Multiple sequence alignment - TraesCS1D01G350400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G350400 chr1D 100.000 3422 0 0 1 3422 436111822 436115243 0.000000e+00 6320.0
1 TraesCS1D01G350400 chr1D 80.178 1236 181 37 1205 2412 436120140 436121339 0.000000e+00 867.0
2 TraesCS1D01G350400 chr1D 91.667 120 8 1 3230 3347 436114888 436115007 7.600000e-37 165.0
3 TraesCS1D01G350400 chr1D 91.667 120 8 1 3067 3186 436115051 436115168 7.600000e-37 165.0
4 TraesCS1D01G350400 chr1D 91.379 58 4 1 605 661 453348421 453348364 1.020000e-10 78.7
5 TraesCS1D01G350400 chr1B 93.979 1827 71 15 807 2620 589976386 589978186 0.000000e+00 2728.0
6 TraesCS1D01G350400 chr1B 81.211 1453 206 40 1001 2412 590091037 590092463 0.000000e+00 1109.0
7 TraesCS1D01G350400 chr1B 89.691 388 27 3 2815 3195 589978381 589978762 1.850000e-132 483.0
8 TraesCS1D01G350400 chr1B 88.636 176 19 1 2624 2799 329341853 329341679 2.680000e-51 213.0
9 TraesCS1D01G350400 chr1B 86.631 187 22 3 2616 2800 23132303 23132488 1.610000e-48 204.0
10 TraesCS1D01G350400 chr1B 94.167 120 5 1 3230 3347 589978634 589978753 7.540000e-42 182.0
11 TraesCS1D01G350400 chr1A 94.438 1780 68 15 854 2621 533323258 533325018 0.000000e+00 2710.0
12 TraesCS1D01G350400 chr1A 80.870 1448 199 40 1001 2412 533409286 533410691 0.000000e+00 1068.0
13 TraesCS1D01G350400 chr1A 90.400 625 33 4 2821 3422 533325217 533325837 0.000000e+00 797.0
14 TraesCS1D01G350400 chr1A 81.379 580 56 18 4 544 533318898 533319464 3.160000e-115 425.0
15 TraesCS1D01G350400 chr1A 95.000 120 4 1 3230 3347 533325459 533325578 1.620000e-43 187.0
16 TraesCS1D01G350400 chr1A 92.126 127 8 1 3067 3193 533325622 533325746 9.760000e-41 178.0
17 TraesCS1D01G350400 chr1A 82.803 157 15 8 712 863 533321374 533321523 2.770000e-26 130.0
18 TraesCS1D01G350400 chr6D 80.439 1411 235 24 1019 2398 417752057 417750657 0.000000e+00 1038.0
19 TraesCS1D01G350400 chr6D 94.231 52 2 1 605 655 23358301 23358352 1.020000e-10 78.7
20 TraesCS1D01G350400 chr6D 94.231 52 2 1 605 655 23372813 23372864 1.020000e-10 78.7
21 TraesCS1D01G350400 chr6A 80.056 1424 243 26 1006 2398 560192871 560191458 0.000000e+00 1018.0
22 TraesCS1D01G350400 chr3D 79.818 1427 252 24 1000 2393 17343131 17341708 0.000000e+00 1007.0
23 TraesCS1D01G350400 chr3D 78.154 1419 274 23 999 2393 17698280 17699686 0.000000e+00 870.0
24 TraesCS1D01G350400 chr3D 91.379 58 4 1 605 661 56308653 56308596 1.020000e-10 78.7
25 TraesCS1D01G350400 chr3D 94.231 52 2 1 605 655 300620565 300620616 1.020000e-10 78.7
26 TraesCS1D01G350400 chr7B 77.862 1450 253 46 998 2411 59078727 59080144 0.000000e+00 837.0
27 TraesCS1D01G350400 chr7B 88.202 178 19 2 2623 2800 432494247 432494422 9.620000e-51 211.0
28 TraesCS1D01G350400 chr7B 71.429 560 134 22 1616 2162 456617646 456618192 1.290000e-24 124.0
29 TraesCS1D01G350400 chr7D 79.855 963 161 20 1466 2411 101780798 101779852 0.000000e+00 673.0
30 TraesCS1D01G350400 chr3B 81.006 795 127 11 1623 2393 24902082 24901288 8.120000e-171 610.0
31 TraesCS1D01G350400 chr5B 73.390 947 195 42 1473 2375 65525885 65524952 2.000000e-77 300.0
32 TraesCS1D01G350400 chr4A 90.449 178 16 1 2623 2800 658107047 658107223 2.050000e-57 233.0
33 TraesCS1D01G350400 chr4A 89.888 178 17 1 2623 2800 658068066 658068242 9.550000e-56 228.0
34 TraesCS1D01G350400 chr4A 89.326 178 18 1 2623 2800 658106664 658106840 4.440000e-54 222.0
35 TraesCS1D01G350400 chr5A 88.889 180 19 1 2621 2799 325200351 325200530 1.600000e-53 220.0
36 TraesCS1D01G350400 chr5A 87.778 180 21 1 2621 2799 467847262 467847441 3.460000e-50 209.0
37 TraesCS1D01G350400 chr4B 90.000 170 17 0 2631 2800 527109349 527109180 1.600000e-53 220.0
38 TraesCS1D01G350400 chr7A 70.693 563 133 28 1616 2162 487749647 487749101 2.810000e-16 97.1
39 TraesCS1D01G350400 chrUn 91.379 58 4 1 605 661 276864238 276864181 1.020000e-10 78.7
40 TraesCS1D01G350400 chrUn 91.379 58 4 1 605 661 276893970 276893913 1.020000e-10 78.7
41 TraesCS1D01G350400 chr5D 91.379 58 4 1 605 661 450523628 450523571 1.020000e-10 78.7
42 TraesCS1D01G350400 chr4D 91.379 58 4 1 605 661 368495256 368495199 1.020000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G350400 chr1D 436111822 436115243 3421 False 2216.666667 6320 94.444667 1 3422 3 chr1D.!!$F2 3421
1 TraesCS1D01G350400 chr1D 436120140 436121339 1199 False 867.000000 867 80.178000 1205 2412 1 chr1D.!!$F1 1207
2 TraesCS1D01G350400 chr1B 589976386 589978762 2376 False 1131.000000 2728 92.612333 807 3347 3 chr1B.!!$F3 2540
3 TraesCS1D01G350400 chr1B 590091037 590092463 1426 False 1109.000000 1109 81.211000 1001 2412 1 chr1B.!!$F2 1411
4 TraesCS1D01G350400 chr1A 533409286 533410691 1405 False 1068.000000 1068 80.870000 1001 2412 1 chr1A.!!$F1 1411
5 TraesCS1D01G350400 chr1A 533318898 533325837 6939 False 737.833333 2710 89.357667 4 3422 6 chr1A.!!$F2 3418
6 TraesCS1D01G350400 chr6D 417750657 417752057 1400 True 1038.000000 1038 80.439000 1019 2398 1 chr6D.!!$R1 1379
7 TraesCS1D01G350400 chr6A 560191458 560192871 1413 True 1018.000000 1018 80.056000 1006 2398 1 chr6A.!!$R1 1392
8 TraesCS1D01G350400 chr3D 17341708 17343131 1423 True 1007.000000 1007 79.818000 1000 2393 1 chr3D.!!$R1 1393
9 TraesCS1D01G350400 chr3D 17698280 17699686 1406 False 870.000000 870 78.154000 999 2393 1 chr3D.!!$F1 1394
10 TraesCS1D01G350400 chr7B 59078727 59080144 1417 False 837.000000 837 77.862000 998 2411 1 chr7B.!!$F1 1413
11 TraesCS1D01G350400 chr7D 101779852 101780798 946 True 673.000000 673 79.855000 1466 2411 1 chr7D.!!$R1 945
12 TraesCS1D01G350400 chr3B 24901288 24902082 794 True 610.000000 610 81.006000 1623 2393 1 chr3B.!!$R1 770
13 TraesCS1D01G350400 chr5B 65524952 65525885 933 True 300.000000 300 73.390000 1473 2375 1 chr5B.!!$R1 902
14 TraesCS1D01G350400 chr4A 658106664 658107223 559 False 227.500000 233 89.887500 2623 2800 2 chr4A.!!$F2 177

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
913 4593 0.240145 TGCTCCGTCACTGAACTACG 59.76 55.0 0.0 0.0 36.42 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2431 6288 0.659427 CTGTATGCATGCCAAGTCCG 59.341 55.0 16.68 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 2.617274 GCAGTTCGACACCCTTGCC 61.617 63.158 0.00 0.00 0.00 4.52
54 55 0.818040 AGTTCGACACCCTTGCCAAC 60.818 55.000 0.00 0.00 0.00 3.77
75 76 1.677552 GAAGGAAGGAACCCGCAGA 59.322 57.895 0.00 0.00 0.00 4.26
114 125 1.404748 GGCTACTGTAGAAGGGTCGAC 59.595 57.143 18.64 7.13 0.00 4.20
136 147 4.994852 ACTTCTCCGAAATTTGATCGTCAA 59.005 37.500 0.00 0.00 38.60 3.18
152 163 7.412063 TGATCGTCAATAGAAATTCTTGCATG 58.588 34.615 0.00 0.00 0.00 4.06
157 174 9.720667 CGTCAATAGAAATTCTTGCATGATTTA 57.279 29.630 0.00 0.00 0.00 1.40
193 210 7.488322 TCATCGTGTATCATGAATCACACTTA 58.512 34.615 24.39 17.29 39.27 2.24
194 211 8.143835 TCATCGTGTATCATGAATCACACTTAT 58.856 33.333 24.39 18.21 39.27 1.73
202 220 2.241176 TGAATCACACTTATCCCCACCC 59.759 50.000 0.00 0.00 0.00 4.61
208 226 1.223487 CTTATCCCCACCCACACCG 59.777 63.158 0.00 0.00 0.00 4.94
210 228 1.268992 TTATCCCCACCCACACCGAG 61.269 60.000 0.00 0.00 0.00 4.63
218 236 0.981183 ACCCACACCGAGATTTGCTA 59.019 50.000 0.00 0.00 0.00 3.49
229 247 4.876107 CCGAGATTTGCTACAACTACCATT 59.124 41.667 0.00 0.00 0.00 3.16
266 286 0.321298 GTTACACAGGGACGTGGCAT 60.321 55.000 0.00 0.00 41.38 4.40
269 289 0.467290 ACACAGGGACGTGGCATTTT 60.467 50.000 0.00 0.00 41.38 1.82
321 341 5.566469 CCACCTTGAAATTAGTGGGTAAGA 58.434 41.667 0.00 0.00 44.95 2.10
322 342 6.007703 CCACCTTGAAATTAGTGGGTAAGAA 58.992 40.000 0.00 0.00 44.95 2.52
324 344 7.309194 CCACCTTGAAATTAGTGGGTAAGAAAG 60.309 40.741 0.00 0.00 44.95 2.62
325 345 6.719829 ACCTTGAAATTAGTGGGTAAGAAAGG 59.280 38.462 0.00 0.00 36.27 3.11
326 346 6.719829 CCTTGAAATTAGTGGGTAAGAAAGGT 59.280 38.462 0.00 0.00 0.00 3.50
327 347 7.232737 CCTTGAAATTAGTGGGTAAGAAAGGTT 59.767 37.037 0.00 0.00 0.00 3.50
328 348 9.292195 CTTGAAATTAGTGGGTAAGAAAGGTTA 57.708 33.333 0.00 0.00 0.00 2.85
329 349 9.643735 TTGAAATTAGTGGGTAAGAAAGGTTAA 57.356 29.630 0.00 0.00 0.00 2.01
330 350 9.643735 TGAAATTAGTGGGTAAGAAAGGTTAAA 57.356 29.630 0.00 0.00 0.00 1.52
337 363 6.827251 GTGGGTAAGAAAGGTTAAATAGGGAG 59.173 42.308 0.00 0.00 0.00 4.30
363 389 7.060403 GCGTAGAAAATGATATGTACGTCTACC 59.940 40.741 0.00 0.00 36.50 3.18
365 391 9.909644 GTAGAAAATGATATGTACGTCTACCAT 57.090 33.333 0.00 0.00 33.29 3.55
373 410 3.075884 TGTACGTCTACCATTTTTGCCC 58.924 45.455 0.00 0.00 0.00 5.36
377 414 2.466846 GTCTACCATTTTTGCCCCCAT 58.533 47.619 0.00 0.00 0.00 4.00
378 415 2.430694 GTCTACCATTTTTGCCCCCATC 59.569 50.000 0.00 0.00 0.00 3.51
401 438 2.457366 CACACAAGGTGTACTCCCTC 57.543 55.000 10.36 0.00 45.65 4.30
402 439 0.966920 ACACAAGGTGTACTCCCTCG 59.033 55.000 10.36 0.00 45.56 4.63
403 440 1.254026 CACAAGGTGTACTCCCTCGA 58.746 55.000 10.36 0.00 0.00 4.04
404 441 1.825474 CACAAGGTGTACTCCCTCGAT 59.175 52.381 10.36 0.00 0.00 3.59
405 442 2.100989 ACAAGGTGTACTCCCTCGATC 58.899 52.381 10.36 0.00 0.00 3.69
406 443 1.409427 CAAGGTGTACTCCCTCGATCC 59.591 57.143 10.36 0.00 0.00 3.36
407 444 0.927767 AGGTGTACTCCCTCGATCCT 59.072 55.000 10.36 0.00 0.00 3.24
408 445 1.288335 AGGTGTACTCCCTCGATCCTT 59.712 52.381 10.36 0.00 0.00 3.36
409 446 2.108970 GGTGTACTCCCTCGATCCTTT 58.891 52.381 2.33 0.00 0.00 3.11
410 447 2.500504 GGTGTACTCCCTCGATCCTTTT 59.499 50.000 2.33 0.00 0.00 2.27
411 448 3.703052 GGTGTACTCCCTCGATCCTTTTA 59.297 47.826 2.33 0.00 0.00 1.52
412 449 4.161001 GGTGTACTCCCTCGATCCTTTTAA 59.839 45.833 2.33 0.00 0.00 1.52
413 450 5.349809 GTGTACTCCCTCGATCCTTTTAAG 58.650 45.833 0.00 0.00 0.00 1.85
414 451 5.126707 GTGTACTCCCTCGATCCTTTTAAGA 59.873 44.000 0.00 0.00 0.00 2.10
415 452 5.360144 TGTACTCCCTCGATCCTTTTAAGAG 59.640 44.000 0.00 0.00 0.00 2.85
416 453 4.354662 ACTCCCTCGATCCTTTTAAGAGT 58.645 43.478 0.00 0.00 0.00 3.24
417 454 5.516984 ACTCCCTCGATCCTTTTAAGAGTA 58.483 41.667 0.00 0.00 30.65 2.59
418 455 6.137559 ACTCCCTCGATCCTTTTAAGAGTAT 58.862 40.000 0.00 0.00 30.65 2.12
419 456 6.041069 ACTCCCTCGATCCTTTTAAGAGTATG 59.959 42.308 0.00 0.00 30.65 2.39
438 475 7.916450 AGAGTATGAACGATAAGCTTTGACTAC 59.084 37.037 3.20 0.00 0.00 2.73
440 477 7.916450 AGTATGAACGATAAGCTTTGACTACTC 59.084 37.037 3.20 0.00 0.00 2.59
446 483 6.374894 ACGATAAGCTTTGACTACTCACTAGT 59.625 38.462 3.20 0.00 38.52 2.57
469 519 7.458397 AGTTCAACTATAGGTGGATTGTTTGA 58.542 34.615 17.73 5.39 0.00 2.69
474 524 6.721318 ACTATAGGTGGATTGTTTGACACAT 58.279 36.000 4.43 0.00 34.43 3.21
479 529 6.048509 AGGTGGATTGTTTGACACATTTTTC 58.951 36.000 0.00 0.00 34.43 2.29
488 538 8.824159 TGTTTGACACATTTTTCTTTCTTTCA 57.176 26.923 0.00 0.00 0.00 2.69
495 545 8.236586 ACACATTTTTCTTTCTTTCAAAAAGGC 58.763 29.630 0.00 0.00 35.31 4.35
503 553 5.413309 TTCTTTCAAAAAGGCCTTTGTCA 57.587 34.783 31.02 10.28 37.52 3.58
505 555 2.861462 TCAAAAAGGCCTTTGTCACG 57.139 45.000 31.02 14.18 37.52 4.35
518 568 5.730568 GCCTTTGTCACGGAATTGATATCAC 60.731 44.000 4.48 0.00 0.00 3.06
533 583 6.515272 TGATATCACTGGAAAAGGCTTTTC 57.485 37.500 34.13 34.13 46.36 2.29
554 2483 1.886542 AGCACGTATCTGCCGATATCA 59.113 47.619 3.12 0.00 37.96 2.15
563 2492 7.095774 ACGTATCTGCCGATATCAATTTTGTAC 60.096 37.037 3.12 0.00 34.79 2.90
564 2493 7.116376 CGTATCTGCCGATATCAATTTTGTACT 59.884 37.037 3.12 0.00 34.79 2.73
565 2494 6.844696 TCTGCCGATATCAATTTTGTACTC 57.155 37.500 3.12 0.00 0.00 2.59
566 2495 5.758296 TCTGCCGATATCAATTTTGTACTCC 59.242 40.000 3.12 0.00 0.00 3.85
567 2496 4.819630 TGCCGATATCAATTTTGTACTCCC 59.180 41.667 3.12 0.00 0.00 4.30
568 2497 5.063880 GCCGATATCAATTTTGTACTCCCT 58.936 41.667 3.12 0.00 0.00 4.20
569 2498 5.179555 GCCGATATCAATTTTGTACTCCCTC 59.820 44.000 3.12 0.00 0.00 4.30
570 2499 6.525629 CCGATATCAATTTTGTACTCCCTCT 58.474 40.000 3.12 0.00 0.00 3.69
571 2500 6.647067 CCGATATCAATTTTGTACTCCCTCTC 59.353 42.308 3.12 0.00 0.00 3.20
572 2501 7.437748 CGATATCAATTTTGTACTCCCTCTCT 58.562 38.462 3.12 0.00 0.00 3.10
573 2502 7.596995 CGATATCAATTTTGTACTCCCTCTCTC 59.403 40.741 3.12 0.00 0.00 3.20
574 2503 5.073311 TCAATTTTGTACTCCCTCTCTCG 57.927 43.478 0.00 0.00 0.00 4.04
575 2504 3.528597 ATTTTGTACTCCCTCTCTCGC 57.471 47.619 0.00 0.00 0.00 5.03
576 2505 1.919240 TTTGTACTCCCTCTCTCGCA 58.081 50.000 0.00 0.00 0.00 5.10
577 2506 2.145397 TTGTACTCCCTCTCTCGCAT 57.855 50.000 0.00 0.00 0.00 4.73
578 2507 3.292492 TTGTACTCCCTCTCTCGCATA 57.708 47.619 0.00 0.00 0.00 3.14
579 2508 2.852449 TGTACTCCCTCTCTCGCATAG 58.148 52.381 0.00 0.00 0.00 2.23
582 2511 1.255882 CTCCCTCTCTCGCATAGCAT 58.744 55.000 0.00 0.00 0.00 3.79
583 2512 2.224892 ACTCCCTCTCTCGCATAGCATA 60.225 50.000 0.00 0.00 0.00 3.14
584 2513 2.822561 CTCCCTCTCTCGCATAGCATAA 59.177 50.000 0.00 0.00 0.00 1.90
585 2514 2.822561 TCCCTCTCTCGCATAGCATAAG 59.177 50.000 0.00 0.00 0.00 1.73
586 2515 2.822561 CCCTCTCTCGCATAGCATAAGA 59.177 50.000 0.00 0.00 0.00 2.10
587 2516 3.366883 CCCTCTCTCGCATAGCATAAGAC 60.367 52.174 0.00 0.00 0.00 3.01
588 2517 3.487536 CTCTCTCGCATAGCATAAGACG 58.512 50.000 0.00 0.00 0.00 4.18
589 2518 2.879026 TCTCTCGCATAGCATAAGACGT 59.121 45.455 0.00 0.00 0.00 4.34
590 2519 3.315470 TCTCTCGCATAGCATAAGACGTT 59.685 43.478 0.00 0.00 0.00 3.99
591 2520 4.514066 TCTCTCGCATAGCATAAGACGTTA 59.486 41.667 0.00 0.00 0.00 3.18
592 2521 5.181433 TCTCTCGCATAGCATAAGACGTTAT 59.819 40.000 0.00 0.00 0.00 1.89
593 2522 5.769367 TCTCGCATAGCATAAGACGTTATT 58.231 37.500 0.00 0.00 0.00 1.40
594 2523 6.905578 TCTCGCATAGCATAAGACGTTATTA 58.094 36.000 0.00 0.00 0.00 0.98
595 2524 7.535997 TCTCGCATAGCATAAGACGTTATTAT 58.464 34.615 0.00 0.00 0.00 1.28
596 2525 8.671028 TCTCGCATAGCATAAGACGTTATTATA 58.329 33.333 6.64 0.00 0.00 0.98
597 2526 9.452065 CTCGCATAGCATAAGACGTTATTATAT 57.548 33.333 6.64 3.13 0.00 0.86
598 2527 9.447040 TCGCATAGCATAAGACGTTATTATATC 57.553 33.333 6.64 3.59 0.00 1.63
599 2528 9.233232 CGCATAGCATAAGACGTTATTATATCA 57.767 33.333 6.64 0.00 0.00 2.15
626 2555 7.372451 TGTGTGAGTATGTTAATAAAGTGGC 57.628 36.000 0.00 0.00 0.00 5.01
627 2556 6.373216 TGTGTGAGTATGTTAATAAAGTGGCC 59.627 38.462 0.00 0.00 0.00 5.36
628 2557 5.583061 TGTGAGTATGTTAATAAAGTGGCCG 59.417 40.000 0.00 0.00 0.00 6.13
629 2558 5.583457 GTGAGTATGTTAATAAAGTGGCCGT 59.417 40.000 0.00 0.00 0.00 5.68
630 2559 6.757947 GTGAGTATGTTAATAAAGTGGCCGTA 59.242 38.462 0.00 0.00 0.00 4.02
631 2560 7.440255 GTGAGTATGTTAATAAAGTGGCCGTAT 59.560 37.037 0.00 0.00 0.00 3.06
632 2561 7.439955 TGAGTATGTTAATAAAGTGGCCGTATG 59.560 37.037 0.00 0.00 0.00 2.39
633 2562 4.886247 TGTTAATAAAGTGGCCGTATGC 57.114 40.909 0.00 0.00 40.16 3.14
634 2563 4.262617 TGTTAATAAAGTGGCCGTATGCA 58.737 39.130 0.00 0.00 43.89 3.96
635 2564 4.884744 TGTTAATAAAGTGGCCGTATGCAT 59.115 37.500 3.79 3.79 43.89 3.96
636 2565 5.008217 TGTTAATAAAGTGGCCGTATGCATC 59.992 40.000 0.19 0.00 43.89 3.91
637 2566 1.577468 TAAAGTGGCCGTATGCATCG 58.423 50.000 0.19 7.03 43.89 3.84
638 2567 1.714899 AAAGTGGCCGTATGCATCGC 61.715 55.000 0.19 3.34 43.89 4.58
639 2568 3.649986 GTGGCCGTATGCATCGCC 61.650 66.667 20.23 20.23 43.89 5.54
640 2569 4.927782 TGGCCGTATGCATCGCCC 62.928 66.667 22.75 16.75 43.89 6.13
641 2570 4.927782 GGCCGTATGCATCGCCCA 62.928 66.667 17.54 0.00 43.89 5.36
642 2571 3.349006 GCCGTATGCATCGCCCAG 61.349 66.667 0.19 0.00 40.77 4.45
643 2572 2.421314 CCGTATGCATCGCCCAGA 59.579 61.111 0.19 0.00 0.00 3.86
644 2573 1.004560 CCGTATGCATCGCCCAGAT 60.005 57.895 0.19 0.00 41.01 2.90
645 2574 0.246360 CCGTATGCATCGCCCAGATA 59.754 55.000 0.19 0.00 37.52 1.98
646 2575 1.350193 CGTATGCATCGCCCAGATAC 58.650 55.000 0.19 0.00 37.52 2.24
647 2576 1.336795 CGTATGCATCGCCCAGATACA 60.337 52.381 0.19 0.00 37.52 2.29
648 2577 2.341257 GTATGCATCGCCCAGATACAG 58.659 52.381 0.19 0.00 36.18 2.74
649 2578 1.051008 ATGCATCGCCCAGATACAGA 58.949 50.000 0.00 0.00 36.18 3.41
650 2579 0.390492 TGCATCGCCCAGATACAGAG 59.610 55.000 0.00 0.00 37.52 3.35
651 2580 0.320247 GCATCGCCCAGATACAGAGG 60.320 60.000 0.00 0.00 37.52 3.69
652 2581 0.320247 CATCGCCCAGATACAGAGGC 60.320 60.000 0.00 0.00 42.18 4.70
653 2582 1.476007 ATCGCCCAGATACAGAGGCC 61.476 60.000 0.00 0.00 42.66 5.19
654 2583 2.423446 GCCCAGATACAGAGGCCG 59.577 66.667 0.00 0.00 39.60 6.13
655 2584 2.134287 GCCCAGATACAGAGGCCGA 61.134 63.158 0.00 0.00 39.60 5.54
656 2585 2.045280 CCCAGATACAGAGGCCGAG 58.955 63.158 0.00 0.00 0.00 4.63
657 2586 0.468214 CCCAGATACAGAGGCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
658 2587 0.958091 CCAGATACAGAGGCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
659 2588 1.686355 CAGATACAGAGGCCGAGAGT 58.314 55.000 0.00 0.00 0.00 3.24
660 2589 1.606668 CAGATACAGAGGCCGAGAGTC 59.393 57.143 0.00 0.00 0.00 3.36
661 2590 1.493022 AGATACAGAGGCCGAGAGTCT 59.507 52.381 0.00 0.00 0.00 3.24
662 2591 2.092103 AGATACAGAGGCCGAGAGTCTT 60.092 50.000 0.00 0.00 0.00 3.01
663 2592 3.136809 AGATACAGAGGCCGAGAGTCTTA 59.863 47.826 0.00 0.00 0.00 2.10
664 2593 2.445682 ACAGAGGCCGAGAGTCTTAT 57.554 50.000 0.00 0.00 0.00 1.73
665 2594 3.579534 ACAGAGGCCGAGAGTCTTATA 57.420 47.619 0.00 0.00 0.00 0.98
666 2595 4.107127 ACAGAGGCCGAGAGTCTTATAT 57.893 45.455 0.00 0.00 0.00 0.86
667 2596 4.475345 ACAGAGGCCGAGAGTCTTATATT 58.525 43.478 0.00 0.00 0.00 1.28
668 2597 5.632118 ACAGAGGCCGAGAGTCTTATATTA 58.368 41.667 0.00 0.00 0.00 0.98
669 2598 6.069331 ACAGAGGCCGAGAGTCTTATATTAA 58.931 40.000 0.00 0.00 0.00 1.40
670 2599 6.550108 ACAGAGGCCGAGAGTCTTATATTAAA 59.450 38.462 0.00 0.00 0.00 1.52
671 2600 7.087639 CAGAGGCCGAGAGTCTTATATTAAAG 58.912 42.308 0.00 0.00 0.00 1.85
672 2601 5.785243 AGGCCGAGAGTCTTATATTAAAGC 58.215 41.667 0.00 0.00 0.00 3.51
673 2602 5.304614 AGGCCGAGAGTCTTATATTAAAGCA 59.695 40.000 0.00 0.00 0.00 3.91
674 2603 5.405873 GGCCGAGAGTCTTATATTAAAGCAC 59.594 44.000 0.00 0.00 0.00 4.40
675 2604 5.983720 GCCGAGAGTCTTATATTAAAGCACA 59.016 40.000 0.00 0.00 0.00 4.57
676 2605 6.479001 GCCGAGAGTCTTATATTAAAGCACAA 59.521 38.462 0.00 0.00 0.00 3.33
677 2606 7.516943 GCCGAGAGTCTTATATTAAAGCACAAC 60.517 40.741 0.00 0.00 0.00 3.32
678 2607 7.306051 CCGAGAGTCTTATATTAAAGCACAACG 60.306 40.741 0.00 0.00 0.00 4.10
679 2608 7.306051 CGAGAGTCTTATATTAAAGCACAACGG 60.306 40.741 0.00 0.00 0.00 4.44
680 2609 6.761714 AGAGTCTTATATTAAAGCACAACGGG 59.238 38.462 0.00 0.00 0.00 5.28
681 2610 6.646267 AGTCTTATATTAAAGCACAACGGGA 58.354 36.000 0.00 0.00 0.00 5.14
682 2611 6.761714 AGTCTTATATTAAAGCACAACGGGAG 59.238 38.462 0.00 0.00 0.00 4.30
684 2613 7.707893 GTCTTATATTAAAGCACAACGGGAGTA 59.292 37.037 0.00 0.00 46.69 2.59
685 2614 8.426489 TCTTATATTAAAGCACAACGGGAGTAT 58.574 33.333 0.00 0.00 46.69 2.12
686 2615 9.701098 CTTATATTAAAGCACAACGGGAGTATA 57.299 33.333 0.00 0.00 46.69 1.47
688 2617 6.861065 ATTAAAGCACAACGGGAGTATATG 57.139 37.500 0.00 0.00 46.69 1.78
689 2618 3.906720 AAGCACAACGGGAGTATATGT 57.093 42.857 0.00 0.00 46.69 2.29
690 2619 5.347620 AAAGCACAACGGGAGTATATGTA 57.652 39.130 0.00 0.00 46.69 2.29
691 2620 5.347620 AAGCACAACGGGAGTATATGTAA 57.652 39.130 0.00 0.00 46.69 2.41
692 2621 5.347620 AGCACAACGGGAGTATATGTAAA 57.652 39.130 0.00 0.00 46.69 2.01
693 2622 5.736813 AGCACAACGGGAGTATATGTAAAA 58.263 37.500 0.00 0.00 46.69 1.52
694 2623 5.583457 AGCACAACGGGAGTATATGTAAAAC 59.417 40.000 0.00 0.00 46.69 2.43
695 2624 5.352016 GCACAACGGGAGTATATGTAAAACA 59.648 40.000 0.00 0.00 46.69 2.83
696 2625 6.037830 GCACAACGGGAGTATATGTAAAACAT 59.962 38.462 0.00 0.00 46.69 2.71
697 2626 7.225145 GCACAACGGGAGTATATGTAAAACATA 59.775 37.037 2.45 2.45 46.69 2.29
698 2627 9.100554 CACAACGGGAGTATATGTAAAACATAA 57.899 33.333 4.02 0.00 42.90 1.90
699 2628 9.841295 ACAACGGGAGTATATGTAAAACATAAT 57.159 29.630 4.02 0.00 42.90 1.28
702 2631 9.199982 ACGGGAGTATATGTAAAACATAATTCG 57.800 33.333 4.02 5.80 44.60 3.34
703 2632 8.166706 CGGGAGTATATGTAAAACATAATTCGC 58.833 37.037 4.02 8.79 43.50 4.70
704 2633 8.995220 GGGAGTATATGTAAAACATAATTCGCA 58.005 33.333 4.02 0.00 43.50 5.10
772 2701 6.452350 CGATACATTTCCGAAAACAAATGCAC 60.452 38.462 0.00 0.00 41.73 4.57
773 2702 4.692228 ACATTTCCGAAAACAAATGCACT 58.308 34.783 0.00 0.00 41.73 4.40
777 2706 8.250332 ACATTTCCGAAAACAAATGCACTATAT 58.750 29.630 0.00 0.00 41.73 0.86
863 2797 4.404640 AGGTCCATATCATTGCTCCATTG 58.595 43.478 0.00 0.00 0.00 2.82
869 4547 7.010738 GTCCATATCATTGCTCCATTGTTTTTG 59.989 37.037 0.00 0.00 0.00 2.44
876 4554 6.992063 TTGCTCCATTGTTTTTGCTTTTTA 57.008 29.167 0.00 0.00 0.00 1.52
885 4564 0.948678 TTTGCTTTTTAGCGCGACCT 59.051 45.000 12.10 0.00 37.69 3.85
893 4572 1.075542 TTAGCGCGACCTTGTCATTG 58.924 50.000 12.10 0.00 32.09 2.82
913 4593 0.240145 TGCTCCGTCACTGAACTACG 59.760 55.000 0.00 0.00 36.42 3.51
915 4595 1.466024 GCTCCGTCACTGAACTACGAG 60.466 57.143 0.00 0.00 38.89 4.18
916 4596 2.074576 CTCCGTCACTGAACTACGAGA 58.925 52.381 0.00 0.00 38.89 4.04
917 4597 1.802960 TCCGTCACTGAACTACGAGAC 59.197 52.381 0.00 0.00 38.89 3.36
937 4620 2.101917 ACGATATTAGGTGAACCCGTGG 59.898 50.000 0.00 0.00 38.74 4.94
1586 5347 1.255667 ACCTACAAGGCGACGGTGAT 61.256 55.000 1.64 0.00 39.63 3.06
1745 5530 4.770874 CGTTGGGGGCGTCGGAAT 62.771 66.667 0.00 0.00 0.00 3.01
1883 5680 2.125912 CGTCGGCCTGGAGAACTG 60.126 66.667 0.00 0.00 0.00 3.16
1928 5779 1.585297 GGAAACCCTTTCAACGACGA 58.415 50.000 0.00 0.00 41.43 4.20
1929 5780 1.262417 GGAAACCCTTTCAACGACGAC 59.738 52.381 0.00 0.00 41.43 4.34
1930 5781 1.262417 GAAACCCTTTCAACGACGACC 59.738 52.381 0.00 0.00 39.45 4.79
1931 5782 0.178533 AACCCTTTCAACGACGACCA 59.821 50.000 0.00 0.00 0.00 4.02
1932 5783 0.249741 ACCCTTTCAACGACGACCAG 60.250 55.000 0.00 0.00 0.00 4.00
1933 5784 0.949105 CCCTTTCAACGACGACCAGG 60.949 60.000 0.00 0.00 0.00 4.45
1934 5785 1.566018 CCTTTCAACGACGACCAGGC 61.566 60.000 0.00 0.00 0.00 4.85
1935 5786 1.566018 CTTTCAACGACGACCAGGCC 61.566 60.000 0.00 0.00 0.00 5.19
1936 5787 2.313051 TTTCAACGACGACCAGGCCA 62.313 55.000 5.01 0.00 0.00 5.36
1937 5788 2.280524 CAACGACGACCAGGCCAA 60.281 61.111 5.01 0.00 0.00 4.52
1938 5789 2.030562 AACGACGACCAGGCCAAG 59.969 61.111 5.01 0.00 0.00 3.61
1939 5790 4.681978 ACGACGACCAGGCCAAGC 62.682 66.667 5.01 0.00 0.00 4.01
1940 5791 4.680237 CGACGACCAGGCCAAGCA 62.680 66.667 5.01 0.00 0.00 3.91
1941 5792 2.743928 GACGACCAGGCCAAGCAG 60.744 66.667 5.01 0.00 0.00 4.24
1942 5793 3.537206 GACGACCAGGCCAAGCAGT 62.537 63.158 5.01 0.00 0.00 4.40
1943 5794 2.281761 CGACCAGGCCAAGCAGTT 60.282 61.111 5.01 0.00 0.00 3.16
1975 5826 2.048127 ACGCTCTCTTGCCGAACC 60.048 61.111 0.00 0.00 0.00 3.62
2091 5942 2.743718 CACTGCGGGTGGAACTCT 59.256 61.111 0.00 0.00 41.90 3.24
2104 5955 2.811542 GAACTCTGTGCTGGAGGGCC 62.812 65.000 0.00 0.00 35.34 5.80
2184 6038 2.597340 CGCATGGTGGGGGAGATT 59.403 61.111 0.00 0.00 0.00 2.40
2276 6130 2.303549 CTGGTCATGGACTCCGAGGC 62.304 65.000 0.00 0.00 32.47 4.70
2431 6288 1.587613 GATCGGTGAGAGTGAGCGC 60.588 63.158 0.00 0.00 34.37 5.92
2453 6310 3.278574 GGACTTGGCATGCATACAGTAA 58.721 45.455 21.36 1.84 0.00 2.24
2474 6331 1.012086 TGCTTCTTGATGCATCTCGC 58.988 50.000 26.32 19.47 42.89 5.03
2594 6451 5.069119 GTGGAGATTCCTGGTTTCTTTTTGT 59.931 40.000 0.00 0.00 37.46 2.83
2610 6469 2.286365 TTGTGTGGTTGGAGATTCCC 57.714 50.000 0.00 0.00 35.03 3.97
2621 6482 4.395959 TGGAGATTCCCGTTGTGTATAC 57.604 45.455 0.00 0.00 35.03 1.47
2632 6493 5.579384 CGTTGTGTATACGGAAACTTTGA 57.421 39.130 11.21 0.00 35.47 2.69
2663 6906 3.508793 GCAAGCATAATGTCCCATAGCAT 59.491 43.478 0.00 0.00 0.00 3.79
2671 6914 2.046292 TGTCCCATAGCATCGGATTCA 58.954 47.619 0.00 0.00 0.00 2.57
2675 6918 4.081420 GTCCCATAGCATCGGATTCACTAT 60.081 45.833 0.00 0.00 0.00 2.12
2679 6922 5.934043 CCATAGCATCGGATTCACTATGAAA 59.066 40.000 22.19 0.00 41.67 2.69
2762 7112 2.351418 TGCGTTCATATTTTCTCTGCCG 59.649 45.455 0.00 0.00 0.00 5.69
2763 7113 2.286418 GCGTTCATATTTTCTCTGCCGG 60.286 50.000 0.00 0.00 0.00 6.13
2765 7115 3.279434 GTTCATATTTTCTCTGCCGGGT 58.721 45.455 2.18 0.00 0.00 5.28
2777 7127 1.909302 CTGCCGGGTATAATCTCCCAT 59.091 52.381 2.18 0.00 43.57 4.00
2819 7169 4.066490 TCCATACAAATTTGTCGGACGTT 58.934 39.130 26.90 8.15 42.35 3.99
2898 7250 4.665451 ACATGATTCCATCTGTGGTTCAA 58.335 39.130 0.00 0.00 46.16 2.69
2899 7251 5.078949 ACATGATTCCATCTGTGGTTCAAA 58.921 37.500 0.00 0.00 46.16 2.69
2942 7294 1.544724 CAACCGTCCATGGGAATTGT 58.455 50.000 13.02 0.00 31.38 2.71
3124 7482 3.252974 GTGTAGGATGACACTCCCTTG 57.747 52.381 0.00 0.00 45.21 3.61
3141 7499 3.127548 CCCTTGTGATGTAGCATGACAAC 59.872 47.826 9.41 0.00 31.83 3.32
3150 7508 5.159273 TGTAGCATGACAACTATTGGACA 57.841 39.130 0.00 0.00 34.12 4.02
3172 7530 6.314018 ACACATATATGACAACTTTTGTGCG 58.686 36.000 19.63 0.00 45.52 5.34
3209 7567 4.167319 TCCCTATATGGTGCATCTTGCTA 58.833 43.478 0.00 0.00 45.31 3.49
3210 7568 4.784838 TCCCTATATGGTGCATCTTGCTAT 59.215 41.667 0.00 0.00 45.31 2.97
3215 7573 1.458639 GGTGCATCTTGCTATGGCCC 61.459 60.000 0.00 0.00 45.31 5.80
3233 7591 3.410508 GCCCTGGAGATGAGATTCATTC 58.589 50.000 0.00 0.00 37.20 2.67
3265 7623 2.234661 ACCATCTCAAGCGAATGACTCA 59.765 45.455 0.00 0.00 0.00 3.41
3296 7654 4.265856 TGACACTCCCCTATGATGTAGT 57.734 45.455 0.00 0.00 0.00 2.73
3317 7675 9.407380 TGTAGTATGACAATTATTGGAAGCATT 57.593 29.630 9.88 0.00 34.12 3.56
3369 7750 1.786937 AAACATGTGGGCAACTTCCA 58.213 45.000 0.00 0.00 0.00 3.53
3385 7766 3.394606 ACTTCCACCTTTTCTTAGCCTGA 59.605 43.478 0.00 0.00 0.00 3.86
3389 7770 3.496870 CCACCTTTTCTTAGCCTGACAGT 60.497 47.826 0.93 0.00 0.00 3.55
3399 7780 0.319728 GCCTGACAGTTCTCTCTGCA 59.680 55.000 0.93 0.00 38.84 4.41
3403 7784 3.461061 CTGACAGTTCTCTCTGCAACAA 58.539 45.455 0.00 0.00 38.84 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.936823 CCTTGGGGCATAGGAGAGT 58.063 57.895 0.00 0.00 33.13 3.24
33 34 2.617274 GGCAAGGGTGTCGAACTGC 61.617 63.158 0.00 0.00 0.00 4.40
37 38 1.890041 CGTTGGCAAGGGTGTCGAA 60.890 57.895 11.94 0.00 29.15 3.71
51 52 0.608308 GGGTTCCTTCCTTCCCGTTG 60.608 60.000 0.00 0.00 0.00 4.10
71 72 2.435059 GGAGACCAAGGCGTCTGC 60.435 66.667 0.00 0.00 43.22 4.26
114 125 5.530519 TTGACGATCAAATTTCGGAGAAG 57.469 39.130 3.31 0.00 40.83 2.85
157 174 8.092687 TCATGATACACGATGATGATGAAGAAT 58.907 33.333 0.00 0.00 33.71 2.40
161 178 7.874016 TGATTCATGATACACGATGATGATGAA 59.126 33.333 0.00 10.44 37.90 2.57
167 184 6.519382 AGTGTGATTCATGATACACGATGAT 58.481 36.000 22.13 10.02 45.90 2.45
168 185 5.906073 AGTGTGATTCATGATACACGATGA 58.094 37.500 22.13 8.56 45.90 2.92
193 210 2.840203 ATCTCGGTGTGGGTGGGGAT 62.840 60.000 0.00 0.00 0.00 3.85
194 211 3.556038 ATCTCGGTGTGGGTGGGGA 62.556 63.158 0.00 0.00 0.00 4.81
202 220 3.067106 AGTTGTAGCAAATCTCGGTGTG 58.933 45.455 0.00 0.00 0.00 3.82
229 247 4.412858 TGTAACCCCCTCAGTCTGTAAAAA 59.587 41.667 0.00 0.00 0.00 1.94
269 289 5.121768 GCGTCCTTGCTAATCTTCACTTAAA 59.878 40.000 0.00 0.00 0.00 1.52
285 305 3.365265 GGTGGGCTTGCGTCCTTG 61.365 66.667 0.00 0.00 35.36 3.61
286 306 3.133365 AAGGTGGGCTTGCGTCCTT 62.133 57.895 8.09 8.09 35.36 3.36
316 336 6.111382 ACGCTCCCTATTTAACCTTTCTTAC 58.889 40.000 0.00 0.00 0.00 2.34
317 337 6.303903 ACGCTCCCTATTTAACCTTTCTTA 57.696 37.500 0.00 0.00 0.00 2.10
318 338 5.175388 ACGCTCCCTATTTAACCTTTCTT 57.825 39.130 0.00 0.00 0.00 2.52
319 339 4.838904 ACGCTCCCTATTTAACCTTTCT 57.161 40.909 0.00 0.00 0.00 2.52
321 341 5.945144 TCTACGCTCCCTATTTAACCTTT 57.055 39.130 0.00 0.00 0.00 3.11
322 342 5.945144 TTCTACGCTCCCTATTTAACCTT 57.055 39.130 0.00 0.00 0.00 3.50
324 344 6.764560 TCATTTTCTACGCTCCCTATTTAACC 59.235 38.462 0.00 0.00 0.00 2.85
325 345 7.781548 TCATTTTCTACGCTCCCTATTTAAC 57.218 36.000 0.00 0.00 0.00 2.01
327 347 9.653287 CATATCATTTTCTACGCTCCCTATTTA 57.347 33.333 0.00 0.00 0.00 1.40
328 348 8.157476 ACATATCATTTTCTACGCTCCCTATTT 58.843 33.333 0.00 0.00 0.00 1.40
329 349 7.680730 ACATATCATTTTCTACGCTCCCTATT 58.319 34.615 0.00 0.00 0.00 1.73
330 350 7.246171 ACATATCATTTTCTACGCTCCCTAT 57.754 36.000 0.00 0.00 0.00 2.57
331 351 6.665992 ACATATCATTTTCTACGCTCCCTA 57.334 37.500 0.00 0.00 0.00 3.53
332 352 5.552870 ACATATCATTTTCTACGCTCCCT 57.447 39.130 0.00 0.00 0.00 4.20
337 363 6.988109 AGACGTACATATCATTTTCTACGC 57.012 37.500 0.00 0.00 32.18 4.42
363 389 1.347050 TGTGTGATGGGGGCAAAAATG 59.653 47.619 0.00 0.00 0.00 2.32
365 391 0.755686 GTGTGTGATGGGGGCAAAAA 59.244 50.000 0.00 0.00 0.00 1.94
373 410 0.953727 CACCTTGTGTGTGTGATGGG 59.046 55.000 0.00 0.00 40.26 4.00
395 432 6.265649 TCATACTCTTAAAAGGATCGAGGGAG 59.734 42.308 0.00 0.00 0.00 4.30
397 434 6.406692 TCATACTCTTAAAAGGATCGAGGG 57.593 41.667 0.00 0.00 0.00 4.30
398 435 6.418226 CGTTCATACTCTTAAAAGGATCGAGG 59.582 42.308 0.00 0.00 0.00 4.63
399 436 7.194278 TCGTTCATACTCTTAAAAGGATCGAG 58.806 38.462 0.00 0.00 0.00 4.04
400 437 7.092137 TCGTTCATACTCTTAAAAGGATCGA 57.908 36.000 0.00 0.00 0.00 3.59
401 438 7.932120 ATCGTTCATACTCTTAAAAGGATCG 57.068 36.000 0.00 0.00 0.00 3.69
403 440 9.262358 GCTTATCGTTCATACTCTTAAAAGGAT 57.738 33.333 0.00 0.00 0.00 3.24
404 441 8.475639 AGCTTATCGTTCATACTCTTAAAAGGA 58.524 33.333 0.00 0.00 0.00 3.36
405 442 8.649973 AGCTTATCGTTCATACTCTTAAAAGG 57.350 34.615 0.00 0.00 0.00 3.11
408 445 9.647797 TCAAAGCTTATCGTTCATACTCTTAAA 57.352 29.630 0.00 0.00 0.00 1.52
409 446 9.084164 GTCAAAGCTTATCGTTCATACTCTTAA 57.916 33.333 0.00 0.00 0.00 1.85
410 447 8.467598 AGTCAAAGCTTATCGTTCATACTCTTA 58.532 33.333 0.00 0.00 0.00 2.10
411 448 7.324178 AGTCAAAGCTTATCGTTCATACTCTT 58.676 34.615 0.00 0.00 0.00 2.85
412 449 6.868622 AGTCAAAGCTTATCGTTCATACTCT 58.131 36.000 0.00 0.00 0.00 3.24
413 450 7.916450 AGTAGTCAAAGCTTATCGTTCATACTC 59.084 37.037 0.00 0.00 0.00 2.59
414 451 7.773149 AGTAGTCAAAGCTTATCGTTCATACT 58.227 34.615 0.00 0.00 0.00 2.12
415 452 7.701078 TGAGTAGTCAAAGCTTATCGTTCATAC 59.299 37.037 0.00 0.00 0.00 2.39
416 453 7.701078 GTGAGTAGTCAAAGCTTATCGTTCATA 59.299 37.037 0.00 0.00 33.27 2.15
417 454 6.531948 GTGAGTAGTCAAAGCTTATCGTTCAT 59.468 38.462 0.00 0.00 33.27 2.57
418 455 5.862323 GTGAGTAGTCAAAGCTTATCGTTCA 59.138 40.000 0.00 0.00 33.27 3.18
419 456 6.094061 AGTGAGTAGTCAAAGCTTATCGTTC 58.906 40.000 0.00 0.00 33.27 3.95
438 475 7.589958 ATCCACCTATAGTTGAACTAGTGAG 57.410 40.000 18.95 12.27 33.66 3.51
440 477 7.556844 ACAATCCACCTATAGTTGAACTAGTG 58.443 38.462 11.09 12.38 33.66 2.74
446 483 7.174253 GTGTCAAACAATCCACCTATAGTTGAA 59.826 37.037 0.00 0.00 0.00 2.69
469 519 8.236586 GCCTTTTTGAAAGAAAGAAAAATGTGT 58.763 29.630 2.15 0.00 36.45 3.72
474 524 7.994425 AAGGCCTTTTTGAAAGAAAGAAAAA 57.006 28.000 13.78 0.00 36.45 1.94
479 529 5.874261 TGACAAAGGCCTTTTTGAAAGAAAG 59.126 36.000 28.42 14.77 39.79 2.62
488 538 1.770294 TCCGTGACAAAGGCCTTTTT 58.230 45.000 28.42 22.59 0.00 1.94
492 542 1.202879 TCAATTCCGTGACAAAGGCCT 60.203 47.619 0.00 0.00 0.00 5.19
495 545 5.586243 AGTGATATCAATTCCGTGACAAAGG 59.414 40.000 7.07 0.00 0.00 3.11
503 553 5.590259 CCTTTTCCAGTGATATCAATTCCGT 59.410 40.000 7.07 0.00 0.00 4.69
505 555 5.595952 AGCCTTTTCCAGTGATATCAATTCC 59.404 40.000 7.07 0.00 0.00 3.01
518 568 2.747436 GTGCTGAAAAGCCTTTTCCAG 58.253 47.619 23.39 20.07 46.49 3.86
537 2466 5.758296 ACAAAATTGATATCGGCAGATACGT 59.242 36.000 8.81 0.00 41.66 3.57
538 2467 6.228273 ACAAAATTGATATCGGCAGATACG 57.772 37.500 8.81 0.00 41.66 3.06
543 2472 5.049405 GGGAGTACAAAATTGATATCGGCAG 60.049 44.000 0.00 0.00 0.00 4.85
554 2483 3.260884 TGCGAGAGAGGGAGTACAAAATT 59.739 43.478 0.00 0.00 0.00 1.82
563 2492 1.255882 ATGCTATGCGAGAGAGGGAG 58.744 55.000 0.00 0.00 0.00 4.30
564 2493 2.586648 TATGCTATGCGAGAGAGGGA 57.413 50.000 0.00 0.00 0.00 4.20
565 2494 2.822561 TCTTATGCTATGCGAGAGAGGG 59.177 50.000 0.00 0.00 0.00 4.30
566 2495 3.669290 CGTCTTATGCTATGCGAGAGAGG 60.669 52.174 0.00 0.00 0.00 3.69
567 2496 3.058570 ACGTCTTATGCTATGCGAGAGAG 60.059 47.826 0.00 0.00 0.00 3.20
568 2497 2.879026 ACGTCTTATGCTATGCGAGAGA 59.121 45.455 0.00 0.00 0.00 3.10
569 2498 3.275400 ACGTCTTATGCTATGCGAGAG 57.725 47.619 0.00 0.00 0.00 3.20
570 2499 3.710326 AACGTCTTATGCTATGCGAGA 57.290 42.857 0.00 0.00 0.00 4.04
571 2500 7.742019 ATAATAACGTCTTATGCTATGCGAG 57.258 36.000 0.00 0.00 0.00 5.03
572 2501 9.447040 GATATAATAACGTCTTATGCTATGCGA 57.553 33.333 11.58 0.00 0.00 5.10
573 2502 9.233232 TGATATAATAACGTCTTATGCTATGCG 57.767 33.333 11.58 0.00 0.00 4.73
600 2529 9.104965 GCCACTTTATTAACATACTCACACATA 57.895 33.333 0.00 0.00 0.00 2.29
601 2530 7.067008 GGCCACTTTATTAACATACTCACACAT 59.933 37.037 0.00 0.00 0.00 3.21
602 2531 6.373216 GGCCACTTTATTAACATACTCACACA 59.627 38.462 0.00 0.00 0.00 3.72
603 2532 6.456449 CGGCCACTTTATTAACATACTCACAC 60.456 42.308 2.24 0.00 0.00 3.82
604 2533 5.583061 CGGCCACTTTATTAACATACTCACA 59.417 40.000 2.24 0.00 0.00 3.58
605 2534 5.583457 ACGGCCACTTTATTAACATACTCAC 59.417 40.000 2.24 0.00 0.00 3.51
606 2535 5.736813 ACGGCCACTTTATTAACATACTCA 58.263 37.500 2.24 0.00 0.00 3.41
607 2536 7.570691 GCATACGGCCACTTTATTAACATACTC 60.571 40.741 2.24 0.00 36.11 2.59
608 2537 6.204108 GCATACGGCCACTTTATTAACATACT 59.796 38.462 2.24 0.00 36.11 2.12
609 2538 6.017770 TGCATACGGCCACTTTATTAACATAC 60.018 38.462 2.24 0.00 43.89 2.39
610 2539 6.056236 TGCATACGGCCACTTTATTAACATA 58.944 36.000 2.24 0.00 43.89 2.29
611 2540 4.884744 TGCATACGGCCACTTTATTAACAT 59.115 37.500 2.24 0.00 43.89 2.71
612 2541 4.262617 TGCATACGGCCACTTTATTAACA 58.737 39.130 2.24 0.00 43.89 2.41
613 2542 4.886247 TGCATACGGCCACTTTATTAAC 57.114 40.909 2.24 0.00 43.89 2.01
614 2543 4.212425 CGATGCATACGGCCACTTTATTAA 59.788 41.667 2.24 0.00 43.89 1.40
615 2544 3.743911 CGATGCATACGGCCACTTTATTA 59.256 43.478 2.24 0.00 43.89 0.98
616 2545 2.548057 CGATGCATACGGCCACTTTATT 59.452 45.455 2.24 0.00 43.89 1.40
617 2546 2.143122 CGATGCATACGGCCACTTTAT 58.857 47.619 2.24 0.00 43.89 1.40
618 2547 1.577468 CGATGCATACGGCCACTTTA 58.423 50.000 2.24 0.00 43.89 1.85
619 2548 1.714899 GCGATGCATACGGCCACTTT 61.715 55.000 16.56 0.00 43.89 2.66
620 2549 2.180204 GCGATGCATACGGCCACTT 61.180 57.895 16.56 0.00 43.89 3.16
621 2550 2.588877 GCGATGCATACGGCCACT 60.589 61.111 16.56 0.00 43.89 4.00
626 2555 0.246360 TATCTGGGCGATGCATACGG 59.754 55.000 16.56 6.65 33.48 4.02
627 2556 1.336795 TGTATCTGGGCGATGCATACG 60.337 52.381 0.00 6.68 39.41 3.06
628 2557 2.029020 TCTGTATCTGGGCGATGCATAC 60.029 50.000 0.00 0.00 42.63 2.39
629 2558 2.232208 CTCTGTATCTGGGCGATGCATA 59.768 50.000 0.00 0.00 42.63 3.14
630 2559 1.001746 CTCTGTATCTGGGCGATGCAT 59.998 52.381 0.00 0.00 42.63 3.96
631 2560 0.390492 CTCTGTATCTGGGCGATGCA 59.610 55.000 0.00 0.00 41.58 3.96
632 2561 0.320247 CCTCTGTATCTGGGCGATGC 60.320 60.000 0.00 0.00 35.55 3.91
633 2562 0.320247 GCCTCTGTATCTGGGCGATG 60.320 60.000 0.00 0.00 35.08 3.84
634 2563 1.476007 GGCCTCTGTATCTGGGCGAT 61.476 60.000 0.00 0.00 44.91 4.58
635 2564 2.134287 GGCCTCTGTATCTGGGCGA 61.134 63.158 0.00 0.00 44.91 5.54
636 2565 2.423446 GGCCTCTGTATCTGGGCG 59.577 66.667 0.00 0.00 44.91 6.13
637 2566 2.093537 CTCGGCCTCTGTATCTGGGC 62.094 65.000 0.00 0.00 43.42 5.36
638 2567 0.468214 TCTCGGCCTCTGTATCTGGG 60.468 60.000 0.00 0.00 0.00 4.45
639 2568 0.958091 CTCTCGGCCTCTGTATCTGG 59.042 60.000 0.00 0.00 0.00 3.86
640 2569 1.606668 GACTCTCGGCCTCTGTATCTG 59.393 57.143 0.00 0.00 0.00 2.90
641 2570 1.493022 AGACTCTCGGCCTCTGTATCT 59.507 52.381 0.00 0.00 0.00 1.98
642 2571 1.975660 AGACTCTCGGCCTCTGTATC 58.024 55.000 0.00 0.00 0.00 2.24
643 2572 2.445682 AAGACTCTCGGCCTCTGTAT 57.554 50.000 0.00 0.00 0.00 2.29
644 2573 3.579534 ATAAGACTCTCGGCCTCTGTA 57.420 47.619 0.00 0.00 0.00 2.74
645 2574 2.445682 ATAAGACTCTCGGCCTCTGT 57.554 50.000 0.00 0.00 0.00 3.41
646 2575 6.576662 TTAATATAAGACTCTCGGCCTCTG 57.423 41.667 0.00 0.00 0.00 3.35
647 2576 6.294843 GCTTTAATATAAGACTCTCGGCCTCT 60.295 42.308 0.00 0.00 0.00 3.69
648 2577 5.865013 GCTTTAATATAAGACTCTCGGCCTC 59.135 44.000 0.00 0.00 0.00 4.70
649 2578 5.304614 TGCTTTAATATAAGACTCTCGGCCT 59.695 40.000 0.00 0.00 0.00 5.19
650 2579 5.405873 GTGCTTTAATATAAGACTCTCGGCC 59.594 44.000 0.00 0.00 0.00 6.13
651 2580 5.983720 TGTGCTTTAATATAAGACTCTCGGC 59.016 40.000 0.00 0.00 0.00 5.54
652 2581 7.306051 CGTTGTGCTTTAATATAAGACTCTCGG 60.306 40.741 0.00 0.00 0.00 4.63
653 2582 7.306051 CCGTTGTGCTTTAATATAAGACTCTCG 60.306 40.741 0.00 0.00 0.00 4.04
654 2583 7.042658 CCCGTTGTGCTTTAATATAAGACTCTC 60.043 40.741 0.00 0.00 0.00 3.20
655 2584 6.761714 CCCGTTGTGCTTTAATATAAGACTCT 59.238 38.462 0.00 0.00 0.00 3.24
656 2585 6.759827 TCCCGTTGTGCTTTAATATAAGACTC 59.240 38.462 0.00 0.00 0.00 3.36
657 2586 6.646267 TCCCGTTGTGCTTTAATATAAGACT 58.354 36.000 0.00 0.00 0.00 3.24
658 2587 6.537660 ACTCCCGTTGTGCTTTAATATAAGAC 59.462 38.462 0.00 0.00 0.00 3.01
659 2588 6.646267 ACTCCCGTTGTGCTTTAATATAAGA 58.354 36.000 0.00 0.00 0.00 2.10
660 2589 6.920569 ACTCCCGTTGTGCTTTAATATAAG 57.079 37.500 0.00 0.00 0.00 1.73
662 2591 9.647797 CATATACTCCCGTTGTGCTTTAATATA 57.352 33.333 0.00 0.00 0.00 0.86
663 2592 8.154856 ACATATACTCCCGTTGTGCTTTAATAT 58.845 33.333 0.00 0.00 0.00 1.28
664 2593 7.502696 ACATATACTCCCGTTGTGCTTTAATA 58.497 34.615 0.00 0.00 0.00 0.98
665 2594 6.354130 ACATATACTCCCGTTGTGCTTTAAT 58.646 36.000 0.00 0.00 0.00 1.40
666 2595 5.736813 ACATATACTCCCGTTGTGCTTTAA 58.263 37.500 0.00 0.00 0.00 1.52
667 2596 5.347620 ACATATACTCCCGTTGTGCTTTA 57.652 39.130 0.00 0.00 0.00 1.85
668 2597 4.216411 ACATATACTCCCGTTGTGCTTT 57.784 40.909 0.00 0.00 0.00 3.51
669 2598 3.906720 ACATATACTCCCGTTGTGCTT 57.093 42.857 0.00 0.00 0.00 3.91
670 2599 5.347620 TTTACATATACTCCCGTTGTGCT 57.652 39.130 0.00 0.00 0.00 4.40
671 2600 5.352016 TGTTTTACATATACTCCCGTTGTGC 59.648 40.000 0.00 0.00 0.00 4.57
672 2601 6.971527 TGTTTTACATATACTCCCGTTGTG 57.028 37.500 0.00 0.00 0.00 3.33
673 2602 9.841295 ATTATGTTTTACATATACTCCCGTTGT 57.159 29.630 0.77 0.00 40.41 3.32
676 2605 9.199982 CGAATTATGTTTTACATATACTCCCGT 57.800 33.333 0.77 0.00 40.41 5.28
677 2606 8.166706 GCGAATTATGTTTTACATATACTCCCG 58.833 37.037 0.77 0.00 40.41 5.14
678 2607 8.995220 TGCGAATTATGTTTTACATATACTCCC 58.005 33.333 0.77 0.00 40.41 4.30
708 2637 9.656040 ACATACAACAATGCATGAATTATGTTT 57.344 25.926 17.67 10.36 39.08 2.83
735 2664 8.259049 TCGGAAATGTATCGTTGTCTTAAAAT 57.741 30.769 0.00 0.00 0.00 1.82
747 2676 5.570973 TGCATTTGTTTTCGGAAATGTATCG 59.429 36.000 3.67 0.00 40.31 2.92
752 2681 6.949578 ATAGTGCATTTGTTTTCGGAAATG 57.050 33.333 3.67 0.00 40.87 2.32
753 2682 9.651913 AAATATAGTGCATTTGTTTTCGGAAAT 57.348 25.926 3.67 0.00 0.00 2.17
757 2686 9.950680 ATCTAAATATAGTGCATTTGTTTTCGG 57.049 29.630 0.00 0.00 0.00 4.30
821 2755 6.988580 GGACCTACCTACCACATGTATTTTAC 59.011 42.308 0.00 0.00 35.41 2.01
863 2797 2.097589 GGTCGCGCTAAAAAGCAAAAAC 60.098 45.455 5.56 0.00 34.41 2.43
869 4547 0.237498 ACAAGGTCGCGCTAAAAAGC 59.763 50.000 5.56 0.00 0.00 3.51
876 4554 1.301716 ACAATGACAAGGTCGCGCT 60.302 52.632 5.56 0.00 34.95 5.92
885 4564 1.202639 AGTGACGGAGCACAATGACAA 60.203 47.619 7.83 0.00 41.19 3.18
893 4572 1.699343 GTAGTTCAGTGACGGAGCAC 58.301 55.000 2.36 0.00 39.05 4.40
913 4593 3.317430 ACGGGTTCACCTAATATCGTCTC 59.683 47.826 0.00 0.00 36.97 3.36
915 4595 3.378339 CACGGGTTCACCTAATATCGTC 58.622 50.000 0.00 0.00 36.97 4.20
916 4596 2.101917 CCACGGGTTCACCTAATATCGT 59.898 50.000 0.00 0.00 36.97 3.73
917 4597 2.363038 TCCACGGGTTCACCTAATATCG 59.637 50.000 0.00 0.00 36.97 2.92
937 4620 3.115556 TGCCGTTGCAGTGGTTTC 58.884 55.556 7.97 0.00 44.23 2.78
960 4643 2.093658 GCGGGAAGGATAGACTTGTGAA 60.094 50.000 0.00 0.00 0.00 3.18
1174 4887 2.589492 GCGCGTGGAATCGGATGAG 61.589 63.158 8.43 0.00 0.00 2.90
1175 4888 2.584970 GCGCGTGGAATCGGATGA 60.585 61.111 8.43 0.00 0.00 2.92
1177 4890 2.279517 GAGCGCGTGGAATCGGAT 60.280 61.111 8.43 0.00 0.00 4.18
1586 5347 3.896133 GGATCCCGTACAGCGCGA 61.896 66.667 12.10 0.00 39.71 5.87
1745 5530 4.430765 GCCGGTCTTTCGCCTCGA 62.431 66.667 1.90 0.00 0.00 4.04
1926 5777 2.281761 AACTGCTTGGCCTGGTCG 60.282 61.111 3.32 0.00 0.00 4.79
1927 5778 2.328099 CGAACTGCTTGGCCTGGTC 61.328 63.158 3.32 0.00 0.00 4.02
1928 5779 2.281761 CGAACTGCTTGGCCTGGT 60.282 61.111 3.32 0.00 0.00 4.00
1929 5780 2.032528 TCGAACTGCTTGGCCTGG 59.967 61.111 3.32 0.00 0.00 4.45
1930 5781 2.328099 GGTCGAACTGCTTGGCCTG 61.328 63.158 3.32 0.00 0.00 4.85
1931 5782 2.032681 GGTCGAACTGCTTGGCCT 59.967 61.111 3.32 0.00 0.00 5.19
1932 5783 2.281484 TGGTCGAACTGCTTGGCC 60.281 61.111 0.33 0.00 0.00 5.36
1933 5784 2.328099 CCTGGTCGAACTGCTTGGC 61.328 63.158 0.33 0.00 0.00 4.52
1934 5785 0.951040 GTCCTGGTCGAACTGCTTGG 60.951 60.000 0.33 0.00 0.00 3.61
1935 5786 0.951040 GGTCCTGGTCGAACTGCTTG 60.951 60.000 0.33 0.00 0.00 4.01
1936 5787 1.122019 AGGTCCTGGTCGAACTGCTT 61.122 55.000 0.33 0.00 0.00 3.91
1937 5788 1.534235 AGGTCCTGGTCGAACTGCT 60.534 57.895 0.33 0.00 0.00 4.24
1938 5789 1.079750 GAGGTCCTGGTCGAACTGC 60.080 63.158 0.33 0.00 26.92 4.40
1939 5790 1.213013 CGAGGTCCTGGTCGAACTG 59.787 63.158 0.33 0.00 38.50 3.16
1940 5791 1.074423 TCGAGGTCCTGGTCGAACT 59.926 57.895 0.33 0.00 42.05 3.01
1941 5792 1.212229 GTCGAGGTCCTGGTCGAAC 59.788 63.158 9.15 0.00 46.18 3.95
1942 5793 2.330372 CGTCGAGGTCCTGGTCGAA 61.330 63.158 13.76 0.00 46.18 3.71
1943 5794 2.745100 CGTCGAGGTCCTGGTCGA 60.745 66.667 13.76 6.19 42.74 4.20
2013 5864 3.483788 TTGCGGCACCCACTGCTTA 62.484 57.895 0.05 0.00 46.25 3.09
2091 5942 3.640407 GTCAGGCCCTCCAGCACA 61.640 66.667 0.00 0.00 33.74 4.57
2276 6130 4.559063 CCCGGAGCTCCATGCCAG 62.559 72.222 31.67 14.37 44.23 4.85
2431 6288 0.659427 CTGTATGCATGCCAAGTCCG 59.341 55.000 16.68 0.00 0.00 4.79
2474 6331 2.509111 TGTATGCGCGCTCTGGTG 60.509 61.111 33.29 0.00 0.00 4.17
2594 6451 0.768622 AACGGGAATCTCCAACCACA 59.231 50.000 0.00 0.00 38.64 4.17
2610 6469 5.579384 TCAAAGTTTCCGTATACACAACG 57.421 39.130 3.32 0.00 40.01 4.10
2621 6482 3.862267 TGCACAAAACATCAAAGTTTCCG 59.138 39.130 0.00 0.00 40.60 4.30
2627 6488 6.528014 TTATGCTTGCACAAAACATCAAAG 57.472 33.333 0.00 0.00 0.00 2.77
2632 6493 4.931002 GGACATTATGCTTGCACAAAACAT 59.069 37.500 0.00 4.54 0.00 2.71
2663 6906 7.304735 CAACATGTTTTTCATAGTGAATCCGA 58.695 34.615 8.77 0.00 36.11 4.55
2671 6914 5.990386 TGCATTGCAACATGTTTTTCATAGT 59.010 32.000 8.77 0.00 34.76 2.12
2740 7090 3.181511 CGGCAGAGAAAATATGAACGCAA 60.182 43.478 0.00 0.00 0.00 4.85
2741 7091 2.351418 CGGCAGAGAAAATATGAACGCA 59.649 45.455 0.00 0.00 0.00 5.24
2762 7112 9.547279 AAATGGAATTAATGGGAGATTATACCC 57.453 33.333 0.00 0.00 40.49 3.69
2791 7141 8.717821 CGTCCGACAAATTTGTATGGATTATAT 58.282 33.333 31.66 8.21 43.41 0.86
2800 7150 5.209240 CAACAACGTCCGACAAATTTGTAT 58.791 37.500 23.33 2.10 42.43 2.29
2801 7151 4.496010 CCAACAACGTCCGACAAATTTGTA 60.496 41.667 23.33 5.99 42.43 2.41
2802 7152 3.430931 CAACAACGTCCGACAAATTTGT 58.569 40.909 23.49 23.49 45.65 2.83
2803 7153 2.786578 CCAACAACGTCCGACAAATTTG 59.213 45.455 16.67 16.67 0.00 2.32
2804 7154 2.683867 TCCAACAACGTCCGACAAATTT 59.316 40.909 0.00 0.00 0.00 1.82
2805 7155 2.290464 TCCAACAACGTCCGACAAATT 58.710 42.857 0.00 0.00 0.00 1.82
2806 7156 1.956297 TCCAACAACGTCCGACAAAT 58.044 45.000 0.00 0.00 0.00 2.32
2807 7157 1.735386 TTCCAACAACGTCCGACAAA 58.265 45.000 0.00 0.00 0.00 2.83
2808 7158 1.735386 TTTCCAACAACGTCCGACAA 58.265 45.000 0.00 0.00 0.00 3.18
2809 7159 1.956297 ATTTCCAACAACGTCCGACA 58.044 45.000 0.00 0.00 0.00 4.35
2810 7160 3.930848 AGATATTTCCAACAACGTCCGAC 59.069 43.478 0.00 0.00 0.00 4.79
2811 7161 4.196626 AGATATTTCCAACAACGTCCGA 57.803 40.909 0.00 0.00 0.00 4.55
2812 7162 5.983720 AGATAGATATTTCCAACAACGTCCG 59.016 40.000 0.00 0.00 0.00 4.79
2813 7163 6.761714 ACAGATAGATATTTCCAACAACGTCC 59.238 38.462 0.00 0.00 0.00 4.79
2950 7302 1.474320 CGCCCCATAGATCGTTCCAAA 60.474 52.381 0.00 0.00 0.00 3.28
2952 7304 1.046472 ACGCCCCATAGATCGTTCCA 61.046 55.000 0.00 0.00 0.00 3.53
3122 7480 6.093909 CCAATAGTTGTCATGCTACATCACAA 59.906 38.462 0.00 0.00 0.00 3.33
3124 7482 5.817296 TCCAATAGTTGTCATGCTACATCAC 59.183 40.000 0.00 0.00 0.00 3.06
3150 7508 6.494893 ACGCACAAAAGTTGTCATATATGT 57.505 33.333 12.42 0.00 43.23 2.29
3172 7530 6.820656 CCATATAGGGAGAATTGACATGCTAC 59.179 42.308 0.00 0.00 0.00 3.58
3209 7567 1.704070 GAATCTCATCTCCAGGGCCAT 59.296 52.381 6.18 0.00 0.00 4.40
3210 7568 1.135094 GAATCTCATCTCCAGGGCCA 58.865 55.000 6.18 0.00 0.00 5.36
3233 7591 3.494048 GCTTGAGATGGTGTATGGGAGAG 60.494 52.174 0.00 0.00 0.00 3.20
3240 7598 4.122776 GTCATTCGCTTGAGATGGTGTAT 58.877 43.478 0.00 0.00 0.00 2.29
3309 7667 6.701400 ACACAAAAGTTGTCATAAATGCTTCC 59.299 34.615 0.00 0.00 43.23 3.46
3317 7675 7.012799 TGACATGCTACACAAAAGTTGTCATAA 59.987 33.333 0.00 0.00 43.23 1.90
3369 7750 4.103311 AGAACTGTCAGGCTAAGAAAAGGT 59.897 41.667 4.53 0.00 0.00 3.50
3385 7766 3.266510 TGTTGTTGCAGAGAGAACTGT 57.733 42.857 0.00 0.00 39.73 3.55
3389 7770 3.807553 TGACATGTTGTTGCAGAGAGAA 58.192 40.909 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.