Multiple sequence alignment - TraesCS1D01G348100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G348100 chr1D 100.000 6252 0 0 1 6252 435155346 435149095 0.000000e+00 11546.0
1 TraesCS1D01G348100 chr1D 99.112 338 3 0 369 706 434335076 434335413 5.360000e-170 608.0
2 TraesCS1D01G348100 chr1D 98.476 328 5 0 1 328 434334743 434335070 4.200000e-161 579.0
3 TraesCS1D01G348100 chr1D 82.768 383 66 0 1396 1778 435343698 435344080 6.000000e-90 342.0
4 TraesCS1D01G348100 chr1D 97.368 152 4 0 6101 6252 217641473 217641624 6.220000e-65 259.0
5 TraesCS1D01G348100 chr1D 77.895 285 55 7 1401 1678 424453265 424453548 3.000000e-38 171.0
6 TraesCS1D01G348100 chr1D 89.157 83 8 1 5279 5361 435149697 435149616 1.110000e-17 102.0
7 TraesCS1D01G348100 chr1D 89.157 83 8 1 5650 5731 435150068 435149986 1.110000e-17 102.0
8 TraesCS1D01G348100 chr1A 95.502 3290 119 8 2706 5969 532744292 532741006 0.000000e+00 5228.0
9 TraesCS1D01G348100 chr1A 83.535 2721 341 57 2759 5433 532766196 532763537 0.000000e+00 2444.0
10 TraesCS1D01G348100 chr1A 75.048 2064 373 85 2755 4761 532617143 532615165 0.000000e+00 828.0
11 TraesCS1D01G348100 chr1A 81.775 631 97 13 1175 1795 532745975 532745353 4.320000e-141 512.0
12 TraesCS1D01G348100 chr1A 92.737 358 18 3 1893 2247 532745330 532744978 1.550000e-140 510.0
13 TraesCS1D01G348100 chr1A 79.499 678 107 16 1906 2564 532767034 532766370 2.660000e-123 453.0
14 TraesCS1D01G348100 chr1A 87.668 373 46 0 2249 2621 532744661 532744289 9.630000e-118 435.0
15 TraesCS1D01G348100 chr1A 80.208 576 98 11 1224 1794 532618813 532618249 9.690000e-113 418.0
16 TraesCS1D01G348100 chr1A 89.583 240 12 8 707 936 532746563 532746327 6.130000e-75 292.0
17 TraesCS1D01G348100 chr1A 77.618 487 90 14 4264 4737 532911908 532912388 1.720000e-70 278.0
18 TraesCS1D01G348100 chr1A 75.290 518 115 11 4850 5363 532615122 532614614 1.050000e-57 235.0
19 TraesCS1D01G348100 chr1A 96.403 139 5 0 5965 6103 532740827 532740689 4.870000e-56 230.0
20 TraesCS1D01G348100 chr1A 74.793 484 104 15 1235 1706 532435907 532436384 1.060000e-47 202.0
21 TraesCS1D01G348100 chr1A 81.529 157 16 8 5279 5428 532741324 532741174 3.960000e-22 117.0
22 TraesCS1D01G348100 chr1A 91.429 70 6 0 2644 2713 459527307 459527376 5.160000e-16 97.1
23 TraesCS1D01G348100 chr1B 90.653 3402 254 36 2708 6083 588488212 588484849 0.000000e+00 4462.0
24 TraesCS1D01G348100 chr1B 74.964 2065 373 90 2755 4761 588320282 588318304 0.000000e+00 817.0
25 TraesCS1D01G348100 chr1B 79.404 1175 155 51 704 1803 588490609 588489447 0.000000e+00 749.0
26 TraesCS1D01G348100 chr1B 90.400 375 32 2 2249 2621 588488583 588488211 2.030000e-134 490.0
27 TraesCS1D01G348100 chr1B 79.652 575 103 14 1224 1794 588321955 588321391 9.760000e-108 401.0
28 TraesCS1D01G348100 chr1B 82.955 440 64 9 1343 1778 588643955 588644387 2.730000e-103 387.0
29 TraesCS1D01G348100 chr1B 78.243 478 84 19 4268 4737 588648207 588648672 7.930000e-74 289.0
30 TraesCS1D01G348100 chr1B 76.493 519 107 12 4850 5363 588318261 588317753 1.030000e-67 268.0
31 TraesCS1D01G348100 chr1B 98.246 57 1 0 2653 2709 341262336 341262280 3.990000e-17 100.0
32 TraesCS1D01G348100 chr6D 77.372 548 99 21 1243 1770 84685625 84685083 1.020000e-77 302.0
33 TraesCS1D01G348100 chr6D 77.196 535 99 19 1237 1752 85504848 85505378 2.200000e-74 291.0
34 TraesCS1D01G348100 chr6D 82.547 212 37 0 4504 4715 84682476 84682265 2.980000e-43 187.0
35 TraesCS1D01G348100 chr7A 98.013 151 3 0 6102 6252 424976368 424976518 4.810000e-66 263.0
36 TraesCS1D01G348100 chr5B 98.013 151 3 0 6102 6252 656245626 656245476 4.810000e-66 263.0
37 TraesCS1D01G348100 chr5B 91.667 72 6 0 2643 2714 105764701 105764630 3.990000e-17 100.0
38 TraesCS1D01G348100 chr4D 98.013 151 3 0 6102 6252 115044520 115044370 4.810000e-66 263.0
39 TraesCS1D01G348100 chr4D 98.013 151 3 0 6102 6252 488271334 488271184 4.810000e-66 263.0
40 TraesCS1D01G348100 chr4D 97.143 70 2 0 1808 1877 108221453 108221384 1.100000e-22 119.0
41 TraesCS1D01G348100 chr4D 95.455 44 2 0 1834 1877 108220242 108220285 3.130000e-08 71.3
42 TraesCS1D01G348100 chr3D 98.013 151 3 0 6102 6252 563448942 563449092 4.810000e-66 263.0
43 TraesCS1D01G348100 chr2D 98.013 151 3 0 6102 6252 355705425 355705275 4.810000e-66 263.0
44 TraesCS1D01G348100 chr2D 98.013 151 3 0 6102 6252 541547530 541547380 4.810000e-66 263.0
45 TraesCS1D01G348100 chr2D 93.939 66 4 0 2644 2709 51074081 51074146 3.990000e-17 100.0
46 TraesCS1D01G348100 chr2D 85.366 82 11 1 623 703 528439201 528439282 4.020000e-12 84.2
47 TraesCS1D01G348100 chr3A 96.226 159 5 1 6095 6252 478701474 478701316 6.220000e-65 259.0
48 TraesCS1D01G348100 chr6B 73.524 593 118 28 4136 4715 161350252 161349686 8.270000e-44 189.0
49 TraesCS1D01G348100 chr6B 91.525 59 4 1 645 703 75033293 75033350 5.200000e-11 80.5
50 TraesCS1D01G348100 chr5A 92.754 69 5 0 2647 2715 416180082 416180150 3.990000e-17 100.0
51 TraesCS1D01G348100 chr4A 95.238 63 3 0 2653 2715 680328424 680328362 3.990000e-17 100.0
52 TraesCS1D01G348100 chr4A 83.810 105 12 4 2610 2709 596219040 596219144 1.860000e-15 95.3
53 TraesCS1D01G348100 chr2A 91.304 69 6 0 2643 2711 115248024 115247956 1.860000e-15 95.3
54 TraesCS1D01G348100 chr3B 88.312 77 9 0 2637 2713 178387624 178387700 6.670000e-15 93.5
55 TraesCS1D01G348100 chr3B 87.692 65 6 2 643 706 50419442 50419379 2.420000e-09 75.0
56 TraesCS1D01G348100 chrUn 93.220 59 3 1 645 703 177128419 177128362 1.120000e-12 86.1
57 TraesCS1D01G348100 chrUn 93.220 59 3 1 645 703 177134281 177134224 1.120000e-12 86.1
58 TraesCS1D01G348100 chrUn 93.220 59 3 1 645 703 306189225 306189168 1.120000e-12 86.1
59 TraesCS1D01G348100 chrUn 89.855 69 4 3 636 703 315710103 315710169 1.120000e-12 86.1
60 TraesCS1D01G348100 chr2B 89.855 69 4 3 636 703 3786175 3786241 1.120000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G348100 chr1D 435149095 435155346 6251 True 11546.000000 11546 100.000000 1 6252 1 chr1D.!!$R1 6251
1 TraesCS1D01G348100 chr1D 434334743 434335413 670 False 593.500000 608 98.794000 1 706 2 chr1D.!!$F4 705
2 TraesCS1D01G348100 chr1A 532763537 532767034 3497 True 1448.500000 2444 81.517000 1906 5433 2 chr1A.!!$R3 3527
3 TraesCS1D01G348100 chr1A 532740689 532746563 5874 True 1046.285714 5228 89.313857 707 6103 7 chr1A.!!$R2 5396
4 TraesCS1D01G348100 chr1A 532614614 532618813 4199 True 493.666667 828 76.848667 1224 5363 3 chr1A.!!$R1 4139
5 TraesCS1D01G348100 chr1B 588484849 588490609 5760 True 1900.333333 4462 86.819000 704 6083 3 chr1B.!!$R3 5379
6 TraesCS1D01G348100 chr1B 588317753 588321955 4202 True 495.333333 817 77.036333 1224 5363 3 chr1B.!!$R2 4139
7 TraesCS1D01G348100 chr1B 588643955 588648672 4717 False 338.000000 387 80.599000 1343 4737 2 chr1B.!!$F1 3394
8 TraesCS1D01G348100 chr6D 85504848 85505378 530 False 291.000000 291 77.196000 1237 1752 1 chr6D.!!$F1 515
9 TraesCS1D01G348100 chr6D 84682265 84685625 3360 True 244.500000 302 79.959500 1243 4715 2 chr6D.!!$R1 3472

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
753 754 0.240945 GACAAACCAACCCTGCATCG 59.759 55.0 0.00 0.0 0.00 3.84 F
1722 1889 0.034337 AACACGTTGTATCGGCAGGT 59.966 50.0 0.00 0.0 34.94 4.00 F
1825 1992 0.035598 TTGGGATTTCGAACCAGCGA 59.964 50.0 0.00 0.0 38.72 4.93 F
1849 2016 0.465097 CATCTTGTAGGGGCAGCTGG 60.465 60.0 17.12 0.0 0.00 4.85 F
1869 2036 0.615331 ACAACCACCAGAGCGATGAT 59.385 50.0 0.00 0.0 0.00 2.45 F
2782 5027 0.865769 CTTGTGTGTTACTGTCGGCC 59.134 55.0 0.00 0.0 0.00 6.13 F
2962 5255 0.878416 TTAACTTGCGACCATGCACC 59.122 50.0 0.00 0.0 46.25 5.01 F
3575 5989 2.031258 TCGACAACAACTCTTGCCAA 57.969 45.0 0.00 0.0 0.00 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2427 4544 0.036164 TGTTGTACCGGCTCAAGCAT 59.964 50.000 0.00 0.0 44.36 3.79 R
2731 4968 2.362397 GGAGTAATCAGAGGTCATGCGA 59.638 50.000 0.00 0.0 0.00 5.10 R
3491 5905 4.415596 ACCATTAGCAATTTTGACCAGGA 58.584 39.130 0.00 0.0 0.00 3.86 R
3613 6033 4.574759 CGCAACTATCGGAACAACAATAC 58.425 43.478 0.00 0.0 0.00 1.89 R
4251 6742 2.488545 TGCTCTTCTTACAGACGGACTC 59.511 50.000 0.00 0.0 0.00 3.36 R
4352 6871 0.324275 AGAGCCTCTGTCTCCAGGTC 60.324 60.000 0.00 0.0 39.31 3.85 R
4499 7054 2.230508 CCCTGCATGCACATCATATTCC 59.769 50.000 18.46 0.0 33.19 3.01 R
5470 8034 1.278985 TCGTTCACCATGAGAAGGCAT 59.721 47.619 12.70 0.0 32.53 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 3.325135 CAGTTTATCCTAATCTCCCCGCT 59.675 47.826 0.00 0.00 0.00 5.52
142 143 2.229062 TCCTCAATCTGTCACACTCGTC 59.771 50.000 0.00 0.00 0.00 4.20
242 243 4.261405 CCGCTTCTAATCTAGTGAGTCCTG 60.261 50.000 0.00 0.00 0.00 3.86
333 334 9.565213 GAAATAAAATGTGCTCCAGATATATGC 57.435 33.333 0.00 0.00 0.00 3.14
334 335 5.972107 AAAATGTGCTCCAGATATATGCC 57.028 39.130 0.00 0.00 0.00 4.40
335 336 4.645863 AATGTGCTCCAGATATATGCCA 57.354 40.909 0.00 0.00 0.00 4.92
336 337 4.857130 ATGTGCTCCAGATATATGCCAT 57.143 40.909 0.00 0.00 0.00 4.40
337 338 5.963214 ATGTGCTCCAGATATATGCCATA 57.037 39.130 0.00 0.00 0.00 2.74
338 339 5.963214 TGTGCTCCAGATATATGCCATAT 57.037 39.130 2.25 2.25 0.00 1.78
339 340 5.922053 TGTGCTCCAGATATATGCCATATC 58.078 41.667 0.00 7.14 0.00 1.63
340 341 5.664457 TGTGCTCCAGATATATGCCATATCT 59.336 40.000 0.00 10.64 40.80 1.98
341 342 6.840705 TGTGCTCCAGATATATGCCATATCTA 59.159 38.462 14.39 3.85 38.80 1.98
342 343 7.015001 TGTGCTCCAGATATATGCCATATCTAG 59.985 40.741 14.39 11.51 38.80 2.43
343 344 6.496218 TGCTCCAGATATATGCCATATCTAGG 59.504 42.308 14.39 15.98 38.80 3.02
344 345 6.723515 GCTCCAGATATATGCCATATCTAGGA 59.276 42.308 20.48 20.48 38.80 2.94
345 346 7.093814 GCTCCAGATATATGCCATATCTAGGAG 60.094 44.444 28.66 28.66 45.09 3.69
346 347 8.061890 TCCAGATATATGCCATATCTAGGAGA 57.938 38.462 19.30 12.29 38.80 3.71
347 348 8.686245 TCCAGATATATGCCATATCTAGGAGAT 58.314 37.037 19.30 0.00 38.80 2.75
348 349 8.970020 CCAGATATATGCCATATCTAGGAGATC 58.030 40.741 14.39 0.00 38.80 2.75
349 350 9.531158 CAGATATATGCCATATCTAGGAGATCA 57.469 37.037 14.39 0.00 38.80 2.92
357 358 9.676861 TGCCATATCTAGGAGATCAATTAAATG 57.323 33.333 0.00 0.00 36.20 2.32
358 359 9.678260 GCCATATCTAGGAGATCAATTAAATGT 57.322 33.333 0.00 0.00 36.20 2.71
753 754 0.240945 GACAAACCAACCCTGCATCG 59.759 55.000 0.00 0.00 0.00 3.84
756 757 0.609131 AAACCAACCCTGCATCGAGG 60.609 55.000 0.00 0.00 0.00 4.63
839 849 4.511826 CGGAAAGTTGACAAACTAGCTCTT 59.488 41.667 0.00 0.00 46.15 2.85
840 850 5.694910 CGGAAAGTTGACAAACTAGCTCTTA 59.305 40.000 0.00 0.00 46.15 2.10
859 869 4.686091 TCTTAATCAAGTCAACTGCACTCG 59.314 41.667 0.00 0.00 33.20 4.18
874 885 2.279584 TCGCAGTCGTCGCCAAAA 60.280 55.556 0.00 0.00 36.96 2.44
890 901 8.385111 CGTCGCCAAAACTAGAAGATAATTTTA 58.615 33.333 0.00 0.00 0.00 1.52
919 930 2.009774 GTGGCCATGTGATGTGTCTAC 58.990 52.381 9.72 0.00 0.00 2.59
920 931 1.065491 TGGCCATGTGATGTGTCTACC 60.065 52.381 0.00 0.00 0.00 3.18
956 990 5.349824 GCTTAAGGCTACTTGACATATGC 57.650 43.478 1.58 0.00 37.53 3.14
973 1039 8.200120 TGACATATGCATATATCTTGTCCTAGC 58.800 37.037 24.41 9.24 0.00 3.42
979 1045 7.831753 TGCATATATCTTGTCCTAGCTACTTC 58.168 38.462 0.00 0.00 0.00 3.01
981 1047 7.973388 GCATATATCTTGTCCTAGCTACTTCTG 59.027 40.741 0.00 0.00 0.00 3.02
982 1048 4.664150 ATCTTGTCCTAGCTACTTCTGC 57.336 45.455 0.00 0.00 0.00 4.26
983 1049 3.702792 TCTTGTCCTAGCTACTTCTGCT 58.297 45.455 0.00 0.00 43.79 4.24
984 1050 3.445450 TCTTGTCCTAGCTACTTCTGCTG 59.555 47.826 0.00 0.00 41.32 4.41
987 1053 3.677002 CTAGCTACTTCTGCTGGGC 57.323 57.895 0.00 0.00 41.32 5.36
988 1054 0.826715 CTAGCTACTTCTGCTGGGCA 59.173 55.000 0.00 0.00 41.32 5.36
989 1055 1.208052 CTAGCTACTTCTGCTGGGCAA 59.792 52.381 0.00 0.00 41.32 4.52
1016 1082 2.171079 GCATGTGCGCGCCTAGTAA 61.171 57.895 30.77 5.30 0.00 2.24
1022 1088 0.391927 TGCGCGCCTAGTAAAATGGT 60.392 50.000 30.77 0.00 0.00 3.55
1051 1132 2.259818 CGTTGACGCTCCTGCTCT 59.740 61.111 0.00 0.00 36.97 4.09
1121 1205 0.741915 CCTAGTCTCGAAGGTGAGCC 59.258 60.000 0.00 0.00 35.90 4.70
1143 1227 8.728337 AGCCTACAAGTATTATCATATGCATG 57.272 34.615 10.16 0.00 0.00 4.06
1144 1228 7.281774 AGCCTACAAGTATTATCATATGCATGC 59.718 37.037 11.82 11.82 31.73 4.06
1145 1229 7.624661 CCTACAAGTATTATCATATGCATGCG 58.375 38.462 14.09 0.00 31.73 4.73
1146 1230 5.872635 ACAAGTATTATCATATGCATGCGC 58.127 37.500 14.09 0.00 39.24 6.09
1147 1231 5.645067 ACAAGTATTATCATATGCATGCGCT 59.355 36.000 14.09 5.45 39.64 5.92
1148 1232 6.149973 ACAAGTATTATCATATGCATGCGCTT 59.850 34.615 14.09 0.00 39.64 4.68
1151 1235 4.834357 TTATCATATGCATGCGCTTTGT 57.166 36.364 14.09 0.34 39.64 2.83
1153 1237 1.744522 TCATATGCATGCGCTTTGTGT 59.255 42.857 14.09 2.57 39.64 3.72
1155 1239 2.261037 TATGCATGCGCTTTGTGTTC 57.739 45.000 14.09 0.00 39.64 3.18
1156 1240 0.388907 ATGCATGCGCTTTGTGTTCC 60.389 50.000 14.09 0.00 39.64 3.62
1157 1241 1.286880 GCATGCGCTTTGTGTTCCT 59.713 52.632 9.73 0.00 34.30 3.36
1158 1242 0.730494 GCATGCGCTTTGTGTTCCTC 60.730 55.000 9.73 0.00 34.30 3.71
1159 1243 0.109597 CATGCGCTTTGTGTTCCTCC 60.110 55.000 9.73 0.00 0.00 4.30
1161 1245 2.556287 CGCTTTGTGTTCCTCCGC 59.444 61.111 0.00 0.00 0.00 5.54
1163 1247 0.669318 CGCTTTGTGTTCCTCCGCTA 60.669 55.000 0.00 0.00 0.00 4.26
1164 1248 1.079503 GCTTTGTGTTCCTCCGCTAG 58.920 55.000 0.00 0.00 0.00 3.42
1165 1249 1.337823 GCTTTGTGTTCCTCCGCTAGA 60.338 52.381 0.00 0.00 0.00 2.43
1167 1251 2.672961 TTGTGTTCCTCCGCTAGATG 57.327 50.000 0.00 0.00 0.00 2.90
1168 1252 1.847328 TGTGTTCCTCCGCTAGATGA 58.153 50.000 0.00 0.00 0.00 2.92
1170 1254 2.565391 TGTGTTCCTCCGCTAGATGAAA 59.435 45.455 0.00 0.00 31.84 2.69
1171 1255 3.197766 TGTGTTCCTCCGCTAGATGAAAT 59.802 43.478 0.00 0.00 31.84 2.17
1172 1256 3.557595 GTGTTCCTCCGCTAGATGAAATG 59.442 47.826 0.00 0.00 31.84 2.32
1173 1257 3.134458 GTTCCTCCGCTAGATGAAATGG 58.866 50.000 0.00 0.00 31.84 3.16
1174 1258 1.694150 TCCTCCGCTAGATGAAATGGG 59.306 52.381 0.00 0.00 0.00 4.00
1175 1259 1.417890 CCTCCGCTAGATGAAATGGGT 59.582 52.381 0.00 0.00 0.00 4.51
1176 1260 2.632996 CCTCCGCTAGATGAAATGGGTA 59.367 50.000 0.00 0.00 0.00 3.69
1177 1261 3.306364 CCTCCGCTAGATGAAATGGGTAG 60.306 52.174 0.00 0.00 0.00 3.18
1178 1262 3.305720 TCCGCTAGATGAAATGGGTAGT 58.694 45.455 0.00 0.00 0.00 2.73
1179 1263 4.476297 TCCGCTAGATGAAATGGGTAGTA 58.524 43.478 0.00 0.00 0.00 1.82
1184 1328 4.060038 AGATGAAATGGGTAGTAGCGTG 57.940 45.455 0.00 0.00 0.00 5.34
1186 1330 2.967362 TGAAATGGGTAGTAGCGTGTG 58.033 47.619 0.00 0.00 0.00 3.82
1190 1334 0.319083 TGGGTAGTAGCGTGTGTTGG 59.681 55.000 0.00 0.00 0.00 3.77
1191 1335 1.017701 GGGTAGTAGCGTGTGTTGGC 61.018 60.000 0.00 0.00 0.00 4.52
1193 1337 1.068474 GTAGTAGCGTGTGTTGGCTG 58.932 55.000 0.00 0.00 40.32 4.85
1194 1338 0.669318 TAGTAGCGTGTGTTGGCTGC 60.669 55.000 0.00 0.00 40.32 5.25
1197 1341 1.227999 TAGCGTGTGTTGGCTGCTTC 61.228 55.000 0.00 0.00 40.32 3.86
1204 1348 1.001378 GTGTTGGCTGCTTCGTCAAAT 60.001 47.619 0.00 0.00 29.20 2.32
1208 1352 2.346803 TGGCTGCTTCGTCAAATCTAC 58.653 47.619 0.00 0.00 0.00 2.59
1214 1358 3.187700 GCTTCGTCAAATCTACATCCGT 58.812 45.455 0.00 0.00 0.00 4.69
1215 1359 4.142337 TGCTTCGTCAAATCTACATCCGTA 60.142 41.667 0.00 0.00 0.00 4.02
1216 1360 4.206609 GCTTCGTCAAATCTACATCCGTAC 59.793 45.833 0.00 0.00 0.00 3.67
1217 1361 3.943958 TCGTCAAATCTACATCCGTACG 58.056 45.455 8.69 8.69 0.00 3.67
1219 1363 4.100529 CGTCAAATCTACATCCGTACGTT 58.899 43.478 15.21 0.00 0.00 3.99
1222 1366 3.722728 AATCTACATCCGTACGTTCCC 57.277 47.619 15.21 0.00 0.00 3.97
1262 1414 2.725312 ATCACCATCGACTGCGGCT 61.725 57.895 0.00 0.00 38.28 5.52
1289 1441 1.153745 CAGAGCAGCTACGTGGACC 60.154 63.158 1.81 0.00 0.00 4.46
1290 1442 2.184579 GAGCAGCTACGTGGACCC 59.815 66.667 1.81 0.00 0.00 4.46
1303 1455 0.984230 TGGACCCTGTCACCAAGATC 59.016 55.000 0.00 0.00 33.68 2.75
1305 1457 0.108138 GACCCTGTCACCAAGATCCG 60.108 60.000 0.00 0.00 32.09 4.18
1306 1458 0.836400 ACCCTGTCACCAAGATCCGT 60.836 55.000 0.00 0.00 0.00 4.69
1307 1459 0.391661 CCCTGTCACCAAGATCCGTG 60.392 60.000 0.00 0.00 0.00 4.94
1308 1460 1.021390 CCTGTCACCAAGATCCGTGC 61.021 60.000 0.00 0.00 0.00 5.34
1311 1463 0.392998 GTCACCAAGATCCGTGCCAT 60.393 55.000 0.00 0.00 0.00 4.40
1312 1464 0.392863 TCACCAAGATCCGTGCCATG 60.393 55.000 0.00 0.00 0.00 3.66
1376 1528 2.203070 CCGAGTACATGGGCCAGC 60.203 66.667 13.78 1.99 0.00 4.85
1377 1529 2.735772 CCGAGTACATGGGCCAGCT 61.736 63.158 13.78 7.41 0.00 4.24
1398 1556 1.694856 GGATGGCCCCAAACTACCA 59.305 57.895 0.00 0.00 36.43 3.25
1510 1677 2.154569 GTACGGCAACTACGACGGC 61.155 63.158 0.00 0.00 34.93 5.68
1578 1745 0.736325 CGGACGGTGAACATCTCCAC 60.736 60.000 0.00 0.00 30.74 4.02
1600 1767 3.325753 GAGGGAGTGGTGCAGGCT 61.326 66.667 0.00 0.00 0.00 4.58
1615 1782 2.125512 GCTGAGGTCATCGCCGTT 60.126 61.111 0.00 0.00 0.00 4.44
1618 1785 1.354337 CTGAGGTCATCGCCGTTGTG 61.354 60.000 0.00 0.00 0.00 3.33
1620 1787 2.742372 GGTCATCGCCGTTGTGCT 60.742 61.111 0.00 0.00 0.00 4.40
1654 1821 0.258774 AGGTTTGCCTGGTGAACACT 59.741 50.000 13.62 7.57 45.05 3.55
1666 1833 2.847234 AACACTGGCTCCGGGACA 60.847 61.111 0.00 0.00 0.00 4.02
1678 1845 1.766496 TCCGGGACACCATTTATCTCC 59.234 52.381 0.00 0.00 36.13 3.71
1681 1848 2.224305 CGGGACACCATTTATCTCCTCC 60.224 54.545 0.00 0.00 36.13 4.30
1682 1849 3.049344 GGGACACCATTTATCTCCTCCT 58.951 50.000 0.00 0.00 36.50 3.69
1687 1854 2.175715 ACCATTTATCTCCTCCTTGGCC 59.824 50.000 0.00 0.00 35.26 5.36
1722 1889 0.034337 AACACGTTGTATCGGCAGGT 59.966 50.000 0.00 0.00 34.94 4.00
1726 1893 1.066430 ACGTTGTATCGGCAGGTGAAT 60.066 47.619 0.00 0.00 34.94 2.57
1748 1915 3.114616 CACAGGCGCTTGTCCTCG 61.115 66.667 23.55 7.80 0.00 4.63
1784 1951 2.970324 GCGACACGGGCAACTTCA 60.970 61.111 0.00 0.00 0.00 3.02
1809 1976 7.026631 CCATTAGGTACACAACACATATTGG 57.973 40.000 0.00 0.00 33.63 3.16
1813 1980 5.826643 AGGTACACAACACATATTGGGATT 58.173 37.500 0.00 0.00 36.42 3.01
1814 1981 6.252995 AGGTACACAACACATATTGGGATTT 58.747 36.000 0.00 0.00 36.42 2.17
1815 1982 6.377146 AGGTACACAACACATATTGGGATTTC 59.623 38.462 0.00 0.00 36.42 2.17
1817 1984 5.007034 ACACAACACATATTGGGATTTCGA 58.993 37.500 0.00 0.00 36.42 3.71
1819 1986 5.799936 CACAACACATATTGGGATTTCGAAC 59.200 40.000 0.00 0.00 34.72 3.95
1820 1987 5.105917 ACAACACATATTGGGATTTCGAACC 60.106 40.000 0.00 0.00 33.63 3.62
1821 1988 4.594970 ACACATATTGGGATTTCGAACCA 58.405 39.130 0.00 0.00 0.00 3.67
1822 1989 4.640201 ACACATATTGGGATTTCGAACCAG 59.360 41.667 0.00 0.00 35.37 4.00
1824 1991 1.094785 ATTGGGATTTCGAACCAGCG 58.905 50.000 0.00 0.00 35.37 5.18
1825 1992 0.035598 TTGGGATTTCGAACCAGCGA 59.964 50.000 0.00 0.00 38.72 4.93
1826 1993 0.672401 TGGGATTTCGAACCAGCGAC 60.672 55.000 0.00 0.00 40.42 5.19
1827 1994 1.693083 GGGATTTCGAACCAGCGACG 61.693 60.000 0.00 0.00 40.42 5.12
1830 1997 1.897398 ATTTCGAACCAGCGACGTGC 61.897 55.000 0.00 0.00 46.98 5.34
1840 2007 1.999051 GCGACGTGCATCTTGTAGG 59.001 57.895 0.00 0.00 45.45 3.18
1841 2008 1.421410 GCGACGTGCATCTTGTAGGG 61.421 60.000 0.00 0.00 45.45 3.53
1842 2009 0.806102 CGACGTGCATCTTGTAGGGG 60.806 60.000 0.00 0.00 0.00 4.79
1848 2015 1.099879 GCATCTTGTAGGGGCAGCTG 61.100 60.000 10.11 10.11 0.00 4.24
1849 2016 0.465097 CATCTTGTAGGGGCAGCTGG 60.465 60.000 17.12 0.00 0.00 4.85
1851 2018 1.078143 CTTGTAGGGGCAGCTGGAC 60.078 63.158 17.12 0.00 0.00 4.02
1852 2019 1.841302 CTTGTAGGGGCAGCTGGACA 61.841 60.000 17.12 0.00 0.00 4.02
1853 2020 1.422977 TTGTAGGGGCAGCTGGACAA 61.423 55.000 17.12 0.25 0.00 3.18
1854 2021 1.377333 GTAGGGGCAGCTGGACAAC 60.377 63.158 17.12 0.00 0.00 3.32
1857 2024 2.985847 GGGCAGCTGGACAACCAC 60.986 66.667 17.12 0.00 41.77 4.16
1858 2025 2.985847 GGCAGCTGGACAACCACC 60.986 66.667 17.12 0.93 41.77 4.61
1859 2026 2.203337 GCAGCTGGACAACCACCA 60.203 61.111 17.12 0.00 41.77 4.17
1866 2033 1.296715 GGACAACCACCAGAGCGAT 59.703 57.895 0.00 0.00 35.97 4.58
1867 2034 1.021390 GGACAACCACCAGAGCGATG 61.021 60.000 0.00 0.00 35.97 3.84
1869 2036 0.615331 ACAACCACCAGAGCGATGAT 59.385 50.000 0.00 0.00 0.00 2.45
1870 2037 1.012086 CAACCACCAGAGCGATGATG 58.988 55.000 0.00 0.00 0.00 3.07
1871 2038 0.904649 AACCACCAGAGCGATGATGA 59.095 50.000 0.00 0.00 0.00 2.92
1872 2039 1.126488 ACCACCAGAGCGATGATGAT 58.874 50.000 0.00 0.00 0.00 2.45
1874 2041 2.141517 CCACCAGAGCGATGATGATTC 58.858 52.381 0.00 0.00 0.00 2.52
1876 2043 2.543012 CACCAGAGCGATGATGATTCAC 59.457 50.000 0.00 0.00 33.85 3.18
1880 2220 4.388165 CCAGAGCGATGATGATTCACATAC 59.612 45.833 0.00 0.00 39.56 2.39
1885 2225 6.458210 AGCGATGATGATTCACATACACATA 58.542 36.000 0.00 0.00 39.56 2.29
1889 2229 8.173130 CGATGATGATTCACATACACATATTGG 58.827 37.037 0.00 0.00 39.56 3.16
1898 2238 5.764686 CACATACACATATTGGTAGGTGCAT 59.235 40.000 12.61 0.00 44.27 3.96
1904 2244 5.470098 CACATATTGGTAGGTGCATAGAACC 59.530 44.000 0.00 0.00 36.03 3.62
2030 2385 3.325135 ACATCTCAACGAAGGAGAAGGTT 59.675 43.478 8.90 0.00 44.01 3.50
2072 2433 3.753434 CTCCACGCTCCGTCTGCT 61.753 66.667 0.00 0.00 38.32 4.24
2108 2469 1.007271 CACGGTGCTCAACGACTCT 60.007 57.895 14.69 0.00 45.97 3.24
2265 3025 9.804758 ACACTATACTAAACTAATGAGAGCAAC 57.195 33.333 0.00 0.00 0.00 4.17
2376 4460 0.917333 ACGGACCCAACCACCCATAT 60.917 55.000 0.00 0.00 0.00 1.78
2427 4544 2.547299 ACGATGTTAAACCCCACGAA 57.453 45.000 0.00 0.00 0.00 3.85
2558 4720 3.265995 ACCGACCTTCAGGATGGTAAATT 59.734 43.478 10.79 0.00 41.76 1.82
2623 4859 8.173542 TCATCTACGCTGGTTGATTAGTATTA 57.826 34.615 0.00 0.00 36.66 0.98
2624 4860 8.080417 TCATCTACGCTGGTTGATTAGTATTAC 58.920 37.037 0.00 0.00 36.66 1.89
2625 4861 6.742109 TCTACGCTGGTTGATTAGTATTACC 58.258 40.000 0.00 0.00 0.00 2.85
2626 4862 5.609533 ACGCTGGTTGATTAGTATTACCT 57.390 39.130 0.00 0.00 0.00 3.08
2627 4863 5.598769 ACGCTGGTTGATTAGTATTACCTC 58.401 41.667 0.00 0.00 0.00 3.85
2628 4864 4.989168 CGCTGGTTGATTAGTATTACCTCC 59.011 45.833 0.00 0.00 0.00 4.30
2629 4865 4.989168 GCTGGTTGATTAGTATTACCTCCG 59.011 45.833 0.00 0.00 0.00 4.63
2630 4866 5.452917 GCTGGTTGATTAGTATTACCTCCGT 60.453 44.000 0.00 0.00 0.00 4.69
2632 4868 7.042797 TGGTTGATTAGTATTACCTCCGTAC 57.957 40.000 0.00 0.00 0.00 3.67
2633 4869 6.040842 TGGTTGATTAGTATTACCTCCGTACC 59.959 42.308 0.00 0.00 0.00 3.34
2634 4870 6.040842 GGTTGATTAGTATTACCTCCGTACCA 59.959 42.308 0.00 0.00 0.00 3.25
2635 4871 7.417797 GGTTGATTAGTATTACCTCCGTACCAA 60.418 40.741 0.00 0.00 0.00 3.67
2636 4872 7.658525 TGATTAGTATTACCTCCGTACCAAA 57.341 36.000 0.00 0.00 0.00 3.28
2637 4873 8.076910 TGATTAGTATTACCTCCGTACCAAAA 57.923 34.615 0.00 0.00 0.00 2.44
2638 4874 8.707449 TGATTAGTATTACCTCCGTACCAAAAT 58.293 33.333 0.00 0.00 0.00 1.82
2639 4875 9.551734 GATTAGTATTACCTCCGTACCAAAATT 57.448 33.333 0.00 0.00 0.00 1.82
2640 4876 8.947055 TTAGTATTACCTCCGTACCAAAATTC 57.053 34.615 0.00 0.00 0.00 2.17
2641 4877 7.191593 AGTATTACCTCCGTACCAAAATTCT 57.808 36.000 0.00 0.00 0.00 2.40
2642 4878 7.627311 AGTATTACCTCCGTACCAAAATTCTT 58.373 34.615 0.00 0.00 0.00 2.52
2643 4879 6.753107 ATTACCTCCGTACCAAAATTCTTG 57.247 37.500 0.00 0.00 0.00 3.02
2644 4880 4.094830 ACCTCCGTACCAAAATTCTTGT 57.905 40.909 0.00 0.00 0.00 3.16
2645 4881 4.070009 ACCTCCGTACCAAAATTCTTGTC 58.930 43.478 0.00 0.00 0.00 3.18
2646 4882 4.202430 ACCTCCGTACCAAAATTCTTGTCT 60.202 41.667 0.00 0.00 0.00 3.41
2647 4883 4.760204 CCTCCGTACCAAAATTCTTGTCTT 59.240 41.667 0.00 0.00 0.00 3.01
2648 4884 5.106673 CCTCCGTACCAAAATTCTTGTCTTC 60.107 44.000 0.00 0.00 0.00 2.87
2649 4885 4.449743 TCCGTACCAAAATTCTTGTCTTCG 59.550 41.667 0.00 0.00 0.00 3.79
2650 4886 4.212636 CCGTACCAAAATTCTTGTCTTCGT 59.787 41.667 0.00 0.00 0.00 3.85
2651 4887 5.137403 CGTACCAAAATTCTTGTCTTCGTG 58.863 41.667 0.00 0.00 0.00 4.35
2652 4888 5.277154 CGTACCAAAATTCTTGTCTTCGTGT 60.277 40.000 0.00 0.00 0.00 4.49
2653 4889 5.576447 ACCAAAATTCTTGTCTTCGTGTT 57.424 34.783 0.00 0.00 0.00 3.32
2654 4890 6.687081 ACCAAAATTCTTGTCTTCGTGTTA 57.313 33.333 0.00 0.00 0.00 2.41
2655 4891 6.725246 ACCAAAATTCTTGTCTTCGTGTTAG 58.275 36.000 0.00 0.00 0.00 2.34
2656 4892 6.540914 ACCAAAATTCTTGTCTTCGTGTTAGA 59.459 34.615 0.00 0.00 0.00 2.10
2657 4893 7.228706 ACCAAAATTCTTGTCTTCGTGTTAGAT 59.771 33.333 0.00 0.00 0.00 1.98
2658 4894 8.717821 CCAAAATTCTTGTCTTCGTGTTAGATA 58.282 33.333 0.00 0.00 0.00 1.98
2659 4895 9.530129 CAAAATTCTTGTCTTCGTGTTAGATAC 57.470 33.333 0.00 0.00 0.00 2.24
2660 4896 8.827177 AAATTCTTGTCTTCGTGTTAGATACA 57.173 30.769 0.00 0.00 0.00 2.29
2661 4897 9.436957 AAATTCTTGTCTTCGTGTTAGATACAT 57.563 29.630 0.00 0.00 39.39 2.29
2662 4898 8.635877 ATTCTTGTCTTCGTGTTAGATACATC 57.364 34.615 0.00 0.00 39.39 3.06
2663 4899 6.561614 TCTTGTCTTCGTGTTAGATACATCC 58.438 40.000 0.00 0.00 39.39 3.51
2664 4900 4.916870 TGTCTTCGTGTTAGATACATCCG 58.083 43.478 0.00 0.00 39.39 4.18
2665 4901 4.397103 TGTCTTCGTGTTAGATACATCCGT 59.603 41.667 0.00 0.00 39.39 4.69
2666 4902 5.585844 TGTCTTCGTGTTAGATACATCCGTA 59.414 40.000 0.00 0.00 39.39 4.02
2667 4903 6.261603 TGTCTTCGTGTTAGATACATCCGTAT 59.738 38.462 0.00 0.00 41.16 3.06
2684 4920 9.439500 ACATCCGTATCTAGACTAATCTAAGAC 57.561 37.037 0.00 0.00 36.98 3.01
2685 4921 9.438228 CATCCGTATCTAGACTAATCTAAGACA 57.562 37.037 0.00 0.00 36.98 3.41
2687 4923 9.491675 TCCGTATCTAGACTAATCTAAGACAAG 57.508 37.037 0.00 0.00 36.98 3.16
2688 4924 9.491675 CCGTATCTAGACTAATCTAAGACAAGA 57.508 37.037 0.00 0.00 36.98 3.02
2696 4932 8.097662 AGACTAATCTAAGACAAGAACTTTGGG 58.902 37.037 0.00 0.00 31.46 4.12
2697 4933 7.974504 ACTAATCTAAGACAAGAACTTTGGGA 58.025 34.615 0.00 0.00 0.00 4.37
2698 4934 8.606830 ACTAATCTAAGACAAGAACTTTGGGAT 58.393 33.333 0.00 0.00 0.00 3.85
2701 4937 7.792364 TCTAAGACAAGAACTTTGGGATAGA 57.208 36.000 0.00 0.00 0.00 1.98
2702 4938 7.841956 TCTAAGACAAGAACTTTGGGATAGAG 58.158 38.462 0.00 0.00 0.00 2.43
2703 4939 5.428184 AGACAAGAACTTTGGGATAGAGG 57.572 43.478 0.00 0.00 0.00 3.69
2704 4940 4.226168 AGACAAGAACTTTGGGATAGAGGG 59.774 45.833 0.00 0.00 0.00 4.30
2705 4941 4.175962 ACAAGAACTTTGGGATAGAGGGA 58.824 43.478 0.00 0.00 0.00 4.20
2706 4942 4.226168 ACAAGAACTTTGGGATAGAGGGAG 59.774 45.833 0.00 0.00 0.00 4.30
2718 4955 4.202223 GGATAGAGGGAGTACATTTTCGCA 60.202 45.833 0.00 0.00 0.00 5.10
2731 4968 6.012658 ACATTTTCGCAACAATGACATACT 57.987 33.333 5.89 0.00 34.89 2.12
2739 4976 4.581493 CAACAATGACATACTCGCATGAC 58.419 43.478 0.00 0.00 0.00 3.06
2782 5027 0.865769 CTTGTGTGTTACTGTCGGCC 59.134 55.000 0.00 0.00 0.00 6.13
2962 5255 0.878416 TTAACTTGCGACCATGCACC 59.122 50.000 0.00 0.00 46.25 5.01
3113 5419 9.681062 TCCAATCCTTGTAAGTAGGAAATTTAG 57.319 33.333 0.00 0.00 44.59 1.85
3114 5420 8.903820 CCAATCCTTGTAAGTAGGAAATTTAGG 58.096 37.037 0.00 0.00 44.59 2.69
3358 5771 5.429762 TCCATCCAGAGATTTGACAGGTAAT 59.570 40.000 0.00 0.00 0.00 1.89
3362 5775 6.778821 TCCAGAGATTTGACAGGTAATCAAA 58.221 36.000 2.89 2.89 46.96 2.69
3491 5905 8.915654 GTTCTTTGATCGTTGCTTTGATATTTT 58.084 29.630 0.00 0.00 0.00 1.82
3575 5989 2.031258 TCGACAACAACTCTTGCCAA 57.969 45.000 0.00 0.00 0.00 4.52
3598 6018 7.374272 CAACCAACAAAAAGGGAAAACAATTT 58.626 30.769 0.00 0.00 0.00 1.82
3611 6031 8.201464 AGGGAAAACAATTTTAAGATTGTCGTT 58.799 29.630 20.91 17.69 46.53 3.85
3613 6033 9.631639 GGAAAACAATTTTAAGATTGTCGTTTG 57.368 29.630 20.91 0.00 46.53 2.93
3677 6100 7.009999 GCACTTGTAGTACTTCTGATTCTCATG 59.990 40.741 0.00 0.00 0.00 3.07
3762 6228 3.059166 CAAAGCAAGCAACAATGGGTAC 58.941 45.455 0.00 0.00 0.00 3.34
4251 6742 9.058174 TCTAGAAGATAAACTCAGAGGTATTCG 57.942 37.037 1.53 0.00 0.00 3.34
4409 6960 5.362263 TCCGCACAAGGTATACTTTAATCC 58.638 41.667 2.25 0.00 37.29 3.01
4499 7054 7.655490 TGTGTGACTGATATATCATCTCTGTG 58.345 38.462 15.71 5.26 36.02 3.66
4616 7171 7.153985 TGAATAAAAATCTTGAGGCCAAAGTG 58.846 34.615 5.01 0.00 0.00 3.16
4909 7470 3.059325 ACGTATATAGCTTCGGTGTCGTC 60.059 47.826 0.00 0.00 37.69 4.20
5301 7865 5.712917 GGTCAATGTTATTTGTTGGTAGGGA 59.287 40.000 0.00 0.00 0.00 4.20
5455 8019 4.543689 ACCCATCTTCATCGAACCTAGTA 58.456 43.478 0.00 0.00 0.00 1.82
5459 8023 6.072397 CCCATCTTCATCGAACCTAGTACTAG 60.072 46.154 21.11 21.11 0.00 2.57
5470 8034 6.817641 CGAACCTAGTACTAGACTGAGAGAAA 59.182 42.308 28.07 0.00 39.39 2.52
5568 8134 9.928236 GCTAAGATTGAAGCTATAGAAAAGTTG 57.072 33.333 3.21 0.00 35.80 3.16
5690 8256 1.597742 GCGCCAACCATGATCACTAT 58.402 50.000 0.00 0.00 0.00 2.12
5780 8347 6.943981 TGATTCTGTAGTTCTTTGTTTGACG 58.056 36.000 0.00 0.00 0.00 4.35
5793 8360 2.223618 TGTTTGACGCTAAAGGTTTGCC 60.224 45.455 0.00 0.00 0.00 4.52
5804 8371 5.392595 GCTAAAGGTTTGCCGATTTCACATA 60.393 40.000 0.00 0.00 40.50 2.29
5805 8372 5.659440 AAAGGTTTGCCGATTTCACATAT 57.341 34.783 0.00 0.00 40.50 1.78
5843 8410 7.725251 TGAACATGTTTTATTTCTTGGAGCTT 58.275 30.769 13.36 0.00 0.00 3.74
5904 8471 8.730680 ACATGTTTAACTGATTCATGACCTAAC 58.269 33.333 0.00 0.00 39.07 2.34
5906 8473 8.322906 TGTTTAACTGATTCATGACCTAACTG 57.677 34.615 0.00 0.00 0.00 3.16
5952 8519 9.953697 GTTATAGTGATCGAGAGTCATAGTTTT 57.046 33.333 0.00 0.00 0.00 2.43
6005 8755 5.105513 TGTCAGTGTTCTCGCAATAGGATTA 60.106 40.000 0.00 0.00 0.00 1.75
6013 8763 6.174720 TCTCGCAATAGGATTAGGACATTT 57.825 37.500 0.00 0.00 0.00 2.32
6103 8853 6.486253 TTGCACTCTACATGTCAAGAAATC 57.514 37.500 0.00 0.00 0.00 2.17
6104 8854 5.798132 TGCACTCTACATGTCAAGAAATCT 58.202 37.500 0.00 0.00 0.00 2.40
6105 8855 6.935167 TGCACTCTACATGTCAAGAAATCTA 58.065 36.000 0.00 0.00 0.00 1.98
6106 8856 7.559486 TGCACTCTACATGTCAAGAAATCTAT 58.441 34.615 0.00 0.00 0.00 1.98
6107 8857 8.695456 TGCACTCTACATGTCAAGAAATCTATA 58.305 33.333 0.00 0.00 0.00 1.31
6108 8858 8.973378 GCACTCTACATGTCAAGAAATCTATAC 58.027 37.037 0.00 0.00 0.00 1.47
6109 8859 9.469807 CACTCTACATGTCAAGAAATCTATACC 57.530 37.037 0.00 0.00 0.00 2.73
6110 8860 9.201989 ACTCTACATGTCAAGAAATCTATACCA 57.798 33.333 0.00 0.00 0.00 3.25
6141 8891 3.621419 CCAAAGGGGCAGATCCAAT 57.379 52.632 0.00 0.00 36.21 3.16
6142 8892 1.870064 CCAAAGGGGCAGATCCAATT 58.130 50.000 0.00 0.00 36.21 2.32
6143 8893 3.030873 CCAAAGGGGCAGATCCAATTA 57.969 47.619 0.00 0.00 36.21 1.40
6144 8894 3.373830 CCAAAGGGGCAGATCCAATTAA 58.626 45.455 0.00 0.00 36.21 1.40
6145 8895 3.969312 CCAAAGGGGCAGATCCAATTAAT 59.031 43.478 0.00 0.00 36.21 1.40
6146 8896 4.039609 CCAAAGGGGCAGATCCAATTAATC 59.960 45.833 0.00 0.00 36.21 1.75
6147 8897 4.821532 AAGGGGCAGATCCAATTAATCT 57.178 40.909 0.00 0.00 36.21 2.40
6148 8898 4.379302 AGGGGCAGATCCAATTAATCTC 57.621 45.455 0.62 0.00 36.21 2.75
6149 8899 3.077359 GGGGCAGATCCAATTAATCTCG 58.923 50.000 0.62 0.00 36.21 4.04
6150 8900 3.077359 GGGCAGATCCAATTAATCTCGG 58.923 50.000 0.62 0.00 36.21 4.63
6151 8901 2.485814 GGCAGATCCAATTAATCTCGGC 59.514 50.000 0.62 2.99 31.05 5.54
6152 8902 2.485814 GCAGATCCAATTAATCTCGGCC 59.514 50.000 0.00 0.00 31.05 6.13
6153 8903 3.743521 CAGATCCAATTAATCTCGGCCA 58.256 45.455 2.24 0.00 31.05 5.36
6154 8904 4.330250 CAGATCCAATTAATCTCGGCCAT 58.670 43.478 2.24 0.00 31.05 4.40
6155 8905 4.394300 CAGATCCAATTAATCTCGGCCATC 59.606 45.833 2.24 0.00 31.05 3.51
6156 8906 3.855255 TCCAATTAATCTCGGCCATCA 57.145 42.857 2.24 0.00 0.00 3.07
6157 8907 4.163441 TCCAATTAATCTCGGCCATCAA 57.837 40.909 2.24 0.00 0.00 2.57
6158 8908 4.531854 TCCAATTAATCTCGGCCATCAAA 58.468 39.130 2.24 0.00 0.00 2.69
6159 8909 5.139727 TCCAATTAATCTCGGCCATCAAAT 58.860 37.500 2.24 0.00 0.00 2.32
6160 8910 5.241506 TCCAATTAATCTCGGCCATCAAATC 59.758 40.000 2.24 0.00 0.00 2.17
6161 8911 5.009911 CCAATTAATCTCGGCCATCAAATCA 59.990 40.000 2.24 0.00 0.00 2.57
6162 8912 6.294899 CCAATTAATCTCGGCCATCAAATCAT 60.295 38.462 2.24 0.00 0.00 2.45
6163 8913 5.694231 TTAATCTCGGCCATCAAATCATG 57.306 39.130 2.24 0.00 0.00 3.07
6164 8914 2.715749 TCTCGGCCATCAAATCATGT 57.284 45.000 2.24 0.00 0.00 3.21
6165 8915 2.564771 TCTCGGCCATCAAATCATGTC 58.435 47.619 2.24 0.00 0.00 3.06
6166 8916 2.093021 TCTCGGCCATCAAATCATGTCA 60.093 45.455 2.24 0.00 0.00 3.58
6167 8917 2.684374 CTCGGCCATCAAATCATGTCAA 59.316 45.455 2.24 0.00 0.00 3.18
6168 8918 3.289836 TCGGCCATCAAATCATGTCAAT 58.710 40.909 2.24 0.00 0.00 2.57
6169 8919 3.316029 TCGGCCATCAAATCATGTCAATC 59.684 43.478 2.24 0.00 0.00 2.67
6170 8920 3.551454 CGGCCATCAAATCATGTCAATCC 60.551 47.826 2.24 0.00 0.00 3.01
6171 8921 3.385433 GGCCATCAAATCATGTCAATCCA 59.615 43.478 0.00 0.00 0.00 3.41
6172 8922 4.141892 GGCCATCAAATCATGTCAATCCAA 60.142 41.667 0.00 0.00 0.00 3.53
6173 8923 4.807304 GCCATCAAATCATGTCAATCCAAC 59.193 41.667 0.00 0.00 0.00 3.77
6174 8924 5.038683 CCATCAAATCATGTCAATCCAACG 58.961 41.667 0.00 0.00 0.00 4.10
6175 8925 5.163632 CCATCAAATCATGTCAATCCAACGA 60.164 40.000 0.00 0.00 0.00 3.85
6176 8926 5.295431 TCAAATCATGTCAATCCAACGAC 57.705 39.130 0.00 0.00 0.00 4.34
6177 8927 4.155826 TCAAATCATGTCAATCCAACGACC 59.844 41.667 0.00 0.00 0.00 4.79
6178 8928 3.634397 ATCATGTCAATCCAACGACCT 57.366 42.857 0.00 0.00 0.00 3.85
6179 8929 4.753516 ATCATGTCAATCCAACGACCTA 57.246 40.909 0.00 0.00 0.00 3.08
6180 8930 4.123497 TCATGTCAATCCAACGACCTAG 57.877 45.455 0.00 0.00 0.00 3.02
6181 8931 3.767131 TCATGTCAATCCAACGACCTAGA 59.233 43.478 0.00 0.00 0.00 2.43
6182 8932 3.587797 TGTCAATCCAACGACCTAGAC 57.412 47.619 0.00 0.00 0.00 2.59
6183 8933 3.162666 TGTCAATCCAACGACCTAGACT 58.837 45.455 0.00 0.00 0.00 3.24
6184 8934 3.056821 TGTCAATCCAACGACCTAGACTG 60.057 47.826 0.00 0.00 0.00 3.51
6185 8935 3.056749 GTCAATCCAACGACCTAGACTGT 60.057 47.826 0.00 0.00 0.00 3.55
6186 8936 3.576982 TCAATCCAACGACCTAGACTGTT 59.423 43.478 0.00 0.00 0.00 3.16
6187 8937 4.039973 TCAATCCAACGACCTAGACTGTTT 59.960 41.667 0.00 0.00 0.00 2.83
6188 8938 3.655276 TCCAACGACCTAGACTGTTTC 57.345 47.619 0.00 0.00 0.00 2.78
6189 8939 2.960384 TCCAACGACCTAGACTGTTTCA 59.040 45.455 0.00 0.00 0.00 2.69
6190 8940 3.385433 TCCAACGACCTAGACTGTTTCAA 59.615 43.478 0.00 0.00 0.00 2.69
6191 8941 4.039973 TCCAACGACCTAGACTGTTTCAAT 59.960 41.667 0.00 0.00 0.00 2.57
6192 8942 4.152402 CCAACGACCTAGACTGTTTCAATG 59.848 45.833 0.00 0.00 0.00 2.82
6193 8943 4.602340 ACGACCTAGACTGTTTCAATGT 57.398 40.909 0.00 0.00 0.00 2.71
6194 8944 4.557205 ACGACCTAGACTGTTTCAATGTC 58.443 43.478 0.00 0.00 0.00 3.06
6195 8945 3.608506 CGACCTAGACTGTTTCAATGTCG 59.391 47.826 0.00 0.00 35.56 4.35
6196 8946 4.615223 CGACCTAGACTGTTTCAATGTCGA 60.615 45.833 0.00 0.00 40.27 4.20
6197 8947 5.209818 ACCTAGACTGTTTCAATGTCGAA 57.790 39.130 0.00 0.00 36.01 3.71
6198 8948 4.989168 ACCTAGACTGTTTCAATGTCGAAC 59.011 41.667 0.00 0.00 36.01 3.95
6199 8949 4.090066 CCTAGACTGTTTCAATGTCGAACG 59.910 45.833 0.00 0.00 36.01 3.95
6200 8950 2.221055 AGACTGTTTCAATGTCGAACGC 59.779 45.455 0.00 0.00 36.01 4.84
6201 8951 2.210116 ACTGTTTCAATGTCGAACGCT 58.790 42.857 0.00 0.00 0.00 5.07
6202 8952 2.221055 ACTGTTTCAATGTCGAACGCTC 59.779 45.455 0.00 0.00 0.00 5.03
6203 8953 2.205911 TGTTTCAATGTCGAACGCTCA 58.794 42.857 0.00 0.00 0.00 4.26
6204 8954 2.609916 TGTTTCAATGTCGAACGCTCAA 59.390 40.909 0.00 0.00 0.00 3.02
6205 8955 2.941891 TTCAATGTCGAACGCTCAAC 57.058 45.000 0.00 0.00 0.00 3.18
6206 8956 1.859383 TCAATGTCGAACGCTCAACA 58.141 45.000 0.00 0.00 0.00 3.33
6207 8957 1.525197 TCAATGTCGAACGCTCAACAC 59.475 47.619 0.00 0.00 0.00 3.32
6208 8958 0.506932 AATGTCGAACGCTCAACACG 59.493 50.000 0.00 0.00 0.00 4.49
6229 8979 4.459606 CGTTTAGCGTGCAGTTAATTTCA 58.540 39.130 0.00 0.00 35.54 2.69
6230 8980 5.086058 CGTTTAGCGTGCAGTTAATTTCAT 58.914 37.500 0.00 0.00 35.54 2.57
6231 8981 5.002468 CGTTTAGCGTGCAGTTAATTTCATG 59.998 40.000 0.00 0.00 35.54 3.07
6232 8982 2.867429 AGCGTGCAGTTAATTTCATGC 58.133 42.857 6.69 6.69 40.63 4.06
6233 8983 1.919918 GCGTGCAGTTAATTTCATGCC 59.080 47.619 3.91 0.00 37.89 4.40
6234 8984 2.670789 GCGTGCAGTTAATTTCATGCCA 60.671 45.455 3.91 0.00 37.89 4.92
6235 8985 3.573598 CGTGCAGTTAATTTCATGCCAA 58.426 40.909 0.00 0.00 37.89 4.52
6236 8986 3.986572 CGTGCAGTTAATTTCATGCCAAA 59.013 39.130 0.00 0.00 37.89 3.28
6237 8987 4.626604 CGTGCAGTTAATTTCATGCCAAAT 59.373 37.500 0.00 0.00 37.89 2.32
6238 8988 5.804473 CGTGCAGTTAATTTCATGCCAAATA 59.196 36.000 0.00 0.00 37.89 1.40
6239 8989 6.476380 CGTGCAGTTAATTTCATGCCAAATAT 59.524 34.615 0.00 0.00 37.89 1.28
6240 8990 7.647318 CGTGCAGTTAATTTCATGCCAAATATA 59.353 33.333 0.00 0.00 37.89 0.86
6241 8991 8.971321 GTGCAGTTAATTTCATGCCAAATATAG 58.029 33.333 0.00 0.00 37.89 1.31
6242 8992 8.694540 TGCAGTTAATTTCATGCCAAATATAGT 58.305 29.630 6.13 0.00 37.89 2.12
6243 8993 8.971321 GCAGTTAATTTCATGCCAAATATAGTG 58.029 33.333 0.00 0.00 32.49 2.74
6244 8994 8.971321 CAGTTAATTTCATGCCAAATATAGTGC 58.029 33.333 0.00 0.00 0.00 4.40
6245 8995 8.917088 AGTTAATTTCATGCCAAATATAGTGCT 58.083 29.630 0.00 0.00 0.00 4.40
6249 8999 9.918630 AATTTCATGCCAAATATAGTGCTAATC 57.081 29.630 0.00 0.00 0.00 1.75
6250 9000 8.462589 TTTCATGCCAAATATAGTGCTAATCA 57.537 30.769 0.00 0.00 0.00 2.57
6251 9001 7.439157 TCATGCCAAATATAGTGCTAATCAC 57.561 36.000 0.00 0.00 45.98 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 3.557264 GGGGAGATTAGGATAAACTGCCG 60.557 52.174 9.96 0.00 39.39 5.69
97 98 4.005472 GCGGATTGCGATGAGGCG 62.005 66.667 0.29 0.00 35.06 5.52
242 243 9.571810 TCAAAATTATGTATGCACTCATGTTTC 57.428 29.630 13.53 0.00 34.22 2.78
347 348 9.993454 TGGATGACAAAATTCACATTTAATTGA 57.007 25.926 4.42 0.00 31.89 2.57
349 350 8.924691 CGTGGATGACAAAATTCACATTTAATT 58.075 29.630 0.00 0.00 36.02 1.40
350 351 7.063308 GCGTGGATGACAAAATTCACATTTAAT 59.937 33.333 0.00 0.00 36.02 1.40
351 352 6.364706 GCGTGGATGACAAAATTCACATTTAA 59.635 34.615 0.00 0.00 36.02 1.52
352 353 5.861251 GCGTGGATGACAAAATTCACATTTA 59.139 36.000 0.00 0.00 36.02 1.40
353 354 4.685628 GCGTGGATGACAAAATTCACATTT 59.314 37.500 0.00 0.00 36.02 2.32
354 355 4.236935 GCGTGGATGACAAAATTCACATT 58.763 39.130 0.00 0.00 36.02 2.71
355 356 3.255395 TGCGTGGATGACAAAATTCACAT 59.745 39.130 0.00 0.00 36.02 3.21
356 357 2.620585 TGCGTGGATGACAAAATTCACA 59.379 40.909 0.00 0.00 36.02 3.58
357 358 3.281341 TGCGTGGATGACAAAATTCAC 57.719 42.857 0.00 0.00 33.34 3.18
358 359 5.833406 ATATGCGTGGATGACAAAATTCA 57.167 34.783 0.00 0.00 0.00 2.57
359 360 6.959361 AGTATATGCGTGGATGACAAAATTC 58.041 36.000 0.00 0.00 0.00 2.17
360 361 6.942532 AGTATATGCGTGGATGACAAAATT 57.057 33.333 0.00 0.00 0.00 1.82
361 362 6.650807 CCTAGTATATGCGTGGATGACAAAAT 59.349 38.462 0.00 0.00 0.00 1.82
362 363 5.989168 CCTAGTATATGCGTGGATGACAAAA 59.011 40.000 0.00 0.00 0.00 2.44
363 364 5.069914 ACCTAGTATATGCGTGGATGACAAA 59.930 40.000 10.84 0.00 0.00 2.83
364 365 4.587262 ACCTAGTATATGCGTGGATGACAA 59.413 41.667 10.84 0.00 0.00 3.18
365 366 4.149598 ACCTAGTATATGCGTGGATGACA 58.850 43.478 10.84 0.00 0.00 3.58
366 367 4.380655 GGACCTAGTATATGCGTGGATGAC 60.381 50.000 10.84 0.00 0.00 3.06
367 368 3.762288 GGACCTAGTATATGCGTGGATGA 59.238 47.826 10.84 0.00 0.00 2.92
519 520 9.599866 TTACTATAGGGCAATGAATTATCATCG 57.400 33.333 4.43 0.00 45.60 3.84
637 638 8.260114 ACAAAATGAGGCCCTAAAATTATGAAG 58.740 33.333 0.00 0.00 0.00 3.02
753 754 2.479901 GCCTTAAGTAGACGACTGCCTC 60.480 54.545 0.97 0.00 38.87 4.70
756 757 2.943449 AGCCTTAAGTAGACGACTGC 57.057 50.000 0.97 0.00 38.87 4.40
811 815 3.751518 AGTTTGTCAACTTTCCGGCTAT 58.248 40.909 0.00 0.00 40.66 2.97
812 816 3.202829 AGTTTGTCAACTTTCCGGCTA 57.797 42.857 0.00 0.00 40.66 3.93
816 820 4.058817 AGAGCTAGTTTGTCAACTTTCCG 58.941 43.478 0.00 0.00 40.66 4.30
817 821 7.492352 TTAAGAGCTAGTTTGTCAACTTTCC 57.508 36.000 0.00 0.00 40.66 3.13
820 826 8.677148 TTGATTAAGAGCTAGTTTGTCAACTT 57.323 30.769 0.00 0.00 40.66 2.66
839 849 2.736721 GCGAGTGCAGTTGACTTGATTA 59.263 45.455 13.30 0.00 42.15 1.75
840 850 1.532868 GCGAGTGCAGTTGACTTGATT 59.467 47.619 13.30 0.00 42.15 2.57
859 869 0.438830 CTAGTTTTGGCGACGACTGC 59.561 55.000 0.65 0.00 0.00 4.40
919 930 2.418368 TAAGCTTGCCAGTGGTATGG 57.582 50.000 9.86 3.78 43.72 2.74
920 931 2.684881 CCTTAAGCTTGCCAGTGGTATG 59.315 50.000 9.86 9.96 0.00 2.39
947 981 8.200120 GCTAGGACAAGATATATGCATATGTCA 58.800 37.037 32.45 15.72 34.49 3.58
948 982 8.420222 AGCTAGGACAAGATATATGCATATGTC 58.580 37.037 27.23 27.23 32.87 3.06
949 983 8.316497 AGCTAGGACAAGATATATGCATATGT 57.684 34.615 26.21 20.88 0.00 2.29
950 984 9.689976 GTAGCTAGGACAAGATATATGCATATG 57.310 37.037 26.21 14.73 0.00 1.78
951 985 9.653516 AGTAGCTAGGACAAGATATATGCATAT 57.346 33.333 22.31 22.31 0.00 1.78
952 986 9.480861 AAGTAGCTAGGACAAGATATATGCATA 57.519 33.333 9.27 9.27 0.00 3.14
953 987 7.969690 AGTAGCTAGGACAAGATATATGCAT 57.030 36.000 3.79 3.79 0.00 3.96
956 990 7.973388 GCAGAAGTAGCTAGGACAAGATATATG 59.027 40.741 0.00 0.00 0.00 1.78
973 1039 0.326264 ACCTTGCCCAGCAGAAGTAG 59.674 55.000 0.00 0.00 40.61 2.57
979 1045 2.203538 ACCAACCTTGCCCAGCAG 60.204 61.111 0.00 0.00 40.61 4.24
981 1047 3.305516 CCACCAACCTTGCCCAGC 61.306 66.667 0.00 0.00 0.00 4.85
982 1048 3.305516 GCCACCAACCTTGCCCAG 61.306 66.667 0.00 0.00 0.00 4.45
983 1049 3.465218 ATGCCACCAACCTTGCCCA 62.465 57.895 0.00 0.00 0.00 5.36
984 1050 2.604382 ATGCCACCAACCTTGCCC 60.604 61.111 0.00 0.00 0.00 5.36
986 1052 1.005867 CACATGCCACCAACCTTGC 60.006 57.895 0.00 0.00 0.00 4.01
987 1053 1.005867 GCACATGCCACCAACCTTG 60.006 57.895 0.00 0.00 34.31 3.61
988 1054 2.563798 CGCACATGCCACCAACCTT 61.564 57.895 0.00 0.00 37.91 3.50
989 1055 2.985282 CGCACATGCCACCAACCT 60.985 61.111 0.00 0.00 37.91 3.50
1010 1076 2.589798 TCGCCGGACCATTTTACTAG 57.410 50.000 5.05 0.00 0.00 2.57
1016 1082 1.520787 GACGATCGCCGGACCATTT 60.521 57.895 16.60 0.00 43.93 2.32
1022 1088 3.433453 TCAACGACGATCGCCGGA 61.433 61.111 26.94 13.20 45.12 5.14
1067 1151 0.390124 AACTTGAAGTACACCGGCGA 59.610 50.000 9.30 0.00 0.00 5.54
1074 1158 0.947180 GGCCGCGAACTTGAAGTACA 60.947 55.000 8.23 0.00 0.00 2.90
1098 1182 1.378778 ACCTTCGAGACTAGGCGCT 60.379 57.895 7.64 0.00 34.79 5.92
1121 1205 7.010830 AGCGCATGCATATGATAATACTTGTAG 59.989 37.037 19.57 0.00 46.23 2.74
1143 1227 2.556287 CGGAGGAACACAAAGCGC 59.444 61.111 0.00 0.00 0.00 5.92
1144 1228 0.669318 TAGCGGAGGAACACAAAGCG 60.669 55.000 0.00 0.00 0.00 4.68
1145 1229 1.079503 CTAGCGGAGGAACACAAAGC 58.920 55.000 0.00 0.00 0.00 3.51
1146 1230 2.743636 TCTAGCGGAGGAACACAAAG 57.256 50.000 0.00 0.00 0.00 2.77
1147 1231 2.565391 TCATCTAGCGGAGGAACACAAA 59.435 45.455 0.00 0.00 31.40 2.83
1148 1232 2.176045 TCATCTAGCGGAGGAACACAA 58.824 47.619 0.00 0.00 31.40 3.33
1151 1235 3.432186 CCATTTCATCTAGCGGAGGAACA 60.432 47.826 8.77 3.32 43.17 3.18
1153 1237 2.104792 CCCATTTCATCTAGCGGAGGAA 59.895 50.000 5.90 5.90 42.03 3.36
1155 1239 1.417890 ACCCATTTCATCTAGCGGAGG 59.582 52.381 0.00 0.00 0.00 4.30
1156 1240 2.918712 ACCCATTTCATCTAGCGGAG 57.081 50.000 0.00 0.00 0.00 4.63
1157 1241 3.305720 ACTACCCATTTCATCTAGCGGA 58.694 45.455 0.00 0.00 0.00 5.54
1158 1242 3.753294 ACTACCCATTTCATCTAGCGG 57.247 47.619 0.00 0.00 0.00 5.52
1159 1243 4.238514 GCTACTACCCATTTCATCTAGCG 58.761 47.826 0.00 0.00 0.00 4.26
1161 1245 5.221263 ACACGCTACTACCCATTTCATCTAG 60.221 44.000 0.00 0.00 0.00 2.43
1163 1247 3.451178 ACACGCTACTACCCATTTCATCT 59.549 43.478 0.00 0.00 0.00 2.90
1164 1248 3.555956 CACACGCTACTACCCATTTCATC 59.444 47.826 0.00 0.00 0.00 2.92
1165 1249 3.055385 ACACACGCTACTACCCATTTCAT 60.055 43.478 0.00 0.00 0.00 2.57
1167 1251 2.968675 ACACACGCTACTACCCATTTC 58.031 47.619 0.00 0.00 0.00 2.17
1168 1252 3.071479 CAACACACGCTACTACCCATTT 58.929 45.455 0.00 0.00 0.00 2.32
1170 1254 1.066430 CCAACACACGCTACTACCCAT 60.066 52.381 0.00 0.00 0.00 4.00
1171 1255 0.319083 CCAACACACGCTACTACCCA 59.681 55.000 0.00 0.00 0.00 4.51
1172 1256 1.017701 GCCAACACACGCTACTACCC 61.018 60.000 0.00 0.00 0.00 3.69
1173 1257 0.037605 AGCCAACACACGCTACTACC 60.038 55.000 0.00 0.00 32.26 3.18
1174 1258 1.068474 CAGCCAACACACGCTACTAC 58.932 55.000 0.00 0.00 32.92 2.73
1175 1259 0.669318 GCAGCCAACACACGCTACTA 60.669 55.000 0.00 0.00 32.92 1.82
1176 1260 1.961277 GCAGCCAACACACGCTACT 60.961 57.895 0.00 0.00 32.92 2.57
1177 1261 1.507141 AAGCAGCCAACACACGCTAC 61.507 55.000 0.00 0.00 32.92 3.58
1178 1262 1.227823 AAGCAGCCAACACACGCTA 60.228 52.632 0.00 0.00 32.92 4.26
1179 1263 2.516930 AAGCAGCCAACACACGCT 60.517 55.556 0.00 0.00 35.10 5.07
1184 1328 0.380378 TTTGACGAAGCAGCCAACAC 59.620 50.000 0.00 0.00 0.00 3.32
1186 1330 1.537202 AGATTTGACGAAGCAGCCAAC 59.463 47.619 0.00 0.00 0.00 3.77
1190 1334 3.001736 GGATGTAGATTTGACGAAGCAGC 59.998 47.826 0.00 0.00 0.00 5.25
1191 1335 3.243877 CGGATGTAGATTTGACGAAGCAG 59.756 47.826 0.00 0.00 0.00 4.24
1193 1337 3.187700 ACGGATGTAGATTTGACGAAGC 58.812 45.455 0.00 0.00 0.00 3.86
1194 1338 4.436847 CGTACGGATGTAGATTTGACGAAG 59.563 45.833 7.57 0.00 0.00 3.79
1197 1341 3.688272 ACGTACGGATGTAGATTTGACG 58.312 45.455 21.06 0.00 0.00 4.35
1217 1361 3.334078 CATTGCTCAATGCGGGAAC 57.666 52.632 9.35 0.00 46.63 3.62
1289 1441 1.021390 GCACGGATCTTGGTGACAGG 61.021 60.000 13.70 0.00 44.54 4.00
1290 1442 1.021390 GGCACGGATCTTGGTGACAG 61.021 60.000 13.70 0.00 41.87 3.51
1305 1457 3.490759 CAGCGTCCGACATGGCAC 61.491 66.667 0.00 0.00 37.80 5.01
1306 1458 4.758251 CCAGCGTCCGACATGGCA 62.758 66.667 0.00 0.00 37.80 4.92
1308 1460 3.958147 AAGCCAGCGTCCGACATGG 62.958 63.158 13.26 13.26 40.09 3.66
1311 1463 3.611674 TGAAGCCAGCGTCCGACA 61.612 61.111 3.12 0.00 0.00 4.35
1312 1464 3.112709 GTGAAGCCAGCGTCCGAC 61.113 66.667 3.12 0.00 0.00 4.79
1385 1537 0.820482 ACGTTGTGGTAGTTTGGGGC 60.820 55.000 0.00 0.00 0.00 5.80
1389 1541 0.656205 GCGCACGTTGTGGTAGTTTG 60.656 55.000 0.30 0.00 33.64 2.93
1398 1556 3.649986 GGAAGCTGCGCACGTTGT 61.650 61.111 5.66 0.00 0.00 3.32
1462 1626 1.517832 CCGGAGCAGGTACTTGGAG 59.482 63.158 7.15 0.00 34.60 3.86
1595 1762 2.202987 GGCGATGACCTCAGCCTG 60.203 66.667 0.00 0.00 45.67 4.85
1596 1763 3.842923 CGGCGATGACCTCAGCCT 61.843 66.667 0.00 0.00 46.85 4.58
1600 1767 1.374125 CACAACGGCGATGACCTCA 60.374 57.895 24.15 0.00 0.00 3.86
1615 1782 2.910479 ACCGAGTCGTCCAGCACA 60.910 61.111 12.31 0.00 0.00 4.57
1618 1785 4.357947 TGCACCGAGTCGTCCAGC 62.358 66.667 12.31 9.92 0.00 4.85
1620 1787 3.680786 CCTGCACCGAGTCGTCCA 61.681 66.667 12.31 4.45 0.00 4.02
1654 1821 1.202099 TAAATGGTGTCCCGGAGCCA 61.202 55.000 0.73 11.84 35.28 4.75
1666 1833 2.175715 GGCCAAGGAGGAGATAAATGGT 59.824 50.000 0.00 0.00 41.22 3.55
1687 1854 0.906756 TGTTCTCCAGAGGCCTCAGG 60.907 60.000 33.12 33.12 37.58 3.86
1748 1915 1.626654 CCCATGTTGCGTCTGTCGAC 61.627 60.000 9.11 9.11 42.86 4.20
1795 1962 5.559427 TCGAAATCCCAATATGTGTTGTG 57.441 39.130 0.00 0.00 0.00 3.33
1796 1963 5.105917 GGTTCGAAATCCCAATATGTGTTGT 60.106 40.000 0.00 0.00 0.00 3.32
1800 1967 4.498009 GCTGGTTCGAAATCCCAATATGTG 60.498 45.833 0.00 0.00 0.00 3.21
1801 1968 3.632145 GCTGGTTCGAAATCCCAATATGT 59.368 43.478 0.00 0.00 0.00 2.29
1802 1969 3.303990 CGCTGGTTCGAAATCCCAATATG 60.304 47.826 0.00 0.00 0.00 1.78
1803 1970 2.878406 CGCTGGTTCGAAATCCCAATAT 59.122 45.455 0.00 0.00 0.00 1.28
1809 1976 1.012486 ACGTCGCTGGTTCGAAATCC 61.012 55.000 0.00 0.00 40.43 3.01
1813 1980 3.033764 GCACGTCGCTGGTTCGAA 61.034 61.111 0.00 0.00 40.43 3.71
1814 1981 3.567478 ATGCACGTCGCTGGTTCGA 62.567 57.895 10.54 0.00 43.06 3.71
1815 1982 3.071459 GATGCACGTCGCTGGTTCG 62.071 63.158 10.54 0.00 43.06 3.95
1817 1984 1.301716 AAGATGCACGTCGCTGGTT 60.302 52.632 10.54 0.57 43.06 3.67
1819 1986 0.735978 TACAAGATGCACGTCGCTGG 60.736 55.000 10.54 0.00 43.06 4.85
1820 1987 0.642291 CTACAAGATGCACGTCGCTG 59.358 55.000 10.54 4.23 43.06 5.18
1821 1988 0.458543 CCTACAAGATGCACGTCGCT 60.459 55.000 10.54 0.00 43.06 4.93
1822 1989 1.421410 CCCTACAAGATGCACGTCGC 61.421 60.000 0.00 3.44 42.89 5.19
1824 1991 1.090052 GCCCCTACAAGATGCACGTC 61.090 60.000 0.00 0.00 0.00 4.34
1825 1992 1.078426 GCCCCTACAAGATGCACGT 60.078 57.895 0.00 0.00 0.00 4.49
1826 1993 1.078497 TGCCCCTACAAGATGCACG 60.078 57.895 0.00 0.00 0.00 5.34
1827 1994 1.379642 GCTGCCCCTACAAGATGCAC 61.380 60.000 0.00 0.00 0.00 4.57
1830 1997 0.465097 CCAGCTGCCCCTACAAGATG 60.465 60.000 8.66 0.00 0.00 2.90
1832 1999 1.229496 TCCAGCTGCCCCTACAAGA 60.229 57.895 8.66 0.00 0.00 3.02
1833 2000 1.078143 GTCCAGCTGCCCCTACAAG 60.078 63.158 8.66 0.00 0.00 3.16
1834 2001 1.422977 TTGTCCAGCTGCCCCTACAA 61.423 55.000 8.66 10.00 0.00 2.41
1836 2003 1.377333 GTTGTCCAGCTGCCCCTAC 60.377 63.158 8.66 1.43 0.00 3.18
1837 2004 2.602676 GGTTGTCCAGCTGCCCCTA 61.603 63.158 8.66 0.00 0.00 3.53
1840 2007 2.985847 GTGGTTGTCCAGCTGCCC 60.986 66.667 8.66 0.48 45.24 5.36
1848 2015 1.021390 CATCGCTCTGGTGGTTGTCC 61.021 60.000 0.00 0.00 0.00 4.02
1849 2016 0.037326 TCATCGCTCTGGTGGTTGTC 60.037 55.000 0.00 0.00 0.00 3.18
1851 2018 1.012086 CATCATCGCTCTGGTGGTTG 58.988 55.000 0.00 0.00 0.00 3.77
1852 2019 0.904649 TCATCATCGCTCTGGTGGTT 59.095 50.000 0.00 0.00 0.00 3.67
1853 2020 1.126488 ATCATCATCGCTCTGGTGGT 58.874 50.000 0.00 0.00 0.00 4.16
1854 2021 2.141517 GAATCATCATCGCTCTGGTGG 58.858 52.381 0.00 0.00 0.00 4.61
1857 2024 2.830104 TGTGAATCATCATCGCTCTGG 58.170 47.619 0.00 0.00 38.01 3.86
1858 2025 4.986659 TGTATGTGAATCATCATCGCTCTG 59.013 41.667 2.51 0.00 38.01 3.35
1859 2026 4.987285 GTGTATGTGAATCATCATCGCTCT 59.013 41.667 2.51 0.00 38.01 4.09
1861 2028 4.696455 TGTGTATGTGAATCATCATCGCT 58.304 39.130 2.51 0.00 38.01 4.93
1863 2030 8.173130 CCAATATGTGTATGTGAATCATCATCG 58.827 37.037 2.51 0.00 38.01 3.84
1866 2033 9.492973 CTACCAATATGTGTATGTGAATCATCA 57.507 33.333 0.00 0.00 37.91 3.07
1867 2034 8.939929 CCTACCAATATGTGTATGTGAATCATC 58.060 37.037 0.00 0.00 37.91 2.92
1869 2036 7.714813 CACCTACCAATATGTGTATGTGAATCA 59.285 37.037 11.61 0.00 36.36 2.57
1870 2037 7.307989 GCACCTACCAATATGTGTATGTGAATC 60.308 40.741 17.18 4.19 36.36 2.52
1871 2038 6.486657 GCACCTACCAATATGTGTATGTGAAT 59.513 38.462 17.18 0.00 36.36 2.57
1872 2039 5.820423 GCACCTACCAATATGTGTATGTGAA 59.180 40.000 17.18 0.00 36.36 3.18
1874 2041 5.122519 TGCACCTACCAATATGTGTATGTG 58.877 41.667 12.24 12.24 36.94 3.21
1876 2043 7.386059 TCTATGCACCTACCAATATGTGTATG 58.614 38.462 0.00 0.00 34.66 2.39
1880 2220 5.470098 GGTTCTATGCACCTACCAATATGTG 59.530 44.000 0.00 0.00 31.91 3.21
1885 2225 2.769663 TCGGTTCTATGCACCTACCAAT 59.230 45.455 0.00 0.00 31.32 3.16
1889 2229 3.793559 ACAATCGGTTCTATGCACCTAC 58.206 45.455 0.00 0.00 31.32 3.18
1898 2238 5.182380 GGACCAAATGAAACAATCGGTTCTA 59.818 40.000 0.00 0.00 39.29 2.10
1904 2244 9.072294 GTTAATTAGGACCAAATGAAACAATCG 57.928 33.333 0.00 0.00 0.00 3.34
2030 2385 2.036475 GAGGCTGCCGATATTCTCTTGA 59.964 50.000 13.96 0.00 0.00 3.02
2063 2424 2.503546 TGCAACACAGCAGACGGA 59.496 55.556 0.00 0.00 40.11 4.69
2095 2456 0.598562 GGACTCAGAGTCGTTGAGCA 59.401 55.000 21.98 0.00 45.96 4.26
2108 2469 0.536687 ACTCGACGGTCTTGGACTCA 60.537 55.000 6.57 0.00 32.47 3.41
2145 2506 1.601419 ATTCGGTCGACGTGGTCCAT 61.601 55.000 9.92 0.00 44.69 3.41
2247 2638 3.309954 GGGCGTTGCTCTCATTAGTTTAG 59.690 47.826 0.00 0.00 0.00 1.85
2283 4358 0.042188 CGGCGAAATACAAGATGGCG 60.042 55.000 0.00 0.00 38.96 5.69
2376 4460 1.033746 CGACGAGGTACTTGGGCCTA 61.034 60.000 4.53 0.00 46.15 3.93
2410 4527 2.752903 AGCATTCGTGGGGTTTAACATC 59.247 45.455 0.00 0.00 0.00 3.06
2427 4544 0.036164 TGTTGTACCGGCTCAAGCAT 59.964 50.000 0.00 0.00 44.36 3.79
2558 4720 7.099120 GTGAAACTAAATAAGGTCCCGTAGAA 58.901 38.462 0.00 0.00 0.00 2.10
2605 4839 4.989168 GGAGGTAATACTAATCAACCAGCG 59.011 45.833 0.00 0.00 32.43 5.18
2623 4859 4.070009 GACAAGAATTTTGGTACGGAGGT 58.930 43.478 0.00 0.00 0.00 3.85
2624 4860 4.324267 AGACAAGAATTTTGGTACGGAGG 58.676 43.478 0.00 0.00 0.00 4.30
2625 4861 5.389516 CGAAGACAAGAATTTTGGTACGGAG 60.390 44.000 0.00 0.00 0.00 4.63
2626 4862 4.449743 CGAAGACAAGAATTTTGGTACGGA 59.550 41.667 0.00 0.00 0.00 4.69
2627 4863 4.212636 ACGAAGACAAGAATTTTGGTACGG 59.787 41.667 0.00 0.00 0.00 4.02
2628 4864 5.137403 CACGAAGACAAGAATTTTGGTACG 58.863 41.667 0.00 0.00 0.00 3.67
2629 4865 6.056428 ACACGAAGACAAGAATTTTGGTAC 57.944 37.500 0.00 0.00 0.00 3.34
2630 4866 6.687081 AACACGAAGACAAGAATTTTGGTA 57.313 33.333 0.00 0.00 0.00 3.25
2632 4868 6.954944 TCTAACACGAAGACAAGAATTTTGG 58.045 36.000 0.00 0.00 0.00 3.28
2633 4869 9.530129 GTATCTAACACGAAGACAAGAATTTTG 57.470 33.333 0.00 0.00 0.00 2.44
2634 4870 9.268268 TGTATCTAACACGAAGACAAGAATTTT 57.732 29.630 0.00 0.00 31.43 1.82
2635 4871 8.827177 TGTATCTAACACGAAGACAAGAATTT 57.173 30.769 0.00 0.00 31.43 1.82
2636 4872 9.088512 GATGTATCTAACACGAAGACAAGAATT 57.911 33.333 0.00 0.00 42.09 2.17
2637 4873 7.707035 GGATGTATCTAACACGAAGACAAGAAT 59.293 37.037 0.00 0.00 42.09 2.40
2638 4874 7.033791 GGATGTATCTAACACGAAGACAAGAA 58.966 38.462 0.00 0.00 42.09 2.52
2639 4875 6.561614 GGATGTATCTAACACGAAGACAAGA 58.438 40.000 0.00 0.00 42.09 3.02
2640 4876 5.455849 CGGATGTATCTAACACGAAGACAAG 59.544 44.000 0.00 0.00 42.09 3.16
2641 4877 5.106038 ACGGATGTATCTAACACGAAGACAA 60.106 40.000 0.00 0.00 42.09 3.18
2642 4878 4.397103 ACGGATGTATCTAACACGAAGACA 59.603 41.667 0.00 0.00 42.09 3.41
2643 4879 4.918037 ACGGATGTATCTAACACGAAGAC 58.082 43.478 0.00 0.00 42.09 3.01
2644 4880 6.872628 ATACGGATGTATCTAACACGAAGA 57.127 37.500 0.00 0.00 42.09 2.87
2658 4894 9.439500 GTCTTAGATTAGTCTAGATACGGATGT 57.561 37.037 0.00 0.00 38.17 3.06
2659 4895 9.438228 TGTCTTAGATTAGTCTAGATACGGATG 57.562 37.037 0.00 0.00 38.17 3.51
2661 4897 9.491675 CTTGTCTTAGATTAGTCTAGATACGGA 57.508 37.037 0.00 0.00 38.17 4.69
2662 4898 9.491675 TCTTGTCTTAGATTAGTCTAGATACGG 57.508 37.037 0.00 0.00 38.17 4.02
2670 4906 8.097662 CCCAAAGTTCTTGTCTTAGATTAGTCT 58.902 37.037 0.00 0.00 38.52 3.24
2671 4907 8.095169 TCCCAAAGTTCTTGTCTTAGATTAGTC 58.905 37.037 0.00 0.00 0.00 2.59
2672 4908 7.974504 TCCCAAAGTTCTTGTCTTAGATTAGT 58.025 34.615 0.00 0.00 0.00 2.24
2675 4911 8.826765 TCTATCCCAAAGTTCTTGTCTTAGATT 58.173 33.333 0.00 0.00 0.00 2.40
2676 4912 8.380742 TCTATCCCAAAGTTCTTGTCTTAGAT 57.619 34.615 0.00 0.00 0.00 1.98
2677 4913 7.093289 CCTCTATCCCAAAGTTCTTGTCTTAGA 60.093 40.741 0.00 0.00 0.00 2.10
2678 4914 7.044798 CCTCTATCCCAAAGTTCTTGTCTTAG 58.955 42.308 0.00 0.00 0.00 2.18
2679 4915 6.070194 CCCTCTATCCCAAAGTTCTTGTCTTA 60.070 42.308 0.00 0.00 0.00 2.10
2680 4916 5.280727 CCCTCTATCCCAAAGTTCTTGTCTT 60.281 44.000 0.00 0.00 0.00 3.01
2681 4917 4.226168 CCCTCTATCCCAAAGTTCTTGTCT 59.774 45.833 0.00 0.00 0.00 3.41
2682 4918 4.225267 TCCCTCTATCCCAAAGTTCTTGTC 59.775 45.833 0.00 0.00 0.00 3.18
2683 4919 4.175962 TCCCTCTATCCCAAAGTTCTTGT 58.824 43.478 0.00 0.00 0.00 3.16
2684 4920 4.226168 ACTCCCTCTATCCCAAAGTTCTTG 59.774 45.833 0.00 0.00 0.00 3.02
2685 4921 4.439860 ACTCCCTCTATCCCAAAGTTCTT 58.560 43.478 0.00 0.00 0.00 2.52
2686 4922 4.081695 ACTCCCTCTATCCCAAAGTTCT 57.918 45.455 0.00 0.00 0.00 3.01
2687 4923 4.715297 TGTACTCCCTCTATCCCAAAGTTC 59.285 45.833 0.00 0.00 0.00 3.01
2688 4924 4.695606 TGTACTCCCTCTATCCCAAAGTT 58.304 43.478 0.00 0.00 0.00 2.66
2689 4925 4.348020 TGTACTCCCTCTATCCCAAAGT 57.652 45.455 0.00 0.00 0.00 2.66
2690 4926 5.896073 AATGTACTCCCTCTATCCCAAAG 57.104 43.478 0.00 0.00 0.00 2.77
2691 4927 6.631766 CGAAAATGTACTCCCTCTATCCCAAA 60.632 42.308 0.00 0.00 0.00 3.28
2692 4928 5.163343 CGAAAATGTACTCCCTCTATCCCAA 60.163 44.000 0.00 0.00 0.00 4.12
2693 4929 4.344102 CGAAAATGTACTCCCTCTATCCCA 59.656 45.833 0.00 0.00 0.00 4.37
2694 4930 4.799917 GCGAAAATGTACTCCCTCTATCCC 60.800 50.000 0.00 0.00 0.00 3.85
2695 4931 4.202223 TGCGAAAATGTACTCCCTCTATCC 60.202 45.833 0.00 0.00 0.00 2.59
2696 4932 4.945246 TGCGAAAATGTACTCCCTCTATC 58.055 43.478 0.00 0.00 0.00 2.08
2697 4933 5.116882 GTTGCGAAAATGTACTCCCTCTAT 58.883 41.667 0.00 0.00 0.00 1.98
2698 4934 4.020928 TGTTGCGAAAATGTACTCCCTCTA 60.021 41.667 0.00 0.00 0.00 2.43
2699 4935 3.244422 TGTTGCGAAAATGTACTCCCTCT 60.244 43.478 0.00 0.00 0.00 3.69
2700 4936 3.071479 TGTTGCGAAAATGTACTCCCTC 58.929 45.455 0.00 0.00 0.00 4.30
2701 4937 3.134574 TGTTGCGAAAATGTACTCCCT 57.865 42.857 0.00 0.00 0.00 4.20
2702 4938 3.907894 TTGTTGCGAAAATGTACTCCC 57.092 42.857 0.00 0.00 0.00 4.30
2703 4939 4.851558 GTCATTGTTGCGAAAATGTACTCC 59.148 41.667 15.27 0.00 35.66 3.85
2704 4940 5.448438 TGTCATTGTTGCGAAAATGTACTC 58.552 37.500 15.27 6.85 35.66 2.59
2705 4941 5.431420 TGTCATTGTTGCGAAAATGTACT 57.569 34.783 15.27 0.00 35.66 2.73
2706 4942 7.021196 AGTATGTCATTGTTGCGAAAATGTAC 58.979 34.615 15.27 10.98 35.66 2.90
2718 4955 3.623060 GGTCATGCGAGTATGTCATTGTT 59.377 43.478 0.00 0.00 0.00 2.83
2731 4968 2.362397 GGAGTAATCAGAGGTCATGCGA 59.638 50.000 0.00 0.00 0.00 5.10
2739 4976 5.799213 ACAAAGAAGTGGAGTAATCAGAGG 58.201 41.667 0.00 0.00 0.00 3.69
2962 5255 5.611128 TCCTCATTTTGGAGAGATCTCTG 57.389 43.478 29.81 14.07 42.48 3.35
3113 5419 7.671495 AGCAAAATTATTGTGAAAATGGACC 57.329 32.000 0.00 0.00 0.00 4.46
3114 5420 8.872845 CCTAGCAAAATTATTGTGAAAATGGAC 58.127 33.333 0.00 0.00 0.00 4.02
3491 5905 4.415596 ACCATTAGCAATTTTGACCAGGA 58.584 39.130 0.00 0.00 0.00 3.86
3575 5989 7.531857 AAAATTGTTTTCCCTTTTTGTTGGT 57.468 28.000 0.00 0.00 0.00 3.67
3598 6018 9.440784 GAACAACAATACAAACGACAATCTTAA 57.559 29.630 0.00 0.00 0.00 1.85
3611 6031 5.390040 CGCAACTATCGGAACAACAATACAA 60.390 40.000 0.00 0.00 0.00 2.41
3613 6033 4.574759 CGCAACTATCGGAACAACAATAC 58.425 43.478 0.00 0.00 0.00 1.89
4251 6742 2.488545 TGCTCTTCTTACAGACGGACTC 59.511 50.000 0.00 0.00 0.00 3.36
4352 6871 0.324275 AGAGCCTCTGTCTCCAGGTC 60.324 60.000 0.00 0.00 39.31 3.85
4409 6960 5.590259 ACAATGAAAGGAAGACCATAATCCG 59.410 40.000 0.00 0.00 38.31 4.18
4499 7054 2.230508 CCCTGCATGCACATCATATTCC 59.769 50.000 18.46 0.00 33.19 3.01
4616 7171 3.518590 CTTCATCAAGCCAAAATCAGCC 58.481 45.455 0.00 0.00 0.00 4.85
4909 7470 4.466370 TGTCCTGTGATTACCTCCAGTAAG 59.534 45.833 0.00 0.00 44.07 2.34
5301 7865 2.240414 TGACTGATGATCATGGTTGGCT 59.760 45.455 14.30 0.00 0.00 4.75
5455 8019 5.022787 AGAAGGCATTTCTCTCAGTCTAGT 58.977 41.667 0.00 0.00 42.54 2.57
5470 8034 1.278985 TCGTTCACCATGAGAAGGCAT 59.721 47.619 12.70 0.00 32.53 4.40
5568 8134 4.881273 TGGTTTGTACATAGTGATCATGGC 59.119 41.667 0.00 0.00 0.00 4.40
5623 8189 6.998968 TGCTTCAAAACACATTTGGAAAAT 57.001 29.167 1.52 0.00 46.85 1.82
5762 8329 6.238266 CCTTTAGCGTCAAACAAAGAACTACA 60.238 38.462 0.00 0.00 31.11 2.74
5780 8347 3.242518 GTGAAATCGGCAAACCTTTAGC 58.757 45.455 0.00 0.00 0.00 3.09
5793 8360 8.748582 CAATGGAAAATGTCATATGTGAAATCG 58.251 33.333 1.90 0.00 35.80 3.34
5843 8410 8.726068 TCATGAAATAATGTTTGAGCTAACGAA 58.274 29.630 0.00 0.00 0.00 3.85
5906 8473 1.668419 CACACCATACTTGCTAGGGC 58.332 55.000 0.00 0.00 39.26 5.19
5952 8519 5.284861 TGCACACTAAGAAACCAGAAGTA 57.715 39.130 0.00 0.00 0.00 2.24
6005 8755 6.150140 GCTAAAGAGATTGTCACAAATGTCCT 59.850 38.462 0.00 0.00 31.79 3.85
6013 8763 6.863275 TCTTATCGCTAAAGAGATTGTCACA 58.137 36.000 1.47 0.00 36.09 3.58
6104 8854 9.649316 CCCTTTGGGTCTTTTTATATTGGTATA 57.351 33.333 0.00 0.00 38.25 1.47
6105 8855 8.547481 CCCTTTGGGTCTTTTTATATTGGTAT 57.453 34.615 0.00 0.00 38.25 2.73
6106 8856 7.964666 CCCTTTGGGTCTTTTTATATTGGTA 57.035 36.000 0.00 0.00 38.25 3.25
6107 8857 6.867519 CCCTTTGGGTCTTTTTATATTGGT 57.132 37.500 0.00 0.00 38.25 3.67
6123 8873 1.870064 AATTGGATCTGCCCCTTTGG 58.130 50.000 0.00 0.00 34.97 3.28
6124 8874 4.897670 AGATTAATTGGATCTGCCCCTTTG 59.102 41.667 5.62 0.00 32.79 2.77
6125 8875 5.143369 GAGATTAATTGGATCTGCCCCTTT 58.857 41.667 9.96 0.00 34.13 3.11
6126 8876 4.734266 GAGATTAATTGGATCTGCCCCTT 58.266 43.478 9.96 0.00 34.13 3.95
6127 8877 3.244700 CGAGATTAATTGGATCTGCCCCT 60.245 47.826 9.96 0.00 34.13 4.79
6128 8878 3.077359 CGAGATTAATTGGATCTGCCCC 58.923 50.000 9.96 0.00 34.13 5.80
6129 8879 3.077359 CCGAGATTAATTGGATCTGCCC 58.923 50.000 9.96 0.00 34.13 5.36
6130 8880 2.485814 GCCGAGATTAATTGGATCTGCC 59.514 50.000 9.96 0.00 34.13 4.85
6131 8881 2.485814 GGCCGAGATTAATTGGATCTGC 59.514 50.000 9.96 8.37 34.13 4.26
6132 8882 3.743521 TGGCCGAGATTAATTGGATCTG 58.256 45.455 9.96 4.52 34.13 2.90
6133 8883 4.042062 TGATGGCCGAGATTAATTGGATCT 59.958 41.667 0.00 6.01 36.60 2.75
6134 8884 4.326826 TGATGGCCGAGATTAATTGGATC 58.673 43.478 0.00 0.00 0.00 3.36
6135 8885 4.371624 TGATGGCCGAGATTAATTGGAT 57.628 40.909 0.00 0.00 0.00 3.41
6136 8886 3.855255 TGATGGCCGAGATTAATTGGA 57.145 42.857 0.00 0.00 0.00 3.53
6137 8887 4.916983 TTTGATGGCCGAGATTAATTGG 57.083 40.909 0.00 0.00 0.00 3.16
6138 8888 6.075762 TGATTTGATGGCCGAGATTAATTG 57.924 37.500 0.00 0.00 0.00 2.32
6139 8889 6.266103 ACATGATTTGATGGCCGAGATTAATT 59.734 34.615 0.00 0.00 0.00 1.40
6140 8890 5.771666 ACATGATTTGATGGCCGAGATTAAT 59.228 36.000 0.00 0.00 0.00 1.40
6141 8891 5.132502 ACATGATTTGATGGCCGAGATTAA 58.867 37.500 0.00 0.00 0.00 1.40
6142 8892 4.717877 ACATGATTTGATGGCCGAGATTA 58.282 39.130 0.00 0.00 0.00 1.75
6143 8893 3.559069 ACATGATTTGATGGCCGAGATT 58.441 40.909 0.00 0.00 0.00 2.40
6144 8894 3.144506 GACATGATTTGATGGCCGAGAT 58.855 45.455 0.00 0.00 0.00 2.75
6145 8895 2.093021 TGACATGATTTGATGGCCGAGA 60.093 45.455 0.00 0.00 29.16 4.04
6146 8896 2.291365 TGACATGATTTGATGGCCGAG 58.709 47.619 0.00 0.00 29.16 4.63
6147 8897 2.416680 TGACATGATTTGATGGCCGA 57.583 45.000 0.00 0.00 29.16 5.54
6148 8898 3.551454 GGATTGACATGATTTGATGGCCG 60.551 47.826 0.00 0.00 29.16 6.13
6149 8899 3.385433 TGGATTGACATGATTTGATGGCC 59.615 43.478 0.00 0.00 29.16 5.36
6150 8900 4.659111 TGGATTGACATGATTTGATGGC 57.341 40.909 0.00 0.00 0.00 4.40
6151 8901 5.038683 CGTTGGATTGACATGATTTGATGG 58.961 41.667 0.00 0.00 0.00 3.51
6152 8902 5.740569 GTCGTTGGATTGACATGATTTGATG 59.259 40.000 0.00 0.00 35.20 3.07
6153 8903 5.163622 GGTCGTTGGATTGACATGATTTGAT 60.164 40.000 0.00 0.00 36.83 2.57
6154 8904 4.155826 GGTCGTTGGATTGACATGATTTGA 59.844 41.667 0.00 0.00 36.83 2.69
6155 8905 4.156556 AGGTCGTTGGATTGACATGATTTG 59.843 41.667 0.00 0.00 36.83 2.32
6156 8906 4.335416 AGGTCGTTGGATTGACATGATTT 58.665 39.130 0.00 0.00 36.83 2.17
6157 8907 3.955471 AGGTCGTTGGATTGACATGATT 58.045 40.909 0.00 0.00 36.83 2.57
6158 8908 3.634397 AGGTCGTTGGATTGACATGAT 57.366 42.857 0.00 0.00 36.83 2.45
6159 8909 3.767131 TCTAGGTCGTTGGATTGACATGA 59.233 43.478 0.00 0.00 36.83 3.07
6160 8910 3.865745 GTCTAGGTCGTTGGATTGACATG 59.134 47.826 0.00 0.00 36.83 3.21
6161 8911 3.769844 AGTCTAGGTCGTTGGATTGACAT 59.230 43.478 0.00 0.00 36.83 3.06
6162 8912 3.056821 CAGTCTAGGTCGTTGGATTGACA 60.057 47.826 0.00 0.00 36.83 3.58
6163 8913 3.056749 ACAGTCTAGGTCGTTGGATTGAC 60.057 47.826 0.00 0.00 0.00 3.18
6164 8914 3.162666 ACAGTCTAGGTCGTTGGATTGA 58.837 45.455 0.00 0.00 0.00 2.57
6165 8915 3.594603 ACAGTCTAGGTCGTTGGATTG 57.405 47.619 0.00 0.00 0.00 2.67
6166 8916 4.039973 TGAAACAGTCTAGGTCGTTGGATT 59.960 41.667 0.00 0.00 0.00 3.01
6167 8917 3.576982 TGAAACAGTCTAGGTCGTTGGAT 59.423 43.478 0.00 0.00 0.00 3.41
6168 8918 2.960384 TGAAACAGTCTAGGTCGTTGGA 59.040 45.455 0.00 0.00 0.00 3.53
6169 8919 3.380479 TGAAACAGTCTAGGTCGTTGG 57.620 47.619 0.00 0.00 0.00 3.77
6170 8920 4.750098 ACATTGAAACAGTCTAGGTCGTTG 59.250 41.667 0.00 0.00 0.00 4.10
6171 8921 4.957296 ACATTGAAACAGTCTAGGTCGTT 58.043 39.130 0.00 0.00 0.00 3.85
6172 8922 4.557205 GACATTGAAACAGTCTAGGTCGT 58.443 43.478 0.00 0.00 34.13 4.34
6174 8924 4.806330 TCGACATTGAAACAGTCTAGGTC 58.194 43.478 0.00 0.00 38.76 3.85
6175 8925 4.866508 TCGACATTGAAACAGTCTAGGT 57.133 40.909 0.00 0.00 0.00 3.08
6176 8926 4.090066 CGTTCGACATTGAAACAGTCTAGG 59.910 45.833 0.00 0.00 0.00 3.02
6177 8927 4.433022 GCGTTCGACATTGAAACAGTCTAG 60.433 45.833 0.00 0.00 0.00 2.43
6178 8928 3.427528 GCGTTCGACATTGAAACAGTCTA 59.572 43.478 0.00 0.00 0.00 2.59
6179 8929 2.221055 GCGTTCGACATTGAAACAGTCT 59.779 45.455 0.00 0.00 0.00 3.24
6180 8930 2.221055 AGCGTTCGACATTGAAACAGTC 59.779 45.455 0.00 0.00 0.00 3.51
6181 8931 2.210116 AGCGTTCGACATTGAAACAGT 58.790 42.857 0.00 0.00 0.00 3.55
6182 8932 2.220824 TGAGCGTTCGACATTGAAACAG 59.779 45.455 0.00 0.00 0.00 3.16
6183 8933 2.205911 TGAGCGTTCGACATTGAAACA 58.794 42.857 0.00 0.00 0.00 2.83
6184 8934 2.941891 TGAGCGTTCGACATTGAAAC 57.058 45.000 0.00 0.00 0.00 2.78
6185 8935 2.609916 TGTTGAGCGTTCGACATTGAAA 59.390 40.909 17.42 0.00 41.72 2.69
6186 8936 2.033236 GTGTTGAGCGTTCGACATTGAA 60.033 45.455 23.05 0.00 46.65 2.69
6187 8937 1.525197 GTGTTGAGCGTTCGACATTGA 59.475 47.619 23.05 0.00 46.65 2.57
6188 8938 1.718361 CGTGTTGAGCGTTCGACATTG 60.718 52.381 23.05 15.58 46.65 2.82
6189 8939 0.506932 CGTGTTGAGCGTTCGACATT 59.493 50.000 23.05 0.00 46.65 2.71
6190 8940 0.596600 ACGTGTTGAGCGTTCGACAT 60.597 50.000 23.05 7.67 46.65 3.06
6191 8941 1.226745 ACGTGTTGAGCGTTCGACA 60.227 52.632 17.42 17.42 43.82 4.35
6192 8942 3.609258 ACGTGTTGAGCGTTCGAC 58.391 55.556 12.39 12.39 39.79 4.20
6208 8958 5.220024 GCATGAAATTAACTGCACGCTAAAC 60.220 40.000 0.00 0.00 34.77 2.01
6209 8959 4.856487 GCATGAAATTAACTGCACGCTAAA 59.144 37.500 0.00 0.00 34.77 1.85
6210 8960 4.411327 GCATGAAATTAACTGCACGCTAA 58.589 39.130 0.00 0.00 34.77 3.09
6211 8961 3.181501 GGCATGAAATTAACTGCACGCTA 60.182 43.478 0.00 0.00 36.34 4.26
6212 8962 2.415893 GGCATGAAATTAACTGCACGCT 60.416 45.455 0.00 0.00 36.34 5.07
6213 8963 1.919918 GGCATGAAATTAACTGCACGC 59.080 47.619 0.00 0.00 36.34 5.34
6214 8964 3.214697 TGGCATGAAATTAACTGCACG 57.785 42.857 0.00 0.00 36.34 5.34
6215 8965 7.775397 ATATTTGGCATGAAATTAACTGCAC 57.225 32.000 0.00 0.53 36.34 4.57
6216 8966 8.694540 ACTATATTTGGCATGAAATTAACTGCA 58.305 29.630 0.00 0.00 36.34 4.41
6217 8967 8.971321 CACTATATTTGGCATGAAATTAACTGC 58.029 33.333 0.00 0.00 0.00 4.40
6218 8968 8.971321 GCACTATATTTGGCATGAAATTAACTG 58.029 33.333 0.00 0.00 0.00 3.16
6219 8969 8.917088 AGCACTATATTTGGCATGAAATTAACT 58.083 29.630 0.00 0.00 0.00 2.24
6223 8973 9.918630 GATTAGCACTATATTTGGCATGAAATT 57.081 29.630 0.00 0.00 0.00 1.82
6224 8974 9.081204 TGATTAGCACTATATTTGGCATGAAAT 57.919 29.630 0.00 0.00 0.00 2.17
6225 8975 8.352201 GTGATTAGCACTATATTTGGCATGAAA 58.648 33.333 0.00 0.00 44.27 2.69
6226 8976 7.874940 GTGATTAGCACTATATTTGGCATGAA 58.125 34.615 0.00 0.00 44.27 2.57
6227 8977 7.439157 GTGATTAGCACTATATTTGGCATGA 57.561 36.000 0.00 0.00 44.27 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.