Multiple sequence alignment - TraesCS1D01G355900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G355900 chr1D 100.000 4437 0 0 591 5027 440404012 440408448 0.000000e+00 8194
1 TraesCS1D01G355900 chr1D 100.000 67 0 0 1 67 440403422 440403488 1.900000e-24 124
2 TraesCS1D01G355900 chr1B 96.385 2794 72 12 1513 4294 597807037 597809813 0.000000e+00 4573
3 TraesCS1D01G355900 chr1B 91.939 918 43 9 591 1508 597806102 597806988 0.000000e+00 1256
4 TraesCS1D01G355900 chr1B 89.220 436 18 11 4281 4711 597813120 597813531 7.460000e-143 518
5 TraesCS1D01G355900 chr1B 93.310 284 18 1 4745 5027 597829948 597830231 7.780000e-113 418
6 TraesCS1D01G355900 chr1A 93.488 2718 120 32 1510 4195 537540821 537538129 0.000000e+00 3986
7 TraesCS1D01G355900 chr1A 94.995 919 40 3 591 1508 537541780 537540867 0.000000e+00 1437


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G355900 chr1D 440403422 440408448 5026 False 4159.000000 8194 100.000000 1 5027 2 chr1D.!!$F1 5026
1 TraesCS1D01G355900 chr1B 597806102 597813531 7429 False 2115.666667 4573 92.514667 591 4711 3 chr1B.!!$F2 4120
2 TraesCS1D01G355900 chr1A 537538129 537541780 3651 True 2711.500000 3986 94.241500 591 4195 2 chr1A.!!$R1 3604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.822121 AAAACCCGGACAGACTTGCC 60.822 55.000 0.73 0.0 0.00 4.52 F
1080 1082 0.881118 TCTTCTTGCATTTCCGTGGC 59.119 50.000 0.00 0.0 0.00 5.01 F
1295 1297 1.135024 CCATCGGCATTTTCCTTGTGG 60.135 52.381 0.00 0.0 0.00 4.17 F
1891 1937 2.301870 TCTGCACTATTTGTCGGGACTT 59.698 45.455 0.00 0.0 0.00 3.01 F
3552 3619 1.200020 CTTTCCAAGGGAATCACACGC 59.800 52.381 0.00 0.0 41.71 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1097 1099 1.528076 TTGCCGTCAAGGTGCACAT 60.528 52.632 20.43 9.24 43.70 3.21 R
2999 3059 1.212935 GAACCATGAGCATAGGTGGGT 59.787 52.381 0.00 0.00 35.42 4.51 R
3364 3431 8.079809 CCACTTTCAAACCTGACGTATTAAAAT 58.920 33.333 0.00 0.00 0.00 1.82 R
3747 3814 0.972134 TCTTCTGTGAGCCTGGACAG 59.028 55.000 7.51 7.51 40.89 3.51 R
4909 8317 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.935818 AGGAGAGGAGATGACTTACGA 57.064 47.619 0.00 0.00 0.00 3.43
21 22 3.815809 AGGAGAGGAGATGACTTACGAG 58.184 50.000 0.00 0.00 0.00 4.18
22 23 3.456644 AGGAGAGGAGATGACTTACGAGA 59.543 47.826 0.00 0.00 0.00 4.04
23 24 3.813166 GGAGAGGAGATGACTTACGAGAG 59.187 52.174 0.00 0.00 0.00 3.20
24 25 4.443739 GGAGAGGAGATGACTTACGAGAGA 60.444 50.000 0.00 0.00 0.00 3.10
25 26 5.105567 AGAGGAGATGACTTACGAGAGAA 57.894 43.478 0.00 0.00 0.00 2.87
26 27 5.123227 AGAGGAGATGACTTACGAGAGAAG 58.877 45.833 0.00 0.00 0.00 2.85
27 28 4.204012 AGGAGATGACTTACGAGAGAAGG 58.796 47.826 0.00 0.00 0.00 3.46
28 29 3.243267 GGAGATGACTTACGAGAGAAGGC 60.243 52.174 0.00 0.00 32.08 4.35
29 30 3.357203 AGATGACTTACGAGAGAAGGCA 58.643 45.455 0.00 0.00 45.86 4.75
30 31 3.764434 AGATGACTTACGAGAGAAGGCAA 59.236 43.478 0.00 0.00 44.97 4.52
31 32 4.220821 AGATGACTTACGAGAGAAGGCAAA 59.779 41.667 0.00 0.00 44.97 3.68
32 33 4.330944 TGACTTACGAGAGAAGGCAAAA 57.669 40.909 0.00 0.00 39.02 2.44
33 34 4.699637 TGACTTACGAGAGAAGGCAAAAA 58.300 39.130 0.00 0.00 39.02 1.94
59 60 1.029681 AAAAACCCGGACAGACTTGC 58.970 50.000 0.73 0.00 0.00 4.01
60 61 0.822121 AAAACCCGGACAGACTTGCC 60.822 55.000 0.73 0.00 0.00 4.52
61 62 3.530910 AACCCGGACAGACTTGCCG 62.531 63.158 0.73 5.90 40.97 5.69
62 63 3.691342 CCCGGACAGACTTGCCGA 61.691 66.667 0.73 0.00 42.64 5.54
63 64 2.432628 CCGGACAGACTTGCCGAC 60.433 66.667 13.01 0.00 42.64 4.79
64 65 2.651361 CGGACAGACTTGCCGACT 59.349 61.111 6.89 0.00 42.64 4.18
65 66 1.444553 CGGACAGACTTGCCGACTC 60.445 63.158 6.89 0.00 42.64 3.36
66 67 1.079750 GGACAGACTTGCCGACTCC 60.080 63.158 0.00 0.00 0.00 3.85
800 801 2.188062 TCCACCGGTAAGCGAAAATT 57.812 45.000 6.87 0.00 0.00 1.82
820 821 1.185315 CCGAACCGAAACCCTACCTA 58.815 55.000 0.00 0.00 0.00 3.08
822 823 1.134995 CGAACCGAAACCCTACCTACC 60.135 57.143 0.00 0.00 0.00 3.18
823 824 2.182827 GAACCGAAACCCTACCTACCT 58.817 52.381 0.00 0.00 0.00 3.08
847 848 1.196354 CTTCTTCTCGTGCTTGCTTGG 59.804 52.381 0.00 0.00 0.00 3.61
1026 1027 1.734748 GGACCCTTCGAGATCCGTC 59.265 63.158 3.97 0.00 39.75 4.79
1080 1082 0.881118 TCTTCTTGCATTTCCGTGGC 59.119 50.000 0.00 0.00 0.00 5.01
1097 1099 3.058570 CGTGGCTTTGCTTGTTGTATGTA 60.059 43.478 0.00 0.00 0.00 2.29
1098 1100 4.379394 CGTGGCTTTGCTTGTTGTATGTAT 60.379 41.667 0.00 0.00 0.00 2.29
1099 1101 4.858692 GTGGCTTTGCTTGTTGTATGTATG 59.141 41.667 0.00 0.00 0.00 2.39
1100 1102 4.522405 TGGCTTTGCTTGTTGTATGTATGT 59.478 37.500 0.00 0.00 0.00 2.29
1295 1297 1.135024 CCATCGGCATTTTCCTTGTGG 60.135 52.381 0.00 0.00 0.00 4.17
1369 1371 7.492524 TGTAGAGTGCCACTTAATCTGATAAG 58.507 38.462 0.00 0.00 38.56 1.73
1891 1937 2.301870 TCTGCACTATTTGTCGGGACTT 59.698 45.455 0.00 0.00 0.00 3.01
2205 2251 6.360370 TTGAGTTCCTGTTGTCTAATAGCT 57.640 37.500 0.00 0.00 0.00 3.32
2214 2260 6.183361 CCTGTTGTCTAATAGCTGGGTTCTAT 60.183 42.308 0.00 0.00 0.00 1.98
2751 2799 5.682943 TTATGCGCCATTTATCAAGGTAC 57.317 39.130 4.18 0.00 0.00 3.34
2752 2800 2.992593 TGCGCCATTTATCAAGGTACA 58.007 42.857 4.18 0.00 0.00 2.90
2842 2895 6.128391 CGAACTTGCTAATTACAGGCTTACAA 60.128 38.462 0.00 0.00 0.00 2.41
2999 3059 7.182817 AGGAGCACACAGTTGAAGTATATTA 57.817 36.000 0.00 0.00 0.00 0.98
3028 3088 6.069963 ACCTATGCTCATGGTTCTAGTCTTTT 60.070 38.462 0.00 0.00 0.00 2.27
3143 3210 2.629617 AGAAGCAATTGGGGTTCACTTG 59.370 45.455 7.72 0.00 45.29 3.16
3146 3213 2.906691 CAATTGGGGTTCACTTGCAA 57.093 45.000 0.00 0.00 31.02 4.08
3147 3214 3.191078 CAATTGGGGTTCACTTGCAAA 57.809 42.857 0.00 0.00 31.02 3.68
3148 3215 3.539604 CAATTGGGGTTCACTTGCAAAA 58.460 40.909 0.00 0.00 31.02 2.44
3149 3216 3.922171 ATTGGGGTTCACTTGCAAAAA 57.078 38.095 0.00 0.00 0.00 1.94
3224 3291 2.825861 ACGGAAGAAAGAAGCGGTAA 57.174 45.000 0.00 0.00 0.00 2.85
3364 3431 6.325919 AGTTCGAGGTTGCAATTTAAATGA 57.674 33.333 0.59 0.00 0.00 2.57
3365 3432 6.924111 AGTTCGAGGTTGCAATTTAAATGAT 58.076 32.000 0.59 0.00 0.00 2.45
3552 3619 1.200020 CTTTCCAAGGGAATCACACGC 59.800 52.381 0.00 0.00 41.71 5.34
3555 3622 1.671054 CAAGGGAATCACACGCGGT 60.671 57.895 12.47 2.05 0.00 5.68
3747 3814 3.998341 TCAGCGTACCACTTGATTTTACC 59.002 43.478 0.00 0.00 0.00 2.85
3770 3837 3.181440 TGTCCAGGCTCACAGAAGAAAAT 60.181 43.478 0.00 0.00 0.00 1.82
4018 4085 1.135083 AGCGACATCGTTTCTTCGGAT 60.135 47.619 2.85 0.00 42.22 4.18
4071 4138 4.504858 ACAGATTTGTCGGTTATCCTGAC 58.495 43.478 0.00 7.47 37.58 3.51
4265 4346 0.608640 AGTCTTCCCGTACTGGCAAG 59.391 55.000 0.00 4.24 35.87 4.01
4294 4375 8.141909 CGATCCAGATTGTTATCTAGGTTGTAA 58.858 37.037 0.00 0.00 39.11 2.41
4297 4378 9.613428 TCCAGATTGTTATCTAGGTTGTAAATG 57.387 33.333 0.00 0.00 39.11 2.32
4298 4379 9.396022 CCAGATTGTTATCTAGGTTGTAAATGT 57.604 33.333 0.00 0.00 39.11 2.71
4317 7717 9.567848 GTAAATGTAGTGAAATTATTGTGGGTG 57.432 33.333 0.00 0.00 0.00 4.61
4342 7742 9.123902 TGGAGTTGAATGAGGACAATTATTATG 57.876 33.333 0.00 0.00 0.00 1.90
4369 7769 1.810755 GTGCTGCACCTAAGTTAACCC 59.189 52.381 21.78 0.00 0.00 4.11
4388 7788 0.588252 CGGCAGTTCCTGACTTTGTG 59.412 55.000 0.00 0.00 37.36 3.33
4423 7827 2.164017 TGATGAATGAAACATGCCGGTG 59.836 45.455 1.90 0.00 0.00 4.94
4424 7828 1.902938 TGAATGAAACATGCCGGTGA 58.097 45.000 1.90 0.00 0.00 4.02
4425 7829 1.539388 TGAATGAAACATGCCGGTGAC 59.461 47.619 1.90 0.00 0.00 3.67
4426 7830 1.812571 GAATGAAACATGCCGGTGACT 59.187 47.619 1.90 0.00 0.00 3.41
4427 7831 1.167851 ATGAAACATGCCGGTGACTG 58.832 50.000 1.90 0.00 0.00 3.51
4428 7832 0.179032 TGAAACATGCCGGTGACTGT 60.179 50.000 1.90 0.00 0.00 3.55
4429 7833 0.951558 GAAACATGCCGGTGACTGTT 59.048 50.000 1.90 5.30 33.45 3.16
4430 7834 1.336755 GAAACATGCCGGTGACTGTTT 59.663 47.619 18.91 18.91 42.71 2.83
4431 7835 1.398692 AACATGCCGGTGACTGTTTT 58.601 45.000 1.90 0.00 0.00 2.43
4432 7836 0.951558 ACATGCCGGTGACTGTTTTC 59.048 50.000 1.90 0.00 0.00 2.29
4433 7837 0.110238 CATGCCGGTGACTGTTTTCG 60.110 55.000 1.90 0.00 0.00 3.46
4434 7838 0.250124 ATGCCGGTGACTGTTTTCGA 60.250 50.000 1.90 0.00 0.00 3.71
4435 7839 0.462225 TGCCGGTGACTGTTTTCGAA 60.462 50.000 1.90 0.00 0.00 3.71
4436 7840 0.234884 GCCGGTGACTGTTTTCGAAG 59.765 55.000 1.90 0.00 0.00 3.79
4437 7841 0.234884 CCGGTGACTGTTTTCGAAGC 59.765 55.000 0.00 0.00 0.00 3.86
4438 7842 0.234884 CGGTGACTGTTTTCGAAGCC 59.765 55.000 0.00 0.00 0.00 4.35
4439 7843 0.591659 GGTGACTGTTTTCGAAGCCC 59.408 55.000 0.00 0.00 0.00 5.19
4440 7844 1.305201 GTGACTGTTTTCGAAGCCCA 58.695 50.000 0.00 0.00 0.00 5.36
4441 7845 1.673920 GTGACTGTTTTCGAAGCCCAA 59.326 47.619 0.00 0.00 0.00 4.12
4442 7846 1.946768 TGACTGTTTTCGAAGCCCAAG 59.053 47.619 0.00 0.00 0.00 3.61
4443 7847 0.668535 ACTGTTTTCGAAGCCCAAGC 59.331 50.000 0.00 0.00 40.32 4.01
4473 7877 4.578105 GCTCCCTCAGGAATAGTCAAATTG 59.422 45.833 0.00 0.00 43.40 2.32
4476 7880 6.789268 TCCCTCAGGAATAGTCAAATTGAAA 58.211 36.000 0.00 0.00 40.08 2.69
4481 7885 9.748708 CTCAGGAATAGTCAAATTGAAAAACAA 57.251 29.630 0.00 0.00 42.95 2.83
4630 8038 6.051074 CAGACAAAAAGGAAAAATTGGCTCT 58.949 36.000 0.00 0.00 39.06 4.09
4639 8047 4.690748 GGAAAAATTGGCTCTACAAAAGGC 59.309 41.667 0.00 0.00 39.62 4.35
4658 8066 7.967890 AAAGGCTTTGGAAATAGACATTTTG 57.032 32.000 12.53 0.00 34.44 2.44
4708 8116 6.387465 CAGAGCATCACAAATGTCATTTCTT 58.613 36.000 7.87 0.00 37.82 2.52
4709 8117 6.527023 CAGAGCATCACAAATGTCATTTCTTC 59.473 38.462 7.87 0.15 37.82 2.87
4710 8118 5.396484 AGCATCACAAATGTCATTTCTTCG 58.604 37.500 7.87 0.33 0.00 3.79
4711 8119 5.048504 AGCATCACAAATGTCATTTCTTCGT 60.049 36.000 7.87 0.94 0.00 3.85
4712 8120 6.149308 AGCATCACAAATGTCATTTCTTCGTA 59.851 34.615 7.87 0.00 0.00 3.43
4713 8121 6.801377 GCATCACAAATGTCATTTCTTCGTAA 59.199 34.615 7.87 0.00 0.00 3.18
4714 8122 7.325821 GCATCACAAATGTCATTTCTTCGTAAA 59.674 33.333 7.87 0.00 0.00 2.01
4715 8123 9.179552 CATCACAAATGTCATTTCTTCGTAAAA 57.820 29.630 7.87 0.00 0.00 1.52
4716 8124 8.555166 TCACAAATGTCATTTCTTCGTAAAAC 57.445 30.769 7.87 0.00 0.00 2.43
4717 8125 8.402472 TCACAAATGTCATTTCTTCGTAAAACT 58.598 29.630 7.87 0.00 0.00 2.66
4718 8126 8.471457 CACAAATGTCATTTCTTCGTAAAACTG 58.529 33.333 7.87 0.00 0.00 3.16
4719 8127 8.188139 ACAAATGTCATTTCTTCGTAAAACTGT 58.812 29.630 7.87 0.00 0.00 3.55
4720 8128 8.471457 CAAATGTCATTTCTTCGTAAAACTGTG 58.529 33.333 7.87 0.00 0.00 3.66
4721 8129 5.507077 TGTCATTTCTTCGTAAAACTGTGC 58.493 37.500 0.00 0.00 0.00 4.57
4722 8130 5.065346 TGTCATTTCTTCGTAAAACTGTGCA 59.935 36.000 0.00 0.00 0.00 4.57
4723 8131 5.395486 GTCATTTCTTCGTAAAACTGTGCAC 59.605 40.000 10.75 10.75 0.00 4.57
4724 8132 4.948608 TTTCTTCGTAAAACTGTGCACA 57.051 36.364 20.37 20.37 0.00 4.57
4725 8133 3.936902 TCTTCGTAAAACTGTGCACAC 57.063 42.857 17.42 3.90 0.00 3.82
4726 8134 3.263261 TCTTCGTAAAACTGTGCACACA 58.737 40.909 17.42 3.06 39.32 3.72
4737 8145 1.948104 GTGCACACACACCTAGAACA 58.052 50.000 13.17 0.00 46.61 3.18
4738 8146 1.597663 GTGCACACACACCTAGAACAC 59.402 52.381 13.17 0.00 46.61 3.32
4739 8147 1.484653 TGCACACACACCTAGAACACT 59.515 47.619 0.00 0.00 0.00 3.55
4740 8148 2.696187 TGCACACACACCTAGAACACTA 59.304 45.455 0.00 0.00 0.00 2.74
4741 8149 3.133183 TGCACACACACCTAGAACACTAA 59.867 43.478 0.00 0.00 0.00 2.24
4742 8150 3.741344 GCACACACACCTAGAACACTAAG 59.259 47.826 0.00 0.00 0.00 2.18
4743 8151 3.741344 CACACACACCTAGAACACTAAGC 59.259 47.826 0.00 0.00 0.00 3.09
4744 8152 3.386726 ACACACACCTAGAACACTAAGCA 59.613 43.478 0.00 0.00 0.00 3.91
4745 8153 4.040461 ACACACACCTAGAACACTAAGCAT 59.960 41.667 0.00 0.00 0.00 3.79
4746 8154 5.245301 ACACACACCTAGAACACTAAGCATA 59.755 40.000 0.00 0.00 0.00 3.14
4747 8155 6.070767 ACACACACCTAGAACACTAAGCATAT 60.071 38.462 0.00 0.00 0.00 1.78
4748 8156 6.818644 CACACACCTAGAACACTAAGCATATT 59.181 38.462 0.00 0.00 0.00 1.28
4749 8157 7.334421 CACACACCTAGAACACTAAGCATATTT 59.666 37.037 0.00 0.00 0.00 1.40
4750 8158 8.537016 ACACACCTAGAACACTAAGCATATTTA 58.463 33.333 0.00 0.00 0.00 1.40
4751 8159 9.547753 CACACCTAGAACACTAAGCATATTTAT 57.452 33.333 0.00 0.00 0.00 1.40
4752 8160 9.547753 ACACCTAGAACACTAAGCATATTTATG 57.452 33.333 0.00 0.00 36.78 1.90
4767 8175 6.980593 CATATTTATGCCATTTTTCTCCGGA 58.019 36.000 2.93 2.93 0.00 5.14
4768 8176 7.605449 CATATTTATGCCATTTTTCTCCGGAT 58.395 34.615 3.57 0.00 0.00 4.18
4769 8177 5.930837 TTTATGCCATTTTTCTCCGGATT 57.069 34.783 3.57 0.00 0.00 3.01
4770 8178 5.930837 TTATGCCATTTTTCTCCGGATTT 57.069 34.783 3.57 0.00 0.00 2.17
4771 8179 4.824479 ATGCCATTTTTCTCCGGATTTT 57.176 36.364 3.57 0.00 0.00 1.82
4772 8180 4.615588 TGCCATTTTTCTCCGGATTTTT 57.384 36.364 3.57 0.00 0.00 1.94
4773 8181 4.314121 TGCCATTTTTCTCCGGATTTTTG 58.686 39.130 3.57 0.00 0.00 2.44
4774 8182 4.039730 TGCCATTTTTCTCCGGATTTTTGA 59.960 37.500 3.57 0.00 0.00 2.69
4775 8183 5.178061 GCCATTTTTCTCCGGATTTTTGAT 58.822 37.500 3.57 0.00 0.00 2.57
4776 8184 5.643348 GCCATTTTTCTCCGGATTTTTGATT 59.357 36.000 3.57 0.00 0.00 2.57
4777 8185 6.149308 GCCATTTTTCTCCGGATTTTTGATTT 59.851 34.615 3.57 0.00 0.00 2.17
4778 8186 7.520686 CCATTTTTCTCCGGATTTTTGATTTG 58.479 34.615 3.57 0.00 0.00 2.32
4779 8187 6.538189 TTTTTCTCCGGATTTTTGATTTGC 57.462 33.333 3.57 0.00 0.00 3.68
4780 8188 3.866883 TCTCCGGATTTTTGATTTGCC 57.133 42.857 3.57 0.00 0.00 4.52
4781 8189 3.430453 TCTCCGGATTTTTGATTTGCCT 58.570 40.909 3.57 0.00 0.00 4.75
4782 8190 3.831911 TCTCCGGATTTTTGATTTGCCTT 59.168 39.130 3.57 0.00 0.00 4.35
4783 8191 3.924144 TCCGGATTTTTGATTTGCCTTG 58.076 40.909 0.00 0.00 0.00 3.61
4784 8192 2.416202 CCGGATTTTTGATTTGCCTTGC 59.584 45.455 0.00 0.00 0.00 4.01
4785 8193 3.328505 CGGATTTTTGATTTGCCTTGCT 58.671 40.909 0.00 0.00 0.00 3.91
4786 8194 4.493547 CGGATTTTTGATTTGCCTTGCTA 58.506 39.130 0.00 0.00 0.00 3.49
4787 8195 5.111293 CGGATTTTTGATTTGCCTTGCTAT 58.889 37.500 0.00 0.00 0.00 2.97
4788 8196 6.272318 CGGATTTTTGATTTGCCTTGCTATA 58.728 36.000 0.00 0.00 0.00 1.31
4789 8197 6.925165 CGGATTTTTGATTTGCCTTGCTATAT 59.075 34.615 0.00 0.00 0.00 0.86
4790 8198 7.439056 CGGATTTTTGATTTGCCTTGCTATATT 59.561 33.333 0.00 0.00 0.00 1.28
4791 8199 9.112725 GGATTTTTGATTTGCCTTGCTATATTT 57.887 29.630 0.00 0.00 0.00 1.40
4795 8203 9.499479 TTTTGATTTGCCTTGCTATATTTTTGA 57.501 25.926 0.00 0.00 0.00 2.69
4796 8204 9.499479 TTTGATTTGCCTTGCTATATTTTTGAA 57.501 25.926 0.00 0.00 0.00 2.69
4797 8205 9.669887 TTGATTTGCCTTGCTATATTTTTGAAT 57.330 25.926 0.00 0.00 0.00 2.57
4798 8206 9.100554 TGATTTGCCTTGCTATATTTTTGAATG 57.899 29.630 0.00 0.00 0.00 2.67
4799 8207 9.101655 GATTTGCCTTGCTATATTTTTGAATGT 57.898 29.630 0.00 0.00 0.00 2.71
4801 8209 8.925161 TTGCCTTGCTATATTTTTGAATGTAC 57.075 30.769 0.00 0.00 0.00 2.90
4802 8210 8.292444 TGCCTTGCTATATTTTTGAATGTACT 57.708 30.769 0.00 0.00 0.00 2.73
4803 8211 8.190122 TGCCTTGCTATATTTTTGAATGTACTG 58.810 33.333 0.00 0.00 0.00 2.74
4804 8212 8.190784 GCCTTGCTATATTTTTGAATGTACTGT 58.809 33.333 0.00 0.00 0.00 3.55
4811 8219 6.932901 ATTTTTGAATGTACTGTTCATGCG 57.067 33.333 12.79 0.00 35.68 4.73
4812 8220 4.418013 TTTGAATGTACTGTTCATGCGG 57.582 40.909 12.79 0.00 35.68 5.69
4813 8221 2.355197 TGAATGTACTGTTCATGCGGG 58.645 47.619 9.31 0.00 31.07 6.13
4814 8222 1.064060 GAATGTACTGTTCATGCGGGC 59.936 52.381 0.47 0.00 0.00 6.13
4815 8223 1.089481 ATGTACTGTTCATGCGGGCG 61.089 55.000 0.00 0.00 0.00 6.13
4816 8224 2.125310 TACTGTTCATGCGGGCGG 60.125 61.111 0.00 0.00 0.00 6.13
4817 8225 3.673956 TACTGTTCATGCGGGCGGG 62.674 63.158 0.00 0.00 0.00 6.13
4832 8240 2.349755 GGGGCCTTGTGCGAACTA 59.650 61.111 0.84 0.00 42.61 2.24
4833 8241 1.077716 GGGGCCTTGTGCGAACTAT 60.078 57.895 0.84 0.00 42.61 2.12
4834 8242 1.376609 GGGGCCTTGTGCGAACTATG 61.377 60.000 0.84 0.00 42.61 2.23
4835 8243 0.676782 GGGCCTTGTGCGAACTATGT 60.677 55.000 0.84 0.00 42.61 2.29
4836 8244 1.165270 GGCCTTGTGCGAACTATGTT 58.835 50.000 0.00 0.00 42.61 2.71
4837 8245 1.135689 GGCCTTGTGCGAACTATGTTG 60.136 52.381 0.00 0.00 42.61 3.33
4838 8246 1.535462 GCCTTGTGCGAACTATGTTGT 59.465 47.619 0.00 0.00 0.00 3.32
4839 8247 2.031157 GCCTTGTGCGAACTATGTTGTT 60.031 45.455 0.00 0.00 0.00 2.83
4840 8248 3.810373 CCTTGTGCGAACTATGTTGTTC 58.190 45.455 0.00 0.00 41.91 3.18
4849 8257 5.030874 GAACTATGTTGTTCGAAGGTTGG 57.969 43.478 0.00 0.00 37.24 3.77
4850 8258 4.081322 ACTATGTTGTTCGAAGGTTGGT 57.919 40.909 0.00 0.00 0.00 3.67
4851 8259 4.457466 ACTATGTTGTTCGAAGGTTGGTT 58.543 39.130 0.00 0.00 0.00 3.67
4852 8260 4.885325 ACTATGTTGTTCGAAGGTTGGTTT 59.115 37.500 0.00 0.00 0.00 3.27
4853 8261 4.729227 ATGTTGTTCGAAGGTTGGTTTT 57.271 36.364 0.00 0.00 0.00 2.43
4854 8262 3.839293 TGTTGTTCGAAGGTTGGTTTTG 58.161 40.909 0.00 0.00 0.00 2.44
4855 8263 3.183754 GTTGTTCGAAGGTTGGTTTTGG 58.816 45.455 0.00 0.00 0.00 3.28
4856 8264 2.724454 TGTTCGAAGGTTGGTTTTGGA 58.276 42.857 0.00 0.00 0.00 3.53
4857 8265 3.090037 TGTTCGAAGGTTGGTTTTGGAA 58.910 40.909 0.00 0.00 0.00 3.53
4858 8266 3.510360 TGTTCGAAGGTTGGTTTTGGAAA 59.490 39.130 0.00 0.00 0.00 3.13
4859 8267 4.109766 GTTCGAAGGTTGGTTTTGGAAAG 58.890 43.478 0.00 0.00 0.00 2.62
4860 8268 2.691011 TCGAAGGTTGGTTTTGGAAAGG 59.309 45.455 0.00 0.00 0.00 3.11
4861 8269 2.223947 CGAAGGTTGGTTTTGGAAAGGG 60.224 50.000 0.00 0.00 0.00 3.95
4862 8270 2.858787 AGGTTGGTTTTGGAAAGGGA 57.141 45.000 0.00 0.00 0.00 4.20
4863 8271 2.677914 AGGTTGGTTTTGGAAAGGGAG 58.322 47.619 0.00 0.00 0.00 4.30
4864 8272 1.691976 GGTTGGTTTTGGAAAGGGAGG 59.308 52.381 0.00 0.00 0.00 4.30
4865 8273 2.394632 GTTGGTTTTGGAAAGGGAGGT 58.605 47.619 0.00 0.00 0.00 3.85
4866 8274 3.568443 GTTGGTTTTGGAAAGGGAGGTA 58.432 45.455 0.00 0.00 0.00 3.08
4867 8275 3.518992 TGGTTTTGGAAAGGGAGGTAG 57.481 47.619 0.00 0.00 0.00 3.18
4868 8276 2.787035 TGGTTTTGGAAAGGGAGGTAGT 59.213 45.455 0.00 0.00 0.00 2.73
4869 8277 3.982052 TGGTTTTGGAAAGGGAGGTAGTA 59.018 43.478 0.00 0.00 0.00 1.82
4870 8278 4.202493 TGGTTTTGGAAAGGGAGGTAGTAC 60.202 45.833 0.00 0.00 0.00 2.73
4871 8279 4.202493 GGTTTTGGAAAGGGAGGTAGTACA 60.202 45.833 2.06 0.00 0.00 2.90
4872 8280 5.379187 GTTTTGGAAAGGGAGGTAGTACAA 58.621 41.667 2.06 0.00 0.00 2.41
4873 8281 5.649970 TTTGGAAAGGGAGGTAGTACAAA 57.350 39.130 2.06 0.00 0.00 2.83
4874 8282 5.649970 TTGGAAAGGGAGGTAGTACAAAA 57.350 39.130 2.06 0.00 0.00 2.44
4875 8283 4.976864 TGGAAAGGGAGGTAGTACAAAAC 58.023 43.478 2.06 0.00 0.00 2.43
4876 8284 3.999001 GGAAAGGGAGGTAGTACAAAACG 59.001 47.826 2.06 0.00 0.00 3.60
4877 8285 4.262592 GGAAAGGGAGGTAGTACAAAACGA 60.263 45.833 2.06 0.00 0.00 3.85
4878 8286 5.485620 GAAAGGGAGGTAGTACAAAACGAT 58.514 41.667 2.06 0.00 0.00 3.73
4879 8287 4.732672 AGGGAGGTAGTACAAAACGATC 57.267 45.455 2.06 0.00 0.00 3.69
4880 8288 3.129988 AGGGAGGTAGTACAAAACGATCG 59.870 47.826 14.88 14.88 0.00 3.69
4881 8289 3.119352 GGGAGGTAGTACAAAACGATCGT 60.119 47.826 16.60 16.60 0.00 3.73
4882 8290 4.096382 GGGAGGTAGTACAAAACGATCGTA 59.904 45.833 23.04 1.63 0.00 3.43
4883 8291 5.030936 GGAGGTAGTACAAAACGATCGTAC 58.969 45.833 23.04 15.42 36.57 3.67
4884 8292 5.391950 GGAGGTAGTACAAAACGATCGTACA 60.392 44.000 23.04 2.08 38.35 2.90
4885 8293 5.393962 AGGTAGTACAAAACGATCGTACAC 58.606 41.667 23.04 14.15 38.35 2.90
4886 8294 4.260656 GGTAGTACAAAACGATCGTACACG 59.739 45.833 23.04 12.75 38.35 4.49
4887 8295 3.888934 AGTACAAAACGATCGTACACGT 58.111 40.909 23.04 17.66 44.57 4.49
4888 8296 3.665409 AGTACAAAACGATCGTACACGTG 59.335 43.478 23.04 15.48 42.43 4.49
4889 8297 2.730069 ACAAAACGATCGTACACGTGA 58.270 42.857 25.01 2.68 42.43 4.35
4890 8298 3.114809 ACAAAACGATCGTACACGTGAA 58.885 40.909 25.01 4.81 42.43 3.18
4891 8299 3.180980 ACAAAACGATCGTACACGTGAAG 59.819 43.478 25.01 12.66 42.43 3.02
4892 8300 1.334054 AACGATCGTACACGTGAAGC 58.666 50.000 25.01 10.42 42.43 3.86
4893 8301 0.239082 ACGATCGTACACGTGAAGCA 59.761 50.000 25.01 3.36 41.17 3.91
4894 8302 1.333115 CGATCGTACACGTGAAGCAA 58.667 50.000 25.01 3.65 40.80 3.91
4895 8303 1.057285 CGATCGTACACGTGAAGCAAC 59.943 52.381 25.01 10.61 40.80 4.17
4896 8304 2.325761 GATCGTACACGTGAAGCAACT 58.674 47.619 25.01 0.00 40.80 3.16
4897 8305 1.483316 TCGTACACGTGAAGCAACTG 58.517 50.000 25.01 8.38 40.80 3.16
4898 8306 0.111266 CGTACACGTGAAGCAACTGC 60.111 55.000 25.01 0.00 36.50 4.40
4899 8307 2.455983 CGTACACGTGAAGCAACTGCT 61.456 52.381 25.01 0.00 43.53 4.24
4900 8308 3.171675 CGTACACGTGAAGCAACTGCTA 61.172 50.000 25.01 0.00 41.96 3.49
4901 8309 4.458654 CGTACACGTGAAGCAACTGCTAT 61.459 47.826 25.01 0.00 41.96 2.97
4902 8310 5.894673 CGTACACGTGAAGCAACTGCTATT 61.895 45.833 25.01 0.00 41.96 1.73
4903 8311 6.625711 CGTACACGTGAAGCAACTGCTATTA 61.626 44.000 25.01 0.00 41.96 0.98
4904 8312 8.328707 CGTACACGTGAAGCAACTGCTATTAG 62.329 46.154 25.01 0.65 41.96 1.73
4918 8326 4.195225 GCTATTAGCATGTACTCCCTCC 57.805 50.000 10.83 0.00 41.89 4.30
4919 8327 3.367498 GCTATTAGCATGTACTCCCTCCG 60.367 52.174 10.83 0.00 41.89 4.63
4920 8328 2.154567 TTAGCATGTACTCCCTCCGT 57.845 50.000 0.00 0.00 0.00 4.69
4921 8329 1.688772 TAGCATGTACTCCCTCCGTC 58.311 55.000 0.00 0.00 0.00 4.79
4922 8330 1.043673 AGCATGTACTCCCTCCGTCC 61.044 60.000 0.00 0.00 0.00 4.79
4923 8331 2.029307 GCATGTACTCCCTCCGTCCC 62.029 65.000 0.00 0.00 0.00 4.46
4924 8332 0.686441 CATGTACTCCCTCCGTCCCA 60.686 60.000 0.00 0.00 0.00 4.37
4925 8333 0.686769 ATGTACTCCCTCCGTCCCAC 60.687 60.000 0.00 0.00 0.00 4.61
4926 8334 1.304713 GTACTCCCTCCGTCCCACA 60.305 63.158 0.00 0.00 0.00 4.17
4927 8335 0.901580 GTACTCCCTCCGTCCCACAA 60.902 60.000 0.00 0.00 0.00 3.33
4928 8336 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
4929 8337 0.042131 ACTCCCTCCGTCCCACAATA 59.958 55.000 0.00 0.00 0.00 1.90
4930 8338 0.753262 CTCCCTCCGTCCCACAATAG 59.247 60.000 0.00 0.00 0.00 1.73
4931 8339 0.337082 TCCCTCCGTCCCACAATAGA 59.663 55.000 0.00 0.00 0.00 1.98
4932 8340 1.200519 CCCTCCGTCCCACAATAGAA 58.799 55.000 0.00 0.00 0.00 2.10
4933 8341 1.557832 CCCTCCGTCCCACAATAGAAA 59.442 52.381 0.00 0.00 0.00 2.52
4934 8342 2.026636 CCCTCCGTCCCACAATAGAAAA 60.027 50.000 0.00 0.00 0.00 2.29
4935 8343 3.371595 CCCTCCGTCCCACAATAGAAAAT 60.372 47.826 0.00 0.00 0.00 1.82
4936 8344 3.877508 CCTCCGTCCCACAATAGAAAATC 59.122 47.826 0.00 0.00 0.00 2.17
4937 8345 3.527533 TCCGTCCCACAATAGAAAATCG 58.472 45.455 0.00 0.00 0.00 3.34
4938 8346 3.055675 TCCGTCCCACAATAGAAAATCGT 60.056 43.478 0.00 0.00 0.00 3.73
4939 8347 3.687698 CCGTCCCACAATAGAAAATCGTT 59.312 43.478 0.00 0.00 0.00 3.85
4940 8348 4.155280 CCGTCCCACAATAGAAAATCGTTT 59.845 41.667 0.00 0.00 0.00 3.60
4941 8349 5.335348 CCGTCCCACAATAGAAAATCGTTTT 60.335 40.000 0.00 0.00 35.12 2.43
4942 8350 6.146898 CGTCCCACAATAGAAAATCGTTTTT 58.853 36.000 3.91 3.91 37.75 1.94
4961 8369 8.508875 TCGTTTTTCAAACTATTAGCTTAAGGG 58.491 33.333 4.29 0.00 0.00 3.95
4962 8370 8.294577 CGTTTTTCAAACTATTAGCTTAAGGGT 58.705 33.333 4.29 0.00 0.00 4.34
4966 8374 9.969001 TTTCAAACTATTAGCTTAAGGGTATGT 57.031 29.630 4.29 0.00 0.00 2.29
4967 8375 9.609346 TTCAAACTATTAGCTTAAGGGTATGTC 57.391 33.333 4.29 0.00 0.00 3.06
4968 8376 8.764558 TCAAACTATTAGCTTAAGGGTATGTCA 58.235 33.333 4.29 0.00 0.00 3.58
4969 8377 8.827677 CAAACTATTAGCTTAAGGGTATGTCAC 58.172 37.037 4.29 0.00 0.00 3.67
4984 8392 7.817418 GGTATGTCACCCACATTTACATAAT 57.183 36.000 0.00 0.00 43.89 1.28
4985 8393 7.648142 GGTATGTCACCCACATTTACATAATG 58.352 38.462 0.00 0.00 43.89 1.90
4986 8394 5.574891 TGTCACCCACATTTACATAATGC 57.425 39.130 0.00 0.00 0.00 3.56
4987 8395 5.012893 TGTCACCCACATTTACATAATGCA 58.987 37.500 0.00 0.00 0.00 3.96
4988 8396 5.655974 TGTCACCCACATTTACATAATGCAT 59.344 36.000 0.00 0.00 0.00 3.96
4989 8397 6.830838 TGTCACCCACATTTACATAATGCATA 59.169 34.615 0.00 0.00 0.00 3.14
4990 8398 7.505248 TGTCACCCACATTTACATAATGCATAT 59.495 33.333 0.00 0.00 0.00 1.78
4991 8399 8.023128 GTCACCCACATTTACATAATGCATATC 58.977 37.037 0.00 0.00 0.00 1.63
4992 8400 7.176515 TCACCCACATTTACATAATGCATATCC 59.823 37.037 0.00 0.00 0.00 2.59
4993 8401 7.009550 ACCCACATTTACATAATGCATATCCA 58.990 34.615 0.00 0.00 0.00 3.41
4994 8402 7.508636 ACCCACATTTACATAATGCATATCCAA 59.491 33.333 0.00 0.00 0.00 3.53
4995 8403 8.366401 CCCACATTTACATAATGCATATCCAAA 58.634 33.333 0.00 0.00 0.00 3.28
4996 8404 9.932207 CCACATTTACATAATGCATATCCAAAT 57.068 29.630 0.00 0.23 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.456644 TCTCGTAAGTCATCTCCTCTCCT 59.543 47.826 0.00 0.00 39.48 3.69
1 2 3.811083 TCTCGTAAGTCATCTCCTCTCC 58.189 50.000 0.00 0.00 39.48 3.71
2 3 4.699637 TCTCTCGTAAGTCATCTCCTCTC 58.300 47.826 0.00 0.00 39.48 3.20
3 4 4.764050 TCTCTCGTAAGTCATCTCCTCT 57.236 45.455 0.00 0.00 39.48 3.69
4 5 4.274950 CCTTCTCTCGTAAGTCATCTCCTC 59.725 50.000 0.00 0.00 39.48 3.71
5 6 4.204012 CCTTCTCTCGTAAGTCATCTCCT 58.796 47.826 0.00 0.00 39.48 3.69
6 7 3.243267 GCCTTCTCTCGTAAGTCATCTCC 60.243 52.174 0.00 0.00 39.48 3.71
7 8 3.378742 TGCCTTCTCTCGTAAGTCATCTC 59.621 47.826 0.00 0.00 39.48 2.75
8 9 3.357203 TGCCTTCTCTCGTAAGTCATCT 58.643 45.455 0.00 0.00 39.48 2.90
9 10 3.784701 TGCCTTCTCTCGTAAGTCATC 57.215 47.619 0.00 0.00 39.48 2.92
10 11 4.537135 TTTGCCTTCTCTCGTAAGTCAT 57.463 40.909 0.00 0.00 39.48 3.06
11 12 4.330944 TTTTGCCTTCTCTCGTAAGTCA 57.669 40.909 0.00 0.00 39.48 3.41
40 41 1.029681 GCAAGTCTGTCCGGGTTTTT 58.970 50.000 0.00 0.00 0.00 1.94
41 42 0.822121 GGCAAGTCTGTCCGGGTTTT 60.822 55.000 0.00 0.00 0.00 2.43
42 43 1.228154 GGCAAGTCTGTCCGGGTTT 60.228 57.895 0.00 0.00 0.00 3.27
43 44 2.430367 GGCAAGTCTGTCCGGGTT 59.570 61.111 0.00 0.00 0.00 4.11
44 45 4.003788 CGGCAAGTCTGTCCGGGT 62.004 66.667 0.00 0.00 38.08 5.28
45 46 3.691342 TCGGCAAGTCTGTCCGGG 61.691 66.667 0.00 0.00 40.48 5.73
46 47 2.432628 GTCGGCAAGTCTGTCCGG 60.433 66.667 11.68 0.00 40.48 5.14
47 48 1.444553 GAGTCGGCAAGTCTGTCCG 60.445 63.158 6.69 6.69 41.04 4.79
48 49 1.079750 GGAGTCGGCAAGTCTGTCC 60.080 63.158 0.00 0.00 0.00 4.02
49 50 4.580835 GGAGTCGGCAAGTCTGTC 57.419 61.111 0.00 0.00 0.00 3.51
800 801 0.542702 AGGTAGGGTTTCGGTTCGGA 60.543 55.000 0.00 0.00 0.00 4.55
820 821 3.477210 AGCACGAGAAGAAGAAAAGGT 57.523 42.857 0.00 0.00 0.00 3.50
822 823 3.249559 AGCAAGCACGAGAAGAAGAAAAG 59.750 43.478 0.00 0.00 0.00 2.27
823 824 3.206150 AGCAAGCACGAGAAGAAGAAAA 58.794 40.909 0.00 0.00 0.00 2.29
847 848 0.173708 AGAAATCAGGCCGAGACGTC 59.826 55.000 7.70 7.70 0.00 4.34
850 851 1.339151 ACCAAGAAATCAGGCCGAGAC 60.339 52.381 0.00 0.00 0.00 3.36
979 980 2.200052 GGAAGTCGAGGATCCGGTT 58.800 57.895 5.98 0.00 0.00 4.44
1005 1006 2.417936 GATCTCGAAGGGTCCGCC 59.582 66.667 0.00 0.00 0.00 6.13
1080 1082 5.343058 GTGCACATACATACAACAAGCAAAG 59.657 40.000 13.17 0.00 0.00 2.77
1097 1099 1.528076 TTGCCGTCAAGGTGCACAT 60.528 52.632 20.43 9.24 43.70 3.21
1098 1100 2.124529 TTGCCGTCAAGGTGCACA 60.125 55.556 20.43 0.00 43.70 4.57
1099 1101 2.186826 AGTTGCCGTCAAGGTGCAC 61.187 57.895 8.80 8.80 43.70 4.57
1100 1102 2.186160 CAGTTGCCGTCAAGGTGCA 61.186 57.895 0.00 0.00 43.70 4.57
1276 1278 1.545582 ACCACAAGGAAAATGCCGATG 59.454 47.619 0.00 0.00 38.69 3.84
1295 1297 7.042389 GCTTACCTGAAAGAGTATAATCAGCAC 60.042 40.741 2.62 0.00 38.34 4.40
1369 1371 6.406692 TCCACCAATGCTAGTTATCTCTAC 57.593 41.667 0.00 0.00 0.00 2.59
1508 1510 7.609760 AAAACAAATGAACAGGGAAAGAAAC 57.390 32.000 0.00 0.00 0.00 2.78
1975 2021 3.855689 ACAAGCACAATGAACCATAGC 57.144 42.857 0.00 0.00 0.00 2.97
2205 2251 7.881912 TTCTAGGGCAATATAATAGAACCCA 57.118 36.000 0.00 0.00 38.39 4.51
2323 2371 9.842775 ATAGAGCAATGATAGAAATGAAACTCA 57.157 29.630 0.00 0.00 0.00 3.41
2561 2609 2.697431 GCAAACAGCCATCGTTACAA 57.303 45.000 0.00 0.00 37.23 2.41
2570 2618 8.934495 ACTAGTAGAATAGTCAGCAAACAGCCA 61.934 40.741 3.59 0.00 36.04 4.75
2725 2773 5.163513 CCTTGATAAATGGCGCATAAATCC 58.836 41.667 10.83 0.00 0.00 3.01
2976 3036 6.258068 GGTAATATACTTCAACTGTGTGCTCC 59.742 42.308 0.00 0.00 0.00 4.70
2999 3059 1.212935 GAACCATGAGCATAGGTGGGT 59.787 52.381 0.00 0.00 35.42 4.51
3364 3431 8.079809 CCACTTTCAAACCTGACGTATTAAAAT 58.920 33.333 0.00 0.00 0.00 1.82
3365 3432 7.067251 ACCACTTTCAAACCTGACGTATTAAAA 59.933 33.333 0.00 0.00 0.00 1.52
3373 3440 1.602377 GGACCACTTTCAAACCTGACG 59.398 52.381 0.00 0.00 0.00 4.35
3510 3577 7.798596 AAGTCCACTGCATAAAGATATTCAG 57.201 36.000 0.00 0.00 38.34 3.02
3555 3622 3.070159 CCAAATCTTCATAGCGGGAGAGA 59.930 47.826 0.00 0.00 0.00 3.10
3747 3814 0.972134 TCTTCTGTGAGCCTGGACAG 59.028 55.000 7.51 7.51 40.89 3.51
3770 3837 5.655090 TCCCTATCAAGAACTTGTGACGATA 59.345 40.000 13.15 4.33 41.16 2.92
4018 4085 4.275662 CAATCACGCACGACTTAAAACAA 58.724 39.130 0.00 0.00 0.00 2.83
4071 4138 4.907946 CTGCAAGCACTCAACACG 57.092 55.556 0.00 0.00 0.00 4.49
4265 4346 4.926238 CCTAGATAACAATCTGGATCGTGC 59.074 45.833 0.00 0.00 31.70 5.34
4294 4375 6.951198 TCCACCCACAATAATTTCACTACATT 59.049 34.615 0.00 0.00 0.00 2.71
4296 4377 5.882040 TCCACCCACAATAATTTCACTACA 58.118 37.500 0.00 0.00 0.00 2.74
4297 4378 5.944007 ACTCCACCCACAATAATTTCACTAC 59.056 40.000 0.00 0.00 0.00 2.73
4298 4379 6.134535 ACTCCACCCACAATAATTTCACTA 57.865 37.500 0.00 0.00 0.00 2.74
4300 4381 5.242838 TCAACTCCACCCACAATAATTTCAC 59.757 40.000 0.00 0.00 0.00 3.18
4301 4382 5.389520 TCAACTCCACCCACAATAATTTCA 58.610 37.500 0.00 0.00 0.00 2.69
4302 4383 5.975693 TCAACTCCACCCACAATAATTTC 57.024 39.130 0.00 0.00 0.00 2.17
4303 4384 6.496565 TCATTCAACTCCACCCACAATAATTT 59.503 34.615 0.00 0.00 0.00 1.82
4317 7717 8.571336 CCATAATAATTGTCCTCATTCAACTCC 58.429 37.037 0.00 0.00 0.00 3.85
4342 7742 0.250727 TTAGGTGCAGCACTGGAACC 60.251 55.000 24.75 7.44 39.63 3.62
4423 7827 1.335051 GCTTGGGCTTCGAAAACAGTC 60.335 52.381 0.00 0.00 35.22 3.51
4424 7828 0.668535 GCTTGGGCTTCGAAAACAGT 59.331 50.000 0.00 0.00 35.22 3.55
4425 7829 3.479255 GCTTGGGCTTCGAAAACAG 57.521 52.632 0.00 0.00 35.22 3.16
4436 7840 0.892814 GGGAGCATATGAGCTTGGGC 60.893 60.000 6.97 0.00 46.75 5.36
4437 7841 0.769873 AGGGAGCATATGAGCTTGGG 59.230 55.000 6.97 0.00 46.75 4.12
4438 7842 1.419012 TGAGGGAGCATATGAGCTTGG 59.581 52.381 6.97 0.00 46.75 3.61
4439 7843 2.550423 CCTGAGGGAGCATATGAGCTTG 60.550 54.545 6.97 0.00 46.75 4.01
4440 7844 1.698532 CCTGAGGGAGCATATGAGCTT 59.301 52.381 6.97 0.00 46.75 3.74
4442 7846 1.346062 TCCTGAGGGAGCATATGAGC 58.654 55.000 6.97 0.00 36.57 4.26
4443 7847 4.776837 ACTATTCCTGAGGGAGCATATGAG 59.223 45.833 6.97 0.00 43.29 2.90
4444 7848 4.756564 ACTATTCCTGAGGGAGCATATGA 58.243 43.478 6.97 0.00 43.29 2.15
4445 7849 4.529769 TGACTATTCCTGAGGGAGCATATG 59.470 45.833 0.00 0.00 43.29 1.78
4446 7850 4.756564 TGACTATTCCTGAGGGAGCATAT 58.243 43.478 0.00 0.00 43.29 1.78
4447 7851 4.199002 TGACTATTCCTGAGGGAGCATA 57.801 45.455 0.00 0.00 43.29 3.14
4531 7935 6.365789 TCTTTGGCAGCAAAGAAAATAAATCG 59.634 34.615 13.68 0.00 45.04 3.34
4548 7952 1.003118 ACGCTCCTAACATCTTTGGCA 59.997 47.619 0.00 0.00 0.00 4.92
4630 8038 7.775053 ATGTCTATTTCCAAAGCCTTTTGTA 57.225 32.000 0.00 0.00 41.68 2.41
4639 8047 6.690530 TGCTCCAAAATGTCTATTTCCAAAG 58.309 36.000 0.00 0.00 35.50 2.77
4658 8066 7.704047 GGACAAAGAGAATAAAATCAATGCTCC 59.296 37.037 0.00 0.00 30.22 4.70
4718 8126 1.597663 GTGTTCTAGGTGTGTGTGCAC 59.402 52.381 10.75 10.75 45.44 4.57
4719 8127 1.484653 AGTGTTCTAGGTGTGTGTGCA 59.515 47.619 0.00 0.00 0.00 4.57
4720 8128 2.240493 AGTGTTCTAGGTGTGTGTGC 57.760 50.000 0.00 0.00 0.00 4.57
4721 8129 3.741344 GCTTAGTGTTCTAGGTGTGTGTG 59.259 47.826 0.00 0.00 0.00 3.82
4722 8130 3.386726 TGCTTAGTGTTCTAGGTGTGTGT 59.613 43.478 0.00 0.00 0.00 3.72
4723 8131 3.990092 TGCTTAGTGTTCTAGGTGTGTG 58.010 45.455 0.00 0.00 0.00 3.82
4724 8132 4.891992 ATGCTTAGTGTTCTAGGTGTGT 57.108 40.909 0.00 0.00 0.00 3.72
4725 8133 7.849804 AAATATGCTTAGTGTTCTAGGTGTG 57.150 36.000 0.00 0.00 0.00 3.82
4726 8134 9.547753 CATAAATATGCTTAGTGTTCTAGGTGT 57.452 33.333 0.00 0.00 0.00 4.16
4743 8151 6.980593 TCCGGAGAAAAATGGCATAAATATG 58.019 36.000 0.00 0.00 36.78 1.78
4744 8152 7.781324 ATCCGGAGAAAAATGGCATAAATAT 57.219 32.000 11.34 0.00 0.00 1.28
4745 8153 7.595819 AATCCGGAGAAAAATGGCATAAATA 57.404 32.000 11.34 0.00 0.00 1.40
4746 8154 6.484364 AATCCGGAGAAAAATGGCATAAAT 57.516 33.333 11.34 0.00 0.00 1.40
4747 8155 5.930837 AATCCGGAGAAAAATGGCATAAA 57.069 34.783 11.34 0.00 0.00 1.40
4748 8156 5.930837 AAATCCGGAGAAAAATGGCATAA 57.069 34.783 11.34 0.00 0.00 1.90
4749 8157 5.930837 AAAATCCGGAGAAAAATGGCATA 57.069 34.783 11.34 0.00 0.00 3.14
4750 8158 4.824479 AAAATCCGGAGAAAAATGGCAT 57.176 36.364 11.34 0.00 0.00 4.40
4751 8159 4.039730 TCAAAAATCCGGAGAAAAATGGCA 59.960 37.500 11.34 0.00 0.00 4.92
4752 8160 4.565022 TCAAAAATCCGGAGAAAAATGGC 58.435 39.130 11.34 0.00 0.00 4.40
4753 8161 7.520686 CAAATCAAAAATCCGGAGAAAAATGG 58.479 34.615 11.34 0.00 0.00 3.16
4754 8162 7.017055 GCAAATCAAAAATCCGGAGAAAAATG 58.983 34.615 11.34 4.36 0.00 2.32
4755 8163 6.149308 GGCAAATCAAAAATCCGGAGAAAAAT 59.851 34.615 11.34 0.00 0.00 1.82
4756 8164 5.468409 GGCAAATCAAAAATCCGGAGAAAAA 59.532 36.000 11.34 0.00 0.00 1.94
4757 8165 4.994217 GGCAAATCAAAAATCCGGAGAAAA 59.006 37.500 11.34 0.00 0.00 2.29
4758 8166 4.283212 AGGCAAATCAAAAATCCGGAGAAA 59.717 37.500 11.34 0.00 0.00 2.52
4759 8167 3.831911 AGGCAAATCAAAAATCCGGAGAA 59.168 39.130 11.34 0.00 0.00 2.87
4760 8168 3.430453 AGGCAAATCAAAAATCCGGAGA 58.570 40.909 11.34 0.59 0.00 3.71
4761 8169 3.874392 AGGCAAATCAAAAATCCGGAG 57.126 42.857 11.34 0.00 0.00 4.63
4762 8170 3.864160 GCAAGGCAAATCAAAAATCCGGA 60.864 43.478 6.61 6.61 0.00 5.14
4763 8171 2.416202 GCAAGGCAAATCAAAAATCCGG 59.584 45.455 0.00 0.00 0.00 5.14
4764 8172 3.328505 AGCAAGGCAAATCAAAAATCCG 58.671 40.909 0.00 0.00 0.00 4.18
4765 8173 8.667076 AATATAGCAAGGCAAATCAAAAATCC 57.333 30.769 0.00 0.00 0.00 3.01
4769 8177 9.499479 TCAAAAATATAGCAAGGCAAATCAAAA 57.501 25.926 0.00 0.00 0.00 2.44
4770 8178 9.499479 TTCAAAAATATAGCAAGGCAAATCAAA 57.501 25.926 0.00 0.00 0.00 2.69
4771 8179 9.669887 ATTCAAAAATATAGCAAGGCAAATCAA 57.330 25.926 0.00 0.00 0.00 2.57
4772 8180 9.100554 CATTCAAAAATATAGCAAGGCAAATCA 57.899 29.630 0.00 0.00 0.00 2.57
4773 8181 9.101655 ACATTCAAAAATATAGCAAGGCAAATC 57.898 29.630 0.00 0.00 0.00 2.17
4775 8183 9.364989 GTACATTCAAAAATATAGCAAGGCAAA 57.635 29.630 0.00 0.00 0.00 3.68
4776 8184 8.748412 AGTACATTCAAAAATATAGCAAGGCAA 58.252 29.630 0.00 0.00 0.00 4.52
4777 8185 8.190122 CAGTACATTCAAAAATATAGCAAGGCA 58.810 33.333 0.00 0.00 0.00 4.75
4778 8186 8.190784 ACAGTACATTCAAAAATATAGCAAGGC 58.809 33.333 0.00 0.00 0.00 4.35
4785 8193 9.715123 CGCATGAACAGTACATTCAAAAATATA 57.285 29.630 14.40 0.00 39.43 0.86
4786 8194 7.701924 CCGCATGAACAGTACATTCAAAAATAT 59.298 33.333 14.40 0.00 39.43 1.28
4787 8195 7.026562 CCGCATGAACAGTACATTCAAAAATA 58.973 34.615 14.40 0.00 39.43 1.40
4788 8196 5.863397 CCGCATGAACAGTACATTCAAAAAT 59.137 36.000 14.40 0.00 39.43 1.82
4789 8197 5.218885 CCGCATGAACAGTACATTCAAAAA 58.781 37.500 14.40 0.00 39.43 1.94
4790 8198 4.320861 CCCGCATGAACAGTACATTCAAAA 60.321 41.667 14.40 0.00 39.43 2.44
4791 8199 3.190327 CCCGCATGAACAGTACATTCAAA 59.810 43.478 14.40 0.00 39.43 2.69
4792 8200 2.746904 CCCGCATGAACAGTACATTCAA 59.253 45.455 14.40 2.11 39.43 2.69
4793 8201 2.355197 CCCGCATGAACAGTACATTCA 58.645 47.619 13.19 13.19 40.25 2.57
4794 8202 1.064060 GCCCGCATGAACAGTACATTC 59.936 52.381 0.00 0.00 0.00 2.67
4795 8203 1.094785 GCCCGCATGAACAGTACATT 58.905 50.000 0.00 0.00 0.00 2.71
4796 8204 1.089481 CGCCCGCATGAACAGTACAT 61.089 55.000 0.00 0.00 0.00 2.29
4797 8205 1.739929 CGCCCGCATGAACAGTACA 60.740 57.895 0.00 0.00 0.00 2.90
4798 8206 2.461110 CCGCCCGCATGAACAGTAC 61.461 63.158 0.00 0.00 0.00 2.73
4799 8207 2.125310 CCGCCCGCATGAACAGTA 60.125 61.111 0.00 0.00 0.00 2.74
4814 8222 2.869503 ATAGTTCGCACAAGGCCCCG 62.870 60.000 0.00 0.00 40.31 5.73
4815 8223 1.077716 ATAGTTCGCACAAGGCCCC 60.078 57.895 0.00 0.00 40.31 5.80
4816 8224 0.676782 ACATAGTTCGCACAAGGCCC 60.677 55.000 0.00 0.00 40.31 5.80
4817 8225 1.135689 CAACATAGTTCGCACAAGGCC 60.136 52.381 0.00 0.00 40.31 5.19
4818 8226 1.535462 ACAACATAGTTCGCACAAGGC 59.465 47.619 0.00 0.00 39.90 4.35
4819 8227 3.810373 GAACAACATAGTTCGCACAAGG 58.190 45.455 0.00 0.00 38.58 3.61
4827 8235 4.514066 ACCAACCTTCGAACAACATAGTTC 59.486 41.667 0.00 0.00 43.39 3.01
4828 8236 4.457466 ACCAACCTTCGAACAACATAGTT 58.543 39.130 0.00 0.00 0.00 2.24
4829 8237 4.081322 ACCAACCTTCGAACAACATAGT 57.919 40.909 0.00 0.00 0.00 2.12
4830 8238 5.432885 AAACCAACCTTCGAACAACATAG 57.567 39.130 0.00 0.00 0.00 2.23
4831 8239 5.450688 CCAAAACCAACCTTCGAACAACATA 60.451 40.000 0.00 0.00 0.00 2.29
4832 8240 4.429108 CAAAACCAACCTTCGAACAACAT 58.571 39.130 0.00 0.00 0.00 2.71
4833 8241 3.367498 CCAAAACCAACCTTCGAACAACA 60.367 43.478 0.00 0.00 0.00 3.33
4834 8242 3.119424 TCCAAAACCAACCTTCGAACAAC 60.119 43.478 0.00 0.00 0.00 3.32
4835 8243 3.090037 TCCAAAACCAACCTTCGAACAA 58.910 40.909 0.00 0.00 0.00 2.83
4836 8244 2.724454 TCCAAAACCAACCTTCGAACA 58.276 42.857 0.00 0.00 0.00 3.18
4837 8245 3.786516 TTCCAAAACCAACCTTCGAAC 57.213 42.857 0.00 0.00 0.00 3.95
4838 8246 3.131400 CCTTTCCAAAACCAACCTTCGAA 59.869 43.478 0.00 0.00 0.00 3.71
4839 8247 2.691011 CCTTTCCAAAACCAACCTTCGA 59.309 45.455 0.00 0.00 0.00 3.71
4840 8248 2.223947 CCCTTTCCAAAACCAACCTTCG 60.224 50.000 0.00 0.00 0.00 3.79
4841 8249 3.035363 TCCCTTTCCAAAACCAACCTTC 58.965 45.455 0.00 0.00 0.00 3.46
4842 8250 3.038280 CTCCCTTTCCAAAACCAACCTT 58.962 45.455 0.00 0.00 0.00 3.50
4843 8251 2.677914 CTCCCTTTCCAAAACCAACCT 58.322 47.619 0.00 0.00 0.00 3.50
4844 8252 1.691976 CCTCCCTTTCCAAAACCAACC 59.308 52.381 0.00 0.00 0.00 3.77
4845 8253 2.394632 ACCTCCCTTTCCAAAACCAAC 58.605 47.619 0.00 0.00 0.00 3.77
4846 8254 2.858787 ACCTCCCTTTCCAAAACCAA 57.141 45.000 0.00 0.00 0.00 3.67
4847 8255 2.787035 ACTACCTCCCTTTCCAAAACCA 59.213 45.455 0.00 0.00 0.00 3.67
4848 8256 3.520691 ACTACCTCCCTTTCCAAAACC 57.479 47.619 0.00 0.00 0.00 3.27
4849 8257 4.976864 TGTACTACCTCCCTTTCCAAAAC 58.023 43.478 0.00 0.00 0.00 2.43
4850 8258 5.649970 TTGTACTACCTCCCTTTCCAAAA 57.350 39.130 0.00 0.00 0.00 2.44
4851 8259 5.649970 TTTGTACTACCTCCCTTTCCAAA 57.350 39.130 0.00 0.00 0.00 3.28
4852 8260 5.379187 GTTTTGTACTACCTCCCTTTCCAA 58.621 41.667 0.00 0.00 0.00 3.53
4853 8261 4.503643 CGTTTTGTACTACCTCCCTTTCCA 60.504 45.833 0.00 0.00 0.00 3.53
4854 8262 3.999001 CGTTTTGTACTACCTCCCTTTCC 59.001 47.826 0.00 0.00 0.00 3.13
4855 8263 4.886579 TCGTTTTGTACTACCTCCCTTTC 58.113 43.478 0.00 0.00 0.00 2.62
4856 8264 4.961438 TCGTTTTGTACTACCTCCCTTT 57.039 40.909 0.00 0.00 0.00 3.11
4857 8265 4.381292 CGATCGTTTTGTACTACCTCCCTT 60.381 45.833 7.03 0.00 0.00 3.95
4858 8266 3.129988 CGATCGTTTTGTACTACCTCCCT 59.870 47.826 7.03 0.00 0.00 4.20
4859 8267 3.119352 ACGATCGTTTTGTACTACCTCCC 60.119 47.826 16.60 0.00 0.00 4.30
4860 8268 4.102035 ACGATCGTTTTGTACTACCTCC 57.898 45.455 16.60 0.00 0.00 4.30
4861 8269 5.509622 GTGTACGATCGTTTTGTACTACCTC 59.490 44.000 27.88 7.85 43.20 3.85
4862 8270 5.393962 GTGTACGATCGTTTTGTACTACCT 58.606 41.667 27.88 0.00 43.20 3.08
4863 8271 4.260656 CGTGTACGATCGTTTTGTACTACC 59.739 45.833 27.88 9.01 43.20 3.18
4864 8272 4.846137 ACGTGTACGATCGTTTTGTACTAC 59.154 41.667 27.88 15.80 43.20 2.73
4865 8273 4.845598 CACGTGTACGATCGTTTTGTACTA 59.154 41.667 27.88 1.93 43.20 1.82
4866 8274 3.665409 CACGTGTACGATCGTTTTGTACT 59.335 43.478 27.88 0.24 43.20 2.73
4867 8275 3.663564 TCACGTGTACGATCGTTTTGTAC 59.336 43.478 27.88 18.05 43.13 2.90
4868 8276 3.882982 TCACGTGTACGATCGTTTTGTA 58.117 40.909 27.88 4.54 43.02 2.41
4869 8277 2.730069 TCACGTGTACGATCGTTTTGT 58.270 42.857 27.88 16.52 43.02 2.83
4870 8278 3.707179 CTTCACGTGTACGATCGTTTTG 58.293 45.455 27.88 15.87 43.02 2.44
4871 8279 2.154389 GCTTCACGTGTACGATCGTTTT 59.846 45.455 27.88 3.65 43.02 2.43
4872 8280 1.717645 GCTTCACGTGTACGATCGTTT 59.282 47.619 27.88 4.50 43.02 3.60
4873 8281 1.334054 GCTTCACGTGTACGATCGTT 58.666 50.000 27.88 10.70 43.02 3.85
4874 8282 0.239082 TGCTTCACGTGTACGATCGT 59.761 50.000 25.94 25.94 43.02 3.73
4875 8283 1.057285 GTTGCTTCACGTGTACGATCG 59.943 52.381 16.51 14.88 43.02 3.69
4876 8284 2.090658 CAGTTGCTTCACGTGTACGATC 59.909 50.000 16.51 4.13 43.02 3.69
4877 8285 2.058798 CAGTTGCTTCACGTGTACGAT 58.941 47.619 16.51 0.00 43.02 3.73
4878 8286 1.483316 CAGTTGCTTCACGTGTACGA 58.517 50.000 16.51 3.31 43.02 3.43
4879 8287 0.111266 GCAGTTGCTTCACGTGTACG 60.111 55.000 16.51 2.43 40.89 3.67
4880 8288 3.729004 GCAGTTGCTTCACGTGTAC 57.271 52.632 16.51 6.85 38.21 2.90
4897 8305 3.367498 CGGAGGGAGTACATGCTAATAGC 60.367 52.174 5.12 5.12 42.82 2.97
4898 8306 3.827302 ACGGAGGGAGTACATGCTAATAG 59.173 47.826 0.00 0.00 0.00 1.73
4899 8307 3.825014 GACGGAGGGAGTACATGCTAATA 59.175 47.826 0.00 0.00 0.00 0.98
4900 8308 2.628657 GACGGAGGGAGTACATGCTAAT 59.371 50.000 0.00 0.00 0.00 1.73
4901 8309 2.029623 GACGGAGGGAGTACATGCTAA 58.970 52.381 0.00 0.00 0.00 3.09
4902 8310 1.688772 GACGGAGGGAGTACATGCTA 58.311 55.000 0.00 0.00 0.00 3.49
4903 8311 1.043673 GGACGGAGGGAGTACATGCT 61.044 60.000 0.00 0.00 0.00 3.79
4904 8312 1.442148 GGACGGAGGGAGTACATGC 59.558 63.158 0.00 0.00 0.00 4.06
4905 8313 0.686441 TGGGACGGAGGGAGTACATG 60.686 60.000 0.00 0.00 0.00 3.21
4906 8314 0.686769 GTGGGACGGAGGGAGTACAT 60.687 60.000 0.00 0.00 0.00 2.29
4907 8315 1.304713 GTGGGACGGAGGGAGTACA 60.305 63.158 0.00 0.00 0.00 2.90
4908 8316 0.901580 TTGTGGGACGGAGGGAGTAC 60.902 60.000 0.00 0.00 0.00 2.73
4909 8317 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
4910 8318 0.042131 TATTGTGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
4911 8319 0.753262 CTATTGTGGGACGGAGGGAG 59.247 60.000 0.00 0.00 0.00 4.30
4912 8320 0.337082 TCTATTGTGGGACGGAGGGA 59.663 55.000 0.00 0.00 0.00 4.20
4913 8321 1.200519 TTCTATTGTGGGACGGAGGG 58.799 55.000 0.00 0.00 0.00 4.30
4914 8322 3.343941 TTTTCTATTGTGGGACGGAGG 57.656 47.619 0.00 0.00 0.00 4.30
4915 8323 3.555956 CGATTTTCTATTGTGGGACGGAG 59.444 47.826 0.00 0.00 0.00 4.63
4916 8324 3.055675 ACGATTTTCTATTGTGGGACGGA 60.056 43.478 0.00 0.00 0.00 4.69
4917 8325 3.267483 ACGATTTTCTATTGTGGGACGG 58.733 45.455 0.00 0.00 0.00 4.79
4918 8326 4.939509 AACGATTTTCTATTGTGGGACG 57.060 40.909 0.00 0.00 0.00 4.79
4935 8343 8.508875 CCCTTAAGCTAATAGTTTGAAAAACGA 58.491 33.333 0.00 0.00 0.00 3.85
4936 8344 8.294577 ACCCTTAAGCTAATAGTTTGAAAAACG 58.705 33.333 0.00 0.00 0.00 3.60
4940 8348 9.969001 ACATACCCTTAAGCTAATAGTTTGAAA 57.031 29.630 0.00 0.00 0.00 2.69
4941 8349 9.609346 GACATACCCTTAAGCTAATAGTTTGAA 57.391 33.333 0.00 0.00 0.00 2.69
4942 8350 8.764558 TGACATACCCTTAAGCTAATAGTTTGA 58.235 33.333 0.00 0.00 0.00 2.69
4943 8351 8.827677 GTGACATACCCTTAAGCTAATAGTTTG 58.172 37.037 0.00 0.00 0.00 2.93
4944 8352 7.991460 GGTGACATACCCTTAAGCTAATAGTTT 59.009 37.037 0.00 0.00 44.15 2.66
4945 8353 7.506971 GGTGACATACCCTTAAGCTAATAGTT 58.493 38.462 0.00 0.00 44.15 2.24
4946 8354 7.063934 GGTGACATACCCTTAAGCTAATAGT 57.936 40.000 0.00 0.00 44.15 2.12
4960 8368 7.648142 CATTATGTAAATGTGGGTGACATACC 58.352 38.462 0.00 0.00 45.12 2.73
4961 8369 7.138736 GCATTATGTAAATGTGGGTGACATAC 58.861 38.462 0.00 0.00 45.12 2.39
4962 8370 6.830838 TGCATTATGTAAATGTGGGTGACATA 59.169 34.615 0.00 0.00 45.12 2.29
4964 8372 5.012893 TGCATTATGTAAATGTGGGTGACA 58.987 37.500 0.00 0.00 39.53 3.58
4965 8373 5.574891 TGCATTATGTAAATGTGGGTGAC 57.425 39.130 0.00 0.00 0.00 3.67
4966 8374 7.176515 GGATATGCATTATGTAAATGTGGGTGA 59.823 37.037 3.54 0.00 0.00 4.02
4967 8375 7.039853 TGGATATGCATTATGTAAATGTGGGTG 60.040 37.037 3.54 0.00 0.00 4.61
4968 8376 7.009550 TGGATATGCATTATGTAAATGTGGGT 58.990 34.615 3.54 0.00 0.00 4.51
4969 8377 7.465353 TGGATATGCATTATGTAAATGTGGG 57.535 36.000 3.54 0.00 0.00 4.61
4970 8378 9.932207 ATTTGGATATGCATTATGTAAATGTGG 57.068 29.630 3.54 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.