Multiple sequence alignment - TraesCS1D01G352800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G352800 chr1D 100.000 2550 0 0 1 2550 438272926 438275475 0.000000e+00 4710.0
1 TraesCS1D01G352800 chr1D 83.799 358 25 17 1169 1511 438312502 438312841 2.460000e-80 309.0
2 TraesCS1D01G352800 chr1D 86.047 258 18 8 1169 1408 438315251 438315508 7.000000e-66 261.0
3 TraesCS1D01G352800 chr1D 79.894 189 28 7 835 1017 438312129 438312313 2.060000e-26 130.0
4 TraesCS1D01G352800 chr1D 90.000 90 7 1 2460 2547 47936969 47937058 5.770000e-22 115.0
5 TraesCS1D01G352800 chr1D 78.771 179 27 5 835 1003 438284091 438284268 2.680000e-20 110.0
6 TraesCS1D01G352800 chr1D 84.211 76 8 2 156 227 17014987 17014912 1.270000e-08 71.3
7 TraesCS1D01G352800 chr3D 97.230 722 13 3 1835 2550 597242182 597241462 0.000000e+00 1216.0
8 TraesCS1D01G352800 chr3D 92.321 586 25 13 1836 2406 539343626 539344206 0.000000e+00 815.0
9 TraesCS1D01G352800 chr3D 94.790 499 15 5 1835 2323 42904728 42904231 0.000000e+00 767.0
10 TraesCS1D01G352800 chr3D 89.130 138 12 3 234 369 7245816 7245952 4.360000e-38 169.0
11 TraesCS1D01G352800 chr4D 97.083 720 12 3 1836 2550 10476296 10477011 0.000000e+00 1205.0
12 TraesCS1D01G352800 chr4D 90.762 617 26 19 1832 2425 234083617 234083009 0.000000e+00 795.0
13 TraesCS1D01G352800 chr4D 90.820 610 25 19 1833 2419 42116344 42116945 0.000000e+00 787.0
14 TraesCS1D01G352800 chr4D 77.222 180 32 3 583 759 48001013 48001186 2.090000e-16 97.1
15 TraesCS1D01G352800 chr4D 75.648 193 42 4 577 765 54808372 54808563 9.720000e-15 91.6
16 TraesCS1D01G352800 chr2D 91.191 613 26 18 1836 2425 165186502 165185895 0.000000e+00 808.0
17 TraesCS1D01G352800 chr2D 89.781 137 11 3 234 367 347450655 347450791 3.370000e-39 172.0
18 TraesCS1D01G352800 chr2D 95.122 82 3 1 2469 2550 571185372 571185452 7.410000e-26 128.0
19 TraesCS1D01G352800 chr7D 90.982 621 16 17 1835 2419 5026040 5026656 0.000000e+00 800.0
20 TraesCS1D01G352800 chr7D 94.212 501 11 10 1835 2323 8967566 8968060 0.000000e+00 749.0
21 TraesCS1D01G352800 chr7D 90.769 130 11 1 234 362 507792592 507792721 3.370000e-39 172.0
22 TraesCS1D01G352800 chr7D 82.857 105 11 6 127 227 85938719 85938618 1.260000e-13 87.9
23 TraesCS1D01G352800 chr7D 81.553 103 12 6 126 224 435423476 435423575 7.560000e-11 78.7
24 TraesCS1D01G352800 chr1A 85.064 703 58 28 1022 1694 534946360 534947045 0.000000e+00 673.0
25 TraesCS1D01G352800 chr1A 80.078 512 53 30 1163 1658 534955449 534955927 4.070000e-88 335.0
26 TraesCS1D01G352800 chr1A 83.704 270 14 9 1169 1408 534975470 534975739 7.100000e-56 228.0
27 TraesCS1D01G352800 chr1A 83.594 128 13 5 889 1010 534947980 534948105 2.070000e-21 113.0
28 TraesCS1D01G352800 chr1A 95.652 46 2 0 525 570 534975003 534975048 9.780000e-10 75.0
29 TraesCS1D01G352800 chr1B 82.018 773 73 34 1057 1778 593911037 593911794 4.700000e-167 597.0
30 TraesCS1D01G352800 chr1B 88.502 287 18 7 1163 1434 593913856 593914142 1.460000e-87 333.0
31 TraesCS1D01G352800 chr1B 90.000 240 18 2 1169 1405 593917952 593918188 3.190000e-79 305.0
32 TraesCS1D01G352800 chr1B 87.336 229 17 6 1189 1408 593907658 593907883 4.210000e-63 252.0
33 TraesCS1D01G352800 chr1B 77.616 344 36 15 1455 1758 593907977 593908319 1.210000e-38 171.0
34 TraesCS1D01G352800 chr1B 81.347 193 30 5 577 765 620417192 620417382 4.390000e-33 152.0
35 TraesCS1D01G352800 chr1B 81.818 187 26 5 390 569 593910493 593910678 1.580000e-32 150.0
36 TraesCS1D01G352800 chr2A 92.025 163 10 2 2316 2475 41688317 41688155 2.550000e-55 226.0
37 TraesCS1D01G352800 chr2A 90.840 131 10 2 234 362 716224389 716224519 9.380000e-40 174.0
38 TraesCS1D01G352800 chr2A 88.333 60 5 2 165 223 706283754 706283812 1.270000e-08 71.3
39 TraesCS1D01G352800 chr2A 87.755 49 6 0 173 221 578377468 578377516 9.850000e-05 58.4
40 TraesCS1D01G352800 chr3A 74.305 755 89 61 1832 2550 8633576 8634261 3.300000e-54 222.0
41 TraesCS1D01G352800 chr2B 84.375 224 22 7 2326 2538 784627057 784627278 9.250000e-50 207.0
42 TraesCS1D01G352800 chr2B 75.771 227 28 18 2117 2323 187201352 187201571 3.490000e-14 89.8
43 TraesCS1D01G352800 chr3B 80.128 312 27 19 2137 2425 44220376 44220077 1.550000e-47 200.0
44 TraesCS1D01G352800 chr3B 84.146 82 13 0 143 224 779549893 779549812 2.100000e-11 80.5
45 TraesCS1D01G352800 chrUn 93.023 129 9 0 234 362 35732924 35732796 3.350000e-44 189.0
46 TraesCS1D01G352800 chrUn 93.023 129 9 0 234 362 242149387 242149515 3.350000e-44 189.0
47 TraesCS1D01G352800 chrUn 91.538 130 10 1 234 362 381955964 381956093 7.250000e-41 178.0
48 TraesCS1D01G352800 chrUn 80.786 229 15 15 2221 2426 50168797 50168575 4.390000e-33 152.0
49 TraesCS1D01G352800 chrUn 92.683 82 5 1 2469 2550 346456882 346456802 1.600000e-22 117.0
50 TraesCS1D01G352800 chrUn 92.683 82 5 1 2469 2550 347365372 347365452 1.600000e-22 117.0
51 TraesCS1D01G352800 chr4B 91.603 131 9 2 234 362 382202541 382202671 2.020000e-41 180.0
52 TraesCS1D01G352800 chr4B 77.070 157 27 3 599 753 70602698 70602847 5.850000e-12 82.4
53 TraesCS1D01G352800 chr6D 79.779 272 26 16 2176 2425 79156163 79155899 1.210000e-38 171.0
54 TraesCS1D01G352800 chr5D 90.226 133 8 4 234 363 300162025 300161895 4.360000e-38 169.0
55 TraesCS1D01G352800 chr5D 95.890 73 3 0 2470 2542 529039356 529039284 4.460000e-23 119.0
56 TraesCS1D01G352800 chr5D 92.593 81 4 1 2470 2550 514313061 514312983 5.770000e-22 115.0
57 TraesCS1D01G352800 chr7A 84.211 133 17 4 2326 2456 641946689 641946559 2.660000e-25 126.0
58 TraesCS1D01G352800 chr6B 77.473 182 24 11 2154 2323 437467125 437466949 2.700000e-15 93.5
59 TraesCS1D01G352800 chr5A 100.000 34 0 0 2423 2456 350808595 350808628 2.120000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G352800 chr1D 438272926 438275475 2549 False 4710.000000 4710 100.000000 1 2550 1 chr1D.!!$F2 2549
1 TraesCS1D01G352800 chr1D 438312129 438315508 3379 False 233.333333 309 83.246667 835 1511 3 chr1D.!!$F4 676
2 TraesCS1D01G352800 chr3D 597241462 597242182 720 True 1216.000000 1216 97.230000 1835 2550 1 chr3D.!!$R2 715
3 TraesCS1D01G352800 chr3D 539343626 539344206 580 False 815.000000 815 92.321000 1836 2406 1 chr3D.!!$F2 570
4 TraesCS1D01G352800 chr4D 10476296 10477011 715 False 1205.000000 1205 97.083000 1836 2550 1 chr4D.!!$F1 714
5 TraesCS1D01G352800 chr4D 234083009 234083617 608 True 795.000000 795 90.762000 1832 2425 1 chr4D.!!$R1 593
6 TraesCS1D01G352800 chr4D 42116344 42116945 601 False 787.000000 787 90.820000 1833 2419 1 chr4D.!!$F2 586
7 TraesCS1D01G352800 chr2D 165185895 165186502 607 True 808.000000 808 91.191000 1836 2425 1 chr2D.!!$R1 589
8 TraesCS1D01G352800 chr7D 5026040 5026656 616 False 800.000000 800 90.982000 1835 2419 1 chr7D.!!$F1 584
9 TraesCS1D01G352800 chr1A 534946360 534948105 1745 False 393.000000 673 84.329000 889 1694 2 chr1A.!!$F2 805
10 TraesCS1D01G352800 chr1B 593907658 593918188 10530 False 301.333333 597 84.548333 390 1778 6 chr1B.!!$F2 1388
11 TraesCS1D01G352800 chr3A 8633576 8634261 685 False 222.000000 222 74.305000 1832 2550 1 chr3A.!!$F1 718

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
205 206 0.026285 GAACACGCATACGCACATCC 59.974 55.0 0.0 0.0 45.53 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2150 8923 0.459489 GCAGAGGATGAACTCGAGCT 59.541 55.0 13.61 0.0 42.31 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 5.967088 AGCTATATATAACCAACTCAGGCG 58.033 41.667 0.00 0.00 0.00 5.52
33 34 5.715279 AGCTATATATAACCAACTCAGGCGA 59.285 40.000 0.00 0.00 0.00 5.54
34 35 6.210784 AGCTATATATAACCAACTCAGGCGAA 59.789 38.462 0.00 0.00 0.00 4.70
35 36 6.872020 GCTATATATAACCAACTCAGGCGAAA 59.128 38.462 0.00 0.00 0.00 3.46
36 37 7.063544 GCTATATATAACCAACTCAGGCGAAAG 59.936 40.741 0.00 0.00 0.00 2.62
38 39 0.472471 AACCAACTCAGGCGAAAGGA 59.528 50.000 0.00 0.00 0.00 3.36
39 40 0.693049 ACCAACTCAGGCGAAAGGAT 59.307 50.000 0.00 0.00 0.00 3.24
40 41 1.089920 CCAACTCAGGCGAAAGGATG 58.910 55.000 0.00 0.00 0.00 3.51
42 43 0.036732 AACTCAGGCGAAAGGATGCA 59.963 50.000 0.00 0.00 0.00 3.96
43 44 0.392193 ACTCAGGCGAAAGGATGCAG 60.392 55.000 0.00 0.00 0.00 4.41
44 45 1.078214 TCAGGCGAAAGGATGCAGG 60.078 57.895 0.00 0.00 0.00 4.85
45 46 1.377725 CAGGCGAAAGGATGCAGGT 60.378 57.895 0.00 0.00 0.00 4.00
46 47 1.078143 AGGCGAAAGGATGCAGGTC 60.078 57.895 0.00 0.00 0.00 3.85
47 48 2.464459 GGCGAAAGGATGCAGGTCG 61.464 63.158 0.00 0.00 34.89 4.79
49 50 0.459585 GCGAAAGGATGCAGGTCGTA 60.460 55.000 0.00 0.00 34.29 3.43
50 51 1.560923 CGAAAGGATGCAGGTCGTAG 58.439 55.000 0.00 0.00 0.00 3.51
51 52 1.291132 GAAAGGATGCAGGTCGTAGC 58.709 55.000 0.00 0.00 0.00 3.58
52 53 0.613260 AAAGGATGCAGGTCGTAGCA 59.387 50.000 0.00 0.00 45.92 3.49
59 60 3.819564 TGCAGGTCGTAGCATATTCTT 57.180 42.857 0.00 0.00 35.51 2.52
61 62 5.270893 TGCAGGTCGTAGCATATTCTTAA 57.729 39.130 0.00 0.00 35.51 1.85
62 63 5.047847 TGCAGGTCGTAGCATATTCTTAAC 58.952 41.667 0.00 0.00 35.51 2.01
63 64 4.448060 GCAGGTCGTAGCATATTCTTAACC 59.552 45.833 0.00 0.00 0.00 2.85
65 66 4.581824 AGGTCGTAGCATATTCTTAACCGA 59.418 41.667 0.00 0.00 0.00 4.69
66 67 5.243283 AGGTCGTAGCATATTCTTAACCGAT 59.757 40.000 0.00 0.00 0.00 4.18
68 69 6.147581 GTCGTAGCATATTCTTAACCGATGA 58.852 40.000 0.00 0.00 0.00 2.92
69 70 6.807230 GTCGTAGCATATTCTTAACCGATGAT 59.193 38.462 0.00 0.00 0.00 2.45
70 71 7.328737 GTCGTAGCATATTCTTAACCGATGATT 59.671 37.037 0.00 0.00 0.00 2.57
71 72 7.541091 TCGTAGCATATTCTTAACCGATGATTC 59.459 37.037 0.00 0.00 0.00 2.52
73 74 6.223852 AGCATATTCTTAACCGATGATTCGT 58.776 36.000 0.00 0.00 43.97 3.85
74 75 6.146184 AGCATATTCTTAACCGATGATTCGTG 59.854 38.462 0.00 0.00 43.97 4.35
75 76 4.795970 ATTCTTAACCGATGATTCGTGC 57.204 40.909 0.00 0.00 43.97 5.34
77 78 1.924524 CTTAACCGATGATTCGTGCGT 59.075 47.619 0.00 0.00 43.97 5.24
78 79 1.273688 TAACCGATGATTCGTGCGTG 58.726 50.000 0.00 0.00 43.97 5.34
79 80 1.966493 AACCGATGATTCGTGCGTGC 61.966 55.000 0.00 0.00 43.97 5.34
81 82 1.012998 CGATGATTCGTGCGTGCAG 60.013 57.895 0.00 0.00 40.53 4.41
82 83 1.686566 CGATGATTCGTGCGTGCAGT 61.687 55.000 0.00 0.00 40.53 4.40
83 84 0.443869 GATGATTCGTGCGTGCAGTT 59.556 50.000 0.00 0.00 0.00 3.16
84 85 0.166597 ATGATTCGTGCGTGCAGTTG 59.833 50.000 0.00 0.00 0.00 3.16
85 86 0.878086 TGATTCGTGCGTGCAGTTGA 60.878 50.000 0.00 0.00 0.00 3.18
88 89 1.503294 TTCGTGCGTGCAGTTGATTA 58.497 45.000 0.00 0.00 0.00 1.75
89 90 1.503294 TCGTGCGTGCAGTTGATTAA 58.497 45.000 0.00 0.00 0.00 1.40
90 91 2.073056 TCGTGCGTGCAGTTGATTAAT 58.927 42.857 0.00 0.00 0.00 1.40
91 92 2.482336 TCGTGCGTGCAGTTGATTAATT 59.518 40.909 0.00 0.00 0.00 1.40
93 94 3.666638 CGTGCGTGCAGTTGATTAATTGA 60.667 43.478 0.00 0.00 0.00 2.57
94 95 4.414852 GTGCGTGCAGTTGATTAATTGAT 58.585 39.130 0.00 0.00 0.00 2.57
95 96 4.858692 GTGCGTGCAGTTGATTAATTGATT 59.141 37.500 0.00 0.00 0.00 2.57
96 97 6.027131 GTGCGTGCAGTTGATTAATTGATTA 58.973 36.000 0.00 0.00 0.00 1.75
97 98 6.195244 GTGCGTGCAGTTGATTAATTGATTAG 59.805 38.462 0.00 0.00 0.00 1.73
98 99 6.128035 TGCGTGCAGTTGATTAATTGATTAGT 60.128 34.615 0.00 0.00 0.00 2.24
99 100 6.195244 GCGTGCAGTTGATTAATTGATTAGTG 59.805 38.462 0.00 0.00 0.00 2.74
100 101 7.243487 CGTGCAGTTGATTAATTGATTAGTGT 58.757 34.615 0.00 0.00 0.00 3.55
101 102 8.387354 CGTGCAGTTGATTAATTGATTAGTGTA 58.613 33.333 0.00 0.00 0.00 2.90
109 110 9.982291 TGATTAATTGATTAGTGTAAAACGAGC 57.018 29.630 0.00 0.00 0.00 5.03
114 115 9.865321 AATTGATTAGTGTAAAACGAGCTACTA 57.135 29.630 0.00 0.00 0.00 1.82
115 116 8.679288 TTGATTAGTGTAAAACGAGCTACTAC 57.321 34.615 0.00 0.00 0.00 2.73
116 117 8.048534 TGATTAGTGTAAAACGAGCTACTACT 57.951 34.615 0.00 0.00 0.00 2.57
117 118 9.166173 TGATTAGTGTAAAACGAGCTACTACTA 57.834 33.333 0.00 0.00 0.00 1.82
119 120 8.553459 TTAGTGTAAAACGAGCTACTACTAGT 57.447 34.615 0.00 0.00 0.00 2.57
120 121 9.653287 TTAGTGTAAAACGAGCTACTACTAGTA 57.347 33.333 1.89 1.89 0.00 1.82
153 154 7.807687 TTCTTAACATAGTACAGACGAAAGC 57.192 36.000 0.00 0.00 0.00 3.51
154 155 6.916440 TCTTAACATAGTACAGACGAAAGCA 58.084 36.000 0.00 0.00 0.00 3.91
155 156 6.805271 TCTTAACATAGTACAGACGAAAGCAC 59.195 38.462 0.00 0.00 0.00 4.40
156 157 4.785511 ACATAGTACAGACGAAAGCACT 57.214 40.909 0.00 0.00 0.00 4.40
157 158 4.734917 ACATAGTACAGACGAAAGCACTC 58.265 43.478 0.00 0.00 0.00 3.51
158 159 4.217767 ACATAGTACAGACGAAAGCACTCA 59.782 41.667 0.00 0.00 0.00 3.41
159 160 3.944055 AGTACAGACGAAAGCACTCAT 57.056 42.857 0.00 0.00 0.00 2.90
160 161 6.095021 ACATAGTACAGACGAAAGCACTCATA 59.905 38.462 0.00 0.00 0.00 2.15
161 162 4.734917 AGTACAGACGAAAGCACTCATAC 58.265 43.478 0.00 0.00 0.00 2.39
162 163 3.660501 ACAGACGAAAGCACTCATACA 57.339 42.857 0.00 0.00 0.00 2.29
163 164 4.193826 ACAGACGAAAGCACTCATACAT 57.806 40.909 0.00 0.00 0.00 2.29
164 165 5.324784 ACAGACGAAAGCACTCATACATA 57.675 39.130 0.00 0.00 0.00 2.29
167 168 4.103357 GACGAAAGCACTCATACATACGT 58.897 43.478 0.00 0.00 0.00 3.57
169 170 3.857665 CGAAAGCACTCATACATACGTGT 59.142 43.478 0.00 0.00 42.39 4.49
170 171 5.032220 CGAAAGCACTCATACATACGTGTA 58.968 41.667 0.00 0.00 44.43 2.90
171 172 5.052567 CGAAAGCACTCATACATACGTGTAC 60.053 44.000 0.00 0.00 43.21 2.90
172 173 4.976224 AGCACTCATACATACGTGTACA 57.024 40.909 0.00 0.00 43.21 2.90
173 174 4.669318 AGCACTCATACATACGTGTACAC 58.331 43.478 16.32 16.32 43.21 2.90
174 175 4.157105 AGCACTCATACATACGTGTACACA 59.843 41.667 24.98 7.66 43.21 3.72
178 179 5.413523 ACTCATACATACGTGTACACACTCA 59.586 40.000 24.98 7.46 43.21 3.41
179 180 5.633927 TCATACATACGTGTACACACTCAC 58.366 41.667 24.98 0.00 43.21 3.51
180 181 5.413523 TCATACATACGTGTACACACTCACT 59.586 40.000 24.98 5.69 43.21 3.41
181 182 4.156664 ACATACGTGTACACACTCACTC 57.843 45.455 24.98 0.00 44.34 3.51
182 183 3.057736 ACATACGTGTACACACTCACTCC 60.058 47.826 24.98 0.00 44.34 3.85
183 184 1.688772 ACGTGTACACACTCACTCCT 58.311 50.000 24.98 0.00 44.34 3.69
184 185 2.854963 ACGTGTACACACTCACTCCTA 58.145 47.619 24.98 0.00 44.34 2.94
185 186 3.418995 ACGTGTACACACTCACTCCTAT 58.581 45.455 24.98 0.00 44.34 2.57
186 187 3.190744 ACGTGTACACACTCACTCCTATG 59.809 47.826 24.98 6.94 44.34 2.23
187 188 3.439129 CGTGTACACACTCACTCCTATGA 59.561 47.826 24.98 0.00 44.34 2.15
188 189 4.082949 CGTGTACACACTCACTCCTATGAA 60.083 45.833 24.98 0.00 44.34 2.57
189 190 5.162075 GTGTACACACTCACTCCTATGAAC 58.838 45.833 21.14 0.00 43.25 3.18
190 191 4.830600 TGTACACACTCACTCCTATGAACA 59.169 41.667 0.00 0.00 0.00 3.18
191 192 4.258702 ACACACTCACTCCTATGAACAC 57.741 45.455 0.00 0.00 0.00 3.32
192 193 3.245797 CACACTCACTCCTATGAACACG 58.754 50.000 0.00 0.00 0.00 4.49
193 194 2.263077 CACTCACTCCTATGAACACGC 58.737 52.381 0.00 0.00 0.00 5.34
196 197 3.699538 ACTCACTCCTATGAACACGCATA 59.300 43.478 0.00 0.00 0.00 3.14
199 200 1.787155 CTCCTATGAACACGCATACGC 59.213 52.381 0.00 0.00 45.53 4.42
200 201 1.135333 TCCTATGAACACGCATACGCA 59.865 47.619 0.00 0.00 45.53 5.24
202 203 1.923864 CTATGAACACGCATACGCACA 59.076 47.619 0.00 0.00 45.53 4.57
203 204 1.368641 ATGAACACGCATACGCACAT 58.631 45.000 0.00 0.00 45.53 3.21
204 205 0.718904 TGAACACGCATACGCACATC 59.281 50.000 0.00 0.00 45.53 3.06
205 206 0.026285 GAACACGCATACGCACATCC 59.974 55.000 0.00 0.00 45.53 3.51
206 207 0.391130 AACACGCATACGCACATCCT 60.391 50.000 0.00 0.00 45.53 3.24
207 208 0.458260 ACACGCATACGCACATCCTA 59.542 50.000 0.00 0.00 45.53 2.94
208 209 1.068588 ACACGCATACGCACATCCTAT 59.931 47.619 0.00 0.00 45.53 2.57
209 210 1.721389 CACGCATACGCACATCCTATC 59.279 52.381 0.00 0.00 45.53 2.08
210 211 1.336887 ACGCATACGCACATCCTATCC 60.337 52.381 0.00 0.00 45.53 2.59
211 212 1.067565 CGCATACGCACATCCTATCCT 60.068 52.381 0.00 0.00 38.40 3.24
212 213 2.610479 CGCATACGCACATCCTATCCTT 60.610 50.000 0.00 0.00 38.40 3.36
213 214 3.366985 CGCATACGCACATCCTATCCTTA 60.367 47.826 0.00 0.00 38.40 2.69
214 215 4.678044 CGCATACGCACATCCTATCCTTAT 60.678 45.833 0.00 0.00 38.40 1.73
216 217 5.624509 GCATACGCACATCCTATCCTTATGA 60.625 44.000 0.00 0.00 38.36 2.15
217 218 4.527509 ACGCACATCCTATCCTTATGAG 57.472 45.455 0.00 0.00 0.00 2.90
218 219 3.257393 CGCACATCCTATCCTTATGAGC 58.743 50.000 0.00 0.00 34.95 4.26
219 220 3.306294 CGCACATCCTATCCTTATGAGCA 60.306 47.826 0.00 0.00 37.14 4.26
221 222 4.573900 CACATCCTATCCTTATGAGCACC 58.426 47.826 0.00 0.00 0.00 5.01
222 223 4.285517 CACATCCTATCCTTATGAGCACCT 59.714 45.833 0.00 0.00 0.00 4.00
223 224 4.910304 ACATCCTATCCTTATGAGCACCTT 59.090 41.667 0.00 0.00 0.00 3.50
224 225 5.370880 ACATCCTATCCTTATGAGCACCTTT 59.629 40.000 0.00 0.00 0.00 3.11
226 227 7.072454 ACATCCTATCCTTATGAGCACCTTTAA 59.928 37.037 0.00 0.00 0.00 1.52
227 228 6.827727 TCCTATCCTTATGAGCACCTTTAAC 58.172 40.000 0.00 0.00 0.00 2.01
228 229 6.615726 TCCTATCCTTATGAGCACCTTTAACT 59.384 38.462 0.00 0.00 0.00 2.24
229 230 6.931840 CCTATCCTTATGAGCACCTTTAACTC 59.068 42.308 0.00 0.00 0.00 3.01
230 231 5.755409 TCCTTATGAGCACCTTTAACTCA 57.245 39.130 0.00 0.00 44.06 3.41
233 234 5.882557 CCTTATGAGCACCTTTAACTCACAT 59.117 40.000 0.00 0.00 42.83 3.21
234 235 6.037610 CCTTATGAGCACCTTTAACTCACATC 59.962 42.308 0.00 0.00 42.83 3.06
238 239 3.010420 GCACCTTTAACTCACATCCTCC 58.990 50.000 0.00 0.00 0.00 4.30
239 240 3.610911 CACCTTTAACTCACATCCTCCC 58.389 50.000 0.00 0.00 0.00 4.30
240 241 3.009033 CACCTTTAACTCACATCCTCCCA 59.991 47.826 0.00 0.00 0.00 4.37
241 242 3.009143 ACCTTTAACTCACATCCTCCCAC 59.991 47.826 0.00 0.00 0.00 4.61
242 243 3.264450 CCTTTAACTCACATCCTCCCACT 59.736 47.826 0.00 0.00 0.00 4.00
243 244 3.981071 TTAACTCACATCCTCCCACTG 57.019 47.619 0.00 0.00 0.00 3.66
244 245 2.030027 AACTCACATCCTCCCACTGA 57.970 50.000 0.00 0.00 0.00 3.41
245 246 2.030027 ACTCACATCCTCCCACTGAA 57.970 50.000 0.00 0.00 0.00 3.02
246 247 2.338809 ACTCACATCCTCCCACTGAAA 58.661 47.619 0.00 0.00 0.00 2.69
247 248 2.304180 ACTCACATCCTCCCACTGAAAG 59.696 50.000 0.00 0.00 42.29 2.62
248 249 1.003580 TCACATCCTCCCACTGAAAGC 59.996 52.381 0.00 0.00 37.60 3.51
249 250 0.036010 ACATCCTCCCACTGAAAGCG 60.036 55.000 0.00 0.00 37.60 4.68
251 252 1.841302 ATCCTCCCACTGAAAGCGCA 61.841 55.000 11.47 0.00 37.60 6.09
252 253 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
255 256 2.753966 CCCACTGAAAGCGCATCGG 61.754 63.158 11.47 15.30 37.60 4.18
267 268 2.393557 GCATCGGCGAAAATCCTGA 58.606 52.632 15.93 0.00 0.00 3.86
270 271 2.223572 GCATCGGCGAAAATCCTGAAAT 60.224 45.455 15.93 0.00 0.00 2.17
274 275 4.703897 TCGGCGAAAATCCTGAAATAGAT 58.296 39.130 7.35 0.00 0.00 1.98
275 276 5.123227 TCGGCGAAAATCCTGAAATAGATT 58.877 37.500 7.35 0.00 34.18 2.40
276 277 5.236478 TCGGCGAAAATCCTGAAATAGATTC 59.764 40.000 7.35 0.00 38.60 2.52
277 278 5.007626 CGGCGAAAATCCTGAAATAGATTCA 59.992 40.000 0.00 0.00 45.71 2.57
290 291 8.315391 TGAAATAGATTCAGGAATAATGCGAG 57.685 34.615 0.00 0.00 43.08 5.03
291 292 6.734104 AATAGATTCAGGAATAATGCGAGC 57.266 37.500 0.00 0.00 0.00 5.03
292 293 4.077300 AGATTCAGGAATAATGCGAGCA 57.923 40.909 0.00 0.00 0.00 4.26
293 294 4.649692 AGATTCAGGAATAATGCGAGCAT 58.350 39.130 4.52 4.52 38.46 3.79
294 295 4.694509 AGATTCAGGAATAATGCGAGCATC 59.305 41.667 11.26 0.00 35.31 3.91
296 297 3.396560 TCAGGAATAATGCGAGCATCAG 58.603 45.455 11.26 0.00 35.31 2.90
297 298 2.483106 CAGGAATAATGCGAGCATCAGG 59.517 50.000 11.26 0.00 35.31 3.86
298 299 2.369860 AGGAATAATGCGAGCATCAGGA 59.630 45.455 11.26 0.00 35.31 3.86
299 300 3.008813 AGGAATAATGCGAGCATCAGGAT 59.991 43.478 11.26 0.00 35.31 3.24
300 301 3.755378 GGAATAATGCGAGCATCAGGATT 59.245 43.478 11.26 8.63 35.31 3.01
301 302 4.217118 GGAATAATGCGAGCATCAGGATTT 59.783 41.667 11.26 0.00 35.31 2.17
302 303 4.761235 ATAATGCGAGCATCAGGATTTG 57.239 40.909 11.26 0.00 35.31 2.32
303 304 2.336945 ATGCGAGCATCAGGATTTGA 57.663 45.000 4.52 0.00 40.85 2.69
304 305 2.112380 TGCGAGCATCAGGATTTGAA 57.888 45.000 0.00 0.00 39.77 2.69
305 306 1.739466 TGCGAGCATCAGGATTTGAAC 59.261 47.619 0.00 0.00 39.77 3.18
306 307 1.064654 GCGAGCATCAGGATTTGAACC 59.935 52.381 0.00 0.00 39.77 3.62
315 316 0.101219 GGATTTGAACCCTGATGCGC 59.899 55.000 0.00 0.00 0.00 6.09
316 317 1.098050 GATTTGAACCCTGATGCGCT 58.902 50.000 9.73 0.00 0.00 5.92
318 319 1.243342 TTTGAACCCTGATGCGCTGG 61.243 55.000 9.73 5.63 35.50 4.85
323 324 4.368391 CCTGATGCGCTGGGATAC 57.632 61.111 9.73 0.00 32.31 2.24
340 341 4.748701 GGATACCACTATCCCTCTAACCA 58.251 47.826 0.00 0.00 42.06 3.67
342 343 5.422650 GGATACCACTATCCCTCTAACCATC 59.577 48.000 0.00 0.00 42.06 3.51
343 344 3.588569 ACCACTATCCCTCTAACCATCC 58.411 50.000 0.00 0.00 0.00 3.51
344 345 3.051341 ACCACTATCCCTCTAACCATCCA 60.051 47.826 0.00 0.00 0.00 3.41
345 346 3.973973 CCACTATCCCTCTAACCATCCAA 59.026 47.826 0.00 0.00 0.00 3.53
346 347 4.202367 CCACTATCCCTCTAACCATCCAAC 60.202 50.000 0.00 0.00 0.00 3.77
348 349 2.352561 TCCCTCTAACCATCCAACCA 57.647 50.000 0.00 0.00 0.00 3.67
349 350 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
350 351 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
351 352 2.041081 CCCTCTAACCATCCAACCACAA 59.959 50.000 0.00 0.00 0.00 3.33
353 354 3.244911 CCTCTAACCATCCAACCACAAGT 60.245 47.826 0.00 0.00 0.00 3.16
364 365 2.851263 ACCACAAGTTGATTCGCCTA 57.149 45.000 10.54 0.00 0.00 3.93
365 366 2.423577 ACCACAAGTTGATTCGCCTAC 58.576 47.619 10.54 0.00 0.00 3.18
367 368 3.259876 ACCACAAGTTGATTCGCCTACTA 59.740 43.478 10.54 0.00 0.00 1.82
369 370 4.495422 CACAAGTTGATTCGCCTACTAGT 58.505 43.478 10.54 0.00 0.00 2.57
370 371 5.393787 CCACAAGTTGATTCGCCTACTAGTA 60.394 44.000 10.54 1.89 0.00 1.82
371 372 5.744345 CACAAGTTGATTCGCCTACTAGTAG 59.256 44.000 21.11 21.11 0.00 2.57
373 374 6.600822 ACAAGTTGATTCGCCTACTAGTAGTA 59.399 38.462 24.84 9.66 0.00 1.82
375 376 7.025485 AGTTGATTCGCCTACTAGTAGTAAC 57.975 40.000 24.84 16.84 29.00 2.50
376 377 6.039159 AGTTGATTCGCCTACTAGTAGTAACC 59.961 42.308 24.84 10.60 29.00 2.85
377 378 5.439721 TGATTCGCCTACTAGTAGTAACCA 58.560 41.667 24.84 12.70 29.00 3.67
378 379 5.530171 TGATTCGCCTACTAGTAGTAACCAG 59.470 44.000 24.84 11.93 29.00 4.00
379 380 4.494091 TCGCCTACTAGTAGTAACCAGT 57.506 45.455 24.84 0.00 32.09 4.00
381 382 5.989477 TCGCCTACTAGTAGTAACCAGTTA 58.011 41.667 24.84 2.70 29.87 2.24
382 383 5.817816 TCGCCTACTAGTAGTAACCAGTTAC 59.182 44.000 24.84 11.87 44.22 2.50
412 2859 4.675063 AATACCCAGGTTGATTTGGACT 57.325 40.909 0.00 0.00 36.55 3.85
415 2862 3.763057 ACCCAGGTTGATTTGGACTTAC 58.237 45.455 0.00 0.00 36.55 2.34
417 2864 4.202673 ACCCAGGTTGATTTGGACTTACAT 60.203 41.667 0.00 0.00 36.55 2.29
418 2865 4.158394 CCCAGGTTGATTTGGACTTACATG 59.842 45.833 0.00 0.00 36.55 3.21
421 2868 6.828273 CCAGGTTGATTTGGACTTACATGATA 59.172 38.462 0.00 0.00 36.55 2.15
424 2871 7.336931 AGGTTGATTTGGACTTACATGATACAC 59.663 37.037 0.00 0.00 0.00 2.90
425 2872 6.902224 TGATTTGGACTTACATGATACACG 57.098 37.500 0.00 0.00 0.00 4.49
446 2893 2.763249 GTCAGCTGGTTGACAAGTTG 57.237 50.000 15.13 0.00 45.32 3.16
447 2894 1.334869 GTCAGCTGGTTGACAAGTTGG 59.665 52.381 15.13 0.00 45.32 3.77
448 2895 0.031178 CAGCTGGTTGACAAGTTGGC 59.969 55.000 5.57 4.40 0.00 4.52
458 2905 3.937814 TGACAAGTTGGCGATCATAAGT 58.062 40.909 7.96 0.00 0.00 2.24
460 2907 5.483811 TGACAAGTTGGCGATCATAAGTTA 58.516 37.500 7.96 0.00 0.00 2.24
461 2908 5.580691 TGACAAGTTGGCGATCATAAGTTAG 59.419 40.000 7.96 0.00 0.00 2.34
462 2909 5.730550 ACAAGTTGGCGATCATAAGTTAGA 58.269 37.500 7.96 0.00 0.00 2.10
464 2911 6.092259 ACAAGTTGGCGATCATAAGTTAGAAC 59.908 38.462 7.96 0.00 0.00 3.01
465 2912 5.978814 AGTTGGCGATCATAAGTTAGAACT 58.021 37.500 0.00 0.00 42.04 3.01
486 2939 9.672673 AGAACTAGTTAAGTGATTAATGCATGT 57.327 29.630 8.42 0.00 38.88 3.21
501 2954 1.664649 ATGTATGTCATCGCCGGCG 60.665 57.895 42.13 42.13 41.35 6.46
502 2955 3.702555 GTATGTCATCGCCGGCGC 61.703 66.667 42.78 28.81 39.59 6.53
523 2977 3.120718 GCACGGTAACAAAATGCCATTTG 60.121 43.478 2.91 9.13 44.11 2.32
565 3019 2.165167 CCACATGACATGGAGCAAAGT 58.835 47.619 19.39 0.00 39.87 2.66
569 3023 4.637091 CACATGACATGGAGCAAAGTCATA 59.363 41.667 19.39 0.00 46.65 2.15
571 3025 3.609853 TGACATGGAGCAAAGTCATACC 58.390 45.455 0.00 0.00 36.20 2.73
572 3026 3.008923 TGACATGGAGCAAAGTCATACCA 59.991 43.478 0.00 0.00 36.20 3.25
573 3027 3.347216 ACATGGAGCAAAGTCATACCAC 58.653 45.455 0.00 0.00 0.00 4.16
574 3028 2.489938 TGGAGCAAAGTCATACCACC 57.510 50.000 0.00 0.00 0.00 4.61
575 3029 1.985159 TGGAGCAAAGTCATACCACCT 59.015 47.619 0.00 0.00 0.00 4.00
576 3030 2.375174 TGGAGCAAAGTCATACCACCTT 59.625 45.455 0.00 0.00 0.00 3.50
577 3031 3.010420 GGAGCAAAGTCATACCACCTTC 58.990 50.000 0.00 0.00 0.00 3.46
578 3032 3.010420 GAGCAAAGTCATACCACCTTCC 58.990 50.000 0.00 0.00 0.00 3.46
579 3033 2.644798 AGCAAAGTCATACCACCTTCCT 59.355 45.455 0.00 0.00 0.00 3.36
580 3034 3.010420 GCAAAGTCATACCACCTTCCTC 58.990 50.000 0.00 0.00 0.00 3.71
581 3035 3.559171 GCAAAGTCATACCACCTTCCTCA 60.559 47.826 0.00 0.00 0.00 3.86
582 3036 4.848357 CAAAGTCATACCACCTTCCTCAT 58.152 43.478 0.00 0.00 0.00 2.90
583 3037 5.256474 CAAAGTCATACCACCTTCCTCATT 58.744 41.667 0.00 0.00 0.00 2.57
584 3038 5.520748 AAGTCATACCACCTTCCTCATTT 57.479 39.130 0.00 0.00 0.00 2.32
585 3039 4.848357 AGTCATACCACCTTCCTCATTTG 58.152 43.478 0.00 0.00 0.00 2.32
586 3040 4.289672 AGTCATACCACCTTCCTCATTTGT 59.710 41.667 0.00 0.00 0.00 2.83
587 3041 5.010282 GTCATACCACCTTCCTCATTTGTT 58.990 41.667 0.00 0.00 0.00 2.83
588 3042 5.009631 TCATACCACCTTCCTCATTTGTTG 58.990 41.667 0.00 0.00 0.00 3.33
589 3043 2.597455 ACCACCTTCCTCATTTGTTGG 58.403 47.619 0.00 0.00 0.00 3.77
590 3044 2.091333 ACCACCTTCCTCATTTGTTGGT 60.091 45.455 0.00 0.00 0.00 3.67
591 3045 2.558359 CCACCTTCCTCATTTGTTGGTC 59.442 50.000 0.00 0.00 0.00 4.02
592 3046 3.490348 CACCTTCCTCATTTGTTGGTCT 58.510 45.455 0.00 0.00 0.00 3.85
593 3047 3.891366 CACCTTCCTCATTTGTTGGTCTT 59.109 43.478 0.00 0.00 0.00 3.01
594 3048 4.342092 CACCTTCCTCATTTGTTGGTCTTT 59.658 41.667 0.00 0.00 0.00 2.52
595 3049 4.962362 ACCTTCCTCATTTGTTGGTCTTTT 59.038 37.500 0.00 0.00 0.00 2.27
596 3050 5.425217 ACCTTCCTCATTTGTTGGTCTTTTT 59.575 36.000 0.00 0.00 0.00 1.94
597 3051 6.609616 ACCTTCCTCATTTGTTGGTCTTTTTA 59.390 34.615 0.00 0.00 0.00 1.52
598 3052 7.290014 ACCTTCCTCATTTGTTGGTCTTTTTAT 59.710 33.333 0.00 0.00 0.00 1.40
599 3053 8.802267 CCTTCCTCATTTGTTGGTCTTTTTATA 58.198 33.333 0.00 0.00 0.00 0.98
608 3062 9.606631 TTTGTTGGTCTTTTTATATTTTGTGCT 57.393 25.926 0.00 0.00 0.00 4.40
623 3077 7.935338 ATTTTGTGCTAAACTTTGATCACAG 57.065 32.000 7.34 7.34 36.09 3.66
624 3078 6.449635 TTTGTGCTAAACTTTGATCACAGT 57.550 33.333 8.74 8.74 36.09 3.55
625 3079 6.449635 TTGTGCTAAACTTTGATCACAGTT 57.550 33.333 19.27 19.27 36.09 3.16
626 3080 6.449635 TGTGCTAAACTTTGATCACAGTTT 57.550 33.333 31.78 31.78 38.01 2.66
627 3081 6.862209 TGTGCTAAACTTTGATCACAGTTTT 58.138 32.000 33.37 21.74 36.17 2.43
628 3082 7.990917 TGTGCTAAACTTTGATCACAGTTTTA 58.009 30.769 33.37 21.72 36.17 1.52
629 3083 8.462811 TGTGCTAAACTTTGATCACAGTTTTAA 58.537 29.630 33.37 21.10 36.17 1.52
630 3084 8.743099 GTGCTAAACTTTGATCACAGTTTTAAC 58.257 33.333 33.37 25.70 36.17 2.01
631 3085 8.682710 TGCTAAACTTTGATCACAGTTTTAACT 58.317 29.630 33.37 18.62 40.60 2.24
648 3102 8.667463 AGTTTTAACTAAGAAACTGTTAACGCA 58.333 29.630 0.26 0.00 42.67 5.24
649 3103 9.442033 GTTTTAACTAAGAAACTGTTAACGCAT 57.558 29.630 0.26 0.00 36.35 4.73
650 3104 8.996988 TTTAACTAAGAAACTGTTAACGCATG 57.003 30.769 0.26 0.00 36.35 4.06
651 3105 6.613755 AACTAAGAAACTGTTAACGCATGT 57.386 33.333 0.26 0.00 0.00 3.21
652 3106 6.224420 ACTAAGAAACTGTTAACGCATGTC 57.776 37.500 0.26 0.00 0.00 3.06
653 3107 5.756347 ACTAAGAAACTGTTAACGCATGTCA 59.244 36.000 0.26 0.00 0.00 3.58
654 3108 4.468095 AGAAACTGTTAACGCATGTCAC 57.532 40.909 0.26 0.00 0.00 3.67
655 3109 3.874543 AGAAACTGTTAACGCATGTCACA 59.125 39.130 0.26 0.00 0.00 3.58
656 3110 4.334203 AGAAACTGTTAACGCATGTCACAA 59.666 37.500 0.26 0.00 0.00 3.33
657 3111 4.624336 AACTGTTAACGCATGTCACAAA 57.376 36.364 0.26 0.00 0.00 2.83
658 3112 4.624336 ACTGTTAACGCATGTCACAAAA 57.376 36.364 0.26 0.00 0.00 2.44
659 3113 4.987832 ACTGTTAACGCATGTCACAAAAA 58.012 34.783 0.26 0.00 0.00 1.94
683 3137 8.532977 AAACATATAGTTGGATTTGTGTTTGC 57.467 30.769 0.00 0.00 41.19 3.68
684 3138 7.225784 ACATATAGTTGGATTTGTGTTTGCA 57.774 32.000 0.00 0.00 0.00 4.08
685 3139 7.090173 ACATATAGTTGGATTTGTGTTTGCAC 58.910 34.615 0.00 0.00 45.44 4.57
731 3185 9.853555 TTTTCGATGATATGCTAACATTTTGTT 57.146 25.926 0.00 0.00 43.88 2.83
791 3245 9.753674 ACAAAATGAACAGATAAATTAGGAGGA 57.246 29.630 0.00 0.00 0.00 3.71
793 3247 8.986929 AAATGAACAGATAAATTAGGAGGAGG 57.013 34.615 0.00 0.00 0.00 4.30
794 3248 6.500589 TGAACAGATAAATTAGGAGGAGGG 57.499 41.667 0.00 0.00 0.00 4.30
795 3249 5.970640 TGAACAGATAAATTAGGAGGAGGGT 59.029 40.000 0.00 0.00 0.00 4.34
796 3250 7.136885 TGAACAGATAAATTAGGAGGAGGGTA 58.863 38.462 0.00 0.00 0.00 3.69
797 3251 7.626084 TGAACAGATAAATTAGGAGGAGGGTAA 59.374 37.037 0.00 0.00 0.00 2.85
798 3252 8.582891 AACAGATAAATTAGGAGGAGGGTAAT 57.417 34.615 0.00 0.00 0.00 1.89
799 3253 9.684702 AACAGATAAATTAGGAGGAGGGTAATA 57.315 33.333 0.00 0.00 0.00 0.98
810 3264 7.023120 AGGAGGAGGGTAATACTATATTTGCA 58.977 38.462 0.00 0.00 0.00 4.08
817 3271 7.942894 AGGGTAATACTATATTTGCAAGGAACC 59.057 37.037 0.00 0.00 0.00 3.62
818 3272 7.176165 GGGTAATACTATATTTGCAAGGAACCC 59.824 40.741 0.00 0.00 33.15 4.11
825 3279 1.337118 TTGCAAGGAACCCATTGACC 58.663 50.000 0.00 0.00 0.00 4.02
845 3312 5.180492 TGACCATCGCTTTAACAAAACTAGG 59.820 40.000 0.00 0.00 0.00 3.02
849 3316 6.456988 CCATCGCTTTAACAAAACTAGGCTAG 60.457 42.308 19.83 19.83 0.00 3.42
861 3331 2.175811 GGCTAGTTGCGCCGTTTG 59.824 61.111 4.18 0.00 44.05 2.93
863 3333 1.644786 GGCTAGTTGCGCCGTTTGAT 61.645 55.000 4.18 0.00 44.05 2.57
865 3335 1.395608 GCTAGTTGCGCCGTTTGATAA 59.604 47.619 4.18 0.00 0.00 1.75
867 3337 3.486875 GCTAGTTGCGCCGTTTGATAAAT 60.487 43.478 4.18 0.00 0.00 1.40
877 3347 5.220135 CGCCGTTTGATAAATAAACAAAGGC 60.220 40.000 4.03 4.03 40.24 4.35
881 3351 4.379339 TGATAAATAAACAAAGGCGCCC 57.621 40.909 26.15 5.07 0.00 6.13
885 3361 3.359695 AATAAACAAAGGCGCCCTCTA 57.640 42.857 26.15 6.78 30.89 2.43
922 3404 1.555533 GTTGGTCCCGGAGAATTCTCT 59.444 52.381 29.64 0.46 42.48 3.10
931 3413 1.413077 GGAGAATTCTCTACACGGGGG 59.587 57.143 29.64 0.00 42.48 5.40
932 3414 0.831307 AGAATTCTCTACACGGGGGC 59.169 55.000 0.88 0.00 0.00 5.80
933 3415 0.831307 GAATTCTCTACACGGGGGCT 59.169 55.000 0.00 0.00 0.00 5.19
937 3419 1.481871 TCTCTACACGGGGGCTTTAG 58.518 55.000 0.00 0.00 0.00 1.85
948 3430 2.234143 GGGGCTTTAGCTGGAATCATC 58.766 52.381 0.00 0.00 41.70 2.92
1004 3555 1.906253 CCTCTCTGCACCATCAGCT 59.094 57.895 0.00 0.00 34.19 4.24
1008 3559 0.462225 CTCTGCACCATCAGCTCCAG 60.462 60.000 0.00 0.00 34.19 3.86
1010 3561 0.462225 CTGCACCATCAGCTCCAGAG 60.462 60.000 0.00 0.00 0.00 3.35
1032 3588 2.022129 GTCACCAACACGAGCTCCG 61.022 63.158 8.47 6.07 45.44 4.63
1033 3589 3.414700 CACCAACACGAGCTCCGC 61.415 66.667 8.47 0.00 43.32 5.54
1042 3598 1.226831 CGAGCTCCGCTTCTTCCTC 60.227 63.158 8.47 0.00 39.88 3.71
1044 3600 1.608717 GAGCTCCGCTTCTTCCTCCA 61.609 60.000 0.87 0.00 39.88 3.86
1082 3644 3.184683 GAAGCAGAGCAGCGTCGG 61.185 66.667 0.00 0.00 40.15 4.79
1306 3872 2.052779 CCTGGTGCTCAGAGTGTCA 58.947 57.895 8.81 0.00 46.18 3.58
1314 3880 1.527433 CTCAGAGTGTCACCGAGCCA 61.527 60.000 0.00 0.00 0.00 4.75
1315 3881 1.373497 CAGAGTGTCACCGAGCCAC 60.373 63.158 0.00 0.00 0.00 5.01
1317 3883 2.910479 AGTGTCACCGAGCCACGA 60.910 61.111 0.00 0.00 45.77 4.35
1506 6873 2.467673 CGGCTTGAACTTTTTCGCTTTC 59.532 45.455 0.00 0.00 34.04 2.62
1509 6876 3.790789 GCTTGAACTTTTTCGCTTTCGGA 60.791 43.478 0.00 0.00 34.04 4.55
1510 6877 4.537015 CTTGAACTTTTTCGCTTTCGGAT 58.463 39.130 0.00 0.00 34.04 4.18
1513 6880 4.035792 TGAACTTTTTCGCTTTCGGATTGA 59.964 37.500 0.00 0.00 34.04 2.57
1514 6881 3.885358 ACTTTTTCGCTTTCGGATTGAC 58.115 40.909 0.00 0.00 36.13 3.18
1515 6882 3.314080 ACTTTTTCGCTTTCGGATTGACA 59.686 39.130 0.00 0.00 36.13 3.58
1516 6883 4.023193 ACTTTTTCGCTTTCGGATTGACAT 60.023 37.500 0.00 0.00 36.13 3.06
1528 6895 1.174712 ATTGACATGGCATAGGGCGC 61.175 55.000 0.00 0.00 46.16 6.53
1530 6897 3.807631 GACATGGCATAGGGCGCGA 62.808 63.158 12.10 0.00 46.16 5.87
1538 6905 0.518636 CATAGGGCGCGAATGAATGG 59.481 55.000 12.10 0.00 0.00 3.16
1547 6914 1.876156 GCGAATGAATGGATGGTCCTC 59.124 52.381 0.00 0.00 37.46 3.71
1589 6956 1.394697 GCGTGTGTTTGTGCATGTAC 58.605 50.000 7.03 7.03 0.00 2.90
1648 7015 3.758554 AGGTCGGTTGATTCAAGGAAATG 59.241 43.478 0.00 0.00 0.00 2.32
1680 7081 0.803380 GCATGAGCCAAATGTTCCGC 60.803 55.000 0.00 0.00 33.58 5.54
1715 7128 4.585364 CATTGTCGTCTTCTCAATGATGC 58.415 43.478 10.37 0.00 46.20 3.91
1716 7129 3.599730 TGTCGTCTTCTCAATGATGCT 57.400 42.857 0.00 0.00 0.00 3.79
1718 7131 3.928992 TGTCGTCTTCTCAATGATGCTTC 59.071 43.478 0.00 0.00 0.00 3.86
1753 7395 3.119531 CCAATCTTGGCGTAATCTTTGCA 60.120 43.478 0.00 0.00 42.21 4.08
1754 7396 4.484236 CAATCTTGGCGTAATCTTTGCAA 58.516 39.130 0.00 0.00 0.00 4.08
1770 7412 6.946340 TCTTTGCAAGATGAATAGTACTCCA 58.054 36.000 0.00 0.00 31.20 3.86
1773 7415 5.858381 TGCAAGATGAATAGTACTCCATCC 58.142 41.667 20.24 11.53 36.88 3.51
1780 7422 4.960469 TGAATAGTACTCCATCCGTTCCTT 59.040 41.667 0.00 0.00 0.00 3.36
1782 7433 3.103080 AGTACTCCATCCGTTCCTTCT 57.897 47.619 0.00 0.00 0.00 2.85
1787 7438 4.833390 ACTCCATCCGTTCCTTCTTTTAG 58.167 43.478 0.00 0.00 0.00 1.85
1789 7440 5.189934 ACTCCATCCGTTCCTTCTTTTAGAT 59.810 40.000 0.00 0.00 0.00 1.98
1792 7443 7.802117 TCCATCCGTTCCTTCTTTTAGATATT 58.198 34.615 0.00 0.00 0.00 1.28
1793 7444 7.931948 TCCATCCGTTCCTTCTTTTAGATATTC 59.068 37.037 0.00 0.00 0.00 1.75
1809 7460 9.832445 TTTAGATATTCCAATACAGAGTGAACC 57.168 33.333 0.00 0.00 0.00 3.62
1810 7461 7.437713 AGATATTCCAATACAGAGTGAACCA 57.562 36.000 0.00 0.00 0.00 3.67
1811 7462 7.861629 AGATATTCCAATACAGAGTGAACCAA 58.138 34.615 0.00 0.00 0.00 3.67
1812 7463 7.770897 AGATATTCCAATACAGAGTGAACCAAC 59.229 37.037 0.00 0.00 0.00 3.77
1814 7465 2.159627 CCAATACAGAGTGAACCAACGC 59.840 50.000 0.00 0.00 0.00 4.84
1815 7466 3.067106 CAATACAGAGTGAACCAACGCT 58.933 45.455 0.00 0.00 0.00 5.07
1816 7467 2.902705 TACAGAGTGAACCAACGCTT 57.097 45.000 0.00 0.00 0.00 4.68
1817 7468 2.038387 ACAGAGTGAACCAACGCTTT 57.962 45.000 0.00 0.00 0.00 3.51
1818 7469 3.188159 ACAGAGTGAACCAACGCTTTA 57.812 42.857 0.00 0.00 0.00 1.85
1819 7470 3.537580 ACAGAGTGAACCAACGCTTTAA 58.462 40.909 0.00 0.00 0.00 1.52
1820 7471 3.942748 ACAGAGTGAACCAACGCTTTAAA 59.057 39.130 0.00 0.00 0.00 1.52
1822 7473 5.067283 ACAGAGTGAACCAACGCTTTAAAAT 59.933 36.000 0.00 0.00 0.00 1.82
1824 7475 6.577427 CAGAGTGAACCAACGCTTTAAAATAC 59.423 38.462 0.00 0.00 0.00 1.89
1827 7478 5.337773 GTGAACCAACGCTTTAAAATACGTC 59.662 40.000 10.01 1.03 37.87 4.34
2150 8923 4.408821 GCACCACGATGGCCTCCA 62.409 66.667 3.32 0.00 42.67 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.560262 TCGCCTGAGTTGGTTATATATAGCTAT 59.440 37.037 11.77 11.77 0.00 2.97
8 9 6.888088 TCGCCTGAGTTGGTTATATATAGCTA 59.112 38.462 0.00 0.00 0.00 3.32
9 10 5.715279 TCGCCTGAGTTGGTTATATATAGCT 59.285 40.000 6.56 0.00 0.00 3.32
11 12 7.545965 CCTTTCGCCTGAGTTGGTTATATATAG 59.454 40.741 0.00 0.00 0.00 1.31
13 14 6.042781 TCCTTTCGCCTGAGTTGGTTATATAT 59.957 38.462 0.00 0.00 0.00 0.86
14 15 5.364446 TCCTTTCGCCTGAGTTGGTTATATA 59.636 40.000 0.00 0.00 0.00 0.86
15 16 4.163458 TCCTTTCGCCTGAGTTGGTTATAT 59.837 41.667 0.00 0.00 0.00 0.86
16 17 3.516300 TCCTTTCGCCTGAGTTGGTTATA 59.484 43.478 0.00 0.00 0.00 0.98
17 18 2.304761 TCCTTTCGCCTGAGTTGGTTAT 59.695 45.455 0.00 0.00 0.00 1.89
19 20 0.472471 TCCTTTCGCCTGAGTTGGTT 59.528 50.000 0.00 0.00 0.00 3.67
20 21 0.693049 ATCCTTTCGCCTGAGTTGGT 59.307 50.000 0.00 0.00 0.00 3.67
21 22 1.089920 CATCCTTTCGCCTGAGTTGG 58.910 55.000 0.00 0.00 0.00 3.77
23 24 0.036732 TGCATCCTTTCGCCTGAGTT 59.963 50.000 0.00 0.00 0.00 3.01
24 25 0.392193 CTGCATCCTTTCGCCTGAGT 60.392 55.000 0.00 0.00 0.00 3.41
26 27 1.078214 CCTGCATCCTTTCGCCTGA 60.078 57.895 0.00 0.00 0.00 3.86
28 29 1.078143 GACCTGCATCCTTTCGCCT 60.078 57.895 0.00 0.00 0.00 5.52
29 30 2.464459 CGACCTGCATCCTTTCGCC 61.464 63.158 0.00 0.00 0.00 5.54
30 31 0.459585 TACGACCTGCATCCTTTCGC 60.460 55.000 0.00 0.00 32.91 4.70
31 32 1.560923 CTACGACCTGCATCCTTTCG 58.439 55.000 0.00 0.00 35.80 3.46
32 33 1.291132 GCTACGACCTGCATCCTTTC 58.709 55.000 0.00 0.00 0.00 2.62
33 34 0.613260 TGCTACGACCTGCATCCTTT 59.387 50.000 0.00 0.00 33.94 3.11
34 35 0.833287 ATGCTACGACCTGCATCCTT 59.167 50.000 0.00 0.00 45.50 3.36
35 36 1.704641 TATGCTACGACCTGCATCCT 58.295 50.000 3.65 0.00 45.50 3.24
36 37 2.751166 ATATGCTACGACCTGCATCC 57.249 50.000 3.65 0.00 45.50 3.51
39 40 3.819564 AAGAATATGCTACGACCTGCA 57.180 42.857 0.00 0.00 43.67 4.41
40 41 4.448060 GGTTAAGAATATGCTACGACCTGC 59.552 45.833 0.00 0.00 0.00 4.85
42 43 4.581824 TCGGTTAAGAATATGCTACGACCT 59.418 41.667 7.92 0.00 0.00 3.85
43 44 4.863491 TCGGTTAAGAATATGCTACGACC 58.137 43.478 0.00 0.00 0.00 4.79
44 45 6.147581 TCATCGGTTAAGAATATGCTACGAC 58.852 40.000 0.00 0.00 0.00 4.34
45 46 6.321848 TCATCGGTTAAGAATATGCTACGA 57.678 37.500 0.00 3.23 0.00 3.43
46 47 7.461546 CGAATCATCGGTTAAGAATATGCTACG 60.462 40.741 0.00 0.00 45.32 3.51
47 48 7.667283 CGAATCATCGGTTAAGAATATGCTAC 58.333 38.462 0.00 0.00 45.32 3.58
49 50 6.712241 CGAATCATCGGTTAAGAATATGCT 57.288 37.500 0.00 0.00 45.32 3.79
65 66 0.166597 CAACTGCACGCACGAATCAT 59.833 50.000 0.00 0.00 0.00 2.45
66 67 0.878086 TCAACTGCACGCACGAATCA 60.878 50.000 0.00 0.00 0.00 2.57
68 69 0.874390 AATCAACTGCACGCACGAAT 59.126 45.000 0.00 0.00 0.00 3.34
69 70 1.503294 TAATCAACTGCACGCACGAA 58.497 45.000 0.00 0.00 0.00 3.85
70 71 1.503294 TTAATCAACTGCACGCACGA 58.497 45.000 0.00 0.00 0.00 4.35
71 72 2.525750 ATTAATCAACTGCACGCACG 57.474 45.000 0.00 0.00 0.00 5.34
73 74 4.700268 ATCAATTAATCAACTGCACGCA 57.300 36.364 0.00 0.00 0.00 5.24
74 75 6.195244 CACTAATCAATTAATCAACTGCACGC 59.805 38.462 0.00 0.00 0.00 5.34
75 76 7.243487 ACACTAATCAATTAATCAACTGCACG 58.757 34.615 0.00 0.00 0.00 5.34
83 84 9.982291 GCTCGTTTTACACTAATCAATTAATCA 57.018 29.630 0.00 0.00 0.00 2.57
88 89 8.773404 AGTAGCTCGTTTTACACTAATCAATT 57.227 30.769 0.00 0.00 0.00 2.32
89 90 9.298774 GTAGTAGCTCGTTTTACACTAATCAAT 57.701 33.333 0.00 0.00 0.00 2.57
90 91 8.517878 AGTAGTAGCTCGTTTTACACTAATCAA 58.482 33.333 0.00 0.00 0.00 2.57
91 92 8.048534 AGTAGTAGCTCGTTTTACACTAATCA 57.951 34.615 0.00 0.00 0.00 2.57
93 94 9.171877 ACTAGTAGTAGCTCGTTTTACACTAAT 57.828 33.333 0.00 0.00 0.00 1.73
94 95 8.553459 ACTAGTAGTAGCTCGTTTTACACTAA 57.447 34.615 0.00 0.00 0.00 2.24
95 96 9.307121 CTACTAGTAGTAGCTCGTTTTACACTA 57.693 37.037 21.48 0.00 41.36 2.74
96 97 8.195617 CTACTAGTAGTAGCTCGTTTTACACT 57.804 38.462 21.48 0.00 41.36 3.55
128 129 7.868922 TGCTTTCGTCTGTACTATGTTAAGAAA 59.131 33.333 0.00 0.00 0.00 2.52
129 130 7.327761 GTGCTTTCGTCTGTACTATGTTAAGAA 59.672 37.037 0.00 0.00 0.00 2.52
130 131 6.805271 GTGCTTTCGTCTGTACTATGTTAAGA 59.195 38.462 0.00 0.00 0.00 2.10
131 132 6.807230 AGTGCTTTCGTCTGTACTATGTTAAG 59.193 38.462 0.00 0.00 0.00 1.85
132 133 6.684686 AGTGCTTTCGTCTGTACTATGTTAA 58.315 36.000 0.00 0.00 0.00 2.01
133 134 6.072342 TGAGTGCTTTCGTCTGTACTATGTTA 60.072 38.462 0.00 0.00 29.71 2.41
134 135 5.135508 AGTGCTTTCGTCTGTACTATGTT 57.864 39.130 0.00 0.00 0.00 2.71
138 139 5.413523 TGTATGAGTGCTTTCGTCTGTACTA 59.586 40.000 0.00 0.00 29.71 1.82
139 140 3.944055 ATGAGTGCTTTCGTCTGTACT 57.056 42.857 0.00 0.00 32.11 2.73
141 142 4.776795 TGTATGAGTGCTTTCGTCTGTA 57.223 40.909 0.00 0.00 0.00 2.74
142 143 3.660501 TGTATGAGTGCTTTCGTCTGT 57.339 42.857 0.00 0.00 0.00 3.41
143 144 4.205181 CGTATGTATGAGTGCTTTCGTCTG 59.795 45.833 0.00 0.00 0.00 3.51
144 145 4.142447 ACGTATGTATGAGTGCTTTCGTCT 60.142 41.667 0.00 0.00 0.00 4.18
145 146 4.027621 CACGTATGTATGAGTGCTTTCGTC 60.028 45.833 0.00 0.00 0.00 4.20
146 147 3.857665 CACGTATGTATGAGTGCTTTCGT 59.142 43.478 0.00 0.00 0.00 3.85
147 148 3.857665 ACACGTATGTATGAGTGCTTTCG 59.142 43.478 0.00 0.00 37.26 3.46
148 149 5.803461 TGTACACGTATGTATGAGTGCTTTC 59.197 40.000 0.00 0.00 43.21 2.62
151 152 4.157105 TGTGTACACGTATGTATGAGTGCT 59.843 41.667 20.61 0.00 43.21 4.40
153 154 5.926894 GTGTGTACACGTATGTATGAGTG 57.073 43.478 20.61 0.00 43.21 3.51
167 168 4.830600 TGTTCATAGGAGTGAGTGTGTACA 59.169 41.667 0.00 0.00 0.00 2.90
169 170 4.082949 CGTGTTCATAGGAGTGAGTGTGTA 60.083 45.833 0.00 0.00 0.00 2.90
170 171 3.305403 CGTGTTCATAGGAGTGAGTGTGT 60.305 47.826 0.00 0.00 0.00 3.72
171 172 3.245797 CGTGTTCATAGGAGTGAGTGTG 58.754 50.000 0.00 0.00 0.00 3.82
172 173 2.352814 GCGTGTTCATAGGAGTGAGTGT 60.353 50.000 0.00 0.00 0.00 3.55
173 174 2.263077 GCGTGTTCATAGGAGTGAGTG 58.737 52.381 0.00 0.00 0.00 3.51
174 175 1.893137 TGCGTGTTCATAGGAGTGAGT 59.107 47.619 0.00 0.00 0.00 3.41
178 179 2.798499 GCGTATGCGTGTTCATAGGAGT 60.798 50.000 4.81 0.00 37.12 3.85
179 180 1.787155 GCGTATGCGTGTTCATAGGAG 59.213 52.381 4.81 0.00 37.12 3.69
180 181 1.847818 GCGTATGCGTGTTCATAGGA 58.152 50.000 4.81 0.00 37.12 2.94
192 193 2.751166 AGGATAGGATGTGCGTATGC 57.249 50.000 0.00 0.00 43.20 3.14
193 194 5.965922 TCATAAGGATAGGATGTGCGTATG 58.034 41.667 0.00 0.00 33.22 2.39
196 197 3.306364 GCTCATAAGGATAGGATGTGCGT 60.306 47.826 0.00 0.00 32.41 5.24
199 200 4.285517 AGGTGCTCATAAGGATAGGATGTG 59.714 45.833 0.00 0.00 0.00 3.21
200 201 4.497516 AGGTGCTCATAAGGATAGGATGT 58.502 43.478 0.00 0.00 0.00 3.06
202 203 7.293535 AGTTAAAGGTGCTCATAAGGATAGGAT 59.706 37.037 0.00 0.00 0.00 3.24
203 204 6.615726 AGTTAAAGGTGCTCATAAGGATAGGA 59.384 38.462 0.00 0.00 0.00 2.94
204 205 6.831976 AGTTAAAGGTGCTCATAAGGATAGG 58.168 40.000 0.00 0.00 0.00 2.57
205 206 7.439655 GTGAGTTAAAGGTGCTCATAAGGATAG 59.560 40.741 0.00 0.00 40.72 2.08
206 207 7.093068 TGTGAGTTAAAGGTGCTCATAAGGATA 60.093 37.037 0.00 0.00 40.72 2.59
207 208 6.116126 GTGAGTTAAAGGTGCTCATAAGGAT 58.884 40.000 0.00 0.00 40.72 3.24
208 209 5.012664 TGTGAGTTAAAGGTGCTCATAAGGA 59.987 40.000 0.00 0.00 40.72 3.36
209 210 5.245531 TGTGAGTTAAAGGTGCTCATAAGG 58.754 41.667 0.00 0.00 40.72 2.69
210 211 6.037610 GGATGTGAGTTAAAGGTGCTCATAAG 59.962 42.308 0.00 0.00 40.72 1.73
211 212 5.880332 GGATGTGAGTTAAAGGTGCTCATAA 59.120 40.000 0.00 0.00 40.72 1.90
212 213 5.189736 AGGATGTGAGTTAAAGGTGCTCATA 59.810 40.000 0.00 0.00 40.72 2.15
213 214 4.018960 AGGATGTGAGTTAAAGGTGCTCAT 60.019 41.667 0.00 0.00 40.72 2.90
214 215 3.327757 AGGATGTGAGTTAAAGGTGCTCA 59.672 43.478 0.00 0.00 36.97 4.26
216 217 3.307762 GGAGGATGTGAGTTAAAGGTGCT 60.308 47.826 0.00 0.00 0.00 4.40
217 218 3.010420 GGAGGATGTGAGTTAAAGGTGC 58.990 50.000 0.00 0.00 0.00 5.01
218 219 3.009033 TGGGAGGATGTGAGTTAAAGGTG 59.991 47.826 0.00 0.00 0.00 4.00
219 220 3.009143 GTGGGAGGATGTGAGTTAAAGGT 59.991 47.826 0.00 0.00 0.00 3.50
221 222 4.020218 TCAGTGGGAGGATGTGAGTTAAAG 60.020 45.833 0.00 0.00 0.00 1.85
222 223 3.907474 TCAGTGGGAGGATGTGAGTTAAA 59.093 43.478 0.00 0.00 0.00 1.52
223 224 3.516586 TCAGTGGGAGGATGTGAGTTAA 58.483 45.455 0.00 0.00 0.00 2.01
224 225 3.184382 TCAGTGGGAGGATGTGAGTTA 57.816 47.619 0.00 0.00 0.00 2.24
226 227 2.030027 TTCAGTGGGAGGATGTGAGT 57.970 50.000 0.00 0.00 0.00 3.41
227 228 2.938756 GCTTTCAGTGGGAGGATGTGAG 60.939 54.545 0.00 0.00 0.00 3.51
228 229 1.003580 GCTTTCAGTGGGAGGATGTGA 59.996 52.381 0.00 0.00 0.00 3.58
229 230 1.457346 GCTTTCAGTGGGAGGATGTG 58.543 55.000 0.00 0.00 0.00 3.21
230 231 0.036010 CGCTTTCAGTGGGAGGATGT 60.036 55.000 0.00 0.00 0.00 3.06
233 234 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
234 235 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
238 239 2.787249 CCGATGCGCTTTCAGTGG 59.213 61.111 9.73 0.00 0.00 4.00
239 240 2.099062 GCCGATGCGCTTTCAGTG 59.901 61.111 9.73 0.00 0.00 3.66
249 250 0.732571 TTCAGGATTTTCGCCGATGC 59.267 50.000 0.00 0.00 0.00 3.91
251 252 4.703897 TCTATTTCAGGATTTTCGCCGAT 58.296 39.130 0.00 0.00 0.00 4.18
252 253 4.131649 TCTATTTCAGGATTTTCGCCGA 57.868 40.909 0.00 0.00 0.00 5.54
265 266 7.095060 GCTCGCATTATTCCTGAATCTATTTCA 60.095 37.037 0.00 0.00 42.09 2.69
266 267 7.095060 TGCTCGCATTATTCCTGAATCTATTTC 60.095 37.037 0.00 0.00 34.72 2.17
267 268 6.712095 TGCTCGCATTATTCCTGAATCTATTT 59.288 34.615 0.00 0.00 32.50 1.40
270 271 5.213891 TGCTCGCATTATTCCTGAATCTA 57.786 39.130 0.00 0.00 32.50 1.98
274 275 3.807553 TGATGCTCGCATTATTCCTGAA 58.192 40.909 5.79 0.00 36.70 3.02
275 276 3.396560 CTGATGCTCGCATTATTCCTGA 58.603 45.455 5.79 0.00 36.70 3.86
276 277 2.483106 CCTGATGCTCGCATTATTCCTG 59.517 50.000 5.79 0.00 36.70 3.86
277 278 2.369860 TCCTGATGCTCGCATTATTCCT 59.630 45.455 5.79 0.00 36.70 3.36
278 279 2.771089 TCCTGATGCTCGCATTATTCC 58.229 47.619 5.79 0.00 36.70 3.01
280 281 4.823442 TCAAATCCTGATGCTCGCATTATT 59.177 37.500 5.79 2.29 36.70 1.40
281 282 4.392047 TCAAATCCTGATGCTCGCATTAT 58.608 39.130 5.79 0.00 36.70 1.28
282 283 3.807553 TCAAATCCTGATGCTCGCATTA 58.192 40.909 5.79 0.89 36.70 1.90
283 284 2.646930 TCAAATCCTGATGCTCGCATT 58.353 42.857 5.79 0.00 36.70 3.56
284 285 2.336945 TCAAATCCTGATGCTCGCAT 57.663 45.000 3.70 3.70 39.69 4.73
285 286 1.739466 GTTCAAATCCTGATGCTCGCA 59.261 47.619 0.00 0.00 32.78 5.10
286 287 1.064654 GGTTCAAATCCTGATGCTCGC 59.935 52.381 0.00 0.00 32.78 5.03
287 288 1.672881 GGGTTCAAATCCTGATGCTCG 59.327 52.381 0.00 0.00 32.78 5.03
288 289 3.010200 AGGGTTCAAATCCTGATGCTC 57.990 47.619 0.00 0.00 38.36 4.26
296 297 0.101219 GCGCATCAGGGTTCAAATCC 59.899 55.000 0.30 0.00 0.00 3.01
297 298 1.098050 AGCGCATCAGGGTTCAAATC 58.902 50.000 11.47 0.00 0.00 2.17
298 299 0.813184 CAGCGCATCAGGGTTCAAAT 59.187 50.000 11.47 0.00 0.00 2.32
299 300 1.243342 CCAGCGCATCAGGGTTCAAA 61.243 55.000 11.47 0.00 0.00 2.69
300 301 1.675310 CCAGCGCATCAGGGTTCAA 60.675 57.895 11.47 0.00 0.00 2.69
301 302 2.046023 CCAGCGCATCAGGGTTCA 60.046 61.111 11.47 0.00 0.00 3.18
302 303 2.615227 ATCCCAGCGCATCAGGGTTC 62.615 60.000 21.48 0.00 41.91 3.62
303 304 1.344953 TATCCCAGCGCATCAGGGTT 61.345 55.000 21.48 17.17 41.91 4.11
304 305 1.766059 TATCCCAGCGCATCAGGGT 60.766 57.895 21.48 10.67 41.91 4.34
305 306 1.302033 GTATCCCAGCGCATCAGGG 60.302 63.158 11.47 15.53 42.56 4.45
306 307 1.302033 GGTATCCCAGCGCATCAGG 60.302 63.158 11.47 5.62 0.00 3.86
309 310 0.679505 TAGTGGTATCCCAGCGCATC 59.320 55.000 11.47 0.00 42.94 3.91
310 311 1.276421 GATAGTGGTATCCCAGCGCAT 59.724 52.381 11.47 0.00 42.94 4.73
319 320 5.422650 GGATGGTTAGAGGGATAGTGGTATC 59.577 48.000 0.00 0.00 35.19 2.24
320 321 5.162760 TGGATGGTTAGAGGGATAGTGGTAT 60.163 44.000 0.00 0.00 0.00 2.73
322 323 3.051341 TGGATGGTTAGAGGGATAGTGGT 60.051 47.826 0.00 0.00 0.00 4.16
323 324 3.587498 TGGATGGTTAGAGGGATAGTGG 58.413 50.000 0.00 0.00 0.00 4.00
324 325 4.202367 GGTTGGATGGTTAGAGGGATAGTG 60.202 50.000 0.00 0.00 0.00 2.74
325 326 3.974642 GGTTGGATGGTTAGAGGGATAGT 59.025 47.826 0.00 0.00 0.00 2.12
326 327 3.973973 TGGTTGGATGGTTAGAGGGATAG 59.026 47.826 0.00 0.00 0.00 2.08
328 329 2.509964 GTGGTTGGATGGTTAGAGGGAT 59.490 50.000 0.00 0.00 0.00 3.85
329 330 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
330 331 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
332 333 4.021102 ACTTGTGGTTGGATGGTTAGAG 57.979 45.455 0.00 0.00 0.00 2.43
344 345 1.981256 AGGCGAATCAACTTGTGGTT 58.019 45.000 0.00 0.00 38.93 3.67
345 346 2.038557 AGTAGGCGAATCAACTTGTGGT 59.961 45.455 0.00 0.00 0.00 4.16
346 347 2.699954 AGTAGGCGAATCAACTTGTGG 58.300 47.619 0.00 0.00 0.00 4.17
348 349 4.803098 ACTAGTAGGCGAATCAACTTGT 57.197 40.909 1.45 0.00 0.00 3.16
349 350 5.892568 ACTACTAGTAGGCGAATCAACTTG 58.107 41.667 29.05 4.93 37.49 3.16
350 351 7.416101 GGTTACTACTAGTAGGCGAATCAACTT 60.416 40.741 29.05 9.92 37.49 2.66
351 352 6.039159 GGTTACTACTAGTAGGCGAATCAACT 59.961 42.308 29.05 10.37 37.49 3.16
353 354 5.887598 TGGTTACTACTAGTAGGCGAATCAA 59.112 40.000 29.05 11.37 37.49 2.57
355 356 5.530543 ACTGGTTACTACTAGTAGGCGAATC 59.469 44.000 29.05 20.52 43.41 2.52
356 357 5.444176 ACTGGTTACTACTAGTAGGCGAAT 58.556 41.667 29.05 13.55 43.41 3.34
357 358 4.848357 ACTGGTTACTACTAGTAGGCGAA 58.152 43.478 29.05 18.49 43.41 4.70
358 359 4.494091 ACTGGTTACTACTAGTAGGCGA 57.506 45.455 29.05 16.50 43.41 5.54
370 371 7.283354 GGTATTAGTACCGAGTAACTGGTTACT 59.717 40.741 21.44 21.44 46.68 2.24
371 372 7.418408 GGTATTAGTACCGAGTAACTGGTTAC 58.582 42.308 13.78 13.78 40.95 2.50
373 374 6.456795 GGTATTAGTACCGAGTAACTGGTT 57.543 41.667 0.00 0.00 40.95 3.67
386 387 6.541278 GTCCAAATCAACCTGGGTATTAGTAC 59.459 42.308 0.00 0.00 33.19 2.73
387 388 6.445786 AGTCCAAATCAACCTGGGTATTAGTA 59.554 38.462 0.00 0.00 33.19 1.82
388 389 5.253096 AGTCCAAATCAACCTGGGTATTAGT 59.747 40.000 0.00 0.00 33.19 2.24
389 390 5.755849 AGTCCAAATCAACCTGGGTATTAG 58.244 41.667 0.00 0.00 33.19 1.73
392 393 4.675063 AAGTCCAAATCAACCTGGGTAT 57.325 40.909 0.00 0.00 33.19 2.73
393 394 4.351407 TGTAAGTCCAAATCAACCTGGGTA 59.649 41.667 0.00 0.00 33.19 3.69
394 395 3.139397 TGTAAGTCCAAATCAACCTGGGT 59.861 43.478 0.00 0.00 33.19 4.51
398 2845 7.336931 GTGTATCATGTAAGTCCAAATCAACCT 59.663 37.037 0.00 0.00 0.00 3.50
403 2850 6.757010 ACTCGTGTATCATGTAAGTCCAAATC 59.243 38.462 0.00 0.00 0.00 2.17
412 2859 4.440112 CCAGCTGACTCGTGTATCATGTAA 60.440 45.833 17.39 0.00 0.00 2.41
415 2862 2.159184 ACCAGCTGACTCGTGTATCATG 60.159 50.000 17.39 0.00 0.00 3.07
417 2864 1.545841 ACCAGCTGACTCGTGTATCA 58.454 50.000 17.39 0.00 0.00 2.15
418 2865 2.094700 TCAACCAGCTGACTCGTGTATC 60.095 50.000 17.39 0.00 0.00 2.24
421 2868 0.249489 GTCAACCAGCTGACTCGTGT 60.249 55.000 17.39 0.00 42.11 4.49
424 2871 1.143305 CTTGTCAACCAGCTGACTCG 58.857 55.000 17.39 0.00 45.03 4.18
425 2872 2.246719 ACTTGTCAACCAGCTGACTC 57.753 50.000 17.39 1.44 45.03 3.36
446 2893 9.182933 CTTAACTAGTTCTAACTTATGATCGCC 57.817 37.037 12.39 0.00 40.37 5.54
447 2894 9.733219 ACTTAACTAGTTCTAACTTATGATCGC 57.267 33.333 12.39 0.00 40.37 4.58
460 2907 9.672673 ACATGCATTAATCACTTAACTAGTTCT 57.327 29.630 12.39 0.00 33.85 3.01
474 2927 5.327091 GGCGATGACATACATGCATTAATC 58.673 41.667 0.00 0.00 39.56 1.75
476 2929 3.186205 CGGCGATGACATACATGCATTAA 59.814 43.478 0.00 0.00 39.56 1.40
481 2934 1.862123 CCGGCGATGACATACATGC 59.138 57.895 9.30 0.00 39.56 4.06
501 2954 2.362169 ATGGCATTTTGTTACCGTGC 57.638 45.000 0.00 0.00 35.17 5.34
502 2955 3.431572 CCAAATGGCATTTTGTTACCGTG 59.568 43.478 22.26 8.99 35.30 4.94
504 2957 2.999355 CCCAAATGGCATTTTGTTACCG 59.001 45.455 22.26 9.58 35.30 4.02
561 3015 5.520748 AATGAGGAAGGTGGTATGACTTT 57.479 39.130 0.00 0.00 0.00 2.66
565 3019 4.927267 ACAAATGAGGAAGGTGGTATGA 57.073 40.909 0.00 0.00 0.00 2.15
569 3023 2.091333 ACCAACAAATGAGGAAGGTGGT 60.091 45.455 0.00 0.00 0.00 4.16
571 3025 3.490348 AGACCAACAAATGAGGAAGGTG 58.510 45.455 0.00 0.00 0.00 4.00
572 3026 3.884037 AGACCAACAAATGAGGAAGGT 57.116 42.857 0.00 0.00 0.00 3.50
573 3027 5.535753 AAAAGACCAACAAATGAGGAAGG 57.464 39.130 4.21 0.00 0.00 3.46
582 3036 9.606631 AGCACAAAATATAAAAAGACCAACAAA 57.393 25.926 0.00 0.00 0.00 2.83
597 3051 9.630098 CTGTGATCAAAGTTTAGCACAAAATAT 57.370 29.630 4.56 0.00 36.04 1.28
598 3052 8.629158 ACTGTGATCAAAGTTTAGCACAAAATA 58.371 29.630 13.10 0.00 36.04 1.40
599 3053 7.491682 ACTGTGATCAAAGTTTAGCACAAAAT 58.508 30.769 13.10 0.00 36.04 1.82
600 3054 6.862209 ACTGTGATCAAAGTTTAGCACAAAA 58.138 32.000 13.10 0.00 36.04 2.44
601 3055 6.449635 ACTGTGATCAAAGTTTAGCACAAA 57.550 33.333 13.10 0.00 36.04 2.83
602 3056 6.449635 AACTGTGATCAAAGTTTAGCACAA 57.550 33.333 23.21 4.21 36.04 3.33
603 3057 6.449635 AAACTGTGATCAAAGTTTAGCACA 57.550 33.333 33.28 8.94 43.13 4.57
604 3058 8.743099 GTTAAAACTGTGATCAAAGTTTAGCAC 58.257 33.333 33.98 26.63 43.92 4.40
605 3059 8.682710 AGTTAAAACTGTGATCAAAGTTTAGCA 58.317 29.630 33.98 22.80 43.92 3.49
622 3076 8.667463 TGCGTTAACAGTTTCTTAGTTAAAACT 58.333 29.630 6.39 0.39 44.40 2.66
623 3077 8.825064 TGCGTTAACAGTTTCTTAGTTAAAAC 57.175 30.769 6.39 0.00 38.85 2.43
624 3078 9.440784 CATGCGTTAACAGTTTCTTAGTTAAAA 57.559 29.630 6.39 0.00 38.85 1.52
625 3079 8.614346 ACATGCGTTAACAGTTTCTTAGTTAAA 58.386 29.630 6.39 0.00 38.85 1.52
626 3080 8.145316 ACATGCGTTAACAGTTTCTTAGTTAA 57.855 30.769 6.39 0.00 35.90 2.01
627 3081 7.438757 TGACATGCGTTAACAGTTTCTTAGTTA 59.561 33.333 6.39 0.00 0.00 2.24
628 3082 6.259167 TGACATGCGTTAACAGTTTCTTAGTT 59.741 34.615 6.39 0.00 0.00 2.24
629 3083 5.756347 TGACATGCGTTAACAGTTTCTTAGT 59.244 36.000 6.39 0.00 0.00 2.24
630 3084 6.071463 GTGACATGCGTTAACAGTTTCTTAG 58.929 40.000 6.39 0.00 0.00 2.18
631 3085 5.524281 TGTGACATGCGTTAACAGTTTCTTA 59.476 36.000 6.39 0.00 0.00 2.10
632 3086 4.334203 TGTGACATGCGTTAACAGTTTCTT 59.666 37.500 6.39 0.00 0.00 2.52
633 3087 3.874543 TGTGACATGCGTTAACAGTTTCT 59.125 39.130 6.39 0.00 0.00 2.52
634 3088 4.203950 TGTGACATGCGTTAACAGTTTC 57.796 40.909 6.39 0.00 0.00 2.78
635 3089 4.624336 TTGTGACATGCGTTAACAGTTT 57.376 36.364 6.39 0.00 0.00 2.66
636 3090 4.624336 TTTGTGACATGCGTTAACAGTT 57.376 36.364 6.39 0.00 0.00 3.16
637 3091 4.624336 TTTTGTGACATGCGTTAACAGT 57.376 36.364 6.39 0.00 0.00 3.55
657 3111 8.987890 GCAAACACAAATCCAACTATATGTTTT 58.012 29.630 0.00 0.00 37.02 2.43
658 3112 8.147058 TGCAAACACAAATCCAACTATATGTTT 58.853 29.630 0.00 0.00 39.05 2.83
659 3113 7.598493 GTGCAAACACAAATCCAACTATATGTT 59.402 33.333 0.00 0.00 46.61 2.71
660 3114 7.090173 GTGCAAACACAAATCCAACTATATGT 58.910 34.615 0.00 0.00 46.61 2.29
661 3115 7.510428 GTGCAAACACAAATCCAACTATATG 57.490 36.000 0.00 0.00 46.61 1.78
705 3159 9.853555 AACAAAATGTTAGCATATCATCGAAAA 57.146 25.926 0.00 0.00 39.09 2.29
732 3186 9.995003 TGCCAAATTTTGACATTAGATTTAACT 57.005 25.926 10.72 0.00 0.00 2.24
765 3219 9.753674 TCCTCCTAATTTATCTGTTCATTTTGT 57.246 29.630 0.00 0.00 0.00 2.83
767 3221 9.413734 CCTCCTCCTAATTTATCTGTTCATTTT 57.586 33.333 0.00 0.00 0.00 1.82
768 3222 8.001292 CCCTCCTCCTAATTTATCTGTTCATTT 58.999 37.037 0.00 0.00 0.00 2.32
769 3223 7.129504 ACCCTCCTCCTAATTTATCTGTTCATT 59.870 37.037 0.00 0.00 0.00 2.57
770 3224 6.621514 ACCCTCCTCCTAATTTATCTGTTCAT 59.378 38.462 0.00 0.00 0.00 2.57
771 3225 5.970640 ACCCTCCTCCTAATTTATCTGTTCA 59.029 40.000 0.00 0.00 0.00 3.18
772 3226 6.502074 ACCCTCCTCCTAATTTATCTGTTC 57.498 41.667 0.00 0.00 0.00 3.18
773 3227 8.582891 ATTACCCTCCTCCTAATTTATCTGTT 57.417 34.615 0.00 0.00 0.00 3.16
774 3228 9.102453 GTATTACCCTCCTCCTAATTTATCTGT 57.898 37.037 0.00 0.00 0.00 3.41
775 3229 9.327731 AGTATTACCCTCCTCCTAATTTATCTG 57.672 37.037 0.00 0.00 0.00 2.90
783 3237 9.043548 GCAAATATAGTATTACCCTCCTCCTAA 57.956 37.037 0.00 0.00 0.00 2.69
784 3238 8.181524 TGCAAATATAGTATTACCCTCCTCCTA 58.818 37.037 0.00 0.00 0.00 2.94
785 3239 7.023120 TGCAAATATAGTATTACCCTCCTCCT 58.977 38.462 0.00 0.00 0.00 3.69
786 3240 7.253905 TGCAAATATAGTATTACCCTCCTCC 57.746 40.000 0.00 0.00 0.00 4.30
787 3241 7.824779 CCTTGCAAATATAGTATTACCCTCCTC 59.175 40.741 0.00 0.00 0.00 3.71
788 3242 7.516209 TCCTTGCAAATATAGTATTACCCTCCT 59.484 37.037 0.00 0.00 0.00 3.69
789 3243 7.686434 TCCTTGCAAATATAGTATTACCCTCC 58.314 38.462 0.00 0.00 0.00 4.30
790 3244 9.000486 GTTCCTTGCAAATATAGTATTACCCTC 58.000 37.037 0.00 0.00 0.00 4.30
791 3245 7.942894 GGTTCCTTGCAAATATAGTATTACCCT 59.057 37.037 0.00 0.00 0.00 4.34
792 3246 7.176165 GGGTTCCTTGCAAATATAGTATTACCC 59.824 40.741 0.00 0.00 0.00 3.69
793 3247 7.722285 TGGGTTCCTTGCAAATATAGTATTACC 59.278 37.037 0.00 0.00 0.00 2.85
794 3248 8.685838 TGGGTTCCTTGCAAATATAGTATTAC 57.314 34.615 0.00 0.00 0.00 1.89
795 3249 9.875708 AATGGGTTCCTTGCAAATATAGTATTA 57.124 29.630 0.00 0.00 0.00 0.98
796 3250 8.641541 CAATGGGTTCCTTGCAAATATAGTATT 58.358 33.333 0.00 0.00 0.00 1.89
797 3251 8.004215 TCAATGGGTTCCTTGCAAATATAGTAT 58.996 33.333 0.00 0.00 0.00 2.12
798 3252 7.284489 GTCAATGGGTTCCTTGCAAATATAGTA 59.716 37.037 0.00 0.00 0.00 1.82
799 3253 6.096846 GTCAATGGGTTCCTTGCAAATATAGT 59.903 38.462 0.00 0.00 0.00 2.12
807 3261 0.187117 TGGTCAATGGGTTCCTTGCA 59.813 50.000 0.00 0.00 0.00 4.08
808 3262 1.478105 GATGGTCAATGGGTTCCTTGC 59.522 52.381 0.00 0.00 0.00 4.01
810 3264 1.955208 GCGATGGTCAATGGGTTCCTT 60.955 52.381 0.00 0.00 0.00 3.36
817 3271 4.433186 TTGTTAAAGCGATGGTCAATGG 57.567 40.909 0.00 0.00 0.00 3.16
818 3272 5.920273 AGTTTTGTTAAAGCGATGGTCAATG 59.080 36.000 0.00 0.00 0.00 2.82
825 3279 5.296813 AGCCTAGTTTTGTTAAAGCGATG 57.703 39.130 0.00 0.00 0.00 3.84
845 3312 1.003851 TATCAAACGGCGCAACTAGC 58.996 50.000 10.83 0.00 40.87 3.42
849 3316 4.617645 TGTTTATTTATCAAACGGCGCAAC 59.382 37.500 10.83 0.00 38.46 4.17
860 3330 4.020543 AGGGCGCCTTTGTTTATTTATCA 58.979 39.130 28.56 0.00 0.00 2.15
861 3331 4.338400 AGAGGGCGCCTTTGTTTATTTATC 59.662 41.667 28.56 3.63 31.76 1.75
863 3333 3.692690 AGAGGGCGCCTTTGTTTATTTA 58.307 40.909 28.56 0.00 31.76 1.40
865 3335 2.215942 AGAGGGCGCCTTTGTTTATT 57.784 45.000 28.56 0.45 31.76 1.40
867 3337 1.673626 CGTAGAGGGCGCCTTTGTTTA 60.674 52.381 28.56 7.63 31.76 2.01
909 3385 1.067212 CCCGTGTAGAGAATTCTCCGG 59.933 57.143 29.33 29.33 43.88 5.14
912 3388 1.202545 GCCCCCGTGTAGAGAATTCTC 60.203 57.143 25.20 25.20 43.17 2.87
922 3404 1.600107 CAGCTAAAGCCCCCGTGTA 59.400 57.895 0.00 0.00 43.38 2.90
931 3413 1.265365 GCGGATGATTCCAGCTAAAGC 59.735 52.381 0.00 0.00 42.74 3.51
932 3414 2.547211 CTGCGGATGATTCCAGCTAAAG 59.453 50.000 0.00 0.00 42.74 1.85
933 3415 2.564771 CTGCGGATGATTCCAGCTAAA 58.435 47.619 0.00 0.00 42.74 1.85
937 3419 2.890109 CGCTGCGGATGATTCCAGC 61.890 63.158 15.40 4.65 42.74 4.85
954 3436 3.366476 GCTCGATATATATAGCCCTGCCG 60.366 52.174 6.30 0.00 0.00 5.69
955 3437 3.366476 CGCTCGATATATATAGCCCTGCC 60.366 52.174 10.56 0.00 0.00 4.85
956 3438 3.502595 TCGCTCGATATATATAGCCCTGC 59.497 47.826 10.56 4.06 0.00 4.85
957 3439 4.998033 TCTCGCTCGATATATATAGCCCTG 59.002 45.833 10.56 3.66 0.00 4.45
958 3440 5.230323 TCTCGCTCGATATATATAGCCCT 57.770 43.478 10.56 0.00 0.00 5.19
959 3441 4.142773 GCTCTCGCTCGATATATATAGCCC 60.143 50.000 10.56 0.00 0.00 5.19
960 3442 4.434989 CGCTCTCGCTCGATATATATAGCC 60.435 50.000 10.56 0.00 0.00 3.93
961 3443 4.634000 CGCTCTCGCTCGATATATATAGC 58.366 47.826 7.25 7.25 0.00 2.97
1004 3555 1.053835 TGTTGGTGACCTGCTCTGGA 61.054 55.000 2.11 0.00 0.00 3.86
1008 3559 0.946221 CTCGTGTTGGTGACCTGCTC 60.946 60.000 2.11 0.00 0.00 4.26
1010 3561 2.607892 GCTCGTGTTGGTGACCTGC 61.608 63.158 2.11 0.00 0.00 4.85
1014 3565 2.022129 CGGAGCTCGTGTTGGTGAC 61.022 63.158 7.83 0.00 0.00 3.67
1032 3588 0.739112 CACGAGCTGGAGGAAGAAGC 60.739 60.000 1.44 0.00 37.20 3.86
1033 3589 0.739112 GCACGAGCTGGAGGAAGAAG 60.739 60.000 1.44 0.00 37.91 2.85
1053 3609 2.224606 CTCTGCTTCTGCACTGGAAAA 58.775 47.619 0.00 0.00 45.31 2.29
1054 3610 1.888215 CTCTGCTTCTGCACTGGAAA 58.112 50.000 0.00 0.00 45.31 3.13
1245 3811 4.087892 CACCCTGCTCCTGGTCCG 62.088 72.222 0.00 0.00 30.70 4.79
1246 3812 3.721706 CCACCCTGCTCCTGGTCC 61.722 72.222 0.00 0.00 30.70 4.46
1247 3813 4.416738 GCCACCCTGCTCCTGGTC 62.417 72.222 0.00 0.00 30.70 4.02
1249 3815 3.933048 CTTGCCACCCTGCTCCTGG 62.933 68.421 0.00 0.00 0.00 4.45
1250 3816 2.360852 CTTGCCACCCTGCTCCTG 60.361 66.667 0.00 0.00 0.00 3.86
1261 3827 1.236616 CGAAGTGCATCACCTTGCCA 61.237 55.000 0.00 0.00 42.06 4.92
1349 3924 2.364448 GGCCCTCGAGAACCCTCT 60.364 66.667 15.71 0.00 37.28 3.69
1396 3971 4.430765 AGTTAGTGCCCGACGCCG 62.431 66.667 0.00 0.00 36.24 6.46
1408 3983 2.308866 AGGACCAACCAATCCCAGTTAG 59.691 50.000 0.00 0.00 42.04 2.34
1506 6873 1.527034 CCCTATGCCATGTCAATCCG 58.473 55.000 0.00 0.00 0.00 4.18
1509 6876 1.174712 GCGCCCTATGCCATGTCAAT 61.175 55.000 0.00 0.00 36.24 2.57
1510 6877 1.823470 GCGCCCTATGCCATGTCAA 60.823 57.895 0.00 0.00 36.24 3.18
1513 6880 2.680974 ATTCGCGCCCTATGCCATGT 62.681 55.000 0.00 0.00 36.24 3.21
1514 6881 1.968017 ATTCGCGCCCTATGCCATG 60.968 57.895 0.00 0.00 36.24 3.66
1515 6882 1.968017 CATTCGCGCCCTATGCCAT 60.968 57.895 0.00 0.00 36.24 4.40
1516 6883 2.591429 CATTCGCGCCCTATGCCA 60.591 61.111 0.00 0.00 36.24 4.92
1528 6895 2.498167 GGAGGACCATCCATTCATTCG 58.502 52.381 0.00 0.00 39.61 3.34
1530 6897 2.126882 TCGGAGGACCATCCATTCATT 58.873 47.619 9.73 0.00 39.61 2.57
1538 6905 2.499685 CCCGTTCGGAGGACCATC 59.500 66.667 13.08 0.00 35.59 3.51
1547 6914 3.782443 CCTTCCCTCCCCGTTCGG 61.782 72.222 4.08 4.08 0.00 4.30
1589 6956 3.497278 GCATCACGCAGCTGCTTACAG 62.497 57.143 34.22 21.41 43.42 2.74
1648 7015 1.077123 CTCATGCAGCTGACACTGAC 58.923 55.000 20.43 0.00 40.25 3.51
1672 7073 0.960364 AACAGAATGCCGCGGAACAT 60.960 50.000 33.48 21.30 42.53 2.71
1680 7081 1.621107 GACAATGCAACAGAATGCCG 58.379 50.000 0.00 0.00 45.83 5.69
1750 7392 5.509670 CGGATGGAGTACTATTCATCTTGCA 60.510 44.000 22.00 0.00 36.98 4.08
1751 7393 4.926238 CGGATGGAGTACTATTCATCTTGC 59.074 45.833 22.00 11.87 36.98 4.01
1753 7395 6.239345 GGAACGGATGGAGTACTATTCATCTT 60.239 42.308 22.00 14.67 36.98 2.40
1754 7396 5.244178 GGAACGGATGGAGTACTATTCATCT 59.756 44.000 22.00 10.74 36.98 2.90
1760 7402 4.805744 AGAAGGAACGGATGGAGTACTAT 58.194 43.478 0.00 0.00 0.00 2.12
1769 7411 7.715249 TGGAATATCTAAAAGAAGGAACGGATG 59.285 37.037 0.00 0.00 0.00 3.51
1770 7412 7.802117 TGGAATATCTAAAAGAAGGAACGGAT 58.198 34.615 0.00 0.00 0.00 4.18
1787 7438 7.254455 CGTTGGTTCACTCTGTATTGGAATATC 60.254 40.741 0.00 0.00 0.00 1.63
1789 7440 5.872617 CGTTGGTTCACTCTGTATTGGAATA 59.127 40.000 0.00 0.00 0.00 1.75
1792 7443 3.659786 CGTTGGTTCACTCTGTATTGGA 58.340 45.455 0.00 0.00 0.00 3.53
1793 7444 2.159627 GCGTTGGTTCACTCTGTATTGG 59.840 50.000 0.00 0.00 0.00 3.16
1803 7454 5.207033 ACGTATTTTAAAGCGTTGGTTCAC 58.793 37.500 8.16 0.00 33.54 3.18
1804 7455 5.236911 AGACGTATTTTAAAGCGTTGGTTCA 59.763 36.000 13.11 0.00 37.71 3.18
1805 7456 5.682869 AGACGTATTTTAAAGCGTTGGTTC 58.317 37.500 13.11 4.05 37.71 3.62
1808 7459 9.999883 GTATATAGACGTATTTTAAAGCGTTGG 57.000 33.333 13.11 0.00 37.71 3.77
1811 7462 9.956720 ACAGTATATAGACGTATTTTAAAGCGT 57.043 29.630 12.17 12.17 40.44 5.07
1824 7475 9.221933 AGAGATCAACCTAACAGTATATAGACG 57.778 37.037 0.00 0.00 0.00 4.18
2150 8923 0.459489 GCAGAGGATGAACTCGAGCT 59.541 55.000 13.61 0.00 42.31 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.