGAGGACGGAGATGGG 59.589 57.143 0.00 0.00 0.00 4.00
262 263 0.397816 AGAAGAGGACGGAGATGGGG 60.398 60.000 0.00 0.00 0.00 4.96
263 264 1.383248 AAGAGGACGGAGATGGGGG 60.383 63.158 0.00 0.00 0.00 5.40
264 265 1.886730 AAGAGGACGGAGATGGGGGA 61.887 60.000 0.00 0.00 0.00 4.81
265 266 1.152226 GAGGACGGAGATGGGGGAT 60.152 63.158 0.00 0.00 0.00 3.85
266 267 1.460305 AGGACGGAGATGGGGGATG 60.460 63.158 0.00 0.00 0.00 3.51
267 268 2.520536 GGACGGAGATGGGGGATGG 61.521 68.421 0.00 0.00 0.00 3.51
268 269 2.448542 ACGGAGATGGGGGATGGG 60.449 66.667 0.00 0.00 0.00 4.00
269 270 3.252284 CGGAGATGGGGGATGGGG 61.252 72.222 0.00 0.00 0.00 4.96
270 271 2.860971 GGAGATGGGGGATGGGGG 60.861 72.222 0.00 0.00 0.00 5.40
271 272 2.293934 GAGATGGGGGATGGGGGA 59.706 66.667 0.00 0.00 0.00 4.81
272 273 1.849823 GAGATGGGGGATGGGGGAG 60.850 68.421 0.00 0.00 0.00 4.30
273 274 2.860971 GATGGGGGATGGGGGAGG 60.861 72.222 0.00 0.00 0.00 4.30
274 275 3.394792 ATGGGGGATGGGGGAGGA 61.395 66.667 0.00 0.00 0.00 3.71
275 276 2.951578 GATGGGGGATGGGGGAGGAA 62.952 65.000 0.00 0.00 0.00 3.36
276 277 2.287661 GGGGGATGGGGGAGGAAA 60.288 66.667 0.00 0.00 0.00 3.13
277 278 2.395353 GGGGGATGGGGGAGGAAAG 61.395 68.421 0.00 0.00 0.00 2.62
278 279 1.308746 GGGGATGGGGGAGGAAAGA 60.309 63.158 0.00 0.00 0.00 2.52
279 280 1.356494 GGGGATGGGGGAGGAAAGAG 61.356 65.000 0.00 0.00 0.00 2.85
280 281 1.534203 GGATGGGGGAGGAAAGAGC 59.466 63.158 0.00 0.00 0.00 4.09
281 282 0.990818 GGATGGGGGAGGAAAGAGCT 60.991 60.000 0.00 0.00 0.00 4.09
282 283 1.695989 GGATGGGGGAGGAAAGAGCTA 60.696 57.143 0.00 0.00 0.00 3.32
283 284 2.127708 GATGGGGGAGGAAAGAGCTAA 58.872 52.381 0.00 0.00 0.00 3.09
284 285 2.053747 TGGGGGAGGAAAGAGCTAAA 57.946 50.000 0.00 0.00 0.00 1.85
285 286 2.573463 TGGGGGAGGAAAGAGCTAAAT 58.427 47.619 0.00 0.00 0.00 1.40
286 287 2.242196 TGGGGGAGGAAAGAGCTAAATG 59.758 50.000 0.00 0.00 0.00 2.32
287 288 2.242452 GGGGGAGGAAAGAGCTAAATGT 59.758 50.000 0.00 0.00 0.00 2.71
288 289 3.282885 GGGGAGGAAAGAGCTAAATGTG 58.717 50.000 0.00 0.00 0.00 3.21
289 290 3.308473 GGGGAGGAAAGAGCTAAATGTGT 60.308 47.826 0.00 0.00 0.00 3.72
290 291 3.942115 GGGAGGAAAGAGCTAAATGTGTC 59.058 47.826 0.00 0.00 0.00 3.67
291 292 3.619038 GGAGGAAAGAGCTAAATGTGTCG 59.381 47.826 0.00 0.00 0.00 4.35
292 293 4.495422 GAGGAAAGAGCTAAATGTGTCGA 58.505 43.478 0.00 0.00 0.00 4.20
293 294 4.499183 AGGAAAGAGCTAAATGTGTCGAG 58.501 43.478 0.00 0.00 0.00 4.04
294 295 4.021016 AGGAAAGAGCTAAATGTGTCGAGT 60.021 41.667 0.00 0.00 0.00 4.18
295 296 4.092091 GGAAAGAGCTAAATGTGTCGAGTG 59.908 45.833 0.00 0.00 0.00 3.51
296 297 2.611518 AGAGCTAAATGTGTCGAGTGC 58.388 47.619 0.00 0.00 0.00 4.40
297 298 2.029020 AGAGCTAAATGTGTCGAGTGCA 60.029 45.455 0.00 0.00 0.00 4.57
298 299 2.736721 GAGCTAAATGTGTCGAGTGCAA 59.263 45.455 0.00 0.00 0.00 4.08
299 300 3.138304 AGCTAAATGTGTCGAGTGCAAA 58.862 40.909 0.00 0.00 0.00 3.68
300 301 3.187227 AGCTAAATGTGTCGAGTGCAAAG 59.813 43.478 0.00 0.00 0.00 2.77
301 302 3.186409 GCTAAATGTGTCGAGTGCAAAGA 59.814 43.478 0.00 0.00 0.00 2.52
302 303 3.609103 AAATGTGTCGAGTGCAAAGAC 57.391 42.857 9.66 9.66 35.61 3.01
303 304 2.533266 ATGTGTCGAGTGCAAAGACT 57.467 45.000 15.43 0.00 36.01 3.24
304 305 3.660501 ATGTGTCGAGTGCAAAGACTA 57.339 42.857 15.43 7.73 36.01 2.59
305 306 3.013276 TGTGTCGAGTGCAAAGACTAG 57.987 47.619 15.43 0.00 36.01 2.57
306 307 2.621526 TGTGTCGAGTGCAAAGACTAGA 59.378 45.455 15.43 0.90 36.01 2.43
307 308 3.067601 TGTGTCGAGTGCAAAGACTAGAA 59.932 43.478 15.43 0.00 36.01 2.10
308 309 3.670991 GTGTCGAGTGCAAAGACTAGAAG 59.329 47.826 15.43 0.00 36.01 2.85
309 310 3.246619 GTCGAGTGCAAAGACTAGAAGG 58.753 50.000 0.00 0.00 30.52 3.46
310 311 3.057456 GTCGAGTGCAAAGACTAGAAGGA 60.057 47.826 0.00 0.00 30.52 3.36
311 312 3.191581 TCGAGTGCAAAGACTAGAAGGAG 59.808 47.826 0.00 0.00 0.00 3.69
312 313 3.674682 CGAGTGCAAAGACTAGAAGGAGG 60.675 52.174 0.00 0.00 0.00 4.30
313 314 2.027653 AGTGCAAAGACTAGAAGGAGGC 60.028 50.000 0.00 0.00 0.00 4.70
314 315 1.977854 TGCAAAGACTAGAAGGAGGCA 59.022 47.619 0.00 0.00 0.00 4.75
315 316 2.027745 TGCAAAGACTAGAAGGAGGCAG 60.028 50.000 0.00 0.00 0.00 4.85
316 317 2.234908 GCAAAGACTAGAAGGAGGCAGA 59.765 50.000 0.00 0.00 0.00 4.26
317 318 3.118445 GCAAAGACTAGAAGGAGGCAGAT 60.118 47.826 0.00 0.00 0.00 2.90
318 319 4.625083 GCAAAGACTAGAAGGAGGCAGATT 60.625 45.833 0.00 0.00 0.00 2.40
319 320 5.395768 GCAAAGACTAGAAGGAGGCAGATTA 60.396 44.000 0.00 0.00 0.00 1.75
320 321 6.687647 GCAAAGACTAGAAGGAGGCAGATTAT 60.688 42.308 0.00 0.00 0.00 1.28
321 322 7.278875 CAAAGACTAGAAGGAGGCAGATTATT 58.721 38.462 0.00 0.00 0.00 1.40
322 323 7.444703 AAGACTAGAAGGAGGCAGATTATTT 57.555 36.000 0.00 0.00 0.00 1.40
323 324 6.825610 AGACTAGAAGGAGGCAGATTATTTG 58.174 40.000 0.00 0.00 0.00 2.32
324 325 6.385467 AGACTAGAAGGAGGCAGATTATTTGT 59.615 38.462 0.00 0.00 0.00 2.83
325 326 6.352516 ACTAGAAGGAGGCAGATTATTTGTG 58.647 40.000 0.00 0.00 0.00 3.33
326 327 3.950395 AGAAGGAGGCAGATTATTTGTGC 59.050 43.478 0.00 0.00 36.42 4.57
327 328 3.370840 AGGAGGCAGATTATTTGTGCA 57.629 42.857 0.00 0.00 39.05 4.57
328 329 3.700538 AGGAGGCAGATTATTTGTGCAA 58.299 40.909 0.00 0.00 39.05 4.08
329 330 3.445096 AGGAGGCAGATTATTTGTGCAAC 59.555 43.478 0.00 0.00 39.05 4.17
360 361 8.807581 GTTGGCATATTAAAAATGACACTTAGC 58.192 33.333 8.77 0.00 42.04 3.09
361 362 8.060931 TGGCATATTAAAAATGACACTTAGCA 57.939 30.769 5.77 0.00 37.45 3.49
362 363 8.190122 TGGCATATTAAAAATGACACTTAGCAG 58.810 33.333 5.77 0.00 37.45 4.24
363 364 8.190784 GGCATATTAAAAATGACACTTAGCAGT 58.809 33.333 5.57 0.00 32.26 4.40
364 365 9.226345 GCATATTAAAAATGACACTTAGCAGTC 57.774 33.333 5.57 0.00 35.37 3.51
376 377 9.448438 TGACACTTAGCAGTCATATTGTATTTT 57.552 29.630 4.36 0.00 39.65 1.82
379 380 9.507280 CACTTAGCAGTCATATTGTATTTTTGG 57.493 33.333 0.00 0.00 0.00 3.28
380 381 9.243105 ACTTAGCAGTCATATTGTATTTTTGGT 57.757 29.630 0.00 0.00 0.00 3.67
383 384 8.761575 AGCAGTCATATTGTATTTTTGGTTTG 57.238 30.769 0.00 0.00 0.00 2.93
384 385 7.331687 AGCAGTCATATTGTATTTTTGGTTTGC 59.668 33.333 0.00 0.00 0.00 3.68
385 386 7.117523 GCAGTCATATTGTATTTTTGGTTTGCA 59.882 33.333 0.00 0.00 0.00 4.08
386 387 9.153721 CAGTCATATTGTATTTTTGGTTTGCAT 57.846 29.630 0.00 0.00 0.00 3.96
387 388 9.723601 AGTCATATTGTATTTTTGGTTTGCATT 57.276 25.926 0.00 0.00 0.00 3.56
394 395 9.823647 TTGTATTTTTGGTTTGCATTTCTTAGA 57.176 25.926 0.00 0.00 0.00 2.10
395 396 9.255304 TGTATTTTTGGTTTGCATTTCTTAGAC 57.745 29.630 0.00 0.00 0.00 2.59
396 397 9.255304 GTATTTTTGGTTTGCATTTCTTAGACA 57.745 29.630 0.00 0.00 0.00 3.41
397 398 8.729805 ATTTTTGGTTTGCATTTCTTAGACAA 57.270 26.923 0.00 0.00 0.00 3.18
398 399 7.769272 TTTTGGTTTGCATTTCTTAGACAAG 57.231 32.000 0.00 0.00 0.00 3.16
399 400 6.463995 TTGGTTTGCATTTCTTAGACAAGT 57.536 33.333 0.00 0.00 33.20 3.16
400 401 7.575414 TTGGTTTGCATTTCTTAGACAAGTA 57.425 32.000 0.00 0.00 33.20 2.24
401 402 7.202016 TGGTTTGCATTTCTTAGACAAGTAG 57.798 36.000 0.00 0.00 33.20 2.57
402 403 6.206634 TGGTTTGCATTTCTTAGACAAGTAGG 59.793 38.462 0.00 0.00 33.20 3.18
403 404 6.430000 GGTTTGCATTTCTTAGACAAGTAGGA 59.570 38.462 0.00 0.00 33.20 2.94
407 408 9.733556 TTGCATTTCTTAGACAAGTAGGAAATA 57.266 29.630 0.00 0.00 36.87 1.40
420 421 8.751242 ACAAGTAGGAAATAGAAGTTCTAGACC 58.249 37.037 17.31 17.50 31.67 3.85
440 443 7.085052 AGACCTTTTGTAACTCAAACACTTC 57.915 36.000 0.00 0.00 44.39 3.01
453 456 8.237811 ACTCAAACACTTCTAATTTTGACCAT 57.762 30.769 0.00 0.00 34.90 3.55
674 684 2.158943 AGCCGAGTAAGAAATAGTGGCC 60.159 50.000 0.00 0.00 42.14 5.36
695 707 5.932883 GGCCCACCGTAATAATTTTCAAAAA 59.067 36.000 0.00 0.00 0.00 1.94
723 735 2.109181 GATGCTACACGGAGGGGC 59.891 66.667 0.00 0.00 0.00 5.80
805 856 1.418097 ATCCAGCACTCACACCACCA 61.418 55.000 0.00 0.00 0.00 4.17
808 859 2.072487 AGCACTCACACCACCACCT 61.072 57.895 0.00 0.00 0.00 4.00
811 862 2.343758 CTCACACCACCACCTCCG 59.656 66.667 0.00 0.00 0.00 4.63
812 863 3.238497 TCACACCACCACCTCCGG 61.238 66.667 0.00 0.00 0.00 5.14
928 993 2.822637 CCCAGCACTCACACCACCT 61.823 63.158 0.00 0.00 0.00 4.00
996 1067 1.208165 CCAAGCACCCTAACCCTCCT 61.208 60.000 0.00 0.00 0.00 3.69
1390 1781 1.340114 GCCTCCCCCTTGTCTTAGTTG 60.340 57.143 0.00 0.00 0.00 3.16
1505 1896 2.126307 CGTGTCCGTGCCTCTGAG 60.126 66.667 0.00 0.00 0.00 3.35
1524 1915 1.141645 GCGTGTCCGAAATGTGTGTA 58.858 50.000 0.00 0.00 35.63 2.90
1719 2110 5.163550 GCCCCTTTTGGAGATATGTGTTAAC 60.164 44.000 0.00 0.00 44.07 2.01
1723 2114 7.362056 CCCTTTTGGAGATATGTGTTAACTGTG 60.362 40.741 7.22 0.00 44.07 3.66
1733 2124 3.625764 TGTGTTAACTGTGAAGGCAAGTC 59.374 43.478 7.22 0.00 0.00 3.01
1740 2135 4.265073 ACTGTGAAGGCAAGTCCATTATC 58.735 43.478 0.00 0.00 37.29 1.75
1760 2155 2.138320 CTGTTCGTGACTGCACAATCT 58.862 47.619 0.00 0.00 45.41 2.40
1764 2159 2.946564 TCGTGACTGCACAATCTAGTG 58.053 47.619 0.00 0.00 45.41 2.74
1765 2160 2.296190 TCGTGACTGCACAATCTAGTGT 59.704 45.455 0.00 0.00 45.41 3.55
1787 2206 4.035675 GTGATGCACTTATGTAGAAAGCCC 59.964 45.833 0.00 0.00 0.00 5.19
1791 2210 3.248602 GCACTTATGTAGAAAGCCCGATG 59.751 47.826 0.00 0.00 0.00 3.84
1795 2214 2.203015 TAGAAAGCCCGATGCCGC 60.203 61.111 0.00 0.00 42.71 6.53
1805 2224 2.514013 CGATGCCGCGTTGAGTACC 61.514 63.158 4.92 0.00 0.00 3.34
1841 2265 1.072806 AGTTCAGACAGGCAGCATGAA 59.927 47.619 15.39 3.25 39.69 2.57
1884 2308 3.074412 CCCTATGGTTGTTCACAGTCAC 58.926 50.000 0.00 0.00 0.00 3.67
1915 2339 2.086869 AGTCCGTTGATGATGGCAAAG 58.913 47.619 0.00 0.00 34.15 2.77
1961 2385 1.678970 GGGACTGGTGGATGGCAAC 60.679 63.158 0.00 0.00 0.00 4.17
2065 2489 4.996122 CGAGATAACTACTCCTCATACGGT 59.004 45.833 0.00 0.00 0.00 4.83
2066 2490 6.015095 TCGAGATAACTACTCCTCATACGGTA 60.015 42.308 0.00 0.00 0.00 4.02
2067 2491 6.090628 CGAGATAACTACTCCTCATACGGTAC 59.909 46.154 0.00 0.00 0.00 3.34
2086 2513 5.766222 GGTACGGGTCATGTACTTATGTAG 58.234 45.833 0.00 0.00 41.47 2.74
2210 2800 6.481954 CACAGAGGGTGTTAATTAGTTGAC 57.518 41.667 0.00 0.00 42.75 3.18
2217 2833 4.201881 GGTGTTAATTAGTTGACGATGGCC 60.202 45.833 0.00 0.00 0.00 5.36
2244 2861 1.717937 CTGCGCATGTAGGTTCAGC 59.282 57.895 12.24 0.00 0.00 4.26
2284 2901 8.388484 AGATGGCAATTCTCACTATATGTTTC 57.612 34.615 0.00 0.00 0.00 2.78
2292 2909 6.459670 TCTCACTATATGTTTCGCTACCAA 57.540 37.500 0.00 0.00 0.00 3.67
2375 2992 2.223947 TGCGTATATGGTTCGACATGCT 60.224 45.455 0.00 0.00 32.39 3.79
2416 3033 0.179100 TGAAGCAGCGTCTATCAGCC 60.179 55.000 9.88 0.00 0.00 4.85
2417 3034 0.179100 GAAGCAGCGTCTATCAGCCA 60.179 55.000 0.37 0.00 0.00 4.75
2418 3035 0.467384 AAGCAGCGTCTATCAGCCAT 59.533 50.000 0.00 0.00 0.00 4.40
2419 3036 1.332195 AGCAGCGTCTATCAGCCATA 58.668 50.000 0.00 0.00 0.00 2.74
2420 3037 1.271934 AGCAGCGTCTATCAGCCATAG 59.728 52.381 0.00 0.00 36.50 2.23
2421 3038 1.707632 CAGCGTCTATCAGCCATAGC 58.292 55.000 0.00 0.00 35.27 2.97
2422 3039 0.605589 AGCGTCTATCAGCCATAGCC 59.394 55.000 0.00 0.00 41.25 3.93
2434 3051 2.981784 AGCCATAGCCCATAAGACATGA 59.018 45.455 0.00 0.00 41.25 3.07
2490 3113 1.790387 CTTCCTGTGCTTACGCTGC 59.210 57.895 0.00 0.00 36.97 5.25
2509 3132 4.495349 GCTGCTTATGTGCTTCAGTGTATG 60.495 45.833 0.00 0.00 0.00 2.39
2540 3178 4.038763 ACACCACTAGATCGTTGTGAAAGA 59.961 41.667 14.33 0.00 35.01 2.52
2603 3242 6.798482 TGATCAAGTGCCATATCATTCAAAC 58.202 36.000 0.00 0.00 0.00 2.93
2649 3288 6.490381 AGCGATAGTCAGAATGGAGTATTACA 59.510 38.462 0.00 0.00 34.38 2.41
2652 3291 8.300286 CGATAGTCAGAATGGAGTATTACATGT 58.700 37.037 2.69 2.69 34.38 3.21
2719 3359 6.558009 ACTATGATAGCTTGCATGTGTTTTG 58.442 36.000 10.30 0.00 0.00 2.44
2808 3456 9.660180 GGAGTATTTCTAGAATTCAGTGACTTT 57.340 33.333 5.89 0.00 0.00 2.66
2856 3635 6.838198 TGTAGTGACAAAACATGTAGTGAC 57.162 37.500 13.99 10.48 44.12 3.67
2857 3636 6.342111 TGTAGTGACAAAACATGTAGTGACA 58.658 36.000 13.99 11.32 44.12 3.58
2860 3639 7.151999 AGTGACAAAACATGTAGTGACAAAA 57.848 32.000 13.99 0.00 44.12 2.44
2879 3658 5.105554 ACAAAACATGTAGTGCTTTTGGTGA 60.106 36.000 18.02 0.00 41.63 4.02
2896 3675 3.392595 GAAGCTGCAGCCGTCATGC 62.393 63.158 34.39 11.36 43.38 4.06
2901 3680 2.743538 GCAGCCGTCATGCACTCA 60.744 61.111 0.00 0.00 43.31 3.41
2902 3681 2.110967 GCAGCCGTCATGCACTCAT 61.111 57.895 0.00 0.00 43.31 2.90
2955 3735 3.251729 GTCACAATGTTCTCATGTGTGCT 59.748 43.478 5.69 0.00 39.66 4.40
2956 3736 4.452114 GTCACAATGTTCTCATGTGTGCTA 59.548 41.667 5.69 0.00 39.66 3.49
3063 3849 2.949177 TCTTTTGCACTAGGCCAGAA 57.051 45.000 5.01 0.00 43.89 3.02
3064 3850 3.439857 TCTTTTGCACTAGGCCAGAAT 57.560 42.857 5.01 0.00 43.89 2.40
3065 3851 3.084039 TCTTTTGCACTAGGCCAGAATG 58.916 45.455 5.01 0.00 43.89 2.67
3066 3852 2.584835 TTTGCACTAGGCCAGAATGT 57.415 45.000 5.01 0.00 43.89 2.71
3067 3853 2.113860 TTGCACTAGGCCAGAATGTC 57.886 50.000 5.01 0.00 43.89 3.06
3068 3854 0.983467 TGCACTAGGCCAGAATGTCA 59.017 50.000 5.01 0.00 43.89 3.58
3069 3855 1.561076 TGCACTAGGCCAGAATGTCAT 59.439 47.619 5.01 0.00 43.89 3.06
3070 3856 2.771372 TGCACTAGGCCAGAATGTCATA 59.229 45.455 5.01 0.00 43.89 2.15
3075 3861 1.141657 AGGCCAGAATGTCATATGCGT 59.858 47.619 5.01 0.00 0.00 5.24
3083 3869 2.647529 TGTCATATGCGTCGTGACTT 57.352 45.000 19.28 0.00 42.03 3.01
3110 3896 2.540515 AGTCACTGTCGTGTTCAGTTG 58.459 47.619 0.00 0.00 43.14 3.16
3118 3904 1.872952 TCGTGTTCAGTTGCTCAATGG 59.127 47.619 0.00 0.00 0.00 3.16
3147 3933 8.939929 CATGACTTAACAGTGTATGTCTGAAAT 58.060 33.333 17.91 6.45 43.00 2.17
3164 3950 8.210946 TGTCTGAAATATTTAGATGGGTTCGAT 58.789 33.333 0.00 0.00 0.00 3.59
3165 3951 8.499162 GTCTGAAATATTTAGATGGGTTCGATG 58.501 37.037 0.00 0.00 0.00 3.84
3166 3952 8.428852 TCTGAAATATTTAGATGGGTTCGATGA 58.571 33.333 0.00 0.00 0.00 2.92
3167 3953 8.972458 TGAAATATTTAGATGGGTTCGATGAA 57.028 30.769 0.00 0.00 0.00 2.57
3168 3954 8.836413 TGAAATATTTAGATGGGTTCGATGAAC 58.164 33.333 0.00 1.09 41.32 3.18
3169 3955 8.746052 AAATATTTAGATGGGTTCGATGAACA 57.254 30.769 11.39 0.00 43.54 3.18
3170 3956 8.924511 AATATTTAGATGGGTTCGATGAACAT 57.075 30.769 11.39 0.00 43.54 2.71
3171 3957 6.624352 ATTTAGATGGGTTCGATGAACATG 57.376 37.500 11.39 0.00 43.54 3.21
3172 3958 3.634397 AGATGGGTTCGATGAACATGT 57.366 42.857 11.39 0.00 43.54 3.21
3173 3959 3.955471 AGATGGGTTCGATGAACATGTT 58.045 40.909 11.78 11.78 43.54 2.71
3174 3960 3.691118 AGATGGGTTCGATGAACATGTTG 59.309 43.478 17.58 1.06 43.54 3.33
3175 3961 2.857483 TGGGTTCGATGAACATGTTGT 58.143 42.857 17.58 4.11 43.54 3.32
3176 3962 2.551887 TGGGTTCGATGAACATGTTGTG 59.448 45.455 17.58 2.77 43.54 3.33
3177 3963 2.584791 GGTTCGATGAACATGTTGTGC 58.415 47.619 17.58 1.95 43.54 4.57
3178 3964 2.031245 GGTTCGATGAACATGTTGTGCA 60.031 45.455 17.58 8.43 43.54 4.57
3180 3966 4.142708 GGTTCGATGAACATGTTGTGCATA 60.143 41.667 17.58 0.00 46.30 3.14
3181 3967 5.449041 GGTTCGATGAACATGTTGTGCATAT 60.449 40.000 17.58 0.61 46.30 1.78
3182 3968 5.816449 TCGATGAACATGTTGTGCATATT 57.184 34.783 17.58 0.00 46.30 1.28
3183 3969 6.193514 TCGATGAACATGTTGTGCATATTT 57.806 33.333 17.58 0.00 46.30 1.40
3242 4046 6.706270 TCATCTTAGTTCTTTTGTGACACTCC 59.294 38.462 7.20 0.00 0.00 3.85
3526 4330 4.464008 TCCATAGGAATGATGCACCTTTC 58.536 43.478 0.00 0.00 34.84 2.62
3529 4333 2.359900 AGGAATGATGCACCTTTCGTC 58.640 47.619 0.85 0.00 0.00 4.20
3679 4483 0.542333 TCGACACCCTTGTTTGGTCA 59.458 50.000 0.00 0.00 35.47 4.02
3937 4741 1.446907 GACTCTTCACCTACGACGGA 58.553 55.000 0.00 0.00 0.00 4.69
4072 4876 1.115930 ATAGGTACAGGGAGCTGCCG 61.116 60.000 19.62 15.83 37.63 5.69
4183 4987 1.978097 TCGTACGCGTTCAACATGTAC 59.022 47.619 20.78 4.77 39.49 2.90
4255 5059 1.878522 GATCGTGACGGCGAATGCT 60.879 57.895 16.62 0.00 44.38 3.79
4395 5199 1.990060 GGCAGGGGAGTGAGCACTA 60.990 63.158 2.65 0.00 42.66 2.74
4433 5240 4.058124 GTCAGAAGCTGTTACATGACACA 58.942 43.478 10.13 0.17 37.56 3.72
4452 5259 2.670148 GGGGAGAGCACCGGATTGT 61.670 63.158 9.46 0.00 0.00 2.71
4461 5268 0.391661 CACCGGATTGTGAGAGTGGG 60.392 60.000 9.46 0.00 38.55 4.61
4555 5362 2.288666 GACAGTCTCACAAGGCAACAA 58.711 47.619 0.00 0.00 41.41 2.83
4564 5371 5.184096 TCTCACAAGGCAACAAGTGTAAAAA 59.816 36.000 0.00 0.00 42.23 1.94
4586 5393 1.428448 TCTGAATTTCCAGCACGTCG 58.572 50.000 0.00 0.00 34.28 5.12
4590 5397 2.415168 TGAATTTCCAGCACGTCGATTC 59.585 45.455 0.00 0.00 0.00 2.52
4592 5399 1.011968 TTTCCAGCACGTCGATTCCG 61.012 55.000 0.00 0.00 37.07 4.30
4636 5444 0.316204 CAGCAAGGCTTCCAGGTTTG 59.684 55.000 0.00 0.00 36.40 2.93
4656 5464 1.602377 GTGTTTGACACCACAGCTACC 59.398 52.381 0.00 0.00 43.05 3.18
4657 5465 1.488812 TGTTTGACACCACAGCTACCT 59.511 47.619 0.00 0.00 0.00 3.08
4658 5466 1.873591 GTTTGACACCACAGCTACCTG 59.126 52.381 0.00 0.00 44.80 4.00
4670 5478 1.978580 AGCTACCTGCCTGTTTACTGT 59.021 47.619 0.00 0.00 44.23 3.55
4671 5479 2.076863 GCTACCTGCCTGTTTACTGTG 58.923 52.381 0.00 0.00 35.15 3.66
4672 5480 2.076863 CTACCTGCCTGTTTACTGTGC 58.923 52.381 0.00 0.00 0.00 4.57
4674 5482 0.877071 CCTGCCTGTTTACTGTGCAG 59.123 55.000 16.08 16.08 46.82 4.41
4694 5502 2.158652 AGTAGTCAGCCTGAGCCGTATA 60.159 50.000 0.00 0.00 41.25 1.47
4695 5503 2.002505 AGTCAGCCTGAGCCGTATAT 57.997 50.000 0.00 0.00 41.25 0.86
4696 5504 1.615883 AGTCAGCCTGAGCCGTATATG 59.384 52.381 0.00 0.00 41.25 1.78
4697 5505 1.613925 GTCAGCCTGAGCCGTATATGA 59.386 52.381 0.00 0.00 41.25 2.15
4698 5506 2.232452 GTCAGCCTGAGCCGTATATGAT 59.768 50.000 0.00 0.00 41.25 2.45
4712 5520 4.500837 CGTATATGATACGGAATGAGCAGC 59.499 45.833 10.46 0.00 37.29 5.25
4716 5524 1.262683 GATACGGAATGAGCAGCTTGC 59.737 52.381 0.00 0.47 45.46 4.01
4776 5588 4.406648 TCTGGATGTATGAACTGCGAAT 57.593 40.909 0.00 0.00 0.00 3.34
4778 5590 3.205338 TGGATGTATGAACTGCGAATGG 58.795 45.455 0.00 0.00 0.00 3.16
4797 5609 4.987408 TGGAACATGTATTTCAGCATGG 57.013 40.909 0.00 0.00 44.74 3.66
4804 5616 1.105457 TATTTCAGCATGGCAGGCAC 58.895 50.000 27.04 0.00 36.16 5.01
4805 5617 1.940883 ATTTCAGCATGGCAGGCACG 61.941 55.000 27.04 16.59 36.16 5.34
4853 5665 6.971726 TTCTGTCTGTTCCTTGAGTTACTA 57.028 37.500 0.00 0.00 0.00 1.82
4903 5764 9.950680 TTATCTGTTGATTTTCAGTTCTTGTTC 57.049 29.630 0.00 0.00 34.32 3.18
4923 5784 0.871722 TAATTGCGTGCGCTCTTTGT 59.128 45.000 17.49 0.56 42.51 2.83
4943 5804 3.460340 TGTCCCAGTTTCAGTTCCCTTTA 59.540 43.478 0.00 0.00 0.00 1.85
4950 5811 6.265422 CCAGTTTCAGTTCCCTTTATCTGTTT 59.735 38.462 0.00 0.00 0.00 2.83
4956 5817 8.934023 TCAGTTCCCTTTATCTGTTTTACAAT 57.066 30.769 0.00 0.00 0.00 2.71
4958 5819 9.626045 CAGTTCCCTTTATCTGTTTTACAATTC 57.374 33.333 0.00 0.00 0.00 2.17
4959 5820 9.362151 AGTTCCCTTTATCTGTTTTACAATTCA 57.638 29.630 0.00 0.00 0.00 2.57
4961 5822 9.581289 TTCCCTTTATCTGTTTTACAATTCAGA 57.419 29.630 0.00 0.00 40.43 3.27
4990 5858 9.350951 AGTTAGCTTGTGGTTTATTCTAAAGTT 57.649 29.630 0.00 0.00 0.00 2.66
4991 5859 9.961265 GTTAGCTTGTGGTTTATTCTAAAGTTT 57.039 29.630 0.00 0.00 0.00 2.66
5032 5900 9.948964 GGTTTATTCTAAAGTAGAACCCAGTTA 57.051 33.333 0.00 0.00 46.58 2.24
5048 5916 9.343539 GAACCCAGTTATTGCTTTTCTATATCT 57.656 33.333 0.00 0.00 0.00 1.98
5066 5938 3.247056 TTGATGAACCGCGAGCCCA 62.247 57.895 8.23 0.00 0.00 5.36
5067 5939 2.435938 GATGAACCGCGAGCCCAA 60.436 61.111 8.23 0.00 0.00 4.12
5086 5962 2.241176 CAAAGGAATGGGCCTACCTACA 59.759 50.000 14.74 0.00 37.26 2.74
5087 5963 1.807814 AGGAATGGGCCTACCTACAG 58.192 55.000 4.53 0.00 41.11 2.74
5090 5966 2.421529 GGAATGGGCCTACCTACAGTTG 60.422 54.545 4.53 0.00 41.11 3.16
5092 5968 2.627148 TGGGCCTACCTACAGTTGTA 57.373 50.000 4.53 0.00 41.11 2.41
5093 5969 2.181975 TGGGCCTACCTACAGTTGTAC 58.818 52.381 4.53 0.00 41.11 2.90
5124 6032 2.378547 AGTTATCTCCTGGGCCAAAACA 59.621 45.455 8.04 0.00 0.00 2.83
5143 6051 0.752009 AGGCCTCAAGCTCGTCGATA 60.752 55.000 0.00 0.00 43.05 2.92
5150 6058 4.320861 CCTCAAGCTCGTCGATAATCTCAT 60.321 45.833 0.00 0.00 0.00 2.90
5151 6059 5.188327 TCAAGCTCGTCGATAATCTCATT 57.812 39.130 0.00 0.00 0.00 2.57
5271 6179 0.310854 CAGCAAGGACCGGTGTTTTC 59.689 55.000 14.63 0.00 0.00 2.29
5275 6183 2.928642 AAGGACCGGTGTTTTCGCGT 62.929 55.000 14.63 0.00 0.00 6.01
5281 6189 1.837538 CGGTGTTTTCGCGTGGACAT 61.838 55.000 5.77 0.00 0.00 3.06
5305 6213 5.418840 TCCTCTGGTTATGAGAAAAATTGCC 59.581 40.000 0.00 0.00 33.68 4.52
5314 6222 2.228822 GAGAAAAATTGCCGCAGAAGGA 59.771 45.455 0.00 0.00 0.00 3.36
5316 6224 4.016444 AGAAAAATTGCCGCAGAAGGATA 58.984 39.130 0.00 0.00 0.00 2.59
5324 6232 3.876914 TGCCGCAGAAGGATAAATGTTAG 59.123 43.478 0.00 0.00 0.00 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.034878 CCCATTCTCTCAGATCCGACA 58.965 52.381 0.00 0.00 0.00 4.35
1 2 1.270041 GCCCATTCTCTCAGATCCGAC 60.270 57.143 0.00 0.00 0.00 4.79
2 3 1.043816 GCCCATTCTCTCAGATCCGA 58.956 55.000 0.00 0.00 0.00 4.55
3 4 0.319383 CGCCCATTCTCTCAGATCCG 60.319 60.000 0.00 0.00 0.00 4.18
4 5 0.034616 CCGCCCATTCTCTCAGATCC 59.965 60.000 0.00 0.00 0.00 3.36
5 6 0.034616 CCCGCCCATTCTCTCAGATC 59.965 60.000 0.00 0.00 0.00 2.75
6 7 1.414061 CCCCGCCCATTCTCTCAGAT 61.414 60.000 0.00 0.00 0.00 2.90
7 8 2.066393 CCCCGCCCATTCTCTCAGA 61.066 63.158 0.00 0.00 0.00 3.27
8 9 2.037620 CTCCCCGCCCATTCTCTCAG 62.038 65.000 0.00 0.00 0.00 3.35
9 10 2.040442 TCCCCGCCCATTCTCTCA 59.960 61.111 0.00 0.00 0.00 3.27
10 11 2.812619 CCTCCCCGCCCATTCTCTC 61.813 68.421 0.00 0.00 0.00 3.20
11 12 2.770048 CCTCCCCGCCCATTCTCT 60.770 66.667 0.00 0.00 0.00 3.10
12 13 2.330924 CTTCCTCCCCGCCCATTCTC 62.331 65.000 0.00 0.00 0.00 2.87
13 14 2.286121 TTCCTCCCCGCCCATTCT 60.286 61.111 0.00 0.00 0.00 2.40
14 15 2.193248 CTTCCTCCCCGCCCATTC 59.807 66.667 0.00 0.00 0.00 2.67
15 16 3.420482 CCTTCCTCCCCGCCCATT 61.420 66.667 0.00 0.00 0.00 3.16
21 22 3.171388 CATCCCCCTTCCTCCCCG 61.171 72.222 0.00 0.00 0.00 5.73
22 23 2.079288 GTCATCCCCCTTCCTCCCC 61.079 68.421 0.00 0.00 0.00 4.81
23 24 2.444256 CGTCATCCCCCTTCCTCCC 61.444 68.421 0.00 0.00 0.00 4.30
24 25 1.382695 TCGTCATCCCCCTTCCTCC 60.383 63.158 0.00 0.00 0.00 4.30
25 26 1.403687 CCTCGTCATCCCCCTTCCTC 61.404 65.000 0.00 0.00 0.00 3.71
26 27 1.383248 CCTCGTCATCCCCCTTCCT 60.383 63.158 0.00 0.00 0.00 3.36
27 28 3.108288 GCCTCGTCATCCCCCTTCC 62.108 68.421 0.00 0.00 0.00 3.46
28 29 0.759436 TAGCCTCGTCATCCCCCTTC 60.759 60.000 0.00 0.00 0.00 3.46
29 30 0.326238 TTAGCCTCGTCATCCCCCTT 60.326 55.000 0.00 0.00 0.00 3.95
30 31 1.049289 GTTAGCCTCGTCATCCCCCT 61.049 60.000 0.00 0.00 0.00 4.79
31 32 1.446366 GTTAGCCTCGTCATCCCCC 59.554 63.158 0.00 0.00 0.00 5.40
32 33 1.049289 AGGTTAGCCTCGTCATCCCC 61.049 60.000 0.00 0.00 42.67 4.81
33 34 2.517609 AGGTTAGCCTCGTCATCCC 58.482 57.895 0.00 0.00 42.67 3.85
43 44 1.069204 TGATCATCAGCGAGGTTAGCC 59.931 52.381 0.00 0.00 34.64 3.93
44 45 2.515926 TGATCATCAGCGAGGTTAGC 57.484 50.000 0.00 0.00 0.00 3.09
45 46 3.785486 TGTTGATCATCAGCGAGGTTAG 58.215 45.455 2.22 0.00 29.60 2.34
46 47 3.885724 TGTTGATCATCAGCGAGGTTA 57.114 42.857 2.22 0.00 29.60 2.85
47 48 2.768253 TGTTGATCATCAGCGAGGTT 57.232 45.000 2.22 0.00 29.60 3.50
48 49 2.234661 TCTTGTTGATCATCAGCGAGGT 59.765 45.455 16.57 0.00 38.96 3.85
49 50 2.897436 TCTTGTTGATCATCAGCGAGG 58.103 47.619 16.57 1.40 38.96 4.63
50 51 5.521372 TGTTATCTTGTTGATCATCAGCGAG 59.479 40.000 11.70 11.70 39.57 5.03
51 52 5.418676 TGTTATCTTGTTGATCATCAGCGA 58.581 37.500 6.57 8.03 36.65 4.93
52 53 5.723492 TGTTATCTTGTTGATCATCAGCG 57.277 39.130 6.57 3.43 36.65 5.18
53 54 6.127925 TGGTTGTTATCTTGTTGATCATCAGC 60.128 38.462 6.57 0.00 36.65 4.26
54 55 7.246311 GTGGTTGTTATCTTGTTGATCATCAG 58.754 38.462 6.57 0.00 36.65 2.90
55 56 6.128309 CGTGGTTGTTATCTTGTTGATCATCA 60.128 38.462 2.22 2.22 36.65 3.07
56 57 6.250819 CGTGGTTGTTATCTTGTTGATCATC 58.749 40.000 0.00 0.00 36.65 2.92
57 58 5.123820 CCGTGGTTGTTATCTTGTTGATCAT 59.876 40.000 0.00 0.00 36.65 2.45
58 59 4.454161 CCGTGGTTGTTATCTTGTTGATCA 59.546 41.667 0.00 0.00 36.65 2.92
59 60 4.693566 TCCGTGGTTGTTATCTTGTTGATC 59.306 41.667 0.00 0.00 36.65 2.92
60 61 4.454504 GTCCGTGGTTGTTATCTTGTTGAT 59.545 41.667 0.00 0.00 39.11 2.57
61 62 3.810941 GTCCGTGGTTGTTATCTTGTTGA 59.189 43.478 0.00 0.00 0.00 3.18
62 63 3.562141 TGTCCGTGGTTGTTATCTTGTTG 59.438 43.478 0.00 0.00 0.00 3.33
63 64 3.811083 TGTCCGTGGTTGTTATCTTGTT 58.189 40.909 0.00 0.00 0.00 2.83
64 65 3.478857 TGTCCGTGGTTGTTATCTTGT 57.521 42.857 0.00 0.00 0.00 3.16
65 66 4.253685 AGATGTCCGTGGTTGTTATCTTG 58.746 43.478 0.00 0.00 0.00 3.02
66 67 4.553330 AGATGTCCGTGGTTGTTATCTT 57.447 40.909 0.00 0.00 0.00 2.40
67 68 4.020573 TGAAGATGTCCGTGGTTGTTATCT 60.021 41.667 0.00 0.00 0.00 1.98
68 69 4.250464 TGAAGATGTCCGTGGTTGTTATC 58.750 43.478 0.00 0.00 0.00 1.75
69 70 4.280436 TGAAGATGTCCGTGGTTGTTAT 57.720 40.909 0.00 0.00 0.00 1.89
70 71 3.755112 TGAAGATGTCCGTGGTTGTTA 57.245 42.857 0.00 0.00 0.00 2.41
71 72 2.631160 TGAAGATGTCCGTGGTTGTT 57.369 45.000 0.00 0.00 0.00 2.83
72 73 2.494059 CTTGAAGATGTCCGTGGTTGT 58.506 47.619 0.00 0.00 0.00 3.32
73 74 1.806542 CCTTGAAGATGTCCGTGGTTG 59.193 52.381 0.00 0.00 0.00 3.77
74 75 1.420138 ACCTTGAAGATGTCCGTGGTT 59.580 47.619 0.00 0.00 0.00 3.67
75 76 1.056660 ACCTTGAAGATGTCCGTGGT 58.943 50.000 0.00 0.00 0.00 4.16
76 77 2.185004 AACCTTGAAGATGTCCGTGG 57.815 50.000 0.00 0.00 0.00 4.94
77 78 4.935205 TCATTAACCTTGAAGATGTCCGTG 59.065 41.667 0.00 0.00 0.00 4.94
78 79 5.160607 TCATTAACCTTGAAGATGTCCGT 57.839 39.130 0.00 0.00 0.00 4.69
79 80 5.445939 CGTTCATTAACCTTGAAGATGTCCG 60.446 44.000 0.00 0.00 33.95 4.79
80 81 5.163754 CCGTTCATTAACCTTGAAGATGTCC 60.164 44.000 0.00 0.00 33.95 4.02
81 82 5.163754 CCCGTTCATTAACCTTGAAGATGTC 60.164 44.000 0.00 0.00 33.95 3.06
82 83 4.700213 CCCGTTCATTAACCTTGAAGATGT 59.300 41.667 0.00 0.00 33.95 3.06
83 84 4.941263 TCCCGTTCATTAACCTTGAAGATG 59.059 41.667 0.00 0.00 33.95 2.90
84 85 5.174037 TCCCGTTCATTAACCTTGAAGAT 57.826 39.130 0.00 0.00 33.95 2.40
85 86 4.627284 TCCCGTTCATTAACCTTGAAGA 57.373 40.909 0.00 0.00 33.95 2.87
86 87 4.096382 CCATCCCGTTCATTAACCTTGAAG 59.904 45.833 0.00 0.00 33.95 3.02
87 88 4.013728 CCATCCCGTTCATTAACCTTGAA 58.986 43.478 0.00 0.00 31.46 2.69
88 89 3.616219 CCATCCCGTTCATTAACCTTGA 58.384 45.455 0.00 0.00 31.46 3.02
89 90 2.687935 CCCATCCCGTTCATTAACCTTG 59.312 50.000 0.00 0.00 31.46 3.61
90 91 2.310647 ACCCATCCCGTTCATTAACCTT 59.689 45.455 0.00 0.00 31.46 3.50
91 92 1.920351 ACCCATCCCGTTCATTAACCT 59.080 47.619 0.00 0.00 31.46 3.50
92 93 2.430248 ACCCATCCCGTTCATTAACC 57.570 50.000 0.00 0.00 31.46 2.85
93 94 6.150474 CCATATTACCCATCCCGTTCATTAAC 59.850 42.308 0.00 0.00 0.00 2.01
94 95 6.242396 CCATATTACCCATCCCGTTCATTAA 58.758 40.000 0.00 0.00 0.00 1.40
95 96 5.805098 GCCATATTACCCATCCCGTTCATTA 60.805 44.000 0.00 0.00 0.00 1.90
96 97 4.662278 CCATATTACCCATCCCGTTCATT 58.338 43.478 0.00 0.00 0.00 2.57
97 98 3.561313 GCCATATTACCCATCCCGTTCAT 60.561 47.826 0.00 0.00 0.00 2.57
98 99 2.224670 GCCATATTACCCATCCCGTTCA 60.225 50.000 0.00 0.00 0.00 3.18
99 100 2.433436 GCCATATTACCCATCCCGTTC 58.567 52.381 0.00 0.00 0.00 3.95
100 101 1.271163 CGCCATATTACCCATCCCGTT 60.271 52.381 0.00 0.00 0.00 4.44
101 102 0.323629 CGCCATATTACCCATCCCGT 59.676 55.000 0.00 0.00 0.00 5.28
102 103 1.024579 GCGCCATATTACCCATCCCG 61.025 60.000 0.00 0.00 0.00 5.14
103 104 0.037590 TGCGCCATATTACCCATCCC 59.962 55.000 4.18 0.00 0.00 3.85
104 105 1.165270 GTGCGCCATATTACCCATCC 58.835 55.000 4.18 0.00 0.00 3.51
105 106 1.165270 GGTGCGCCATATTACCCATC 58.835 55.000 12.58 0.00 34.09 3.51
106 107 3.339547 GGTGCGCCATATTACCCAT 57.660 52.632 12.58 0.00 34.09 4.00
107 108 4.889807 GGTGCGCCATATTACCCA 57.110 55.556 12.58 0.00 34.09 4.51
108 109 4.074647 GGGTGCGCCATATTACCC 57.925 61.111 19.98 14.84 45.32 3.69
109 110 0.251165 ATGGGGTGCGCCATATTACC 60.251 55.000 19.98 9.41 36.17 2.85
110 111 2.081462 GTATGGGGTGCGCCATATTAC 58.919 52.381 24.31 14.60 36.17 1.89
111 112 1.338294 CGTATGGGGTGCGCCATATTA 60.338 52.381 24.31 7.88 36.17 0.98
112 113 0.605319 CGTATGGGGTGCGCCATATT 60.605 55.000 24.31 7.88 36.17 1.28
113 114 1.003839 CGTATGGGGTGCGCCATAT 60.004 57.895 24.31 13.73 36.17 1.78
114 115 1.114119 TACGTATGGGGTGCGCCATA 61.114 55.000 19.98 19.77 39.75 2.74
115 116 2.377628 CTACGTATGGGGTGCGCCAT 62.378 60.000 19.98 21.57 39.75 4.40
116 117 3.075641 TACGTATGGGGTGCGCCA 61.076 61.111 19.98 10.39 39.75 5.69
117 118 2.279918 CTACGTATGGGGTGCGCC 60.280 66.667 8.12 8.12 39.75 6.53
118 119 1.299926 CTCTACGTATGGGGTGCGC 60.300 63.158 0.00 0.00 39.75 6.09
119 120 0.959553 ATCTCTACGTATGGGGTGCG 59.040 55.000 0.00 0.00 42.02 5.34
120 121 1.961394 TCATCTCTACGTATGGGGTGC 59.039 52.381 0.00 0.00 0.00 5.01
121 122 3.243771 GGTTCATCTCTACGTATGGGGTG 60.244 52.174 0.00 0.00 0.00 4.61
122 123 2.963782 GGTTCATCTCTACGTATGGGGT 59.036 50.000 0.00 0.00 0.00 4.95
123 124 3.231818 AGGTTCATCTCTACGTATGGGG 58.768 50.000 0.00 0.00 0.00 4.96
124 125 4.939052 AAGGTTCATCTCTACGTATGGG 57.061 45.455 0.00 0.00 0.00 4.00
125 126 6.566187 CGAGTAAGGTTCATCTCTACGTATGG 60.566 46.154 0.00 0.00 0.00 2.74
126 127 6.202379 TCGAGTAAGGTTCATCTCTACGTATG 59.798 42.308 0.00 0.00 0.00 2.39
127 128 6.286758 TCGAGTAAGGTTCATCTCTACGTAT 58.713 40.000 0.00 0.00 0.00 3.06
128 129 5.664457 TCGAGTAAGGTTCATCTCTACGTA 58.336 41.667 0.00 0.00 0.00 3.57
129 130 4.511527 TCGAGTAAGGTTCATCTCTACGT 58.488 43.478 0.00 0.00 0.00 3.57
130 131 4.553156 GCTCGAGTAAGGTTCATCTCTACG 60.553 50.000 15.13 0.00 0.00 3.51
131 132 4.553156 CGCTCGAGTAAGGTTCATCTCTAC 60.553 50.000 15.13 0.00 0.00 2.59
132 133 3.560481 CGCTCGAGTAAGGTTCATCTCTA 59.440 47.826 15.13 0.00 0.00 2.43
133 134 2.356382 CGCTCGAGTAAGGTTCATCTCT 59.644 50.000 15.13 0.00 0.00 3.10
134 135 2.722071 CGCTCGAGTAAGGTTCATCTC 58.278 52.381 15.13 0.00 0.00 2.75
135 136 1.202313 GCGCTCGAGTAAGGTTCATCT 60.202 52.381 15.13 0.00 0.00 2.90
136 137 1.201343 GCGCTCGAGTAAGGTTCATC 58.799 55.000 15.13 0.00 0.00 2.92
137 138 0.818296 AGCGCTCGAGTAAGGTTCAT 59.182 50.000 15.13 0.00 0.00 2.57
138 139 0.170561 GAGCGCTCGAGTAAGGTTCA 59.829 55.000 23.61 0.00 0.00 3.18
139 140 2.946703 GAGCGCTCGAGTAAGGTTC 58.053 57.895 23.61 5.30 0.00 3.62
150 151 1.518792 GTTTAGGGGACGAGCGCTC 60.519 63.158 27.64 27.64 0.00 5.03
151 152 2.577593 GTTTAGGGGACGAGCGCT 59.422 61.111 11.27 11.27 0.00 5.92
152 153 2.510918 GGTTTAGGGGACGAGCGC 60.511 66.667 0.00 0.00 0.00 5.92
153 154 1.017701 GTTGGTTTAGGGGACGAGCG 61.018 60.000 0.00 0.00 0.00 5.03
154 155 0.035739 TGTTGGTTTAGGGGACGAGC 59.964 55.000 0.00 0.00 0.00 5.03
155 156 2.747446 CAATGTTGGTTTAGGGGACGAG 59.253 50.000 0.00 0.00 0.00 4.18
156 157 2.553466 CCAATGTTGGTTTAGGGGACGA 60.553 50.000 3.58 0.00 43.43 4.20
157 158 1.816224 CCAATGTTGGTTTAGGGGACG 59.184 52.381 3.58 0.00 43.43 4.79
168 169 3.993609 TGCCTCCGCTACCAATGTTGG 62.994 57.143 10.16 10.16 44.56 3.77
169 170 0.676466 TGCCTCCGCTACCAATGTTG 60.676 55.000 0.00 0.00 35.36 3.33
170 171 0.037590 TTGCCTCCGCTACCAATGTT 59.962 50.000 0.00 0.00 35.36 2.71
171 172 0.676782 GTTGCCTCCGCTACCAATGT 60.677 55.000 0.00 0.00 35.05 2.71
172 173 0.676466 TGTTGCCTCCGCTACCAATG 60.676 55.000 0.00 0.00 39.64 2.82
173 174 0.037590 TTGTTGCCTCCGCTACCAAT 59.962 50.000 0.00 0.00 39.64 3.16
174 175 0.037590 ATTGTTGCCTCCGCTACCAA 59.962 50.000 0.00 0.00 39.64 3.67
175 176 0.676466 CATTGTTGCCTCCGCTACCA 60.676 55.000 0.00 0.00 39.64 3.25
176 177 1.376609 CCATTGTTGCCTCCGCTACC 61.377 60.000 0.00 0.00 39.64 3.18
177 178 0.392461 TCCATTGTTGCCTCCGCTAC 60.392 55.000 0.00 0.00 40.62 3.58
178 179 0.546122 ATCCATTGTTGCCTCCGCTA 59.454 50.000 0.00 0.00 35.36 4.26
179 180 1.033746 CATCCATTGTTGCCTCCGCT 61.034 55.000 0.00 0.00 35.36 5.52
180 181 1.434696 CATCCATTGTTGCCTCCGC 59.565 57.895 0.00 0.00 0.00 5.54
181 182 1.314534 TGCATCCATTGTTGCCTCCG 61.315 55.000 6.42 0.00 36.55 4.63
182 183 0.896923 TTGCATCCATTGTTGCCTCC 59.103 50.000 0.00 0.00 36.55 4.30
183 184 2.747396 TTTGCATCCATTGTTGCCTC 57.253 45.000 0.00 0.00 36.55 4.70
184 185 3.488778 TTTTTGCATCCATTGTTGCCT 57.511 38.095 0.00 0.00 36.55 4.75
201 202 4.038282 CCTTTTACCGCCACTAACCTTTTT 59.962 41.667 0.00 0.00 0.00 1.94
202 203 3.570975 CCTTTTACCGCCACTAACCTTTT 59.429 43.478 0.00 0.00 0.00 2.27
203 204 3.151554 CCTTTTACCGCCACTAACCTTT 58.848 45.455 0.00 0.00 0.00 3.11
204 205 2.372837 TCCTTTTACCGCCACTAACCTT 59.627 45.455 0.00 0.00 0.00 3.50
205 206 1.980036 TCCTTTTACCGCCACTAACCT 59.020 47.619 0.00 0.00 0.00 3.50
206 207 2.477845 TCCTTTTACCGCCACTAACC 57.522 50.000 0.00 0.00 0.00 2.85
207 208 3.602483 TCATCCTTTTACCGCCACTAAC 58.398 45.455 0.00 0.00 0.00 2.34
208 209 3.370103 CCTCATCCTTTTACCGCCACTAA 60.370 47.826 0.00 0.00 0.00 2.24
209 210 2.169769 CCTCATCCTTTTACCGCCACTA 59.830 50.000 0.00 0.00 0.00 2.74
210 211 1.065418 CCTCATCCTTTTACCGCCACT 60.065 52.381 0.00 0.00 0.00 4.00
211 212 1.379527 CCTCATCCTTTTACCGCCAC 58.620 55.000 0.00 0.00 0.00 5.01
212 213 0.254747 CCCTCATCCTTTTACCGCCA 59.745 55.000 0.00 0.00 0.00 5.69
213 214 0.255033 ACCCTCATCCTTTTACCGCC 59.745 55.000 0.00 0.00 0.00 6.13
214 215 1.065709 TCACCCTCATCCTTTTACCGC 60.066 52.381 0.00 0.00 0.00 5.68
215 216 3.055385 TCTTCACCCTCATCCTTTTACCG 60.055 47.826 0.00 0.00 0.00 4.02
216 217 4.569719 TCTTCACCCTCATCCTTTTACC 57.430 45.455 0.00 0.00 0.00 2.85
217 218 5.412904 CAGTTCTTCACCCTCATCCTTTTAC 59.587 44.000 0.00 0.00 0.00 2.01
218 219 5.309543 TCAGTTCTTCACCCTCATCCTTTTA 59.690 40.000 0.00 0.00 0.00 1.52
219 220 4.104738 TCAGTTCTTCACCCTCATCCTTTT 59.895 41.667 0.00 0.00 0.00 2.27
220 221 3.652869 TCAGTTCTTCACCCTCATCCTTT 59.347 43.478 0.00 0.00 0.00 3.11
221 222 3.251484 TCAGTTCTTCACCCTCATCCTT 58.749 45.455 0.00 0.00 0.00 3.36
222 223 2.907892 TCAGTTCTTCACCCTCATCCT 58.092 47.619 0.00 0.00 0.00 3.24
223 224 3.261897 TCTTCAGTTCTTCACCCTCATCC 59.738 47.826 0.00 0.00 0.00 3.51
224 225 4.543590 TCTTCAGTTCTTCACCCTCATC 57.456 45.455 0.00 0.00 0.00 2.92
225 226 4.594920 TCTTCTTCAGTTCTTCACCCTCAT 59.405 41.667 0.00 0.00 0.00 2.90
226 227 3.967326 TCTTCTTCAGTTCTTCACCCTCA 59.033 43.478 0.00 0.00 0.00 3.86
227 228 4.562552 CCTCTTCTTCAGTTCTTCACCCTC 60.563 50.000 0.00 0.00 0.00 4.30
228 229 3.326297 CCTCTTCTTCAGTTCTTCACCCT 59.674 47.826 0.00 0.00 0.00 4.34
229 230 3.325135 TCCTCTTCTTCAGTTCTTCACCC 59.675 47.826 0.00 0.00 0.00 4.61
230 231 4.311606 GTCCTCTTCTTCAGTTCTTCACC 58.688 47.826 0.00 0.00 0.00 4.02
231 232 3.984633 CGTCCTCTTCTTCAGTTCTTCAC 59.015 47.826 0.00 0.00 0.00 3.18
232 233 3.005897 CCGTCCTCTTCTTCAGTTCTTCA 59.994 47.826 0.00 0.00 0.00 3.02
233 234 3.256136 TCCGTCCTCTTCTTCAGTTCTTC 59.744 47.826 0.00 0.00 0.00 2.87
234 235 3.231818 TCCGTCCTCTTCTTCAGTTCTT 58.768 45.455 0.00 0.00 0.00 2.52
235 236 2.823154 CTCCGTCCTCTTCTTCAGTTCT 59.177 50.000 0.00 0.00 0.00 3.01
236 237 2.820787 TCTCCGTCCTCTTCTTCAGTTC 59.179 50.000 0.00 0.00 0.00 3.01
237 238 2.877866 TCTCCGTCCTCTTCTTCAGTT 58.122 47.619 0.00 0.00 0.00 3.16
238 239 2.588464 TCTCCGTCCTCTTCTTCAGT 57.412 50.000 0.00 0.00 0.00 3.41
239 240 2.100584 CCATCTCCGTCCTCTTCTTCAG 59.899 54.545 0.00 0.00 0.00 3.02
240 241 2.103373 CCATCTCCGTCCTCTTCTTCA 58.897 52.381 0.00 0.00 0.00 3.02
241 242 1.410882 CCCATCTCCGTCCTCTTCTTC 59.589 57.143 0.00 0.00 0.00 2.87
242 243 1.490574 CCCATCTCCGTCCTCTTCTT 58.509 55.000 0.00 0.00 0.00 2.52
243 244 0.397816 CCCCATCTCCGTCCTCTTCT 60.398 60.000 0.00 0.00 0.00 2.85
244 245 1.403687 CCCCCATCTCCGTCCTCTTC 61.404 65.000 0.00 0.00 0.00 2.87
245 246 1.383248 CCCCCATCTCCGTCCTCTT 60.383 63.158 0.00 0.00 0.00 2.85
246 247 1.669927 ATCCCCCATCTCCGTCCTCT 61.670 60.000 0.00 0.00 0.00 3.69
247 248 1.152226 ATCCCCCATCTCCGTCCTC 60.152 63.158 0.00 0.00 0.00 3.71
248 249 1.460305 CATCCCCCATCTCCGTCCT 60.460 63.158 0.00 0.00 0.00 3.85
249 250 2.520536 CCATCCCCCATCTCCGTCC 61.521 68.421 0.00 0.00 0.00 4.79
250 251 2.520536 CCCATCCCCCATCTCCGTC 61.521 68.421 0.00 0.00 0.00 4.79
251 252 2.448542 CCCATCCCCCATCTCCGT 60.449 66.667 0.00 0.00 0.00 4.69
252 253 3.252284 CCCCATCCCCCATCTCCG 61.252 72.222 0.00 0.00 0.00 4.63
253 254 2.860971 CCCCCATCCCCCATCTCC 60.861 72.222 0.00 0.00 0.00 3.71
254 255 1.849823 CTCCCCCATCCCCCATCTC 60.850 68.421 0.00 0.00 0.00 2.75
255 256 2.295365 CTCCCCCATCCCCCATCT 59.705 66.667 0.00 0.00 0.00 2.90
256 257 2.860971 CCTCCCCCATCCCCCATC 60.861 72.222 0.00 0.00 0.00 3.51
257 258 2.538477 TTTCCTCCCCCATCCCCCAT 62.538 60.000 0.00 0.00 0.00 4.00
258 259 3.230202 TTTCCTCCCCCATCCCCCA 62.230 63.158 0.00 0.00 0.00 4.96
259 260 2.287661 TTTCCTCCCCCATCCCCC 60.288 66.667 0.00 0.00 0.00 5.40
260 261 1.308746 TCTTTCCTCCCCCATCCCC 60.309 63.158 0.00 0.00 0.00 4.81
261 262 2.000825 GCTCTTTCCTCCCCCATCCC 62.001 65.000 0.00 0.00 0.00 3.85
262 263 0.990818 AGCTCTTTCCTCCCCCATCC 60.991 60.000 0.00 0.00 0.00 3.51
263 264 1.807814 TAGCTCTTTCCTCCCCCATC 58.192 55.000 0.00 0.00 0.00 3.51
264 265 2.286935 TTAGCTCTTTCCTCCCCCAT 57.713 50.000 0.00 0.00 0.00 4.00
265 266 2.053747 TTTAGCTCTTTCCTCCCCCA 57.946 50.000 0.00 0.00 0.00 4.96
266 267 2.242452 ACATTTAGCTCTTTCCTCCCCC 59.758 50.000 0.00 0.00 0.00 5.40
267 268 3.282885 CACATTTAGCTCTTTCCTCCCC 58.717 50.000 0.00 0.00 0.00 4.81
268 269 3.942115 GACACATTTAGCTCTTTCCTCCC 59.058 47.826 0.00 0.00 0.00 4.30
269 270 3.619038 CGACACATTTAGCTCTTTCCTCC 59.381 47.826 0.00 0.00 0.00 4.30
270 271 4.495422 TCGACACATTTAGCTCTTTCCTC 58.505 43.478 0.00 0.00 0.00 3.71
271 272 4.021016 ACTCGACACATTTAGCTCTTTCCT 60.021 41.667 0.00 0.00 0.00 3.36
272 273 4.092091 CACTCGACACATTTAGCTCTTTCC 59.908 45.833 0.00 0.00 0.00 3.13
273 274 4.434857 GCACTCGACACATTTAGCTCTTTC 60.435 45.833 0.00 0.00 0.00 2.62
274 275 3.433615 GCACTCGACACATTTAGCTCTTT 59.566 43.478 0.00 0.00 0.00 2.52
275 276 2.996621 GCACTCGACACATTTAGCTCTT 59.003 45.455 0.00 0.00 0.00 2.85
276 277 2.029020 TGCACTCGACACATTTAGCTCT 60.029 45.455 0.00 0.00 0.00 4.09
277 278 2.337583 TGCACTCGACACATTTAGCTC 58.662 47.619 0.00 0.00 0.00 4.09
278 279 2.455674 TGCACTCGACACATTTAGCT 57.544 45.000 0.00 0.00 0.00 3.32
279 280 3.186409 TCTTTGCACTCGACACATTTAGC 59.814 43.478 0.00 0.00 0.00 3.09
280 281 4.449068 AGTCTTTGCACTCGACACATTTAG 59.551 41.667 10.67 0.00 0.00 1.85
281 282 4.377021 AGTCTTTGCACTCGACACATTTA 58.623 39.130 10.67 0.00 0.00 1.40
282 283 3.206150 AGTCTTTGCACTCGACACATTT 58.794 40.909 10.67 0.00 0.00 2.32
283 284 2.838736 AGTCTTTGCACTCGACACATT 58.161 42.857 10.67 0.00 0.00 2.71
284 285 2.533266 AGTCTTTGCACTCGACACAT 57.467 45.000 10.67 0.00 0.00 3.21
285 286 2.621526 TCTAGTCTTTGCACTCGACACA 59.378 45.455 10.67 0.02 0.00 3.72
286 287 3.284323 TCTAGTCTTTGCACTCGACAC 57.716 47.619 10.67 0.00 0.00 3.67
287 288 3.305403 CCTTCTAGTCTTTGCACTCGACA 60.305 47.826 10.67 0.00 0.00 4.35
288 289 3.057456 TCCTTCTAGTCTTTGCACTCGAC 60.057 47.826 0.00 0.00 0.00 4.20
289 290 3.154710 TCCTTCTAGTCTTTGCACTCGA 58.845 45.455 0.00 0.00 0.00 4.04
290 291 3.506810 CTCCTTCTAGTCTTTGCACTCG 58.493 50.000 0.00 0.00 0.00 4.18
291 292 3.855858 CCTCCTTCTAGTCTTTGCACTC 58.144 50.000 0.00 0.00 0.00 3.51
292 293 2.027653 GCCTCCTTCTAGTCTTTGCACT 60.028 50.000 0.00 0.00 0.00 4.40
293 294 2.289694 TGCCTCCTTCTAGTCTTTGCAC 60.290 50.000 0.00 0.00 0.00 4.57
294 295 1.977854 TGCCTCCTTCTAGTCTTTGCA 59.022 47.619 0.00 0.00 0.00 4.08
295 296 2.234908 TCTGCCTCCTTCTAGTCTTTGC 59.765 50.000 0.00 0.00 0.00 3.68
296 297 4.751767 ATCTGCCTCCTTCTAGTCTTTG 57.248 45.455 0.00 0.00 0.00 2.77
297 298 7.444703 AATAATCTGCCTCCTTCTAGTCTTT 57.555 36.000 0.00 0.00 0.00 2.52
298 299 7.092668 ACAAATAATCTGCCTCCTTCTAGTCTT 60.093 37.037 0.00 0.00 0.00 3.01
299 300 6.385467 ACAAATAATCTGCCTCCTTCTAGTCT 59.615 38.462 0.00 0.00 0.00 3.24
300 301 6.481644 CACAAATAATCTGCCTCCTTCTAGTC 59.518 42.308 0.00 0.00 0.00 2.59
301 302 6.352516 CACAAATAATCTGCCTCCTTCTAGT 58.647 40.000 0.00 0.00 0.00 2.57
302 303 5.238214 GCACAAATAATCTGCCTCCTTCTAG 59.762 44.000 0.00 0.00 0.00 2.43
303 304 5.126067 GCACAAATAATCTGCCTCCTTCTA 58.874 41.667 0.00 0.00 0.00 2.10
304 305 3.950395 GCACAAATAATCTGCCTCCTTCT 59.050 43.478 0.00 0.00 0.00 2.85
305 306 3.696051 TGCACAAATAATCTGCCTCCTTC 59.304 43.478 0.00 0.00 0.00 3.46
306 307 3.700538 TGCACAAATAATCTGCCTCCTT 58.299 40.909 0.00 0.00 0.00 3.36
307 308 3.370840 TGCACAAATAATCTGCCTCCT 57.629 42.857 0.00 0.00 0.00 3.69
308 309 3.193267 TGTTGCACAAATAATCTGCCTCC 59.807 43.478 0.00 0.00 0.00 4.30
309 310 4.439305 TGTTGCACAAATAATCTGCCTC 57.561 40.909 0.00 0.00 0.00 4.70
310 311 4.870123 TTGTTGCACAAATAATCTGCCT 57.130 36.364 0.00 0.00 34.76 4.75
311 312 6.332630 ACTATTGTTGCACAAATAATCTGCC 58.667 36.000 5.94 0.00 41.96 4.85
312 313 7.669098 CAACTATTGTTGCACAAATAATCTGC 58.331 34.615 7.09 0.00 45.57 4.26
334 335 8.807581 GCTAAGTGTCATTTTTAATATGCCAAC 58.192 33.333 0.00 0.00 0.00 3.77
335 336 8.526978 TGCTAAGTGTCATTTTTAATATGCCAA 58.473 29.630 0.00 0.00 0.00 4.52
336 337 8.060931 TGCTAAGTGTCATTTTTAATATGCCA 57.939 30.769 0.00 0.00 0.00 4.92
337 338 8.190784 ACTGCTAAGTGTCATTTTTAATATGCC 58.809 33.333 0.00 0.00 34.48 4.40
338 339 9.226345 GACTGCTAAGTGTCATTTTTAATATGC 57.774 33.333 0.00 0.00 36.52 3.14
350 351 9.448438 AAAATACAATATGACTGCTAAGTGTCA 57.552 29.630 0.00 0.00 45.56 3.58
353 354 9.507280 CCAAAAATACAATATGACTGCTAAGTG 57.493 33.333 0.00 0.00 36.52 3.16
354 355 9.243105 ACCAAAAATACAATATGACTGCTAAGT 57.757 29.630 0.00 0.00 40.21 2.24
357 358 9.853555 CAAACCAAAAATACAATATGACTGCTA 57.146 29.630 0.00 0.00 0.00 3.49
358 359 7.331687 GCAAACCAAAAATACAATATGACTGCT 59.668 33.333 0.00 0.00 0.00 4.24
359 360 7.117523 TGCAAACCAAAAATACAATATGACTGC 59.882 33.333 0.00 0.00 0.00 4.40
360 361 8.531622 TGCAAACCAAAAATACAATATGACTG 57.468 30.769 0.00 0.00 0.00 3.51
361 362 9.723601 AATGCAAACCAAAAATACAATATGACT 57.276 25.926 0.00 0.00 0.00 3.41
368 369 9.823647 TCTAAGAAATGCAAACCAAAAATACAA 57.176 25.926 0.00 0.00 0.00 2.41
369 370 9.255304 GTCTAAGAAATGCAAACCAAAAATACA 57.745 29.630 0.00 0.00 0.00 2.29
370 371 9.255304 TGTCTAAGAAATGCAAACCAAAAATAC 57.745 29.630 0.00 0.00 0.00 1.89
371 372 9.823647 TTGTCTAAGAAATGCAAACCAAAAATA 57.176 25.926 0.00 0.00 0.00 1.40
372 373 8.729805 TTGTCTAAGAAATGCAAACCAAAAAT 57.270 26.923 0.00 0.00 0.00 1.82
373 374 7.821846 ACTTGTCTAAGAAATGCAAACCAAAAA 59.178 29.630 0.00 0.00 37.36 1.94
374 375 7.327214 ACTTGTCTAAGAAATGCAAACCAAAA 58.673 30.769 0.00 0.00 37.36 2.44
375 376 6.872920 ACTTGTCTAAGAAATGCAAACCAAA 58.127 32.000 0.00 0.00 37.36 3.28
376 377 6.463995 ACTTGTCTAAGAAATGCAAACCAA 57.536 33.333 0.00 0.00 37.36 3.67
377 378 6.206634 CCTACTTGTCTAAGAAATGCAAACCA 59.793 38.462 0.00 0.00 37.36 3.67
378 379 6.430000 TCCTACTTGTCTAAGAAATGCAAACC 59.570 38.462 0.00 0.00 37.36 3.27
379 380 7.435068 TCCTACTTGTCTAAGAAATGCAAAC 57.565 36.000 0.00 0.00 37.36 2.93
380 381 8.458573 TTTCCTACTTGTCTAAGAAATGCAAA 57.541 30.769 0.00 0.00 37.36 3.68
381 382 8.635765 ATTTCCTACTTGTCTAAGAAATGCAA 57.364 30.769 0.00 0.00 37.36 4.08
382 383 9.383519 CTATTTCCTACTTGTCTAAGAAATGCA 57.616 33.333 0.00 0.00 37.36 3.96
383 384 9.601217 TCTATTTCCTACTTGTCTAAGAAATGC 57.399 33.333 0.00 0.00 37.36 3.56
392 393 9.756571 TCTAGAACTTCTATTTCCTACTTGTCT 57.243 33.333 0.00 0.00 0.00 3.41
393 394 9.791820 GTCTAGAACTTCTATTTCCTACTTGTC 57.208 37.037 0.00 0.00 0.00 3.18
394 395 8.751242 GGTCTAGAACTTCTATTTCCTACTTGT 58.249 37.037 0.00 0.00 0.00 3.16
395 396 8.973182 AGGTCTAGAACTTCTATTTCCTACTTG 58.027 37.037 3.84 0.00 28.80 3.16
396 397 9.549984 AAGGTCTAGAACTTCTATTTCCTACTT 57.450 33.333 17.60 0.00 31.60 2.24
397 398 9.549984 AAAGGTCTAGAACTTCTATTTCCTACT 57.450 33.333 23.10 0.31 37.36 2.57
400 401 8.661345 ACAAAAGGTCTAGAACTTCTATTTCCT 58.339 33.333 23.10 4.48 37.36 3.36
401 402 8.850007 ACAAAAGGTCTAGAACTTCTATTTCC 57.150 34.615 23.10 2.03 37.36 3.13
407 408 8.019656 TGAGTTACAAAAGGTCTAGAACTTCT 57.980 34.615 23.10 14.31 37.36 2.85
429 430 8.137437 ACATGGTCAAAATTAGAAGTGTTTGAG 58.863 33.333 0.00 0.00 39.84 3.02
587 597 6.157904 AGGACTTCTCTAAGTAAAACTTCGC 58.842 40.000 0.00 0.00 46.09 4.70
588 598 9.688592 TTTAGGACTTCTCTAAGTAAAACTTCG 57.311 33.333 0.00 0.00 46.09 3.79
635 645 6.070366 ACTCGGCTTATTAAAAGTACTCCCTT 60.070 38.462 0.00 0.00 0.00 3.95
646 656 9.321562 CCACTATTTCTTACTCGGCTTATTAAA 57.678 33.333 0.00 0.00 0.00 1.52
647 657 7.440255 GCCACTATTTCTTACTCGGCTTATTAA 59.560 37.037 0.00 0.00 35.39 1.40
648 658 6.927381 GCCACTATTTCTTACTCGGCTTATTA 59.073 38.462 0.00 0.00 35.39 0.98
649 659 5.758784 GCCACTATTTCTTACTCGGCTTATT 59.241 40.000 0.00 0.00 35.39 1.40
650 660 5.298347 GCCACTATTTCTTACTCGGCTTAT 58.702 41.667 0.00 0.00 35.39 1.73
651 661 4.442472 GGCCACTATTTCTTACTCGGCTTA 60.442 45.833 0.00 0.00 38.37 3.09
695 707 2.611518 GTGTAGCATCGTGAGCTTTCT 58.388 47.619 4.55 0.00 43.25 2.52
723 735 2.531522 TGACAGCATATCACCATCCG 57.468 50.000 0.00 0.00 0.00 4.18
812 863 3.972328 AAGGAAGGGAGGGAGGGGC 62.972 68.421 0.00 0.00 0.00 5.80
813 864 1.694525 GAAGGAAGGGAGGGAGGGG 60.695 68.421 0.00 0.00 0.00 4.79
814 865 1.694525 GGAAGGAAGGGAGGGAGGG 60.695 68.421 0.00 0.00 0.00 4.30
815 866 0.253394 AAGGAAGGAAGGGAGGGAGG 60.253 60.000 0.00 0.00 0.00 4.30
816 867 1.208706 GAAGGAAGGAAGGGAGGGAG 58.791 60.000 0.00 0.00 0.00 4.30
817 868 0.253207 GGAAGGAAGGAAGGGAGGGA 60.253 60.000 0.00 0.00 0.00 4.20
818 869 0.253394 AGGAAGGAAGGAAGGGAGGG 60.253 60.000 0.00 0.00 0.00 4.30
819 870 2.120312 GTAGGAAGGAAGGAAGGGAGG 58.880 57.143 0.00 0.00 0.00 4.30
820 871 2.769095 CAGTAGGAAGGAAGGAAGGGAG 59.231 54.545 0.00 0.00 0.00 4.30
821 872 2.113777 ACAGTAGGAAGGAAGGAAGGGA 59.886 50.000 0.00 0.00 0.00 4.20
899 955 0.041090 AGTGCTGGGGTTTTATGGGG 59.959 55.000 0.00 0.00 0.00 4.96
900 956 1.272425 TGAGTGCTGGGGTTTTATGGG 60.272 52.381 0.00 0.00 0.00 4.00
901 957 1.818674 GTGAGTGCTGGGGTTTTATGG 59.181 52.381 0.00 0.00 0.00 2.74
902 958 2.228822 GTGTGAGTGCTGGGGTTTTATG 59.771 50.000 0.00 0.00 0.00 1.90
903 959 2.514803 GTGTGAGTGCTGGGGTTTTAT 58.485 47.619 0.00 0.00 0.00 1.40
904 960 1.477923 GGTGTGAGTGCTGGGGTTTTA 60.478 52.381 0.00 0.00 0.00 1.52
957 1022 4.906537 GGTTGGGGTTGTGGCGGT 62.907 66.667 0.00 0.00 0.00 5.68
1505 1896 1.141645 TACACACATTTCGGACACGC 58.858 50.000 0.00 0.00 40.69 5.34
1524 1915 2.325761 GCGCGAACGAACCAGATATAT 58.674 47.619 12.10 0.00 43.93 0.86
1581 1972 0.391661 CTACACGCAACTCTGGCCAT 60.392 55.000 5.51 0.00 0.00 4.40
1585 1976 0.670546 CCCACTACACGCAACTCTGG 60.671 60.000 0.00 0.00 0.00 3.86
1586 1977 0.670546 CCCCACTACACGCAACTCTG 60.671 60.000 0.00 0.00 0.00 3.35
1587 1978 0.830444 TCCCCACTACACGCAACTCT 60.830 55.000 0.00 0.00 0.00 3.24
1719 2110 4.334759 CAGATAATGGACTTGCCTTCACAG 59.665 45.833 0.00 0.00 37.63 3.66
1723 2114 4.034510 CGAACAGATAATGGACTTGCCTTC 59.965 45.833 0.00 0.00 37.63 3.46
1733 2124 3.062639 GTGCAGTCACGAACAGATAATGG 59.937 47.826 0.00 0.00 32.98 3.16
1740 2135 2.138320 AGATTGTGCAGTCACGAACAG 58.862 47.619 0.00 0.00 46.01 3.16
1764 2159 4.035675 GGGCTTTCTACATAAGTGCATCAC 59.964 45.833 0.00 0.00 34.10 3.06
1765 2160 4.199310 GGGCTTTCTACATAAGTGCATCA 58.801 43.478 0.00 0.00 0.00 3.07
1766 2161 3.248602 CGGGCTTTCTACATAAGTGCATC 59.751 47.826 0.00 0.00 0.00 3.91
1770 2186 3.248602 GCATCGGGCTTTCTACATAAGTG 59.751 47.826 0.00 0.00 40.25 3.16
1787 2206 2.514013 GGTACTCAACGCGGCATCG 61.514 63.158 12.47 0.00 39.81 3.84
1791 2210 2.048503 ACTGGTACTCAACGCGGC 60.049 61.111 12.47 0.00 0.00 6.53
1795 2214 2.030185 AGTACTGCACTGGTACTCAACG 60.030 50.000 10.58 0.00 44.21 4.10
1805 2224 5.574830 GTCTGAACTATCAAGTACTGCACTG 59.425 44.000 0.00 0.00 37.63 3.66
1865 2289 4.631131 TCTGTGACTGTGAACAACCATAG 58.369 43.478 0.00 0.00 0.00 2.23
1884 2308 1.616865 TCAACGGACTAACACCCTCTG 59.383 52.381 0.00 0.00 0.00 3.35
1896 2320 2.083774 TCTTTGCCATCATCAACGGAC 58.916 47.619 0.00 0.00 0.00 4.79
1898 2322 2.797087 GCATCTTTGCCATCATCAACGG 60.797 50.000 0.00 0.00 43.38 4.44
2065 2489 7.340232 ACTTTCTACATAAGTACATGACCCGTA 59.660 37.037 0.00 0.00 34.22 4.02
2066 2490 6.154021 ACTTTCTACATAAGTACATGACCCGT 59.846 38.462 0.00 0.00 34.22 5.28
2067 2491 6.570692 ACTTTCTACATAAGTACATGACCCG 58.429 40.000 0.00 0.00 34.22 5.28
2068 2492 7.707035 CAGACTTTCTACATAAGTACATGACCC 59.293 40.741 0.00 0.00 36.04 4.46
2069 2493 8.467598 TCAGACTTTCTACATAAGTACATGACC 58.532 37.037 0.00 0.00 36.04 4.02
2086 2513 1.896220 TGGCATGGTGTCAGACTTTC 58.104 50.000 1.31 0.00 0.00 2.62
2178 2768 1.746517 ACCCTCTGTGACGGTGAAC 59.253 57.895 0.00 0.00 0.00 3.18
2229 2845 0.673333 TGTGGCTGAACCTACATGCG 60.673 55.000 0.00 0.00 40.22 4.73
2236 2853 1.556911 CAGTCCTATGTGGCTGAACCT 59.443 52.381 0.00 0.00 40.20 3.50
2244 2861 2.037772 GCCATCTACCAGTCCTATGTGG 59.962 54.545 0.00 0.00 39.98 4.17
2313 2930 2.141517 GCATAGAGAGCATTGCACGAT 58.858 47.619 11.91 1.64 35.22 3.73
2315 2932 1.260825 CAGCATAGAGAGCATTGCACG 59.739 52.381 11.91 0.00 37.56 5.34
2375 2992 7.360113 TCAAGCACATAGTATACTTGATCCA 57.640 36.000 11.40 0.00 41.20 3.41
2405 3022 0.969149 TGGGCTATGGCTGATAGACG 59.031 55.000 0.00 0.00 43.12 4.18
2416 3033 5.766670 ACAATGTCATGTCTTATGGGCTATG 59.233 40.000 0.00 0.00 0.00 2.23
2417 3034 5.945310 ACAATGTCATGTCTTATGGGCTAT 58.055 37.500 0.00 0.00 0.00 2.97
2418 3035 5.372343 ACAATGTCATGTCTTATGGGCTA 57.628 39.130 0.00 0.00 0.00 3.93
2419 3036 4.240881 ACAATGTCATGTCTTATGGGCT 57.759 40.909 0.00 0.00 0.00 5.19
2420 3037 6.449635 TTTACAATGTCATGTCTTATGGGC 57.550 37.500 0.00 0.00 34.75 5.36
2421 3038 8.347771 CAGATTTACAATGTCATGTCTTATGGG 58.652 37.037 0.00 0.00 34.75 4.00
2422 3039 8.347771 CCAGATTTACAATGTCATGTCTTATGG 58.652 37.037 0.00 0.00 34.75 2.74
2434 3051 4.042809 TCCCAGTGTCCAGATTTACAATGT 59.957 41.667 0.00 0.00 39.40 2.71
2509 3132 7.167635 CACAACGATCTAGTGGTGTCAATATAC 59.832 40.741 0.00 0.00 40.31 1.47
2540 3178 8.938906 GTTTGCTCATTCCACATTTTGAATAAT 58.061 29.630 0.00 0.00 30.31 1.28
2603 3242 6.035220 TCGCTGGTAATCTACAATTACAAACG 59.965 38.462 9.43 6.16 36.49 3.60
2719 3359 2.418368 TACTCCATGCCATCACCAAC 57.582 50.000 0.00 0.00 0.00 3.77
2847 3626 5.997746 AGCACTACATGTTTTGTCACTACAT 59.002 36.000 2.30 0.00 39.87 2.29
2848 3627 5.364778 AGCACTACATGTTTTGTCACTACA 58.635 37.500 2.30 0.00 39.87 2.74
2849 3628 5.924475 AGCACTACATGTTTTGTCACTAC 57.076 39.130 2.30 0.00 39.87 2.73
2850 3629 6.935741 AAAGCACTACATGTTTTGTCACTA 57.064 33.333 2.30 0.00 39.95 2.74
2851 3630 5.835113 AAAGCACTACATGTTTTGTCACT 57.165 34.783 2.30 0.00 39.95 3.41
2852 3631 5.231991 CCAAAAGCACTACATGTTTTGTCAC 59.768 40.000 2.30 0.00 40.50 3.67
2853 3632 5.105554 ACCAAAAGCACTACATGTTTTGTCA 60.106 36.000 2.30 0.00 40.50 3.58
2854 3633 5.231991 CACCAAAAGCACTACATGTTTTGTC 59.768 40.000 2.30 0.00 40.50 3.18
2855 3634 5.105554 TCACCAAAAGCACTACATGTTTTGT 60.106 36.000 2.30 0.00 40.50 2.83
2856 3635 5.347342 TCACCAAAAGCACTACATGTTTTG 58.653 37.500 2.30 7.55 40.50 2.44
2857 3636 5.590530 TCACCAAAAGCACTACATGTTTT 57.409 34.783 2.30 0.00 42.93 2.43
2860 3639 4.836125 CTTCACCAAAAGCACTACATGT 57.164 40.909 2.69 2.69 0.00 3.21
2879 3658 3.437795 GCATGACGGCTGCAGCTT 61.438 61.111 35.82 24.08 41.70 3.74
2925 3705 7.065443 CACATGAGAACATTGTGACAGTGATAT 59.935 37.037 15.20 0.00 37.53 1.63
2927 3707 5.180680 CACATGAGAACATTGTGACAGTGAT 59.819 40.000 15.20 2.46 37.53 3.06
3063 3849 2.860136 CAAGTCACGACGCATATGACAT 59.140 45.455 15.89 4.19 44.26 3.06
3064 3850 2.258755 CAAGTCACGACGCATATGACA 58.741 47.619 15.89 0.00 44.26 3.58
3065 3851 2.028045 CACAAGTCACGACGCATATGAC 59.972 50.000 6.97 7.94 42.54 3.06
3066 3852 2.094957 TCACAAGTCACGACGCATATGA 60.095 45.455 6.97 0.00 36.20 2.15
3067 3853 2.258755 TCACAAGTCACGACGCATATG 58.741 47.619 0.00 0.00 36.20 1.78
3068 3854 2.647529 TCACAAGTCACGACGCATAT 57.352 45.000 0.00 0.00 36.20 1.78
3069 3855 2.425578 TTCACAAGTCACGACGCATA 57.574 45.000 0.00 0.00 36.20 3.14
3070 3856 1.795768 ATTCACAAGTCACGACGCAT 58.204 45.000 0.00 0.00 36.20 4.73
3102 3888 1.881973 TGAGCCATTGAGCAACTGAAC 59.118 47.619 0.00 0.00 34.23 3.18
3110 3896 3.691118 TGTTAAGTCATGAGCCATTGAGC 59.309 43.478 0.00 0.00 0.00 4.26
3118 3904 6.035435 CAGACATACACTGTTAAGTCATGAGC 59.965 42.308 0.00 0.00 38.54 4.26
3147 3933 7.279615 ACATGTTCATCGAACCCATCTAAATA 58.720 34.615 0.00 0.00 41.35 1.40
3195 3999 7.575414 TGAAAAGTTGCAAATAAGTAGGTGA 57.425 32.000 0.00 0.00 0.00 4.02
3242 4046 6.836577 AAACAAAACCAATGAATGTAACCG 57.163 33.333 0.00 0.00 0.00 4.44
3520 4324 2.814280 AGATGTTGACGACGAAAGGT 57.186 45.000 0.00 0.00 0.00 3.50
3526 4330 0.169672 ACGGGTAGATGTTGACGACG 59.830 55.000 0.00 0.00 0.00 5.12
3529 4333 3.314357 TCAGATACGGGTAGATGTTGACG 59.686 47.826 0.00 0.00 0.00 4.35
3679 4483 1.375523 CACGCCGGCTTTCCTTAGT 60.376 57.895 26.68 9.42 0.00 2.24
3937 4741 1.132881 TCCATGGGGAACTTTGGCTTT 60.133 47.619 13.02 0.00 41.32 3.51
4255 5059 0.904865 ACACGCATCCTCCCTGAGAA 60.905 55.000 0.00 0.00 0.00 2.87
4433 5240 2.041265 AATCCGGTGCTCTCCCCT 59.959 61.111 0.00 0.00 0.00 4.79
4472 5279 3.583806 CCTTGACAGACTCTTGCAGTAG 58.416 50.000 0.00 0.00 34.41 2.57
4564 5371 3.120199 CGACGTGCTGGAAATTCAGATTT 60.120 43.478 0.00 0.00 38.16 2.17
4565 5372 2.416547 CGACGTGCTGGAAATTCAGATT 59.583 45.455 0.00 0.00 36.93 2.40
4566 5373 2.002586 CGACGTGCTGGAAATTCAGAT 58.997 47.619 0.00 0.00 36.93 2.90
4576 5383 1.413767 CTTCGGAATCGACGTGCTGG 61.414 60.000 0.00 0.00 45.92 4.85
4622 5429 1.756538 CAAACACAAACCTGGAAGCCT 59.243 47.619 0.00 0.00 0.00 4.58
4646 5454 0.250901 AAACAGGCAGGTAGCTGTGG 60.251 55.000 22.21 14.19 44.79 4.17
4648 5456 1.978580 AGTAAACAGGCAGGTAGCTGT 59.021 47.619 22.21 4.86 44.79 4.40
4650 5458 1.978580 ACAGTAAACAGGCAGGTAGCT 59.021 47.619 0.00 0.00 44.79 3.32
4651 5459 2.076863 CACAGTAAACAGGCAGGTAGC 58.923 52.381 0.00 0.00 44.65 3.58
4653 5461 1.418264 TGCACAGTAAACAGGCAGGTA 59.582 47.619 0.00 0.00 0.00 3.08
4654 5462 0.182537 TGCACAGTAAACAGGCAGGT 59.817 50.000 0.00 0.00 0.00 4.00
4657 5465 2.104111 ACTACTGCACAGTAAACAGGCA 59.896 45.455 11.42 0.00 42.72 4.75
4658 5466 2.737252 GACTACTGCACAGTAAACAGGC 59.263 50.000 11.42 0.56 42.72 4.85
4670 5478 1.593787 GCTCAGGCTGACTACTGCA 59.406 57.895 14.43 0.00 41.61 4.41
4671 5479 1.153469 GGCTCAGGCTGACTACTGC 60.153 63.158 14.43 14.86 39.64 4.40
4694 5502 3.136763 CAAGCTGCTCATTCCGTATCAT 58.863 45.455 1.00 0.00 0.00 2.45
4695 5503 2.554142 CAAGCTGCTCATTCCGTATCA 58.446 47.619 1.00 0.00 0.00 2.15
4696 5504 1.262683 GCAAGCTGCTCATTCCGTATC 59.737 52.381 1.00 0.00 40.96 2.24
4697 5505 1.303309 GCAAGCTGCTCATTCCGTAT 58.697 50.000 1.00 0.00 40.96 3.06
4698 5506 2.767536 GCAAGCTGCTCATTCCGTA 58.232 52.632 1.00 0.00 40.96 4.02
4712 5520 5.412594 TGCAGGATAGTTTAAACTGAGCAAG 59.587 40.000 27.40 14.88 40.07 4.01
4716 5524 6.749118 GCAAATGCAGGATAGTTTAAACTGAG 59.251 38.462 27.40 14.42 39.34 3.35
4776 5588 3.130869 GCCATGCTGAAATACATGTTCCA 59.869 43.478 2.30 0.00 41.69 3.53
4778 5590 4.357142 CTGCCATGCTGAAATACATGTTC 58.643 43.478 2.30 0.00 41.69 3.18
4786 5598 1.895238 GTGCCTGCCATGCTGAAAT 59.105 52.632 0.00 0.00 0.00 2.17
4797 5609 4.785453 CTCCTTCCCCGTGCCTGC 62.785 72.222 0.00 0.00 0.00 4.85
4804 5616 1.821332 GCATTCTGCTCCTTCCCCG 60.821 63.158 0.00 0.00 40.96 5.73
4805 5617 1.821332 CGCATTCTGCTCCTTCCCC 60.821 63.158 0.00 0.00 42.25 4.81
4806 5618 1.078143 ACGCATTCTGCTCCTTCCC 60.078 57.895 0.00 0.00 42.25 3.97
4853 5665 1.382522 ATCACGCATTTCGCTCCATT 58.617 45.000 0.00 0.00 43.23 3.16
4889 5701 6.198687 CACGCAATTAGAACAAGAACTGAAA 58.801 36.000 0.00 0.00 0.00 2.69
4898 5759 0.871722 AGCGCACGCAATTAGAACAA 59.128 45.000 18.24 0.00 44.88 2.83
4903 5764 1.135972 ACAAAGAGCGCACGCAATTAG 60.136 47.619 18.24 6.53 44.88 1.73
4923 5784 4.601857 AGATAAAGGGAACTGAAACTGGGA 59.398 41.667 0.00 0.00 42.68 4.37
4950 5811 7.119699 CCACAAGCTAACTGATCTGAATTGTAA 59.880 37.037 6.60 0.00 0.00 2.41
4956 5817 4.623932 ACCACAAGCTAACTGATCTGAA 57.376 40.909 6.60 0.00 0.00 3.02
4958 5819 6.992063 ATAAACCACAAGCTAACTGATCTG 57.008 37.500 0.00 0.00 0.00 2.90
4959 5820 7.398024 AGAATAAACCACAAGCTAACTGATCT 58.602 34.615 0.00 0.00 0.00 2.75
4961 5822 9.515226 TTTAGAATAAACCACAAGCTAACTGAT 57.485 29.630 0.00 0.00 0.00 2.90
5004 5872 8.666821 ACTGGGTTCTACTTTAGAATAAACCTT 58.333 33.333 0.00 0.00 45.63 3.50
5005 5873 8.215954 ACTGGGTTCTACTTTAGAATAAACCT 57.784 34.615 0.00 0.00 45.63 3.50
5006 5874 8.859236 AACTGGGTTCTACTTTAGAATAAACC 57.141 34.615 0.00 0.00 45.63 3.27
5011 5879 8.329502 AGCAATAACTGGGTTCTACTTTAGAAT 58.670 33.333 0.00 0.00 45.63 2.40
5013 5881 7.253905 AGCAATAACTGGGTTCTACTTTAGA 57.746 36.000 0.00 0.00 0.00 2.10
5014 5882 7.923414 AAGCAATAACTGGGTTCTACTTTAG 57.077 36.000 0.00 0.00 0.00 1.85
5015 5883 8.700439 AAAAGCAATAACTGGGTTCTACTTTA 57.300 30.769 0.00 0.00 0.00 1.85
5019 5887 6.819397 AGAAAAGCAATAACTGGGTTCTAC 57.181 37.500 0.00 0.00 0.00 2.59
5021 5889 9.343539 GATATAGAAAAGCAATAACTGGGTTCT 57.656 33.333 0.00 0.00 0.00 3.01
5022 5890 9.343539 AGATATAGAAAAGCAATAACTGGGTTC 57.656 33.333 0.00 0.00 0.00 3.62
5023 5891 9.700831 AAGATATAGAAAAGCAATAACTGGGTT 57.299 29.630 0.00 0.00 0.00 4.11
5024 5892 9.125026 CAAGATATAGAAAAGCAATAACTGGGT 57.875 33.333 0.00 0.00 0.00 4.51
5025 5893 9.342308 TCAAGATATAGAAAAGCAATAACTGGG 57.658 33.333 0.00 0.00 0.00 4.45
5032 5900 8.562892 CGGTTCATCAAGATATAGAAAAGCAAT 58.437 33.333 0.00 0.00 0.00 3.56
5048 5916 2.435938 GGGCTCGCGGTTCATCAA 60.436 61.111 6.13 0.00 0.00 2.57
5056 5928 2.438434 ATTCCTTTGGGCTCGCGG 60.438 61.111 6.13 0.00 0.00 6.46
5066 5938 2.509964 CTGTAGGTAGGCCCATTCCTTT 59.490 50.000 0.00 0.00 37.66 3.11
5067 5939 2.127708 CTGTAGGTAGGCCCATTCCTT 58.872 52.381 0.00 0.00 37.66 3.36
5077 5953 5.356470 GGAGTACTGTACAACTGTAGGTAGG 59.644 48.000 19.27 0.00 34.03 3.18
5086 5962 7.774625 GGAGATAACTAGGAGTACTGTACAACT 59.225 40.741 19.27 17.09 0.00 3.16
5087 5963 7.774625 AGGAGATAACTAGGAGTACTGTACAAC 59.225 40.741 19.27 11.36 0.00 3.32
5090 5966 6.711645 CCAGGAGATAACTAGGAGTACTGTAC 59.288 46.154 9.93 9.93 0.00 2.90
5092 5968 5.399267 CCCAGGAGATAACTAGGAGTACTGT 60.399 48.000 0.00 0.00 0.00 3.55
5093 5969 5.074115 CCCAGGAGATAACTAGGAGTACTG 58.926 50.000 0.00 0.00 0.00 2.74
5124 6032 0.752009 TATCGACGAGCTTGAGGCCT 60.752 55.000 3.86 3.86 43.05 5.19
5132 6040 5.391523 GCTCTAATGAGATTATCGACGAGCT 60.392 44.000 3.01 0.00 42.73 4.09
5134 6042 5.328691 GGCTCTAATGAGATTATCGACGAG 58.671 45.833 3.01 0.00 42.73 4.18
5143 6051 4.096190 CCATGTGGGCTCTAATGAGATT 57.904 45.455 1.09 0.00 42.73 2.40
5237 6145 0.837691 TGCTGTCATCTGGTCCCACT 60.838 55.000 0.00 0.00 0.00 4.00
5271 6179 2.202797 CCAGAGGATGTCCACGCG 60.203 66.667 3.53 3.53 38.89 6.01
5275 6183 3.994317 TCTCATAACCAGAGGATGTCCA 58.006 45.455 1.30 0.00 38.89 4.02
5281 6189 5.418840 GGCAATTTTTCTCATAACCAGAGGA 59.581 40.000 0.00 0.00 33.92 3.71
5305 6213 6.281405 ACTACCTAACATTTATCCTTCTGCG 58.719 40.000 0.00 0.00 0.00 5.18
5314 6222 6.650807 CCATGATGCGACTACCTAACATTTAT 59.349 38.462 0.00 0.00 0.00 1.40
5316 6224 4.816385 CCATGATGCGACTACCTAACATTT 59.184 41.667 0.00 0.00 0.00 2.32
5324 6232 0.461870 TGTGCCATGATGCGACTACC 60.462 55.000 0.00 0.00 0.00 3.18
5344 6252 3.377253 TTCCCGTCTCTATGTACCAGT 57.623 47.619 0.00 0.00 0.00 4.00
5345 6253 4.145807 AGATTCCCGTCTCTATGTACCAG 58.854 47.826 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.