Multiple sequence alignment - TraesCS1D01G345200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G345200 chr1D 100.000 7093 0 0 1 7093 433362739 433369831 0.000000e+00 13099.0
1 TraesCS1D01G345200 chr1A 93.638 4684 186 57 2447 7093 531718564 531723172 0.000000e+00 6896.0
2 TraesCS1D01G345200 chr1A 90.390 1873 112 39 585 2403 531716708 531718566 0.000000e+00 2399.0
3 TraesCS1D01G345200 chr1B 94.010 3322 127 31 2451 5757 585327600 585330864 0.000000e+00 4966.0
4 TraesCS1D01G345200 chr1B 89.645 1748 89 38 727 2403 585325872 585327598 0.000000e+00 2141.0
5 TraesCS1D01G345200 chr1B 91.317 1359 81 20 5754 7093 585330986 585332326 0.000000e+00 1821.0
6 TraesCS1D01G345200 chr1B 93.088 217 11 2 378 592 595445033 595444819 1.490000e-81 315.0
7 TraesCS1D01G345200 chr1B 93.780 209 10 2 378 585 570480373 570480167 1.920000e-80 311.0
8 TraesCS1D01G345200 chr1B 90.090 111 4 4 585 689 585325757 585325866 3.450000e-28 137.0
9 TraesCS1D01G345200 chr5A 85.211 3665 424 65 2654 6267 691440055 691436458 0.000000e+00 3657.0
10 TraesCS1D01G345200 chr5A 81.551 851 115 26 1214 2046 691441363 691440537 0.000000e+00 664.0
11 TraesCS1D01G345200 chr5A 77.451 306 65 4 5773 6076 396502687 396502990 5.650000e-41 180.0
12 TraesCS1D01G345200 chr5A 77.160 324 62 8 1679 2000 382776138 382775825 2.030000e-40 178.0
13 TraesCS1D01G345200 chr5A 86.154 130 8 3 958 1087 691441666 691441547 1.610000e-26 132.0
14 TraesCS1D01G345200 chr5A 78.571 112 21 2 474 584 382088463 382088354 3.550000e-08 71.3
15 TraesCS1D01G345200 chrUn 84.881 3684 434 72 2654 6283 126753060 126756674 0.000000e+00 3603.0
16 TraesCS1D01G345200 chrUn 82.464 844 105 25 1213 2040 126751748 126752564 0.000000e+00 699.0
17 TraesCS1D01G345200 chrUn 98.630 73 1 0 1015 1087 126751496 126751568 5.770000e-26 130.0
18 TraesCS1D01G345200 chr4B 83.694 3925 471 93 2451 6283 653144800 653148647 0.000000e+00 3546.0
19 TraesCS1D01G345200 chr4B 80.958 835 128 22 1214 2037 653143741 653144555 3.610000e-177 632.0
20 TraesCS1D01G345200 chr4B 98.611 72 1 0 1016 1087 653143493 653143564 2.080000e-25 128.0
21 TraesCS1D01G345200 chr3D 83.112 1131 155 22 3917 5026 481911894 481910779 0.000000e+00 998.0
22 TraesCS1D01G345200 chr3D 79.747 1264 210 32 2674 3914 481913479 481912239 0.000000e+00 874.0
23 TraesCS1D01G345200 chr3D 84.405 513 67 8 5203 5708 481910639 481910133 6.390000e-135 492.0
24 TraesCS1D01G345200 chr3D 85.924 341 45 3 5789 6128 481909582 481909244 1.880000e-95 361.0
25 TraesCS1D01G345200 chr7B 93.868 212 10 2 378 588 296754999 296754790 4.130000e-82 316.0
26 TraesCS1D01G345200 chr3B 93.810 210 7 4 378 585 554905694 554905489 1.920000e-80 311.0
27 TraesCS1D01G345200 chr3B 93.750 208 10 2 378 584 256788330 256788125 6.910000e-80 309.0
28 TraesCS1D01G345200 chr3B 93.750 208 10 2 378 584 435956991 435957196 6.910000e-80 309.0
29 TraesCS1D01G345200 chr3B 93.750 208 10 2 378 584 737703594 737703799 6.910000e-80 309.0
30 TraesCS1D01G345200 chr3B 92.958 213 12 2 378 589 758925850 758926060 2.490000e-79 307.0
31 TraesCS1D01G345200 chr3B 76.687 326 60 10 1679 2000 772721727 772721414 4.400000e-37 167.0
32 TraesCS1D01G345200 chr3B 82.955 176 30 0 1261 1436 702359949 702360124 7.360000e-35 159.0
33 TraesCS1D01G345200 chr3B 72.954 281 49 15 324 584 256788116 256788389 9.870000e-09 73.1
34 TraesCS1D01G345200 chr3B 93.750 48 3 0 330 377 758926059 758926012 9.870000e-09 73.1
35 TraesCS1D01G345200 chr2B 93.780 209 10 2 378 585 717631597 717631803 1.920000e-80 311.0
36 TraesCS1D01G345200 chr2B 92.308 52 2 2 326 377 546628399 546628448 9.870000e-09 73.1
37 TraesCS1D01G345200 chr5D 79.208 303 61 2 5775 6076 299404596 299404897 7.210000e-50 209.0
38 TraesCS1D01G345200 chr5B 78.878 303 62 2 5775 6076 340622801 340623102 3.350000e-48 204.0
39 TraesCS1D01G345200 chr5B 84.091 176 28 0 1261 1436 52305912 52306087 3.400000e-38 171.0
40 TraesCS1D01G345200 chr5B 85.470 117 17 0 1673 1789 645087691 645087807 9.660000e-24 122.0
41 TraesCS1D01G345200 chr5B 93.333 45 3 0 333 377 355210870 355210826 4.590000e-07 67.6
42 TraesCS1D01G345200 chr6D 84.916 179 27 0 1261 1439 147220846 147220668 1.570000e-41 182.0
43 TraesCS1D01G345200 chr2A 76.571 350 70 8 1679 2026 444664856 444664517 1.570000e-41 182.0
44 TraesCS1D01G345200 chr7A 76.708 322 66 6 1679 2000 133638226 133637914 3.400000e-38 171.0
45 TraesCS1D01G345200 chr6B 88.889 63 5 2 315 377 717060847 717060787 7.630000e-10 76.8
46 TraesCS1D01G345200 chr6A 94.118 51 1 2 333 383 284823758 284823710 7.630000e-10 76.8
47 TraesCS1D01G345200 chr6A 92.157 51 3 1 331 381 60617577 60617528 3.550000e-08 71.3
48 TraesCS1D01G345200 chr4A 95.556 45 2 0 333 377 706687826 706687870 9.870000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G345200 chr1D 433362739 433369831 7092 False 13099.000000 13099 100.000000 1 7093 1 chr1D.!!$F1 7092
1 TraesCS1D01G345200 chr1A 531716708 531723172 6464 False 4647.500000 6896 92.014000 585 7093 2 chr1A.!!$F1 6508
2 TraesCS1D01G345200 chr1B 585325757 585332326 6569 False 2266.250000 4966 91.265500 585 7093 4 chr1B.!!$F1 6508
3 TraesCS1D01G345200 chr5A 691436458 691441666 5208 True 1484.333333 3657 84.305333 958 6267 3 chr5A.!!$R3 5309
4 TraesCS1D01G345200 chrUn 126751496 126756674 5178 False 1477.333333 3603 88.658333 1015 6283 3 chrUn.!!$F1 5268
5 TraesCS1D01G345200 chr4B 653143493 653148647 5154 False 1435.333333 3546 87.754333 1016 6283 3 chr4B.!!$F1 5267
6 TraesCS1D01G345200 chr3D 481909244 481913479 4235 True 681.250000 998 83.297000 2674 6128 4 chr3D.!!$R1 3454

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
50 51 0.031585 TGGTTGGACGTGACGAAGAG 59.968 55.000 13.70 0.0 0.00 2.85 F
1099 1203 0.041833 CCAGGTCTCCCTTCTCTCCA 59.958 60.000 0.00 0.0 39.89 3.86 F
1639 1789 1.306148 CATGCCACACTAGCAGATGG 58.694 55.000 0.00 0.0 44.90 3.51 F
1794 1957 1.699634 TCCTGTGAGTTTCTTCCAGGG 59.300 52.381 0.00 0.0 42.38 4.45 F
2052 2218 1.981256 TCCTTTGCTGGAACTGGAAC 58.019 50.000 1.38 0.0 37.34 3.62 F
3519 3820 2.367567 TGGCTCCGTGATAGGTAAATCC 59.632 50.000 0.00 0.0 0.00 3.01 F
4218 4880 0.966920 GTGGTGGACTCCGAAAGAGA 59.033 55.000 0.00 0.0 46.50 3.10 F
5168 5889 1.593196 TAACCTATTCAGCGCCATGC 58.407 50.000 2.29 0.0 46.98 4.06 F
5177 5898 3.113745 GCGCCATGCAGCAATAGT 58.886 55.556 0.00 0.0 45.45 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1639 1789 0.376852 TGAACGAAATAGGCGCATGC 59.623 50.000 10.83 7.91 41.71 4.06 R
2640 2902 2.645838 AGTAGGTACGCGAGGGATAA 57.354 50.000 15.93 0.00 0.00 1.75 R
3229 3515 0.107654 AGGTGAAGAATAGTGCGCCC 60.108 55.000 4.18 0.00 0.00 6.13 R
3579 3885 3.250040 ACGCAGACCTGTACAAAATCAAC 59.750 43.478 0.00 0.00 0.00 3.18 R
3670 3976 3.366997 GCTGCGAAAAATGCGAGC 58.633 55.556 0.00 0.00 34.24 5.03 R
5150 5871 0.394216 TGCATGGCGCTGAATAGGTT 60.394 50.000 7.64 0.00 43.06 3.50 R
5261 5982 0.551377 TCCCCACTTGCTTATCCCCA 60.551 55.000 0.00 0.00 0.00 4.96 R
5989 7318 1.342819 TGCTAAAACGGCCTTTTGCAT 59.657 42.857 18.15 3.18 43.89 3.96 R
6402 7739 6.259829 AGTTTGGATTTTGGAAATTTGTTCGG 59.740 34.615 0.00 0.00 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.633668 ACGAAGAGACGACTTTCAATAATG 57.366 37.500 0.00 0.00 37.03 1.90
26 27 6.157211 ACGAAGAGACGACTTTCAATAATGT 58.843 36.000 0.00 0.00 37.03 2.71
27 28 6.308282 ACGAAGAGACGACTTTCAATAATGTC 59.692 38.462 0.00 0.00 36.76 3.06
34 35 5.607119 GACTTTCAATAATGTCGTGTGGT 57.393 39.130 0.00 0.00 32.19 4.16
35 36 5.997385 GACTTTCAATAATGTCGTGTGGTT 58.003 37.500 0.00 0.00 32.19 3.67
36 37 5.757886 ACTTTCAATAATGTCGTGTGGTTG 58.242 37.500 0.00 0.00 0.00 3.77
37 38 4.757799 TTCAATAATGTCGTGTGGTTGG 57.242 40.909 0.00 0.00 0.00 3.77
38 39 4.009370 TCAATAATGTCGTGTGGTTGGA 57.991 40.909 0.00 0.00 0.00 3.53
39 40 3.749088 TCAATAATGTCGTGTGGTTGGAC 59.251 43.478 0.00 0.00 0.00 4.02
40 41 1.785768 TAATGTCGTGTGGTTGGACG 58.214 50.000 0.00 0.00 36.91 4.79
41 42 0.179067 AATGTCGTGTGGTTGGACGT 60.179 50.000 0.00 0.00 36.91 4.34
42 43 0.878523 ATGTCGTGTGGTTGGACGTG 60.879 55.000 0.00 0.00 36.91 4.49
43 44 1.227031 GTCGTGTGGTTGGACGTGA 60.227 57.895 0.00 0.00 36.91 4.35
44 45 1.227031 TCGTGTGGTTGGACGTGAC 60.227 57.895 0.00 0.00 36.91 3.67
45 46 2.582265 CGTGTGGTTGGACGTGACG 61.582 63.158 2.24 2.24 0.00 4.35
46 47 1.227031 GTGTGGTTGGACGTGACGA 60.227 57.895 13.70 0.00 0.00 4.20
47 48 0.806884 GTGTGGTTGGACGTGACGAA 60.807 55.000 13.70 0.00 0.00 3.85
48 49 0.528901 TGTGGTTGGACGTGACGAAG 60.529 55.000 13.70 0.00 0.00 3.79
49 50 0.249155 GTGGTTGGACGTGACGAAGA 60.249 55.000 13.70 0.00 0.00 2.87
50 51 0.031585 TGGTTGGACGTGACGAAGAG 59.968 55.000 13.70 0.00 0.00 2.85
51 52 0.666577 GGTTGGACGTGACGAAGAGG 60.667 60.000 13.70 0.00 0.00 3.69
52 53 0.313043 GTTGGACGTGACGAAGAGGA 59.687 55.000 13.70 0.00 0.00 3.71
53 54 0.313043 TTGGACGTGACGAAGAGGAC 59.687 55.000 13.70 0.00 0.00 3.85
54 55 0.536687 TGGACGTGACGAAGAGGACT 60.537 55.000 13.70 0.00 0.00 3.85
55 56 0.109689 GGACGTGACGAAGAGGACTG 60.110 60.000 13.70 0.00 0.00 3.51
56 57 0.592148 GACGTGACGAAGAGGACTGT 59.408 55.000 13.70 0.00 0.00 3.55
57 58 0.311165 ACGTGACGAAGAGGACTGTG 59.689 55.000 13.70 0.00 0.00 3.66
58 59 1.004277 CGTGACGAAGAGGACTGTGC 61.004 60.000 0.00 0.00 0.00 4.57
59 60 0.315568 GTGACGAAGAGGACTGTGCT 59.684 55.000 0.00 0.00 0.00 4.40
60 61 0.598562 TGACGAAGAGGACTGTGCTC 59.401 55.000 20.12 20.12 34.82 4.26
61 62 0.455295 GACGAAGAGGACTGTGCTCG 60.455 60.000 21.21 14.27 40.01 5.03
62 63 1.173444 ACGAAGAGGACTGTGCTCGT 61.173 55.000 21.21 18.98 40.01 4.18
63 64 0.730834 CGAAGAGGACTGTGCTCGTG 60.731 60.000 20.81 12.08 40.01 4.35
64 65 1.005630 AAGAGGACTGTGCTCGTGC 60.006 57.895 21.21 1.71 40.01 5.34
65 66 1.467678 AAGAGGACTGTGCTCGTGCT 61.468 55.000 21.21 3.54 40.01 4.40
66 67 0.609406 AGAGGACTGTGCTCGTGCTA 60.609 55.000 21.21 0.00 40.01 3.49
67 68 0.179150 GAGGACTGTGCTCGTGCTAG 60.179 60.000 13.59 11.12 40.48 3.42
68 69 1.807573 GGACTGTGCTCGTGCTAGC 60.808 63.158 8.10 8.10 43.08 3.42
69 70 2.126307 ACTGTGCTCGTGCTAGCG 60.126 61.111 10.77 0.00 45.85 4.26
72 73 3.251043 GTGCTCGTGCTAGCGCTC 61.251 66.667 24.83 14.29 46.97 5.03
73 74 3.747976 TGCTCGTGCTAGCGCTCA 61.748 61.111 24.83 16.49 45.85 4.26
74 75 2.507102 GCTCGTGCTAGCGCTCAA 60.507 61.111 24.83 10.17 36.97 3.02
75 76 2.793322 GCTCGTGCTAGCGCTCAAC 61.793 63.158 24.83 10.28 36.97 3.18
76 77 1.153939 CTCGTGCTAGCGCTCAACT 60.154 57.895 24.83 0.00 36.97 3.16
77 78 0.734253 CTCGTGCTAGCGCTCAACTT 60.734 55.000 24.83 0.00 36.97 2.66
78 79 0.319555 TCGTGCTAGCGCTCAACTTT 60.320 50.000 24.83 0.00 36.97 2.66
79 80 0.093705 CGTGCTAGCGCTCAACTTTC 59.906 55.000 24.83 0.00 36.97 2.62
80 81 0.093705 GTGCTAGCGCTCAACTTTCG 59.906 55.000 16.34 0.00 36.97 3.46
81 82 0.319555 TGCTAGCGCTCAACTTTCGT 60.320 50.000 16.34 0.00 36.97 3.85
82 83 0.790814 GCTAGCGCTCAACTTTCGTT 59.209 50.000 16.34 0.00 0.00 3.85
83 84 1.201823 GCTAGCGCTCAACTTTCGTTC 60.202 52.381 16.34 0.00 0.00 3.95
84 85 2.329379 CTAGCGCTCAACTTTCGTTCT 58.671 47.619 16.34 0.00 0.00 3.01
85 86 0.861837 AGCGCTCAACTTTCGTTCTG 59.138 50.000 2.64 0.00 0.00 3.02
86 87 0.110644 GCGCTCAACTTTCGTTCTGG 60.111 55.000 0.00 0.00 0.00 3.86
87 88 1.217882 CGCTCAACTTTCGTTCTGGT 58.782 50.000 0.00 0.00 0.00 4.00
88 89 2.400399 CGCTCAACTTTCGTTCTGGTA 58.600 47.619 0.00 0.00 0.00 3.25
89 90 2.798283 CGCTCAACTTTCGTTCTGGTAA 59.202 45.455 0.00 0.00 0.00 2.85
90 91 3.362693 CGCTCAACTTTCGTTCTGGTAAC 60.363 47.826 0.00 0.00 0.00 2.50
91 92 3.808174 GCTCAACTTTCGTTCTGGTAACT 59.192 43.478 0.00 0.00 37.61 2.24
92 93 4.272748 GCTCAACTTTCGTTCTGGTAACTT 59.727 41.667 0.00 0.00 37.61 2.66
93 94 5.558463 GCTCAACTTTCGTTCTGGTAACTTC 60.558 44.000 0.00 0.00 37.61 3.01
94 95 5.667466 TCAACTTTCGTTCTGGTAACTTCT 58.333 37.500 0.00 0.00 37.61 2.85
95 96 6.110707 TCAACTTTCGTTCTGGTAACTTCTT 58.889 36.000 0.00 0.00 37.61 2.52
96 97 6.596497 TCAACTTTCGTTCTGGTAACTTCTTT 59.404 34.615 0.00 0.00 37.61 2.52
97 98 6.997239 ACTTTCGTTCTGGTAACTTCTTTT 57.003 33.333 0.00 0.00 37.61 2.27
98 99 8.392612 CAACTTTCGTTCTGGTAACTTCTTTTA 58.607 33.333 0.00 0.00 37.61 1.52
99 100 8.672823 ACTTTCGTTCTGGTAACTTCTTTTAT 57.327 30.769 0.00 0.00 37.61 1.40
100 101 9.768662 ACTTTCGTTCTGGTAACTTCTTTTATA 57.231 29.630 0.00 0.00 37.61 0.98
103 104 8.712285 TCGTTCTGGTAACTTCTTTTATATGG 57.288 34.615 0.00 0.00 37.61 2.74
104 105 8.533657 TCGTTCTGGTAACTTCTTTTATATGGA 58.466 33.333 0.00 0.00 37.61 3.41
105 106 9.158233 CGTTCTGGTAACTTCTTTTATATGGAA 57.842 33.333 0.00 0.00 37.61 3.53
123 124 8.908786 ATATGGAAATGATACTCGTTTGATGT 57.091 30.769 0.00 0.00 35.87 3.06
124 125 6.421377 TGGAAATGATACTCGTTTGATGTG 57.579 37.500 0.00 0.00 35.87 3.21
125 126 5.353956 TGGAAATGATACTCGTTTGATGTGG 59.646 40.000 0.00 0.00 35.87 4.17
126 127 4.882671 AATGATACTCGTTTGATGTGGC 57.117 40.909 0.00 0.00 0.00 5.01
127 128 3.610040 TGATACTCGTTTGATGTGGCT 57.390 42.857 0.00 0.00 0.00 4.75
128 129 3.521560 TGATACTCGTTTGATGTGGCTC 58.478 45.455 0.00 0.00 0.00 4.70
129 130 3.195610 TGATACTCGTTTGATGTGGCTCT 59.804 43.478 0.00 0.00 0.00 4.09
130 131 2.086054 ACTCGTTTGATGTGGCTCTC 57.914 50.000 0.00 0.00 0.00 3.20
131 132 0.994995 CTCGTTTGATGTGGCTCTCG 59.005 55.000 0.00 0.00 0.00 4.04
132 133 0.601057 TCGTTTGATGTGGCTCTCGA 59.399 50.000 0.00 0.00 0.00 4.04
133 134 1.204704 TCGTTTGATGTGGCTCTCGAT 59.795 47.619 0.00 0.00 0.00 3.59
134 135 1.590238 CGTTTGATGTGGCTCTCGATC 59.410 52.381 0.00 0.00 0.00 3.69
135 136 2.621338 GTTTGATGTGGCTCTCGATCA 58.379 47.619 0.00 0.00 0.00 2.92
136 137 3.201290 GTTTGATGTGGCTCTCGATCAT 58.799 45.455 0.00 0.00 0.00 2.45
137 138 2.521105 TGATGTGGCTCTCGATCATG 57.479 50.000 0.00 0.00 0.00 3.07
138 139 1.758862 TGATGTGGCTCTCGATCATGT 59.241 47.619 0.00 0.00 0.00 3.21
139 140 2.223900 TGATGTGGCTCTCGATCATGTC 60.224 50.000 0.00 0.00 0.00 3.06
140 141 1.185315 TGTGGCTCTCGATCATGTCA 58.815 50.000 0.00 0.00 0.00 3.58
141 142 1.758862 TGTGGCTCTCGATCATGTCAT 59.241 47.619 0.00 0.00 0.00 3.06
142 143 2.223900 TGTGGCTCTCGATCATGTCATC 60.224 50.000 0.00 0.00 0.00 2.92
143 144 2.034124 TGGCTCTCGATCATGTCATCA 58.966 47.619 0.00 0.00 0.00 3.07
144 145 2.631545 TGGCTCTCGATCATGTCATCAT 59.368 45.455 0.00 0.00 34.21 2.45
145 146 3.070590 TGGCTCTCGATCATGTCATCATT 59.929 43.478 0.00 0.00 31.15 2.57
146 147 4.063689 GGCTCTCGATCATGTCATCATTT 58.936 43.478 0.00 0.00 31.15 2.32
147 148 4.152045 GGCTCTCGATCATGTCATCATTTC 59.848 45.833 0.00 0.00 31.15 2.17
148 149 4.152045 GCTCTCGATCATGTCATCATTTCC 59.848 45.833 0.00 0.00 31.15 3.13
149 150 5.539979 CTCTCGATCATGTCATCATTTCCT 58.460 41.667 0.00 0.00 31.15 3.36
150 151 5.536260 TCTCGATCATGTCATCATTTCCTC 58.464 41.667 0.00 0.00 31.15 3.71
151 152 4.635223 TCGATCATGTCATCATTTCCTCC 58.365 43.478 0.00 0.00 31.15 4.30
152 153 4.346127 TCGATCATGTCATCATTTCCTCCT 59.654 41.667 0.00 0.00 31.15 3.69
153 154 5.061853 CGATCATGTCATCATTTCCTCCTT 58.938 41.667 0.00 0.00 31.15 3.36
154 155 5.530171 CGATCATGTCATCATTTCCTCCTTT 59.470 40.000 0.00 0.00 31.15 3.11
155 156 6.039047 CGATCATGTCATCATTTCCTCCTTTT 59.961 38.462 0.00 0.00 31.15 2.27
156 157 7.415989 CGATCATGTCATCATTTCCTCCTTTTT 60.416 37.037 0.00 0.00 31.15 1.94
157 158 8.827832 ATCATGTCATCATTTCCTCCTTTTTA 57.172 30.769 0.00 0.00 31.15 1.52
158 159 8.055279 TCATGTCATCATTTCCTCCTTTTTAC 57.945 34.615 0.00 0.00 31.15 2.01
159 160 6.834168 TGTCATCATTTCCTCCTTTTTACC 57.166 37.500 0.00 0.00 0.00 2.85
160 161 5.714806 TGTCATCATTTCCTCCTTTTTACCC 59.285 40.000 0.00 0.00 0.00 3.69
161 162 5.127194 GTCATCATTTCCTCCTTTTTACCCC 59.873 44.000 0.00 0.00 0.00 4.95
162 163 4.055710 TCATTTCCTCCTTTTTACCCCC 57.944 45.455 0.00 0.00 0.00 5.40
163 164 3.665618 TCATTTCCTCCTTTTTACCCCCT 59.334 43.478 0.00 0.00 0.00 4.79
164 165 4.108942 TCATTTCCTCCTTTTTACCCCCTT 59.891 41.667 0.00 0.00 0.00 3.95
165 166 4.562934 TTTCCTCCTTTTTACCCCCTTT 57.437 40.909 0.00 0.00 0.00 3.11
166 167 3.820195 TCCTCCTTTTTACCCCCTTTC 57.180 47.619 0.00 0.00 0.00 2.62
167 168 2.380932 TCCTCCTTTTTACCCCCTTTCC 59.619 50.000 0.00 0.00 0.00 3.13
168 169 2.443416 CTCCTTTTTACCCCCTTTCCG 58.557 52.381 0.00 0.00 0.00 4.30
169 170 0.892755 CCTTTTTACCCCCTTTCCGC 59.107 55.000 0.00 0.00 0.00 5.54
170 171 1.623163 CTTTTTACCCCCTTTCCGCA 58.377 50.000 0.00 0.00 0.00 5.69
171 172 1.544246 CTTTTTACCCCCTTTCCGCAG 59.456 52.381 0.00 0.00 0.00 5.18
172 173 0.896479 TTTTACCCCCTTTCCGCAGC 60.896 55.000 0.00 0.00 0.00 5.25
173 174 2.070399 TTTACCCCCTTTCCGCAGCA 62.070 55.000 0.00 0.00 0.00 4.41
174 175 1.858739 TTACCCCCTTTCCGCAGCAT 61.859 55.000 0.00 0.00 0.00 3.79
175 176 1.858739 TACCCCCTTTCCGCAGCATT 61.859 55.000 0.00 0.00 0.00 3.56
176 177 2.713967 CCCCCTTTCCGCAGCATTG 61.714 63.158 0.00 0.00 0.00 2.82
177 178 1.678635 CCCCTTTCCGCAGCATTGA 60.679 57.895 0.00 0.00 0.00 2.57
178 179 1.508088 CCCTTTCCGCAGCATTGAC 59.492 57.895 0.00 0.00 0.00 3.18
179 180 1.243342 CCCTTTCCGCAGCATTGACA 61.243 55.000 0.00 0.00 0.00 3.58
180 181 0.597568 CCTTTCCGCAGCATTGACAA 59.402 50.000 0.00 0.00 0.00 3.18
181 182 1.000385 CCTTTCCGCAGCATTGACAAA 60.000 47.619 0.00 0.00 0.00 2.83
182 183 2.545532 CCTTTCCGCAGCATTGACAAAA 60.546 45.455 0.00 0.00 0.00 2.44
183 184 2.132740 TTCCGCAGCATTGACAAAAC 57.867 45.000 0.00 0.00 0.00 2.43
184 185 1.028130 TCCGCAGCATTGACAAAACA 58.972 45.000 0.00 0.00 0.00 2.83
185 186 1.406898 TCCGCAGCATTGACAAAACAA 59.593 42.857 0.00 0.00 0.00 2.83
186 187 2.159184 TCCGCAGCATTGACAAAACAAA 60.159 40.909 0.00 0.00 33.44 2.83
187 188 2.606725 CCGCAGCATTGACAAAACAAAA 59.393 40.909 0.00 0.00 33.44 2.44
188 189 3.063180 CCGCAGCATTGACAAAACAAAAA 59.937 39.130 0.00 0.00 33.44 1.94
189 190 4.260702 CCGCAGCATTGACAAAACAAAAAT 60.261 37.500 0.00 0.00 33.44 1.82
190 191 4.667061 CGCAGCATTGACAAAACAAAAATG 59.333 37.500 0.00 0.00 33.44 2.32
191 192 5.502058 CGCAGCATTGACAAAACAAAAATGA 60.502 36.000 0.00 0.00 33.44 2.57
192 193 6.432107 GCAGCATTGACAAAACAAAAATGAT 58.568 32.000 0.00 0.00 33.44 2.45
193 194 6.913673 GCAGCATTGACAAAACAAAAATGATT 59.086 30.769 0.00 0.00 33.44 2.57
194 195 7.432838 GCAGCATTGACAAAACAAAAATGATTT 59.567 29.630 0.00 0.00 33.44 2.17
195 196 9.291664 CAGCATTGACAAAACAAAAATGATTTT 57.708 25.926 0.00 0.00 39.30 1.82
200 201 9.766277 TTGACAAAACAAAAATGATTTTACAGC 57.234 25.926 3.26 0.00 36.62 4.40
201 202 8.939929 TGACAAAACAAAAATGATTTTACAGCA 58.060 25.926 3.26 0.00 36.62 4.41
202 203 9.934190 GACAAAACAAAAATGATTTTACAGCAT 57.066 25.926 3.26 0.00 36.62 3.79
205 206 9.649024 AAAACAAAAATGATTTTACAGCATTCG 57.351 25.926 3.26 0.00 36.62 3.34
206 207 6.820459 ACAAAAATGATTTTACAGCATTCGC 58.180 32.000 3.26 0.00 36.62 4.70
207 208 6.423302 ACAAAAATGATTTTACAGCATTCGCA 59.577 30.769 3.26 0.00 37.33 5.10
208 209 7.042187 ACAAAAATGATTTTACAGCATTCGCAA 60.042 29.630 3.26 0.00 37.33 4.85
209 210 7.599630 AAAATGATTTTACAGCATTCGCAAT 57.400 28.000 0.49 0.00 42.27 3.56
210 211 7.599630 AAATGATTTTACAGCATTCGCAATT 57.400 28.000 0.00 0.00 42.27 2.32
211 212 8.700722 AAATGATTTTACAGCATTCGCAATTA 57.299 26.923 0.00 0.00 42.27 1.40
212 213 8.876275 AATGATTTTACAGCATTCGCAATTAT 57.124 26.923 0.00 0.00 42.27 1.28
213 214 7.912949 TGATTTTACAGCATTCGCAATTATC 57.087 32.000 0.00 0.00 42.27 1.75
214 215 7.479150 TGATTTTACAGCATTCGCAATTATCA 58.521 30.769 0.00 0.00 42.27 2.15
215 216 7.431960 TGATTTTACAGCATTCGCAATTATCAC 59.568 33.333 0.00 0.00 42.27 3.06
216 217 6.435430 TTTACAGCATTCGCAATTATCACT 57.565 33.333 0.00 0.00 42.27 3.41
217 218 4.970662 ACAGCATTCGCAATTATCACTT 57.029 36.364 0.00 0.00 42.27 3.16
218 219 5.314923 ACAGCATTCGCAATTATCACTTT 57.685 34.783 0.00 0.00 42.27 2.66
219 220 5.713025 ACAGCATTCGCAATTATCACTTTT 58.287 33.333 0.00 0.00 42.27 2.27
220 221 6.158598 ACAGCATTCGCAATTATCACTTTTT 58.841 32.000 0.00 0.00 42.27 1.94
246 247 4.717233 TGCGGAATTTGCAATTATCACT 57.283 36.364 0.00 0.00 39.87 3.41
247 248 5.826601 TGCGGAATTTGCAATTATCACTA 57.173 34.783 0.00 0.00 39.87 2.74
248 249 6.201226 TGCGGAATTTGCAATTATCACTAA 57.799 33.333 0.00 0.00 39.87 2.24
249 250 6.033341 TGCGGAATTTGCAATTATCACTAAC 58.967 36.000 0.00 0.00 39.87 2.34
250 251 6.127758 TGCGGAATTTGCAATTATCACTAACT 60.128 34.615 0.00 0.00 39.87 2.24
251 252 7.066404 TGCGGAATTTGCAATTATCACTAACTA 59.934 33.333 0.00 0.00 39.87 2.24
252 253 7.913297 GCGGAATTTGCAATTATCACTAACTAA 59.087 33.333 0.00 0.00 0.00 2.24
253 254 9.950680 CGGAATTTGCAATTATCACTAACTAAT 57.049 29.630 0.00 0.00 0.00 1.73
258 259 7.652300 TGCAATTATCACTAACTAATAGGCG 57.348 36.000 0.00 0.00 35.81 5.52
259 260 7.438564 TGCAATTATCACTAACTAATAGGCGA 58.561 34.615 0.00 0.00 35.81 5.54
260 261 7.384115 TGCAATTATCACTAACTAATAGGCGAC 59.616 37.037 0.00 0.00 35.81 5.19
262 263 9.477484 CAATTATCACTAACTAATAGGCGACTT 57.523 33.333 0.00 0.00 43.67 3.01
263 264 9.477484 AATTATCACTAACTAATAGGCGACTTG 57.523 33.333 0.00 0.00 43.67 3.16
264 265 6.710597 ATCACTAACTAATAGGCGACTTGA 57.289 37.500 0.00 0.00 43.67 3.02
265 266 6.519679 TCACTAACTAATAGGCGACTTGAA 57.480 37.500 0.00 0.00 43.67 2.69
266 267 6.327934 TCACTAACTAATAGGCGACTTGAAC 58.672 40.000 0.00 0.00 43.67 3.18
267 268 6.152323 TCACTAACTAATAGGCGACTTGAACT 59.848 38.462 0.00 0.00 43.67 3.01
268 269 6.253727 CACTAACTAATAGGCGACTTGAACTG 59.746 42.308 0.00 0.00 43.67 3.16
269 270 5.401531 AACTAATAGGCGACTTGAACTGA 57.598 39.130 0.00 0.00 43.67 3.41
270 271 5.599999 ACTAATAGGCGACTTGAACTGAT 57.400 39.130 0.00 0.00 43.67 2.90
271 272 5.352284 ACTAATAGGCGACTTGAACTGATG 58.648 41.667 0.00 0.00 43.67 3.07
272 273 3.895232 ATAGGCGACTTGAACTGATGT 57.105 42.857 0.00 0.00 43.67 3.06
273 274 2.550830 AGGCGACTTGAACTGATGTT 57.449 45.000 0.00 0.00 37.44 2.71
274 275 3.585862 TAGGCGACTTGAACTGATGTTC 58.414 45.455 0.00 2.35 46.07 3.18
275 276 3.258372 TAGGCGACTTGAACTGATGTTCT 59.742 43.478 0.00 0.00 46.06 3.01
276 277 4.461431 TAGGCGACTTGAACTGATGTTCTA 59.539 41.667 0.00 2.48 46.06 2.10
277 278 5.047590 TAGGCGACTTGAACTGATGTTCTAA 60.048 40.000 0.00 3.28 46.06 2.10
278 279 6.845721 TAGGCGACTTGAACTGATGTTCTAAG 60.846 42.308 0.00 12.18 46.06 2.18
279 280 8.922630 TAGGCGACTTGAACTGATGTTCTAAGA 61.923 40.741 0.00 0.00 46.06 2.10
338 339 8.189460 GGATTTATCCTATATGTGACGTACTCC 58.811 40.741 1.40 0.00 43.73 3.85
339 340 7.458409 TTTATCCTATATGTGACGTACTCCC 57.542 40.000 0.00 0.00 0.00 4.30
340 341 4.719026 TCCTATATGTGACGTACTCCCT 57.281 45.455 0.00 0.00 0.00 4.20
341 342 5.057843 TCCTATATGTGACGTACTCCCTT 57.942 43.478 0.00 0.00 0.00 3.95
342 343 5.068636 TCCTATATGTGACGTACTCCCTTC 58.931 45.833 0.00 0.00 0.00 3.46
343 344 3.984508 ATATGTGACGTACTCCCTTCG 57.015 47.619 0.00 0.00 0.00 3.79
344 345 1.542492 ATGTGACGTACTCCCTTCGT 58.458 50.000 0.00 0.00 40.49 3.85
345 346 1.321474 TGTGACGTACTCCCTTCGTT 58.679 50.000 0.00 0.00 37.92 3.85
346 347 1.682854 TGTGACGTACTCCCTTCGTTT 59.317 47.619 0.00 0.00 37.92 3.60
347 348 2.101249 TGTGACGTACTCCCTTCGTTTT 59.899 45.455 0.00 0.00 37.92 2.43
348 349 3.126073 GTGACGTACTCCCTTCGTTTTT 58.874 45.455 0.00 0.00 37.92 1.94
372 373 9.457436 TTTTAAAGAGTGTACTTCCAACTTTCT 57.543 29.630 0.00 0.00 31.02 2.52
373 374 9.457436 TTTAAAGAGTGTACTTCCAACTTTCTT 57.543 29.630 0.00 0.00 31.02 2.52
374 375 6.927294 AAGAGTGTACTTCCAACTTTCTTG 57.073 37.500 0.00 0.00 0.00 3.02
375 376 5.368989 AGAGTGTACTTCCAACTTTCTTGG 58.631 41.667 0.00 0.00 40.87 3.61
376 377 5.130477 AGAGTGTACTTCCAACTTTCTTGGA 59.870 40.000 0.00 0.00 46.08 3.53
388 389 5.324784 ACTTTCTTGGACAAAGTTTGACC 57.675 39.130 24.60 24.60 40.48 4.02
398 399 4.582441 CAAAGTTTGACCAAGTTTGTGC 57.418 40.909 10.19 0.00 45.37 4.57
399 400 3.951775 AAGTTTGACCAAGTTTGTGCA 57.048 38.095 0.00 0.00 0.00 4.57
400 401 3.951775 AGTTTGACCAAGTTTGTGCAA 57.048 38.095 0.00 0.00 0.00 4.08
401 402 4.264460 AGTTTGACCAAGTTTGTGCAAA 57.736 36.364 0.00 0.00 31.45 3.68
402 403 4.636249 AGTTTGACCAAGTTTGTGCAAAA 58.364 34.783 0.00 0.00 33.89 2.44
403 404 5.244755 AGTTTGACCAAGTTTGTGCAAAAT 58.755 33.333 0.00 0.00 33.89 1.82
404 405 6.402222 AGTTTGACCAAGTTTGTGCAAAATA 58.598 32.000 0.00 0.00 33.89 1.40
405 406 6.312672 AGTTTGACCAAGTTTGTGCAAAATAC 59.687 34.615 0.00 0.00 33.89 1.89
406 407 5.330455 TGACCAAGTTTGTGCAAAATACA 57.670 34.783 0.00 0.00 31.33 2.29
407 408 5.911752 TGACCAAGTTTGTGCAAAATACAT 58.088 33.333 0.00 0.00 31.33 2.29
408 409 5.982516 TGACCAAGTTTGTGCAAAATACATC 59.017 36.000 0.00 0.00 31.33 3.06
409 410 5.911752 ACCAAGTTTGTGCAAAATACATCA 58.088 33.333 0.00 0.00 31.33 3.07
410 411 6.344500 ACCAAGTTTGTGCAAAATACATCAA 58.656 32.000 0.00 0.00 31.33 2.57
411 412 6.991531 ACCAAGTTTGTGCAAAATACATCAAT 59.008 30.769 0.00 0.00 31.33 2.57
412 413 7.041916 ACCAAGTTTGTGCAAAATACATCAATG 60.042 33.333 0.00 0.00 31.33 2.82
413 414 7.041916 CCAAGTTTGTGCAAAATACATCAATGT 60.042 33.333 0.70 0.70 37.13 2.71
414 415 8.336806 CAAGTTTGTGCAAAATACATCAATGTT 58.663 29.630 0.20 0.00 35.80 2.71
415 416 8.436046 AGTTTGTGCAAAATACATCAATGTTT 57.564 26.923 0.20 0.00 35.80 2.83
416 417 8.336806 AGTTTGTGCAAAATACATCAATGTTTG 58.663 29.630 0.20 1.85 35.80 2.93
417 418 7.783090 TTGTGCAAAATACATCAATGTTTGT 57.217 28.000 0.20 0.00 41.97 2.83
418 419 7.175073 TGTGCAAAATACATCAATGTTTGTG 57.825 32.000 0.20 3.27 41.97 3.33
419 420 6.982724 TGTGCAAAATACATCAATGTTTGTGA 59.017 30.769 0.20 0.00 41.97 3.58
420 421 7.493645 TGTGCAAAATACATCAATGTTTGTGAA 59.506 29.630 0.20 0.00 41.97 3.18
421 422 8.333908 GTGCAAAATACATCAATGTTTGTGAAA 58.666 29.630 0.20 0.00 41.97 2.69
422 423 9.053840 TGCAAAATACATCAATGTTTGTGAAAT 57.946 25.926 0.20 0.00 41.97 2.17
423 424 9.532697 GCAAAATACATCAATGTTTGTGAAATC 57.467 29.630 0.20 0.00 41.97 2.17
430 431 9.426837 ACATCAATGTTTGTGAAATCAAATAGG 57.573 29.630 0.00 0.00 37.90 2.57
431 432 9.426837 CATCAATGTTTGTGAAATCAAATAGGT 57.573 29.630 0.00 0.00 39.09 3.08
482 483 9.599322 CGAATCTAATGTTACTAATTTGATGGC 57.401 33.333 0.00 0.00 32.33 4.40
555 556 9.803315 GTTTGATTCTTTAAGAAAGTTGGAAGT 57.197 29.630 11.63 0.00 37.82 3.01
558 559 9.621629 TGATTCTTTAAGAAAGTTGGAAGTACA 57.378 29.630 11.63 0.00 37.82 2.90
559 560 9.880064 GATTCTTTAAGAAAGTTGGAAGTACAC 57.120 33.333 11.63 0.00 37.82 2.90
560 561 9.628500 ATTCTTTAAGAAAGTTGGAAGTACACT 57.372 29.630 11.63 0.00 37.82 3.55
561 562 9.457436 TTCTTTAAGAAAGTTGGAAGTACACTT 57.543 29.630 4.77 0.00 39.52 3.16
562 563 9.457436 TCTTTAAGAAAGTTGGAAGTACACTTT 57.543 29.630 7.73 7.73 39.52 2.66
571 572 9.850628 AAGTTGGAAGTACACTTTTTAAAGAAC 57.149 29.630 9.09 4.68 39.31 3.01
572 573 9.016438 AGTTGGAAGTACACTTTTTAAAGAACA 57.984 29.630 9.09 0.00 39.31 3.18
573 574 9.797556 GTTGGAAGTACACTTTTTAAAGAACAT 57.202 29.630 9.09 0.00 39.31 2.71
574 575 9.796120 TTGGAAGTACACTTTTTAAAGAACATG 57.204 29.630 9.09 0.00 39.31 3.21
575 576 8.410141 TGGAAGTACACTTTTTAAAGAACATGG 58.590 33.333 9.09 0.00 39.31 3.66
576 577 8.626526 GGAAGTACACTTTTTAAAGAACATGGA 58.373 33.333 9.09 0.00 39.31 3.41
577 578 9.665264 GAAGTACACTTTTTAAAGAACATGGAG 57.335 33.333 9.09 0.00 39.31 3.86
578 579 8.166422 AGTACACTTTTTAAAGAACATGGAGG 57.834 34.615 9.09 0.00 39.31 4.30
579 580 6.405278 ACACTTTTTAAAGAACATGGAGGG 57.595 37.500 9.09 0.00 39.31 4.30
580 581 6.133356 ACACTTTTTAAAGAACATGGAGGGA 58.867 36.000 9.09 0.00 39.31 4.20
581 582 6.265422 ACACTTTTTAAAGAACATGGAGGGAG 59.735 38.462 9.09 0.00 39.31 4.30
582 583 6.265422 CACTTTTTAAAGAACATGGAGGGAGT 59.735 38.462 9.09 0.00 39.31 3.85
583 584 7.447238 CACTTTTTAAAGAACATGGAGGGAGTA 59.553 37.037 9.09 0.00 39.31 2.59
628 629 7.230849 AGCAATCTTACAAACCATCAAATCA 57.769 32.000 0.00 0.00 0.00 2.57
689 697 2.099592 ACACAGTTCGTTCAACCGACTA 59.900 45.455 0.00 0.00 36.42 2.59
692 700 4.919168 CACAGTTCGTTCAACCGACTATAA 59.081 41.667 0.00 0.00 36.42 0.98
694 702 5.632347 ACAGTTCGTTCAACCGACTATAAAG 59.368 40.000 0.00 0.00 36.42 1.85
707 718 5.593502 CCGACTATAAAGGACAAGTAGGAGT 59.406 44.000 0.00 0.00 37.02 3.85
742 753 2.692368 ATGACGAGTGGGGCCCAT 60.692 61.111 31.48 17.96 35.28 4.00
745 756 2.285069 ACGAGTGGGGCCCATGTA 60.285 61.111 31.48 1.05 35.28 2.29
791 802 0.249398 ACAGAAGCGGGCGACTTTAT 59.751 50.000 0.00 0.00 0.00 1.40
793 804 2.093869 ACAGAAGCGGGCGACTTTATTA 60.094 45.455 0.00 0.00 0.00 0.98
881 908 1.600916 GAGAAGGCACCACACCACC 60.601 63.158 0.00 0.00 0.00 4.61
1099 1203 0.041833 CCAGGTCTCCCTTCTCTCCA 59.958 60.000 0.00 0.00 39.89 3.86
1108 1231 1.339535 CCCTTCTCTCCACCTTCTTGC 60.340 57.143 0.00 0.00 0.00 4.01
1154 1279 2.635443 GGCGGTGGTGGTGAATTGG 61.635 63.158 0.00 0.00 0.00 3.16
1184 1324 3.981211 TGCCAAGTTTTCTGATTTGCTC 58.019 40.909 0.00 0.00 0.00 4.26
1211 1355 2.487532 GCTGTGATCCATGGCTGCC 61.488 63.158 12.87 12.87 0.00 4.85
1639 1789 1.306148 CATGCCACACTAGCAGATGG 58.694 55.000 0.00 0.00 44.90 3.51
1794 1957 1.699634 TCCTGTGAGTTTCTTCCAGGG 59.300 52.381 0.00 0.00 42.38 4.45
1803 1966 5.667626 TGAGTTTCTTCCAGGGCTATAGATT 59.332 40.000 3.21 0.00 0.00 2.40
1804 1967 6.844388 TGAGTTTCTTCCAGGGCTATAGATTA 59.156 38.462 3.21 0.00 0.00 1.75
1827 1991 9.705290 ATTATATACAATCGTGCTGTGATGTTA 57.295 29.630 0.00 0.00 0.00 2.41
1828 1992 9.705290 TTATATACAATCGTGCTGTGATGTTAT 57.295 29.630 0.00 0.00 0.00 1.89
1829 1993 6.925610 ATACAATCGTGCTGTGATGTTATT 57.074 33.333 0.00 0.00 0.00 1.40
1830 1994 5.627499 ACAATCGTGCTGTGATGTTATTT 57.373 34.783 0.00 0.00 0.00 1.40
1864 2030 2.669391 CGAAGCTTTTGGTTGGATCTGC 60.669 50.000 0.00 0.00 40.61 4.26
1868 2034 2.680577 CTTTTGGTTGGATCTGCTTGC 58.319 47.619 0.00 0.00 0.00 4.01
1896 2062 2.126424 GGACACGACGCCAGAGTC 60.126 66.667 0.00 0.00 37.76 3.36
2018 2184 2.230750 GGGATAATACCCCTTCGACTCG 59.769 54.545 0.00 0.00 43.81 4.18
2052 2218 1.981256 TCCTTTGCTGGAACTGGAAC 58.019 50.000 1.38 0.00 37.34 3.62
2080 2246 8.387190 TCATTTCATCGAAGATGCAGAAATAT 57.613 30.769 5.23 0.00 45.12 1.28
2171 2355 7.134815 CACTTCGTGATCTCAACAAAGAAAAT 58.865 34.615 0.00 0.00 35.23 1.82
2176 2360 8.352201 TCGTGATCTCAACAAAGAAAATGATTT 58.648 29.630 0.00 0.00 0.00 2.17
2521 2717 6.346096 TCAAATAATTAGACGGGACTGGAAG 58.654 40.000 0.00 0.00 42.29 3.46
2692 2963 6.148150 CCATTCCCAATGTTCTTTTGAATGTG 59.852 38.462 0.00 0.00 40.94 3.21
2842 3119 4.024670 AGGTACCCACTGATCTAGTTCAC 58.975 47.826 8.74 0.00 37.60 3.18
2998 3280 5.163530 TGCATTTACTCCCATTGCACTATTG 60.164 40.000 0.00 0.00 38.32 1.90
3229 3515 6.874288 AAATTTGACCTGTCTTCTCTTCTG 57.126 37.500 0.00 0.00 0.00 3.02
3271 3557 4.182339 GGATCGTTGAACTACTCTTTCCC 58.818 47.826 0.00 0.00 0.00 3.97
3283 3569 3.698289 ACTCTTTCCCGTGAGTATGAGA 58.302 45.455 0.00 0.00 41.19 3.27
3284 3570 3.444388 ACTCTTTCCCGTGAGTATGAGAC 59.556 47.826 0.00 0.00 41.19 3.36
3519 3820 2.367567 TGGCTCCGTGATAGGTAAATCC 59.632 50.000 0.00 0.00 0.00 3.01
3953 4611 8.400186 TCTTTACATCATATGCATGACAAGTTG 58.600 33.333 10.16 0.00 43.89 3.16
4218 4880 0.966920 GTGGTGGACTCCGAAAGAGA 59.033 55.000 0.00 0.00 46.50 3.10
4370 5036 7.577303 TCCCTTGCATATTTCTCAAAGATACT 58.423 34.615 0.00 0.00 0.00 2.12
4419 5109 7.475015 CCCTGACAATGTATGTGTTTATTGAG 58.525 38.462 0.00 0.00 44.12 3.02
4876 5586 7.811282 TGGCCTTGATCTAATGGTATTTTCTA 58.189 34.615 3.32 0.00 0.00 2.10
4908 5618 3.487376 CCGTGCACACTATAATGCCAAAG 60.487 47.826 18.64 0.00 41.33 2.77
4967 5677 2.026822 ACATTGACGGGAAGAGAGCATT 60.027 45.455 0.00 0.00 0.00 3.56
4982 5692 6.681777 AGAGAGCATTTGTTGTTTTATGGAC 58.318 36.000 0.00 0.00 0.00 4.02
5040 5750 8.494016 AAGGTATAGTTCTGCAATTTCTGTAC 57.506 34.615 0.00 0.00 0.00 2.90
5104 5825 2.290367 TGCGGTGCTATATGTTCATTGC 59.710 45.455 0.00 0.00 0.00 3.56
5148 5869 7.722728 AGTTCAGACCATAATATGCATGAATGT 59.277 33.333 10.16 0.00 31.72 2.71
5149 5870 8.355169 GTTCAGACCATAATATGCATGAATGTT 58.645 33.333 10.16 0.00 31.72 2.71
5150 5871 9.571816 TTCAGACCATAATATGCATGAATGTTA 57.428 29.630 10.16 5.42 0.00 2.41
5151 5872 9.571816 TCAGACCATAATATGCATGAATGTTAA 57.428 29.630 10.16 0.00 0.00 2.01
5152 5873 9.616634 CAGACCATAATATGCATGAATGTTAAC 57.383 33.333 10.16 0.00 0.00 2.01
5153 5874 8.796475 AGACCATAATATGCATGAATGTTAACC 58.204 33.333 10.16 0.00 0.00 2.85
5154 5875 8.710749 ACCATAATATGCATGAATGTTAACCT 57.289 30.769 10.16 0.00 0.00 3.50
5155 5876 9.806448 ACCATAATATGCATGAATGTTAACCTA 57.194 29.630 10.16 0.00 0.00 3.08
5161 5882 6.135290 TGCATGAATGTTAACCTATTCAGC 57.865 37.500 19.94 20.47 43.97 4.26
5162 5883 5.207768 GCATGAATGTTAACCTATTCAGCG 58.792 41.667 19.94 15.84 43.97 5.18
5163 5884 4.875544 TGAATGTTAACCTATTCAGCGC 57.124 40.909 14.26 0.00 38.12 5.92
5164 5885 3.625764 TGAATGTTAACCTATTCAGCGCC 59.374 43.478 14.26 0.00 38.12 6.53
5165 5886 2.772077 TGTTAACCTATTCAGCGCCA 57.228 45.000 2.29 0.00 0.00 5.69
5166 5887 3.275617 TGTTAACCTATTCAGCGCCAT 57.724 42.857 2.29 0.00 0.00 4.40
5167 5888 2.942376 TGTTAACCTATTCAGCGCCATG 59.058 45.455 2.29 0.00 0.00 3.66
5168 5889 1.593196 TAACCTATTCAGCGCCATGC 58.407 50.000 2.29 0.00 46.98 4.06
5177 5898 3.113745 GCGCCATGCAGCAATAGT 58.886 55.556 0.00 0.00 45.45 2.12
5565 6290 3.618351 CTGACCATCTCCTCATTGCTTT 58.382 45.455 0.00 0.00 0.00 3.51
5894 7223 4.712873 GTTCGCCGTTTGTCGCCG 62.713 66.667 0.00 0.00 41.71 6.46
5915 7244 5.124457 GCCGAATGCAAACAGGATATATCAT 59.876 40.000 14.60 4.42 40.77 2.45
5989 7318 6.486248 CAGACGTTTTCAATGAAGTTGAGAA 58.514 36.000 0.00 0.00 46.85 2.87
6099 7434 7.740346 CACAAGCTTTCAACGTGTAATTAGTAG 59.260 37.037 0.00 0.00 0.00 2.57
6100 7435 7.440255 ACAAGCTTTCAACGTGTAATTAGTAGT 59.560 33.333 0.00 0.00 0.00 2.73
6101 7436 8.918658 CAAGCTTTCAACGTGTAATTAGTAGTA 58.081 33.333 0.00 0.00 0.00 1.82
6478 7815 5.462530 AATCCCCAAACTTTTTAGAACCG 57.537 39.130 0.00 0.00 0.00 4.44
6479 7816 3.900971 TCCCCAAACTTTTTAGAACCGT 58.099 40.909 0.00 0.00 0.00 4.83
6480 7817 3.633065 TCCCCAAACTTTTTAGAACCGTG 59.367 43.478 0.00 0.00 0.00 4.94
6481 7818 3.633065 CCCCAAACTTTTTAGAACCGTGA 59.367 43.478 0.00 0.00 0.00 4.35
6977 8362 7.040823 TCACAAATTTTGCTGGTTTTGTTTTCT 60.041 29.630 9.04 0.00 39.55 2.52
6978 8363 7.271008 CACAAATTTTGCTGGTTTTGTTTTCTC 59.729 33.333 9.04 0.00 39.55 2.87
6986 8371 6.071391 TGCTGGTTTTGTTTTCTCTTTTCTCT 60.071 34.615 0.00 0.00 0.00 3.10
7075 8467 8.412456 TCAGAACATTTTAGAATTTTGCAGTCA 58.588 29.630 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.811236 ACATTATTGAAAGTCGTCTCTTCGTTA 59.189 33.333 0.00 0.00 0.00 3.18
4 5 6.687655 CGACATTATTGAAAGTCGTCTCTTC 58.312 40.000 7.15 0.00 46.46 2.87
5 6 6.633668 CGACATTATTGAAAGTCGTCTCTT 57.366 37.500 7.15 0.00 46.46 2.85
13 14 5.278266 CCAACCACACGACATTATTGAAAGT 60.278 40.000 0.00 0.00 0.00 2.66
15 16 4.822350 TCCAACCACACGACATTATTGAAA 59.178 37.500 0.00 0.00 0.00 2.69
16 17 4.214545 GTCCAACCACACGACATTATTGAA 59.785 41.667 0.00 0.00 0.00 2.69
17 18 3.749088 GTCCAACCACACGACATTATTGA 59.251 43.478 0.00 0.00 0.00 2.57
18 19 3.424302 CGTCCAACCACACGACATTATTG 60.424 47.826 0.00 0.00 38.32 1.90
19 20 2.739913 CGTCCAACCACACGACATTATT 59.260 45.455 0.00 0.00 38.32 1.40
20 21 2.289195 ACGTCCAACCACACGACATTAT 60.289 45.455 0.00 0.00 39.38 1.28
21 22 1.068895 ACGTCCAACCACACGACATTA 59.931 47.619 0.00 0.00 39.38 1.90
22 23 0.179067 ACGTCCAACCACACGACATT 60.179 50.000 0.00 0.00 39.38 2.71
23 24 0.878523 CACGTCCAACCACACGACAT 60.879 55.000 0.00 0.00 39.38 3.06
24 25 1.519676 CACGTCCAACCACACGACA 60.520 57.895 0.00 0.00 39.38 4.35
25 26 1.227031 TCACGTCCAACCACACGAC 60.227 57.895 0.00 0.00 39.38 4.34
26 27 1.227031 GTCACGTCCAACCACACGA 60.227 57.895 0.00 0.00 39.38 4.35
27 28 2.582265 CGTCACGTCCAACCACACG 61.582 63.158 0.00 0.00 41.90 4.49
28 29 0.806884 TTCGTCACGTCCAACCACAC 60.807 55.000 0.00 0.00 0.00 3.82
29 30 0.528901 CTTCGTCACGTCCAACCACA 60.529 55.000 0.00 0.00 0.00 4.17
30 31 0.249155 TCTTCGTCACGTCCAACCAC 60.249 55.000 0.00 0.00 0.00 4.16
31 32 0.031585 CTCTTCGTCACGTCCAACCA 59.968 55.000 0.00 0.00 0.00 3.67
32 33 0.666577 CCTCTTCGTCACGTCCAACC 60.667 60.000 0.00 0.00 0.00 3.77
33 34 0.313043 TCCTCTTCGTCACGTCCAAC 59.687 55.000 0.00 0.00 0.00 3.77
34 35 0.313043 GTCCTCTTCGTCACGTCCAA 59.687 55.000 0.00 0.00 0.00 3.53
35 36 0.536687 AGTCCTCTTCGTCACGTCCA 60.537 55.000 0.00 0.00 0.00 4.02
36 37 0.109689 CAGTCCTCTTCGTCACGTCC 60.110 60.000 0.00 0.00 0.00 4.79
37 38 0.592148 ACAGTCCTCTTCGTCACGTC 59.408 55.000 0.00 0.00 0.00 4.34
38 39 0.311165 CACAGTCCTCTTCGTCACGT 59.689 55.000 0.00 0.00 0.00 4.49
39 40 1.004277 GCACAGTCCTCTTCGTCACG 61.004 60.000 0.00 0.00 0.00 4.35
40 41 0.315568 AGCACAGTCCTCTTCGTCAC 59.684 55.000 0.00 0.00 0.00 3.67
41 42 0.598562 GAGCACAGTCCTCTTCGTCA 59.401 55.000 0.00 0.00 0.00 4.35
42 43 0.455295 CGAGCACAGTCCTCTTCGTC 60.455 60.000 0.00 0.00 0.00 4.20
43 44 1.173444 ACGAGCACAGTCCTCTTCGT 61.173 55.000 0.00 0.00 0.00 3.85
44 45 0.730834 CACGAGCACAGTCCTCTTCG 60.731 60.000 0.00 0.00 0.00 3.79
45 46 1.011451 GCACGAGCACAGTCCTCTTC 61.011 60.000 0.00 0.00 41.58 2.87
46 47 1.005630 GCACGAGCACAGTCCTCTT 60.006 57.895 0.00 0.00 41.58 2.85
47 48 0.609406 TAGCACGAGCACAGTCCTCT 60.609 55.000 7.77 0.00 45.49 3.69
48 49 0.179150 CTAGCACGAGCACAGTCCTC 60.179 60.000 7.77 0.00 45.49 3.71
49 50 1.886585 CTAGCACGAGCACAGTCCT 59.113 57.895 7.77 0.00 45.49 3.85
50 51 1.807573 GCTAGCACGAGCACAGTCC 60.808 63.158 10.63 0.00 45.49 3.85
51 52 2.155194 CGCTAGCACGAGCACAGTC 61.155 63.158 16.45 0.28 45.49 3.51
52 53 2.126307 CGCTAGCACGAGCACAGT 60.126 61.111 16.45 0.00 45.49 3.55
53 54 3.549150 GCGCTAGCACGAGCACAG 61.549 66.667 16.45 4.88 45.49 3.66
61 62 2.523041 ACGAAAGTTGAGCGCTAGCAC 61.523 52.381 11.50 7.53 46.40 4.40
62 63 0.319555 ACGAAAGTTGAGCGCTAGCA 60.320 50.000 11.50 0.98 46.40 3.49
63 64 2.446341 ACGAAAGTTGAGCGCTAGC 58.554 52.632 11.50 4.06 46.40 3.42
77 78 9.158233 CCATATAAAAGAAGTTACCAGAACGAA 57.842 33.333 0.00 0.00 0.00 3.85
78 79 8.533657 TCCATATAAAAGAAGTTACCAGAACGA 58.466 33.333 0.00 0.00 0.00 3.85
79 80 8.712285 TCCATATAAAAGAAGTTACCAGAACG 57.288 34.615 0.00 0.00 0.00 3.95
97 98 9.996554 ACATCAAACGAGTATCATTTCCATATA 57.003 29.630 0.00 0.00 33.17 0.86
98 99 8.777413 CACATCAAACGAGTATCATTTCCATAT 58.223 33.333 0.00 0.00 33.17 1.78
99 100 7.226523 CCACATCAAACGAGTATCATTTCCATA 59.773 37.037 0.00 0.00 33.17 2.74
100 101 6.038603 CCACATCAAACGAGTATCATTTCCAT 59.961 38.462 0.00 0.00 33.17 3.41
101 102 5.353956 CCACATCAAACGAGTATCATTTCCA 59.646 40.000 0.00 0.00 33.17 3.53
102 103 5.730568 GCCACATCAAACGAGTATCATTTCC 60.731 44.000 0.00 0.00 33.17 3.13
103 104 5.065218 AGCCACATCAAACGAGTATCATTTC 59.935 40.000 0.00 0.00 33.17 2.17
104 105 4.943705 AGCCACATCAAACGAGTATCATTT 59.056 37.500 0.00 0.00 33.17 2.32
105 106 4.517285 AGCCACATCAAACGAGTATCATT 58.483 39.130 0.00 0.00 33.17 2.57
106 107 4.122776 GAGCCACATCAAACGAGTATCAT 58.877 43.478 0.00 0.00 33.17 2.45
107 108 3.195610 AGAGCCACATCAAACGAGTATCA 59.804 43.478 0.00 0.00 33.17 2.15
108 109 3.786635 AGAGCCACATCAAACGAGTATC 58.213 45.455 0.00 0.00 0.00 2.24
109 110 3.735208 CGAGAGCCACATCAAACGAGTAT 60.735 47.826 0.00 0.00 0.00 2.12
110 111 2.415491 CGAGAGCCACATCAAACGAGTA 60.415 50.000 0.00 0.00 0.00 2.59
111 112 1.670087 CGAGAGCCACATCAAACGAGT 60.670 52.381 0.00 0.00 0.00 4.18
112 113 0.994995 CGAGAGCCACATCAAACGAG 59.005 55.000 0.00 0.00 0.00 4.18
113 114 0.601057 TCGAGAGCCACATCAAACGA 59.399 50.000 0.00 0.00 0.00 3.85
114 115 1.590238 GATCGAGAGCCACATCAAACG 59.410 52.381 0.00 0.00 0.00 3.60
115 116 2.621338 TGATCGAGAGCCACATCAAAC 58.379 47.619 0.00 0.00 0.00 2.93
116 117 3.200483 CATGATCGAGAGCCACATCAAA 58.800 45.455 0.00 0.00 0.00 2.69
117 118 2.169144 ACATGATCGAGAGCCACATCAA 59.831 45.455 0.00 0.00 0.00 2.57
118 119 1.758862 ACATGATCGAGAGCCACATCA 59.241 47.619 0.00 0.00 0.00 3.07
119 120 2.223900 TGACATGATCGAGAGCCACATC 60.224 50.000 0.00 0.00 0.00 3.06
120 121 1.758862 TGACATGATCGAGAGCCACAT 59.241 47.619 0.00 0.00 0.00 3.21
121 122 1.185315 TGACATGATCGAGAGCCACA 58.815 50.000 0.00 0.00 0.00 4.17
122 123 2.223900 TGATGACATGATCGAGAGCCAC 60.224 50.000 0.00 0.00 0.00 5.01
123 124 2.034124 TGATGACATGATCGAGAGCCA 58.966 47.619 0.00 0.00 0.00 4.75
124 125 2.808523 TGATGACATGATCGAGAGCC 57.191 50.000 0.00 0.00 0.00 4.70
125 126 4.152045 GGAAATGATGACATGATCGAGAGC 59.848 45.833 0.00 0.00 36.79 4.09
126 127 5.539979 AGGAAATGATGACATGATCGAGAG 58.460 41.667 0.00 0.00 36.79 3.20
127 128 5.510349 GGAGGAAATGATGACATGATCGAGA 60.510 44.000 0.00 0.00 36.79 4.04
128 129 4.689812 GGAGGAAATGATGACATGATCGAG 59.310 45.833 0.00 0.00 36.79 4.04
129 130 4.346127 AGGAGGAAATGATGACATGATCGA 59.654 41.667 0.00 0.00 36.79 3.59
130 131 4.639334 AGGAGGAAATGATGACATGATCG 58.361 43.478 0.00 0.00 36.79 3.69
131 132 6.956202 AAAGGAGGAAATGATGACATGATC 57.044 37.500 0.00 0.00 36.79 2.92
132 133 7.729124 AAAAAGGAGGAAATGATGACATGAT 57.271 32.000 0.00 0.00 36.79 2.45
133 134 7.122650 GGTAAAAAGGAGGAAATGATGACATGA 59.877 37.037 0.00 0.00 36.79 3.07
134 135 7.260603 GGTAAAAAGGAGGAAATGATGACATG 58.739 38.462 0.00 0.00 36.79 3.21
135 136 6.381133 GGGTAAAAAGGAGGAAATGATGACAT 59.619 38.462 0.00 0.00 38.50 3.06
136 137 5.714806 GGGTAAAAAGGAGGAAATGATGACA 59.285 40.000 0.00 0.00 0.00 3.58
137 138 5.127194 GGGGTAAAAAGGAGGAAATGATGAC 59.873 44.000 0.00 0.00 0.00 3.06
138 139 5.269189 GGGGTAAAAAGGAGGAAATGATGA 58.731 41.667 0.00 0.00 0.00 2.92
139 140 4.405680 GGGGGTAAAAAGGAGGAAATGATG 59.594 45.833 0.00 0.00 0.00 3.07
140 141 4.297664 AGGGGGTAAAAAGGAGGAAATGAT 59.702 41.667 0.00 0.00 0.00 2.45
141 142 3.665618 AGGGGGTAAAAAGGAGGAAATGA 59.334 43.478 0.00 0.00 0.00 2.57
142 143 4.061131 AGGGGGTAAAAAGGAGGAAATG 57.939 45.455 0.00 0.00 0.00 2.32
143 144 4.777877 AAGGGGGTAAAAAGGAGGAAAT 57.222 40.909 0.00 0.00 0.00 2.17
144 145 4.485875 GAAAGGGGGTAAAAAGGAGGAAA 58.514 43.478 0.00 0.00 0.00 3.13
145 146 3.181415 GGAAAGGGGGTAAAAAGGAGGAA 60.181 47.826 0.00 0.00 0.00 3.36
146 147 2.380932 GGAAAGGGGGTAAAAAGGAGGA 59.619 50.000 0.00 0.00 0.00 3.71
147 148 2.816411 GGAAAGGGGGTAAAAAGGAGG 58.184 52.381 0.00 0.00 0.00 4.30
148 149 2.443416 CGGAAAGGGGGTAAAAAGGAG 58.557 52.381 0.00 0.00 0.00 3.69
149 150 1.548355 GCGGAAAGGGGGTAAAAAGGA 60.548 52.381 0.00 0.00 0.00 3.36
150 151 0.892755 GCGGAAAGGGGGTAAAAAGG 59.107 55.000 0.00 0.00 0.00 3.11
151 152 1.544246 CTGCGGAAAGGGGGTAAAAAG 59.456 52.381 0.00 0.00 0.00 2.27
152 153 1.623163 CTGCGGAAAGGGGGTAAAAA 58.377 50.000 0.00 0.00 0.00 1.94
153 154 0.896479 GCTGCGGAAAGGGGGTAAAA 60.896 55.000 0.00 0.00 0.00 1.52
154 155 1.303806 GCTGCGGAAAGGGGGTAAA 60.304 57.895 0.00 0.00 0.00 2.01
155 156 1.858739 ATGCTGCGGAAAGGGGGTAA 61.859 55.000 0.00 0.00 0.00 2.85
156 157 1.858739 AATGCTGCGGAAAGGGGGTA 61.859 55.000 0.00 0.00 0.00 3.69
157 158 3.224007 AATGCTGCGGAAAGGGGGT 62.224 57.895 0.00 0.00 0.00 4.95
158 159 2.362889 AATGCTGCGGAAAGGGGG 60.363 61.111 0.00 0.00 0.00 5.40
159 160 1.678635 TCAATGCTGCGGAAAGGGG 60.679 57.895 0.00 0.00 0.00 4.79
160 161 1.243342 TGTCAATGCTGCGGAAAGGG 61.243 55.000 0.00 0.00 0.00 3.95
161 162 0.597568 TTGTCAATGCTGCGGAAAGG 59.402 50.000 0.00 0.00 0.00 3.11
162 163 2.420628 TTTGTCAATGCTGCGGAAAG 57.579 45.000 0.00 0.00 0.00 2.62
163 164 2.159184 TGTTTTGTCAATGCTGCGGAAA 60.159 40.909 0.00 0.00 0.00 3.13
164 165 1.406898 TGTTTTGTCAATGCTGCGGAA 59.593 42.857 0.00 0.00 0.00 4.30
165 166 1.028130 TGTTTTGTCAATGCTGCGGA 58.972 45.000 0.00 0.00 0.00 5.54
166 167 1.850377 TTGTTTTGTCAATGCTGCGG 58.150 45.000 0.00 0.00 0.00 5.69
167 168 3.921969 TTTTGTTTTGTCAATGCTGCG 57.078 38.095 0.00 0.00 0.00 5.18
168 169 5.808403 TCATTTTTGTTTTGTCAATGCTGC 58.192 33.333 0.00 0.00 0.00 5.25
169 170 8.844441 AAATCATTTTTGTTTTGTCAATGCTG 57.156 26.923 0.00 0.00 0.00 4.41
174 175 9.766277 GCTGTAAAATCATTTTTGTTTTGTCAA 57.234 25.926 0.00 0.00 35.82 3.18
175 176 8.939929 TGCTGTAAAATCATTTTTGTTTTGTCA 58.060 25.926 0.00 0.00 35.82 3.58
176 177 9.934190 ATGCTGTAAAATCATTTTTGTTTTGTC 57.066 25.926 0.00 0.00 35.82 3.18
179 180 9.649024 CGAATGCTGTAAAATCATTTTTGTTTT 57.351 25.926 0.00 0.00 35.82 2.43
180 181 7.798052 GCGAATGCTGTAAAATCATTTTTGTTT 59.202 29.630 0.00 0.00 35.91 2.83
181 182 7.042187 TGCGAATGCTGTAAAATCATTTTTGTT 60.042 29.630 0.00 0.00 43.34 2.83
182 183 6.423302 TGCGAATGCTGTAAAATCATTTTTGT 59.577 30.769 0.00 0.00 43.34 2.83
183 184 6.819437 TGCGAATGCTGTAAAATCATTTTTG 58.181 32.000 0.00 0.00 43.34 2.44
184 185 7.418840 TTGCGAATGCTGTAAAATCATTTTT 57.581 28.000 0.00 0.00 43.34 1.94
185 186 7.599630 ATTGCGAATGCTGTAAAATCATTTT 57.400 28.000 0.02 0.02 43.34 1.82
186 187 7.599630 AATTGCGAATGCTGTAAAATCATTT 57.400 28.000 0.00 0.00 43.34 2.32
187 188 8.876275 ATAATTGCGAATGCTGTAAAATCATT 57.124 26.923 0.00 0.00 43.34 2.57
188 189 8.136800 TGATAATTGCGAATGCTGTAAAATCAT 58.863 29.630 0.00 0.00 43.34 2.45
189 190 7.431960 GTGATAATTGCGAATGCTGTAAAATCA 59.568 33.333 0.00 0.00 43.34 2.57
190 191 7.645340 AGTGATAATTGCGAATGCTGTAAAATC 59.355 33.333 0.00 0.00 43.34 2.17
191 192 7.483307 AGTGATAATTGCGAATGCTGTAAAAT 58.517 30.769 0.00 0.00 43.34 1.82
192 193 6.851609 AGTGATAATTGCGAATGCTGTAAAA 58.148 32.000 0.00 0.00 43.34 1.52
193 194 6.435430 AGTGATAATTGCGAATGCTGTAAA 57.565 33.333 0.00 0.00 43.34 2.01
194 195 6.435430 AAGTGATAATTGCGAATGCTGTAA 57.565 33.333 0.00 0.00 43.34 2.41
195 196 6.435430 AAAGTGATAATTGCGAATGCTGTA 57.565 33.333 0.00 0.00 43.34 2.74
196 197 4.970662 AAGTGATAATTGCGAATGCTGT 57.029 36.364 0.00 0.00 43.34 4.40
197 198 6.636666 AAAAAGTGATAATTGCGAATGCTG 57.363 33.333 0.00 0.00 43.34 4.41
225 226 4.717233 AGTGATAATTGCAAATTCCGCA 57.283 36.364 1.71 0.00 37.68 5.69
226 227 6.265577 AGTTAGTGATAATTGCAAATTCCGC 58.734 36.000 1.71 0.40 0.00 5.54
227 228 9.950680 ATTAGTTAGTGATAATTGCAAATTCCG 57.049 29.630 1.71 0.00 0.00 4.30
232 233 8.556194 CGCCTATTAGTTAGTGATAATTGCAAA 58.444 33.333 1.71 0.00 0.00 3.68
233 234 7.929245 TCGCCTATTAGTTAGTGATAATTGCAA 59.071 33.333 0.00 0.00 0.00 4.08
234 235 7.384115 GTCGCCTATTAGTTAGTGATAATTGCA 59.616 37.037 0.00 0.00 0.00 4.08
235 236 7.599245 AGTCGCCTATTAGTTAGTGATAATTGC 59.401 37.037 0.00 0.00 0.00 3.56
236 237 9.477484 AAGTCGCCTATTAGTTAGTGATAATTG 57.523 33.333 0.00 0.00 0.00 2.32
237 238 9.477484 CAAGTCGCCTATTAGTTAGTGATAATT 57.523 33.333 0.00 0.00 0.00 1.40
238 239 8.857098 TCAAGTCGCCTATTAGTTAGTGATAAT 58.143 33.333 0.00 0.00 0.00 1.28
239 240 8.229253 TCAAGTCGCCTATTAGTTAGTGATAA 57.771 34.615 0.00 0.00 0.00 1.75
240 241 7.812690 TCAAGTCGCCTATTAGTTAGTGATA 57.187 36.000 0.00 0.00 0.00 2.15
241 242 6.710597 TCAAGTCGCCTATTAGTTAGTGAT 57.289 37.500 0.00 0.00 0.00 3.06
242 243 6.152323 AGTTCAAGTCGCCTATTAGTTAGTGA 59.848 38.462 0.00 0.00 0.00 3.41
243 244 6.253727 CAGTTCAAGTCGCCTATTAGTTAGTG 59.746 42.308 0.00 0.00 0.00 2.74
244 245 6.152323 TCAGTTCAAGTCGCCTATTAGTTAGT 59.848 38.462 0.00 0.00 0.00 2.24
245 246 6.561614 TCAGTTCAAGTCGCCTATTAGTTAG 58.438 40.000 0.00 0.00 0.00 2.34
246 247 6.519679 TCAGTTCAAGTCGCCTATTAGTTA 57.480 37.500 0.00 0.00 0.00 2.24
247 248 5.401531 TCAGTTCAAGTCGCCTATTAGTT 57.598 39.130 0.00 0.00 0.00 2.24
248 249 5.105310 ACATCAGTTCAAGTCGCCTATTAGT 60.105 40.000 0.00 0.00 0.00 2.24
249 250 5.352284 ACATCAGTTCAAGTCGCCTATTAG 58.648 41.667 0.00 0.00 0.00 1.73
250 251 5.339008 ACATCAGTTCAAGTCGCCTATTA 57.661 39.130 0.00 0.00 0.00 0.98
251 252 4.207891 ACATCAGTTCAAGTCGCCTATT 57.792 40.909 0.00 0.00 0.00 1.73
252 253 3.895232 ACATCAGTTCAAGTCGCCTAT 57.105 42.857 0.00 0.00 0.00 2.57
253 254 3.678056 AACATCAGTTCAAGTCGCCTA 57.322 42.857 0.00 0.00 30.46 3.93
254 255 2.550830 AACATCAGTTCAAGTCGCCT 57.449 45.000 0.00 0.00 30.46 5.52
313 314 8.189460 GGGAGTACGTCACATATAGGATAAATC 58.811 40.741 0.00 0.00 0.00 2.17
314 315 7.894364 AGGGAGTACGTCACATATAGGATAAAT 59.106 37.037 0.00 0.00 0.00 1.40
315 316 7.236529 AGGGAGTACGTCACATATAGGATAAA 58.763 38.462 0.00 0.00 0.00 1.40
316 317 6.787170 AGGGAGTACGTCACATATAGGATAA 58.213 40.000 0.00 0.00 0.00 1.75
317 318 6.384342 AGGGAGTACGTCACATATAGGATA 57.616 41.667 0.00 0.00 0.00 2.59
318 319 5.258216 AGGGAGTACGTCACATATAGGAT 57.742 43.478 0.00 0.00 0.00 3.24
319 320 4.719026 AGGGAGTACGTCACATATAGGA 57.281 45.455 0.00 0.00 0.00 2.94
320 321 4.083431 CGAAGGGAGTACGTCACATATAGG 60.083 50.000 0.00 0.00 0.00 2.57
321 322 4.514441 ACGAAGGGAGTACGTCACATATAG 59.486 45.833 0.00 0.00 35.33 1.31
322 323 4.454678 ACGAAGGGAGTACGTCACATATA 58.545 43.478 0.00 0.00 35.33 0.86
323 324 3.285484 ACGAAGGGAGTACGTCACATAT 58.715 45.455 0.00 0.00 35.33 1.78
324 325 2.715046 ACGAAGGGAGTACGTCACATA 58.285 47.619 0.00 0.00 35.33 2.29
325 326 1.542492 ACGAAGGGAGTACGTCACAT 58.458 50.000 0.00 0.00 35.33 3.21
326 327 1.321474 AACGAAGGGAGTACGTCACA 58.679 50.000 0.00 0.00 39.31 3.58
327 328 2.428888 AAACGAAGGGAGTACGTCAC 57.571 50.000 0.00 0.00 39.31 3.67
328 329 3.457610 AAAAACGAAGGGAGTACGTCA 57.542 42.857 0.00 0.00 39.31 4.35
346 347 9.457436 AGAAAGTTGGAAGTACACTCTTTAAAA 57.543 29.630 0.00 0.00 30.46 1.52
347 348 9.457436 AAGAAAGTTGGAAGTACACTCTTTAAA 57.543 29.630 0.00 0.00 30.46 1.52
348 349 8.889717 CAAGAAAGTTGGAAGTACACTCTTTAA 58.110 33.333 0.00 0.00 30.46 1.52
349 350 7.497909 CCAAGAAAGTTGGAAGTACACTCTTTA 59.502 37.037 0.00 0.00 42.06 1.85
350 351 6.318900 CCAAGAAAGTTGGAAGTACACTCTTT 59.681 38.462 0.00 0.00 42.06 2.52
351 352 5.823045 CCAAGAAAGTTGGAAGTACACTCTT 59.177 40.000 0.00 0.00 42.06 2.85
352 353 5.130477 TCCAAGAAAGTTGGAAGTACACTCT 59.870 40.000 3.95 0.00 44.90 3.24
353 354 5.365619 TCCAAGAAAGTTGGAAGTACACTC 58.634 41.667 3.95 0.00 44.90 3.51
354 355 5.367945 TCCAAGAAAGTTGGAAGTACACT 57.632 39.130 3.95 0.00 44.90 3.55
366 367 4.770010 TGGTCAAACTTTGTCCAAGAAAGT 59.230 37.500 15.56 0.00 44.01 2.66
367 368 5.323371 TGGTCAAACTTTGTCCAAGAAAG 57.677 39.130 15.56 0.00 44.01 2.62
373 374 4.282195 ACAAACTTGGTCAAACTTTGTCCA 59.718 37.500 14.34 14.34 45.01 4.02
374 375 4.625311 CACAAACTTGGTCAAACTTTGTCC 59.375 41.667 10.02 10.02 39.00 4.02
375 376 4.091365 GCACAAACTTGGTCAAACTTTGTC 59.909 41.667 12.49 0.00 32.94 3.18
376 377 3.993736 GCACAAACTTGGTCAAACTTTGT 59.006 39.130 10.77 10.77 34.31 2.83
377 378 3.993081 TGCACAAACTTGGTCAAACTTTG 59.007 39.130 0.00 0.00 0.00 2.77
378 379 4.264460 TGCACAAACTTGGTCAAACTTT 57.736 36.364 0.00 0.00 0.00 2.66
379 380 3.951775 TGCACAAACTTGGTCAAACTT 57.048 38.095 0.00 0.00 0.00 2.66
380 381 3.951775 TTGCACAAACTTGGTCAAACT 57.048 38.095 0.00 0.00 0.00 2.66
381 382 4.999751 TTTTGCACAAACTTGGTCAAAC 57.000 36.364 9.43 0.00 35.14 2.93
382 383 6.166279 TGTATTTTGCACAAACTTGGTCAAA 58.834 32.000 0.00 7.05 34.30 2.69
383 384 5.724328 TGTATTTTGCACAAACTTGGTCAA 58.276 33.333 0.00 0.00 0.00 3.18
384 385 5.330455 TGTATTTTGCACAAACTTGGTCA 57.670 34.783 0.00 0.00 0.00 4.02
385 386 5.982516 TGATGTATTTTGCACAAACTTGGTC 59.017 36.000 0.00 0.00 0.00 4.02
386 387 5.911752 TGATGTATTTTGCACAAACTTGGT 58.088 33.333 0.00 0.00 0.00 3.67
387 388 6.841443 TTGATGTATTTTGCACAAACTTGG 57.159 33.333 0.00 0.00 0.00 3.61
388 389 7.853524 ACATTGATGTATTTTGCACAAACTTG 58.146 30.769 0.00 0.00 39.68 3.16
389 390 8.436046 AACATTGATGTATTTTGCACAAACTT 57.564 26.923 0.00 0.00 40.80 2.66
390 391 8.336806 CAAACATTGATGTATTTTGCACAAACT 58.663 29.630 0.00 0.00 40.80 2.66
391 392 8.121708 ACAAACATTGATGTATTTTGCACAAAC 58.878 29.630 0.00 0.00 40.80 2.93
392 393 8.121086 CACAAACATTGATGTATTTTGCACAAA 58.879 29.630 0.00 0.00 40.80 2.83
393 394 7.493645 TCACAAACATTGATGTATTTTGCACAA 59.506 29.630 0.00 0.00 40.80 3.33
394 395 6.982724 TCACAAACATTGATGTATTTTGCACA 59.017 30.769 0.00 0.00 40.80 4.57
395 396 7.405469 TCACAAACATTGATGTATTTTGCAC 57.595 32.000 0.00 0.00 40.80 4.57
396 397 8.429493 TTTCACAAACATTGATGTATTTTGCA 57.571 26.923 0.00 0.00 40.80 4.08
397 398 9.532697 GATTTCACAAACATTGATGTATTTTGC 57.467 29.630 0.00 0.00 40.80 3.68
404 405 9.426837 CCTATTTGATTTCACAAACATTGATGT 57.573 29.630 0.00 0.00 41.49 3.06
405 406 9.426837 ACCTATTTGATTTCACAAACATTGATG 57.573 29.630 0.00 0.00 41.49 3.07
456 457 9.599322 GCCATCAAATTAGTAACATTAGATTCG 57.401 33.333 0.00 0.00 0.00 3.34
529 530 9.803315 ACTTCCAACTTTCTTAAAGAATCAAAC 57.197 29.630 6.41 0.00 41.02 2.93
532 533 9.621629 TGTACTTCCAACTTTCTTAAAGAATCA 57.378 29.630 6.41 0.00 41.02 2.57
533 534 9.880064 GTGTACTTCCAACTTTCTTAAAGAATC 57.120 33.333 6.41 0.00 41.02 2.52
534 535 9.628500 AGTGTACTTCCAACTTTCTTAAAGAAT 57.372 29.630 6.41 0.00 41.02 2.40
535 536 9.457436 AAGTGTACTTCCAACTTTCTTAAAGAA 57.543 29.630 6.41 0.00 41.02 2.52
536 537 9.457436 AAAGTGTACTTCCAACTTTCTTAAAGA 57.543 29.630 6.41 0.00 39.34 2.52
545 546 9.850628 GTTCTTTAAAAAGTGTACTTCCAACTT 57.149 29.630 0.00 0.00 37.31 2.66
546 547 9.016438 TGTTCTTTAAAAAGTGTACTTCCAACT 57.984 29.630 0.00 0.00 37.31 3.16
547 548 9.797556 ATGTTCTTTAAAAAGTGTACTTCCAAC 57.202 29.630 0.00 0.00 37.31 3.77
548 549 9.796120 CATGTTCTTTAAAAAGTGTACTTCCAA 57.204 29.630 0.00 0.00 37.31 3.53
549 550 8.410141 CCATGTTCTTTAAAAAGTGTACTTCCA 58.590 33.333 0.00 0.00 37.31 3.53
550 551 8.626526 TCCATGTTCTTTAAAAAGTGTACTTCC 58.373 33.333 0.00 0.00 37.31 3.46
551 552 9.665264 CTCCATGTTCTTTAAAAAGTGTACTTC 57.335 33.333 0.00 0.00 37.31 3.01
552 553 8.630037 CCTCCATGTTCTTTAAAAAGTGTACTT 58.370 33.333 2.58 0.00 37.31 2.24
553 554 7.230712 CCCTCCATGTTCTTTAAAAAGTGTACT 59.769 37.037 2.58 0.00 37.31 2.73
554 555 7.229907 TCCCTCCATGTTCTTTAAAAAGTGTAC 59.770 37.037 2.58 0.00 37.31 2.90
555 556 7.291566 TCCCTCCATGTTCTTTAAAAAGTGTA 58.708 34.615 2.58 0.00 37.31 2.90
556 557 6.133356 TCCCTCCATGTTCTTTAAAAAGTGT 58.867 36.000 2.58 0.00 37.31 3.55
557 558 6.265422 ACTCCCTCCATGTTCTTTAAAAAGTG 59.735 38.462 2.58 0.00 37.31 3.16
558 559 6.373759 ACTCCCTCCATGTTCTTTAAAAAGT 58.626 36.000 2.58 0.00 37.31 2.66
559 560 6.901081 ACTCCCTCCATGTTCTTTAAAAAG 57.099 37.500 0.00 0.00 37.36 2.27
561 562 9.847224 GATATACTCCCTCCATGTTCTTTAAAA 57.153 33.333 0.00 0.00 0.00 1.52
562 563 8.148351 CGATATACTCCCTCCATGTTCTTTAAA 58.852 37.037 0.00 0.00 0.00 1.52
563 564 7.289317 ACGATATACTCCCTCCATGTTCTTTAA 59.711 37.037 0.00 0.00 0.00 1.52
564 565 6.781014 ACGATATACTCCCTCCATGTTCTTTA 59.219 38.462 0.00 0.00 0.00 1.85
565 566 5.602978 ACGATATACTCCCTCCATGTTCTTT 59.397 40.000 0.00 0.00 0.00 2.52
566 567 5.148502 ACGATATACTCCCTCCATGTTCTT 58.851 41.667 0.00 0.00 0.00 2.52
567 568 4.742012 ACGATATACTCCCTCCATGTTCT 58.258 43.478 0.00 0.00 0.00 3.01
568 569 4.379603 CGACGATATACTCCCTCCATGTTC 60.380 50.000 0.00 0.00 0.00 3.18
569 570 3.506455 CGACGATATACTCCCTCCATGTT 59.494 47.826 0.00 0.00 0.00 2.71
570 571 3.082548 CGACGATATACTCCCTCCATGT 58.917 50.000 0.00 0.00 0.00 3.21
571 572 2.423892 CCGACGATATACTCCCTCCATG 59.576 54.545 0.00 0.00 0.00 3.66
572 573 2.724454 CCGACGATATACTCCCTCCAT 58.276 52.381 0.00 0.00 0.00 3.41
573 574 1.885359 GCCGACGATATACTCCCTCCA 60.885 57.143 0.00 0.00 0.00 3.86
574 575 0.810016 GCCGACGATATACTCCCTCC 59.190 60.000 0.00 0.00 0.00 4.30
575 576 1.531423 TGCCGACGATATACTCCCTC 58.469 55.000 0.00 0.00 0.00 4.30
576 577 1.819288 CATGCCGACGATATACTCCCT 59.181 52.381 0.00 0.00 0.00 4.20
577 578 1.816835 TCATGCCGACGATATACTCCC 59.183 52.381 0.00 0.00 0.00 4.30
578 579 3.243336 GTTCATGCCGACGATATACTCC 58.757 50.000 0.00 0.00 0.00 3.85
579 580 2.909244 CGTTCATGCCGACGATATACTC 59.091 50.000 9.53 0.00 41.53 2.59
580 581 2.351447 CCGTTCATGCCGACGATATACT 60.351 50.000 14.78 0.00 41.53 2.12
581 582 1.983605 CCGTTCATGCCGACGATATAC 59.016 52.381 14.78 0.00 41.53 1.47
582 583 1.610038 ACCGTTCATGCCGACGATATA 59.390 47.619 14.78 0.00 41.53 0.86
583 584 0.387929 ACCGTTCATGCCGACGATAT 59.612 50.000 14.78 0.00 41.53 1.63
628 629 2.034124 ACAAGCTGCCACACATTCTTT 58.966 42.857 0.00 0.00 0.00 2.52
689 697 8.915036 CATGTAGTACTCCTACTTGTCCTTTAT 58.085 37.037 0.00 0.00 45.36 1.40
692 700 6.777213 CATGTAGTACTCCTACTTGTCCTT 57.223 41.667 0.00 0.00 45.36 3.36
713 724 4.098044 CCCACTCGTCATGTAGTTCTACAT 59.902 45.833 16.70 16.70 40.99 2.29
714 725 3.442625 CCCACTCGTCATGTAGTTCTACA 59.557 47.826 13.85 13.85 0.00 2.74
742 753 4.124238 CTGAAGTTTGTCGGAACCTTACA 58.876 43.478 0.00 0.00 0.00 2.41
745 756 3.553828 TCTGAAGTTTGTCGGAACCTT 57.446 42.857 0.00 0.00 29.74 3.50
793 804 7.557719 AGGTGTTAAATGTGATTATTAGCAGCT 59.442 33.333 0.00 0.00 40.95 4.24
816 831 5.581085 GTGCAATTTAGAGACATTACGAGGT 59.419 40.000 0.00 0.00 0.00 3.85
1099 1203 2.158475 TCAAACCATGGAGCAAGAAGGT 60.158 45.455 21.47 0.00 0.00 3.50
1108 1231 2.355756 CGCAGGTAATCAAACCATGGAG 59.644 50.000 21.47 8.04 42.40 3.86
1140 1263 3.810310 TTCAAACCAATTCACCACCAC 57.190 42.857 0.00 0.00 0.00 4.16
1145 1270 4.133078 TGGCAAATTCAAACCAATTCACC 58.867 39.130 0.00 0.00 0.00 4.02
1154 1279 6.660887 TCAGAAAACTTGGCAAATTCAAAC 57.339 33.333 17.17 2.48 0.00 2.93
1184 1324 2.084610 TGGATCACAGCAAACGAGAG 57.915 50.000 0.00 0.00 0.00 3.20
1211 1355 1.273606 TCTTCAGGTTCCTCTTCTGCG 59.726 52.381 0.00 0.00 0.00 5.18
1480 1630 2.827642 GGTGCTGATGGCTCTGGC 60.828 66.667 0.00 0.00 42.39 4.85
1639 1789 0.376852 TGAACGAAATAGGCGCATGC 59.623 50.000 10.83 7.91 41.71 4.06
1794 1957 9.737427 ACAGCACGATTGTATATAATCTATAGC 57.263 33.333 17.11 14.55 35.42 2.97
1803 1966 9.705290 AATAACATCACAGCACGATTGTATATA 57.295 29.630 0.00 0.00 0.00 0.86
1804 1967 8.607441 AATAACATCACAGCACGATTGTATAT 57.393 30.769 0.00 0.00 0.00 0.86
1868 2034 4.135153 CGTGTCCGAGCCCTGAGG 62.135 72.222 0.00 0.00 35.63 3.86
1915 2081 4.783227 AGAGTATTCCCTGGAGTAAAAGCA 59.217 41.667 0.00 0.00 0.00 3.91
1918 2084 7.989947 ATACAGAGTATTCCCTGGAGTAAAA 57.010 36.000 0.00 0.00 34.85 1.52
2013 2179 7.430992 AAGGAAAAATGTTACTTACCGAGTC 57.569 36.000 0.00 0.00 39.86 3.36
2018 2184 6.645003 CCAGCAAAGGAAAAATGTTACTTACC 59.355 38.462 0.00 0.00 0.00 2.85
2052 2218 3.208594 TGCATCTTCGATGAAATGAGGG 58.791 45.455 4.98 0.00 0.00 4.30
2080 2246 7.016153 ACCAACTCCTTGTTCAGAATACATA 57.984 36.000 0.00 0.00 36.63 2.29
2171 2355 9.507329 AAAGCTTAGAAACATGAGTAGAAATCA 57.493 29.630 0.00 0.00 0.00 2.57
2266 2452 3.642848 TCCCAAGAAACTACGTTACTGGT 59.357 43.478 0.00 0.00 0.00 4.00
2457 2652 9.998106 GCTGATATATCCCTTCTTTTGTACTAA 57.002 33.333 10.25 0.00 0.00 2.24
2458 2653 9.381038 AGCTGATATATCCCTTCTTTTGTACTA 57.619 33.333 10.25 0.00 0.00 1.82
2459 2654 8.153550 CAGCTGATATATCCCTTCTTTTGTACT 58.846 37.037 8.42 0.00 0.00 2.73
2460 2655 8.150945 TCAGCTGATATATCCCTTCTTTTGTAC 58.849 37.037 13.74 0.00 0.00 2.90
2473 2668 4.769488 TGAGACCTGGTCAGCTGATATATC 59.231 45.833 27.48 13.78 34.60 1.63
2640 2902 2.645838 AGTAGGTACGCGAGGGATAA 57.354 50.000 15.93 0.00 0.00 1.75
2692 2963 5.665459 ACCTTGAATGCAGTCTACATCTAC 58.335 41.667 16.05 0.00 0.00 2.59
3229 3515 0.107654 AGGTGAAGAATAGTGCGCCC 60.108 55.000 4.18 0.00 0.00 6.13
3283 3569 5.241949 TGTGAACTTAAACAAGGTTGTGTGT 59.758 36.000 0.00 0.00 41.31 3.72
3284 3570 5.704888 TGTGAACTTAAACAAGGTTGTGTG 58.295 37.500 0.00 0.00 41.31 3.82
3495 3796 3.536956 TTACCTATCACGGAGCCAAAG 57.463 47.619 0.00 0.00 0.00 2.77
3564 3869 8.887036 ACAAAATCAACCCATTTTAAGAAGAC 57.113 30.769 0.00 0.00 34.77 3.01
3568 3873 8.364142 CCTGTACAAAATCAACCCATTTTAAGA 58.636 33.333 0.00 0.00 34.77 2.10
3579 3885 3.250040 ACGCAGACCTGTACAAAATCAAC 59.750 43.478 0.00 0.00 0.00 3.18
3670 3976 3.366997 GCTGCGAAAAATGCGAGC 58.633 55.556 0.00 0.00 34.24 5.03
3953 4611 5.784578 ACCCTCTTTGTATGGAAAAACAC 57.215 39.130 0.00 0.00 0.00 3.32
4218 4880 6.600882 AAGCATTTCAAGGAGATCAACAAT 57.399 33.333 0.00 0.00 0.00 2.71
4432 5122 7.159322 TCAACTACCTCTCTCTGAACATAAC 57.841 40.000 0.00 0.00 0.00 1.89
4876 5586 7.520451 TTATAGTGTGCACGGAGAGTTATAT 57.480 36.000 13.13 2.76 36.20 0.86
4908 5618 9.143631 AGCTGTATTTCAAAAAGCAATAACATC 57.856 29.630 5.82 0.00 36.32 3.06
4999 5709 3.073274 ACCTTCAGTAATTCAGCACCC 57.927 47.619 0.00 0.00 0.00 4.61
5148 5869 1.946768 GCATGGCGCTGAATAGGTTAA 59.053 47.619 7.64 0.00 37.77 2.01
5149 5870 1.134250 TGCATGGCGCTGAATAGGTTA 60.134 47.619 7.64 0.00 43.06 2.85
5150 5871 0.394216 TGCATGGCGCTGAATAGGTT 60.394 50.000 7.64 0.00 43.06 3.50
5151 5872 0.816825 CTGCATGGCGCTGAATAGGT 60.817 55.000 7.64 0.00 41.88 3.08
5152 5873 1.947013 CTGCATGGCGCTGAATAGG 59.053 57.895 7.64 0.00 41.88 2.57
5153 5874 1.281960 GCTGCATGGCGCTGAATAG 59.718 57.895 7.64 2.08 41.88 1.73
5154 5875 1.031029 TTGCTGCATGGCGCTGAATA 61.031 50.000 7.64 0.00 41.88 1.75
5155 5876 1.672854 ATTGCTGCATGGCGCTGAAT 61.673 50.000 7.64 0.00 41.88 2.57
5156 5877 1.031029 TATTGCTGCATGGCGCTGAA 61.031 50.000 7.64 0.00 41.88 3.02
5157 5878 1.441732 CTATTGCTGCATGGCGCTGA 61.442 55.000 7.64 0.00 41.88 4.26
5158 5879 1.008881 CTATTGCTGCATGGCGCTG 60.009 57.895 7.64 0.00 43.06 5.18
5159 5880 1.033746 AACTATTGCTGCATGGCGCT 61.034 50.000 7.64 0.00 43.06 5.92
5160 5881 0.593263 GAACTATTGCTGCATGGCGC 60.593 55.000 1.84 0.00 42.89 6.53
5161 5882 0.734309 TGAACTATTGCTGCATGGCG 59.266 50.000 1.84 0.00 34.52 5.69
5162 5883 2.094597 TGTTGAACTATTGCTGCATGGC 60.095 45.455 1.84 0.00 0.00 4.40
5163 5884 3.853831 TGTTGAACTATTGCTGCATGG 57.146 42.857 1.84 0.00 0.00 3.66
5164 5885 6.731164 TCATATGTTGAACTATTGCTGCATG 58.269 36.000 1.84 0.00 0.00 4.06
5165 5886 6.947644 TCATATGTTGAACTATTGCTGCAT 57.052 33.333 1.84 0.00 0.00 3.96
5166 5887 6.756299 TTCATATGTTGAACTATTGCTGCA 57.244 33.333 0.00 0.00 39.44 4.41
5167 5888 7.306399 GCATTTCATATGTTGAACTATTGCTGC 60.306 37.037 1.90 0.00 43.99 5.25
5168 5889 7.703197 TGCATTTCATATGTTGAACTATTGCTG 59.297 33.333 1.90 0.00 43.99 4.41
5169 5890 7.774134 TGCATTTCATATGTTGAACTATTGCT 58.226 30.769 1.90 0.00 43.99 3.91
5170 5891 7.990541 TGCATTTCATATGTTGAACTATTGC 57.009 32.000 1.90 4.66 43.99 3.56
5261 5982 0.551377 TCCCCACTTGCTTATCCCCA 60.551 55.000 0.00 0.00 0.00 4.96
5598 6327 1.079875 CCATTGAATGCGCTGCCAAC 61.080 55.000 9.73 0.00 0.00 3.77
5741 6945 9.765795 GTGCTTAATAAAGTAGGATACAGTCAT 57.234 33.333 0.00 0.00 46.26 3.06
5989 7318 1.342819 TGCTAAAACGGCCTTTTGCAT 59.657 42.857 18.15 3.18 43.89 3.96
6319 7656 7.701501 GTGTTTTCCAAACATTGATTGCATTTT 59.298 29.630 5.40 0.00 32.23 1.82
6402 7739 6.259829 AGTTTGGATTTTGGAAATTTGTTCGG 59.740 34.615 0.00 0.00 0.00 4.30
6442 7779 7.096551 AGTTTGGGGATTTCATATTTTGTTCG 58.903 34.615 0.00 0.00 0.00 3.95
6569 7921 9.114952 GGGAATTCAAATCTTGTTTGGTTTTAA 57.885 29.630 7.93 0.00 0.00 1.52
6570 7922 8.267894 TGGGAATTCAAATCTTGTTTGGTTTTA 58.732 29.630 7.93 0.00 0.00 1.52
7047 8439 9.768662 ACTGCAAAATTCTAAAATGTTCTGAAT 57.231 25.926 0.00 0.00 0.00 2.57
7048 8440 9.248291 GACTGCAAAATTCTAAAATGTTCTGAA 57.752 29.630 0.00 0.00 0.00 3.02
7049 8441 8.412456 TGACTGCAAAATTCTAAAATGTTCTGA 58.588 29.630 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.