Multiple sequence alignment - TraesCS1D01G342600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G342600 chr1D 100.000 3730 0 0 441 4170 432206058 432202329 0.000000e+00 6889.0
1 TraesCS1D01G342600 chr1D 89.320 515 43 9 1572 2080 15184471 15184979 1.640000e-178 636.0
2 TraesCS1D01G342600 chr1D 100.000 189 0 0 1 189 432206498 432206310 2.390000e-92 350.0
3 TraesCS1D01G342600 chr1D 100.000 31 0 0 1 31 432229563 432229533 1.620000e-04 58.4
4 TraesCS1D01G342600 chr1B 92.375 2387 122 20 1173 3527 583688248 583685890 0.000000e+00 3345.0
5 TraesCS1D01G342600 chr1B 90.078 514 41 6 1572 2080 6412926 6413434 0.000000e+00 658.0
6 TraesCS1D01G342600 chr1B 90.039 512 43 6 1572 2080 23667655 23668161 0.000000e+00 656.0
7 TraesCS1D01G342600 chr1B 81.090 587 41 28 441 1007 583689125 583688589 5.020000e-109 405.0
8 TraesCS1D01G342600 chr1B 89.103 156 11 4 3 152 583689418 583689263 5.500000e-44 189.0
9 TraesCS1D01G342600 chr1B 90.179 112 9 2 3548 3659 583685503 583685394 1.210000e-30 145.0
10 TraesCS1D01G342600 chr1A 90.349 2321 128 32 1238 3527 530730942 530728687 0.000000e+00 2957.0
11 TraesCS1D01G342600 chr1A 84.441 752 26 23 441 1151 530732062 530731361 0.000000e+00 656.0
12 TraesCS1D01G342600 chr1A 90.234 471 36 6 1479 1947 504761976 504762438 1.280000e-169 606.0
13 TraesCS1D01G342600 chr1A 90.446 157 11 3 1 153 530732363 530732207 1.970000e-48 204.0
14 TraesCS1D01G342600 chr5D 92.531 723 17 5 1128 1843 80203945 80203253 0.000000e+00 1002.0
15 TraesCS1D01G342600 chr5D 92.254 723 21 7 1128 1843 296177104 296177798 0.000000e+00 992.0
16 TraesCS1D01G342600 chr5D 89.073 723 17 6 1128 1843 378331888 378331221 0.000000e+00 841.0
17 TraesCS1D01G342600 chr5D 93.939 561 24 3 2489 3043 296177967 296178523 0.000000e+00 839.0
18 TraesCS1D01G342600 chr5D 93.761 561 25 3 2489 3043 378331052 378330496 0.000000e+00 833.0
19 TraesCS1D01G342600 chr5D 93.761 561 25 3 2489 3043 559439998 559440554 0.000000e+00 833.0
20 TraesCS1D01G342600 chr5D 93.135 437 20 3 2489 2919 80203084 80202652 2.120000e-177 632.0
21 TraesCS1D01G342600 chr5D 97.143 350 4 3 1128 1471 559439150 559439499 1.670000e-163 586.0
22 TraesCS1D01G342600 chr5D 92.606 284 15 3 1056 1339 394992075 394992352 1.810000e-108 403.0
23 TraesCS1D01G342600 chr5D 92.169 166 7 1 2271 2430 296177798 296177963 3.240000e-56 230.0
24 TraesCS1D01G342600 chr5D 91.566 166 8 1 2271 2430 80203253 80203088 1.510000e-54 224.0
25 TraesCS1D01G342600 chr5D 91.566 166 8 1 2271 2430 378331221 378331056 1.510000e-54 224.0
26 TraesCS1D01G342600 chr5D 91.566 166 8 1 2271 2430 559439829 559439994 1.510000e-54 224.0
27 TraesCS1D01G342600 chr5D 94.488 127 6 1 2918 3043 80202460 80202334 1.180000e-45 195.0
28 TraesCS1D01G342600 chr5D 91.228 114 6 4 3548 3659 80201875 80201764 7.220000e-33 152.0
29 TraesCS1D01G342600 chr5D 90.598 117 7 4 3545 3659 559441010 559441124 7.220000e-33 152.0
30 TraesCS1D01G342600 chr5D 89.744 117 8 4 3545 3659 296178978 296179092 3.360000e-31 147.0
31 TraesCS1D01G342600 chr5D 90.351 114 7 4 3548 3659 378330039 378329928 3.360000e-31 147.0
32 TraesCS1D01G342600 chr5D 79.592 196 18 12 3994 4170 80201779 80201587 2.040000e-23 121.0
33 TraesCS1D01G342600 chr5D 79.592 196 18 12 3994 4170 296179077 296179269 2.040000e-23 121.0
34 TraesCS1D01G342600 chr5D 79.592 196 18 12 3994 4170 559441109 559441301 2.040000e-23 121.0
35 TraesCS1D01G342600 chr5D 84.127 126 12 3 3410 3527 80202328 80202203 9.470000e-22 115.0
36 TraesCS1D01G342600 chr5D 84.127 126 12 3 3410 3527 296178529 296178654 9.470000e-22 115.0
37 TraesCS1D01G342600 chr5D 79.082 196 19 12 3994 4170 378329943 378329751 9.470000e-22 115.0
38 TraesCS1D01G342600 chr5D 84.127 126 12 3 3410 3527 378330490 378330365 9.470000e-22 115.0
39 TraesCS1D01G342600 chr5D 84.127 126 12 3 3410 3527 559440560 559440685 9.470000e-22 115.0
40 TraesCS1D01G342600 chr5A 90.411 511 42 4 1572 2080 439770074 439769569 0.000000e+00 665.0
41 TraesCS1D01G342600 chr3A 89.062 512 48 6 1572 2080 227067869 227068375 2.740000e-176 628.0
42 TraesCS1D01G342600 chr3A 93.519 108 6 1 1974 2080 726476795 726476902 4.320000e-35 159.0
43 TraesCS1D01G342600 chr2B 89.809 471 37 7 1479 1947 551368666 551368205 9.980000e-166 593.0
44 TraesCS1D01G342600 chr5B 92.793 222 15 1 1858 2078 564768560 564768339 1.870000e-83 320.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G342600 chr1D 432202329 432206498 4169 True 3619.500000 6889 100.000000 1 4170 2 chr1D.!!$R2 4169
1 TraesCS1D01G342600 chr1D 15184471 15184979 508 False 636.000000 636 89.320000 1572 2080 1 chr1D.!!$F1 508
2 TraesCS1D01G342600 chr1B 583685394 583689418 4024 True 1021.000000 3345 88.186750 3 3659 4 chr1B.!!$R1 3656
3 TraesCS1D01G342600 chr1B 6412926 6413434 508 False 658.000000 658 90.078000 1572 2080 1 chr1B.!!$F1 508
4 TraesCS1D01G342600 chr1B 23667655 23668161 506 False 656.000000 656 90.039000 1572 2080 1 chr1B.!!$F2 508
5 TraesCS1D01G342600 chr1A 530728687 530732363 3676 True 1272.333333 2957 88.412000 1 3527 3 chr1A.!!$R1 3526
6 TraesCS1D01G342600 chr5D 296177104 296179269 2165 False 407.333333 992 88.637500 1128 4170 6 chr5D.!!$F2 3042
7 TraesCS1D01G342600 chr5D 378329751 378331888 2137 True 379.166667 841 87.993333 1128 4170 6 chr5D.!!$R2 3042
8 TraesCS1D01G342600 chr5D 80201587 80203945 2358 True 348.714286 1002 89.523857 1128 4170 7 chr5D.!!$R1 3042
9 TraesCS1D01G342600 chr5D 559439150 559441301 2151 False 338.500000 833 89.464500 1128 4170 6 chr5D.!!$F3 3042
10 TraesCS1D01G342600 chr5A 439769569 439770074 505 True 665.000000 665 90.411000 1572 2080 1 chr5A.!!$R1 508
11 TraesCS1D01G342600 chr3A 227067869 227068375 506 False 628.000000 628 89.062000 1572 2080 1 chr3A.!!$F1 508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
892 936 0.034960 TAAAAGCATACCGCCAGCCA 60.035 50.0 0.0 0.0 44.04 4.75 F
1858 2310 0.962489 CCGGACTCTATGGTGCTAGG 59.038 60.0 0.0 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1917 2369 0.180171 AAGGCACCCAACAAAAAGCC 59.820 50.0 0.0 0.0 42.31 4.35 R
3665 4733 0.103208 ATCCAGCGTAAGGAAGCTCG 59.897 55.0 0.0 0.0 42.52 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.446907 CTGACTGCAGAACATCCACC 58.553 55.000 23.35 0.00 45.17 4.61
24 25 0.764271 TGACTGCAGAACATCCACCA 59.236 50.000 23.35 1.02 0.00 4.17
25 26 1.160137 GACTGCAGAACATCCACCAC 58.840 55.000 23.35 0.00 0.00 4.16
50 53 3.455910 TCCCATCCTGGAAGACTATGTTG 59.544 47.826 0.00 0.00 40.96 3.33
51 54 3.200825 CCCATCCTGGAAGACTATGTTGT 59.799 47.826 0.00 0.00 40.96 3.32
72 79 2.328099 CGCAGTTGAAGGCCAGGAC 61.328 63.158 5.01 0.00 0.00 3.85
143 150 2.491298 CTCTGCAGACTCTAGTGCTTGA 59.509 50.000 13.74 3.08 40.54 3.02
153 160 8.725148 CAGACTCTAGTGCTTGATTTAAAATGT 58.275 33.333 0.00 0.00 0.00 2.71
154 161 8.725148 AGACTCTAGTGCTTGATTTAAAATGTG 58.275 33.333 0.00 0.00 0.00 3.21
155 162 7.308435 ACTCTAGTGCTTGATTTAAAATGTGC 58.692 34.615 0.00 0.00 0.00 4.57
156 163 7.040478 ACTCTAGTGCTTGATTTAAAATGTGCA 60.040 33.333 0.00 0.00 0.00 4.57
157 164 7.656412 TCTAGTGCTTGATTTAAAATGTGCAA 58.344 30.769 9.68 0.00 0.00 4.08
158 165 6.529463 AGTGCTTGATTTAAAATGTGCAAC 57.471 33.333 9.68 6.22 37.35 4.17
160 167 5.236047 GTGCTTGATTTAAAATGTGCAACCA 59.764 36.000 9.68 0.00 34.36 3.67
161 168 5.819379 TGCTTGATTTAAAATGTGCAACCAA 59.181 32.000 0.00 0.00 34.36 3.67
162 169 6.317140 TGCTTGATTTAAAATGTGCAACCAAA 59.683 30.769 0.00 0.00 34.36 3.28
164 171 7.467131 GCTTGATTTAAAATGTGCAACCAAACT 60.467 33.333 0.00 0.00 34.36 2.66
166 173 8.586570 TGATTTAAAATGTGCAACCAAACTAG 57.413 30.769 0.00 0.00 34.36 2.57
167 174 7.655328 TGATTTAAAATGTGCAACCAAACTAGG 59.345 33.333 0.00 0.00 34.36 3.02
168 175 3.385193 AAATGTGCAACCAAACTAGGC 57.615 42.857 0.00 0.00 34.36 3.93
546 574 3.973206 TCCATGGTAATATGGTAGCCG 57.027 47.619 12.58 0.00 46.23 5.52
554 582 2.795175 ATATGGTAGCCGTGTCTTCG 57.205 50.000 0.00 0.00 0.00 3.79
563 591 0.666274 CCGTGTCTTCGCAAGCACTA 60.666 55.000 14.61 0.00 35.10 2.74
568 596 0.966179 TCTTCGCAAGCACTAGTGGA 59.034 50.000 23.95 9.63 37.18 4.02
573 601 1.929836 CGCAAGCACTAGTGGAATCTC 59.070 52.381 23.95 6.42 0.00 2.75
574 602 2.284190 GCAAGCACTAGTGGAATCTCC 58.716 52.381 23.95 5.70 36.96 3.71
575 603 2.355108 GCAAGCACTAGTGGAATCTCCA 60.355 50.000 23.95 0.00 45.98 3.86
583 611 3.087343 TGGAATCTCCACAGCTCCA 57.913 52.632 0.00 0.00 42.67 3.86
584 612 0.907486 TGGAATCTCCACAGCTCCAG 59.093 55.000 0.00 0.00 42.67 3.86
585 613 0.908198 GGAATCTCCACAGCTCCAGT 59.092 55.000 0.00 0.00 36.28 4.00
586 614 1.134551 GGAATCTCCACAGCTCCAGTC 60.135 57.143 0.00 0.00 36.28 3.51
587 615 1.552337 GAATCTCCACAGCTCCAGTCA 59.448 52.381 0.00 0.00 0.00 3.41
588 616 0.901124 ATCTCCACAGCTCCAGTCAC 59.099 55.000 0.00 0.00 0.00 3.67
589 617 0.469892 TCTCCACAGCTCCAGTCACA 60.470 55.000 0.00 0.00 0.00 3.58
590 618 0.037512 CTCCACAGCTCCAGTCACAG 60.038 60.000 0.00 0.00 0.00 3.66
591 619 1.670406 CCACAGCTCCAGTCACAGC 60.670 63.158 0.00 0.00 35.73 4.40
653 681 7.009568 CAATCTCTGCTCCAAGTATGTAAAC 57.990 40.000 0.00 0.00 0.00 2.01
654 682 6.552445 ATCTCTGCTCCAAGTATGTAAACT 57.448 37.500 0.00 0.00 0.00 2.66
659 690 6.206634 TCTGCTCCAAGTATGTAAACTTTTGG 59.793 38.462 0.00 0.00 37.61 3.28
666 697 8.630037 CCAAGTATGTAAACTTTTGGTCTTCTT 58.370 33.333 0.00 0.00 37.61 2.52
689 720 2.347697 TCCTTCGTCGTGAACATCAG 57.652 50.000 0.00 0.00 31.87 2.90
754 798 8.409358 AAAATCCTTTTGTATGAGTAACAGCT 57.591 30.769 0.00 0.00 0.00 4.24
755 799 9.515226 AAAATCCTTTTGTATGAGTAACAGCTA 57.485 29.630 0.00 0.00 0.00 3.32
756 800 9.515226 AAATCCTTTTGTATGAGTAACAGCTAA 57.485 29.630 0.00 0.00 0.00 3.09
757 801 9.515226 AATCCTTTTGTATGAGTAACAGCTAAA 57.485 29.630 0.00 0.00 0.00 1.85
758 802 8.911918 TCCTTTTGTATGAGTAACAGCTAAAA 57.088 30.769 0.00 0.00 0.00 1.52
759 803 9.344772 TCCTTTTGTATGAGTAACAGCTAAAAA 57.655 29.630 0.00 0.00 0.00 1.94
889 933 2.034558 CCCAATAAAAGCATACCGCCAG 59.965 50.000 0.00 0.00 44.04 4.85
891 935 1.318576 ATAAAAGCATACCGCCAGCC 58.681 50.000 0.00 0.00 44.04 4.85
892 936 0.034960 TAAAAGCATACCGCCAGCCA 60.035 50.000 0.00 0.00 44.04 4.75
893 937 1.595093 AAAAGCATACCGCCAGCCAC 61.595 55.000 0.00 0.00 44.04 5.01
894 938 3.995506 AAGCATACCGCCAGCCACC 62.996 63.158 0.00 0.00 44.04 4.61
896 940 4.108299 CATACCGCCAGCCACCCA 62.108 66.667 0.00 0.00 0.00 4.51
897 941 4.109675 ATACCGCCAGCCACCCAC 62.110 66.667 0.00 0.00 0.00 4.61
1089 1165 2.125512 CAGTCGCCCTTCTTCCGG 60.126 66.667 0.00 0.00 0.00 5.14
1676 2113 2.308690 AGTAGTATCTTGGAGACCGCC 58.691 52.381 0.00 0.00 0.00 6.13
1678 2115 1.591863 GTATCTTGGAGACCGCCGC 60.592 63.158 0.00 0.00 0.00 6.53
1858 2310 0.962489 CCGGACTCTATGGTGCTAGG 59.038 60.000 0.00 0.00 0.00 3.02
1917 2369 1.461127 GAAAGCAGTAGCCGTCACTTG 59.539 52.381 0.00 0.00 43.56 3.16
2100 2557 8.694171 TGGATCCACATATTATACCAGGTAAT 57.306 34.615 11.44 0.00 0.00 1.89
2101 2558 8.768397 TGGATCCACATATTATACCAGGTAATC 58.232 37.037 11.44 0.00 0.00 1.75
2103 2560 9.601217 GATCCACATATTATACCAGGTAATCAC 57.399 37.037 2.53 0.00 0.00 3.06
2127 2584 1.527034 TCAGTTACCGTCGCTACTGT 58.473 50.000 14.90 0.00 39.16 3.55
2133 2590 4.216257 AGTTACCGTCGCTACTGTTTTCTA 59.784 41.667 0.00 0.00 0.00 2.10
2136 2593 4.563061 ACCGTCGCTACTGTTTTCTATTT 58.437 39.130 0.00 0.00 0.00 1.40
2137 2594 5.713025 ACCGTCGCTACTGTTTTCTATTTA 58.287 37.500 0.00 0.00 0.00 1.40
2144 2601 9.059260 TCGCTACTGTTTTCTATTTAACCTTTT 57.941 29.630 0.00 0.00 0.00 2.27
2192 2649 7.655328 TCCCAACAGTTGTATTAATTTGCTTTG 59.345 33.333 12.42 0.00 0.00 2.77
2193 2650 7.440856 CCCAACAGTTGTATTAATTTGCTTTGT 59.559 33.333 12.42 0.00 0.00 2.83
2194 2651 8.825745 CCAACAGTTGTATTAATTTGCTTTGTT 58.174 29.630 12.42 0.00 0.00 2.83
2195 2652 9.635632 CAACAGTTGTATTAATTTGCTTTGTTG 57.364 29.630 4.99 12.63 35.97 3.33
2196 2653 7.850501 ACAGTTGTATTAATTTGCTTTGTTGC 58.149 30.769 0.00 0.00 0.00 4.17
2197 2654 7.710475 ACAGTTGTATTAATTTGCTTTGTTGCT 59.290 29.630 0.00 0.00 0.00 3.91
2198 2655 8.550376 CAGTTGTATTAATTTGCTTTGTTGCTT 58.450 29.630 0.00 0.00 0.00 3.91
2199 2656 9.757227 AGTTGTATTAATTTGCTTTGTTGCTTA 57.243 25.926 0.00 0.00 0.00 3.09
2216 2687 7.335627 TGTTGCTTATAGGTAGTTGCTAATGT 58.664 34.615 0.00 0.00 0.00 2.71
2238 2709 4.921515 GTGCTGTGACTCGACATAAACTTA 59.078 41.667 0.00 0.00 0.00 2.24
2303 2775 7.013083 GGCACCATTCATCATCTTATATGATCC 59.987 40.741 0.00 0.00 36.69 3.36
2473 2951 0.238289 CCACCGTGCACATCAAGTTC 59.762 55.000 18.64 0.00 0.00 3.01
2570 3056 6.461788 GGTTTTGGCCTGTTGAGTATGTTTTA 60.462 38.462 3.32 0.00 0.00 1.52
2571 3057 6.716934 TTTGGCCTGTTGAGTATGTTTTAA 57.283 33.333 3.32 0.00 0.00 1.52
2572 3058 6.716934 TTGGCCTGTTGAGTATGTTTTAAA 57.283 33.333 3.32 0.00 0.00 1.52
2575 3061 6.719370 TGGCCTGTTGAGTATGTTTTAAATCT 59.281 34.615 3.32 0.00 0.00 2.40
2578 3064 8.515414 GCCTGTTGAGTATGTTTTAAATCTTCT 58.485 33.333 0.00 0.00 0.00 2.85
2717 3209 8.747538 AGAACCTAGCTCTTTTCTTAACAAAA 57.252 30.769 0.00 0.00 0.00 2.44
2721 3213 8.622157 ACCTAGCTCTTTTCTTAACAAAAGTTC 58.378 33.333 13.52 8.21 42.00 3.01
2742 3234 0.975556 TCTCAGTTCCGCTATGCCCA 60.976 55.000 0.00 0.00 0.00 5.36
2771 3263 8.501580 CGTCACATGATAGATTTCTGCATTATT 58.498 33.333 0.00 0.00 0.00 1.40
2776 3268 8.573885 CATGATAGATTTCTGCATTATTGGTGT 58.426 33.333 0.00 0.00 0.00 4.16
2780 3272 5.948162 AGATTTCTGCATTATTGGTGTGACT 59.052 36.000 0.00 0.00 0.00 3.41
2953 3639 2.289945 GGATGATAGGCTCGCTGGAATT 60.290 50.000 0.00 0.00 0.00 2.17
2977 3663 1.280133 CAAGGAGGCTTCATGGTCTCA 59.720 52.381 6.02 0.00 39.47 3.27
3201 3887 5.221843 GCCTGTGGACCAATGATATACCTTA 60.222 44.000 0.00 0.00 0.00 2.69
3202 3888 6.467677 CCTGTGGACCAATGATATACCTTAG 58.532 44.000 0.00 0.00 0.00 2.18
3242 3928 4.252878 TGTTATGTGATGAGTGTTCGCAT 58.747 39.130 5.23 5.23 44.28 4.73
3321 4007 2.685897 CTCGAGAGAATCCGGAGAAGTT 59.314 50.000 11.34 0.00 41.32 2.66
3369 4060 6.963242 GTGATGTAACAGTTATGAATGTGCAG 59.037 38.462 0.00 0.00 0.00 4.41
3413 4105 1.722636 GCTAAGATGTGGGCAGCTGC 61.723 60.000 30.88 30.88 40.95 5.25
3427 4119 2.855953 GCAGCTGCTGTAACTTTGTGTG 60.856 50.000 31.33 2.03 38.21 3.82
3437 4129 0.548989 ACTTTGTGTGCTGGTGGGTA 59.451 50.000 0.00 0.00 0.00 3.69
3440 4132 1.425694 TTGTGTGCTGGTGGGTACTA 58.574 50.000 0.00 0.00 0.00 1.82
3447 4139 2.434336 TGCTGGTGGGTACTATCATGAC 59.566 50.000 0.00 0.00 0.00 3.06
3449 4141 3.309296 CTGGTGGGTACTATCATGACCT 58.691 50.000 0.00 0.00 33.48 3.85
3452 4144 6.222227 TGGTGGGTACTATCATGACCTATA 57.778 41.667 0.00 0.00 33.48 1.31
3453 4145 6.014647 TGGTGGGTACTATCATGACCTATAC 58.985 44.000 0.00 0.00 33.48 1.47
3459 4159 5.646577 ACTATCATGACCTATACGAAGGC 57.353 43.478 0.00 0.00 40.62 4.35
3464 4164 3.795623 TGACCTATACGAAGGCTGAAC 57.204 47.619 0.00 0.00 40.62 3.18
3512 4212 5.006153 TGTCCGTTACAATCTACATGAGG 57.994 43.478 0.00 0.00 34.29 3.86
3555 4623 7.642194 TGACAACAATTAGCTTAACAGAAAACG 59.358 33.333 0.00 0.00 0.00 3.60
3581 4649 8.776470 GGCATTTTTCTTCTGATTTGATTTGAA 58.224 29.630 0.00 0.00 0.00 2.69
3588 4656 9.748708 TTCTTCTGATTTGATTTGAAATCGTTT 57.251 25.926 12.72 0.44 42.82 3.60
3599 4667 8.739039 TGATTTGAAATCGTTTGTATTGGATCT 58.261 29.630 12.72 0.00 0.00 2.75
3602 4670 9.443323 TTTGAAATCGTTTGTATTGGATCTAGA 57.557 29.630 0.00 0.00 0.00 2.43
3606 4674 5.348986 TCGTTTGTATTGGATCTAGAGTGC 58.651 41.667 0.00 0.00 0.00 4.40
3610 4678 7.265673 GTTTGTATTGGATCTAGAGTGCAGTA 58.734 38.462 0.00 0.00 0.00 2.74
3647 4715 6.925610 TCTAATTTTCAATCAGGGTCATCG 57.074 37.500 0.00 0.00 0.00 3.84
3648 4716 4.989279 AATTTTCAATCAGGGTCATCGG 57.011 40.909 0.00 0.00 0.00 4.18
3649 4717 1.750193 TTTCAATCAGGGTCATCGGC 58.250 50.000 0.00 0.00 0.00 5.54
3650 4718 0.461870 TTCAATCAGGGTCATCGGCG 60.462 55.000 0.00 0.00 0.00 6.46
3651 4719 1.153369 CAATCAGGGTCATCGGCGT 60.153 57.895 6.85 0.00 0.00 5.68
3652 4720 1.153369 AATCAGGGTCATCGGCGTG 60.153 57.895 6.85 4.88 0.00 5.34
3653 4721 3.740128 ATCAGGGTCATCGGCGTGC 62.740 63.158 6.85 1.62 0.00 5.34
3654 4722 4.758251 CAGGGTCATCGGCGTGCA 62.758 66.667 6.85 0.00 0.00 4.57
3655 4723 3.785859 AGGGTCATCGGCGTGCAT 61.786 61.111 6.85 0.00 0.00 3.96
3656 4724 2.824041 GGGTCATCGGCGTGCATT 60.824 61.111 6.85 0.00 0.00 3.56
3657 4725 2.709475 GGTCATCGGCGTGCATTC 59.291 61.111 6.85 0.00 0.00 2.67
3658 4726 2.709475 GTCATCGGCGTGCATTCC 59.291 61.111 6.85 0.00 0.00 3.01
3659 4727 1.815421 GTCATCGGCGTGCATTCCT 60.815 57.895 6.85 0.00 0.00 3.36
3660 4728 1.815003 TCATCGGCGTGCATTCCTG 60.815 57.895 6.85 0.00 0.00 3.86
3661 4729 2.514592 ATCGGCGTGCATTCCTGG 60.515 61.111 6.85 0.00 0.00 4.45
3662 4730 3.030168 ATCGGCGTGCATTCCTGGA 62.030 57.895 6.85 0.00 0.00 3.86
3663 4731 2.930385 ATCGGCGTGCATTCCTGGAG 62.930 60.000 6.85 0.00 0.00 3.86
3664 4732 2.268920 GGCGTGCATTCCTGGAGA 59.731 61.111 0.00 0.00 0.00 3.71
3665 4733 2.109126 GGCGTGCATTCCTGGAGAC 61.109 63.158 0.00 0.00 0.00 3.36
3666 4734 2.456119 GCGTGCATTCCTGGAGACG 61.456 63.158 12.51 12.51 0.00 4.18
3667 4735 1.215382 CGTGCATTCCTGGAGACGA 59.785 57.895 11.80 0.00 0.00 4.20
3668 4736 0.803768 CGTGCATTCCTGGAGACGAG 60.804 60.000 11.80 0.00 0.00 4.18
3669 4737 1.086634 GTGCATTCCTGGAGACGAGC 61.087 60.000 0.00 0.00 0.00 5.03
3670 4738 1.260538 TGCATTCCTGGAGACGAGCT 61.261 55.000 0.00 0.00 0.00 4.09
3671 4739 0.107945 GCATTCCTGGAGACGAGCTT 60.108 55.000 0.00 0.00 0.00 3.74
3672 4740 1.933247 CATTCCTGGAGACGAGCTTC 58.067 55.000 0.00 0.00 0.00 3.86
3673 4741 0.827368 ATTCCTGGAGACGAGCTTCC 59.173 55.000 0.00 0.00 0.00 3.46
3674 4742 0.251832 TTCCTGGAGACGAGCTTCCT 60.252 55.000 3.88 0.00 0.00 3.36
3675 4743 0.251832 TCCTGGAGACGAGCTTCCTT 60.252 55.000 3.88 0.00 0.00 3.36
3676 4744 1.005569 TCCTGGAGACGAGCTTCCTTA 59.994 52.381 3.88 0.00 0.00 2.69
3677 4745 1.135333 CCTGGAGACGAGCTTCCTTAC 59.865 57.143 3.88 0.00 0.00 2.34
3678 4746 0.809385 TGGAGACGAGCTTCCTTACG 59.191 55.000 3.88 0.00 0.00 3.18
3679 4747 0.525882 GGAGACGAGCTTCCTTACGC 60.526 60.000 0.00 0.00 0.00 4.42
3680 4748 0.452585 GAGACGAGCTTCCTTACGCT 59.547 55.000 0.00 0.00 39.61 5.07
3681 4749 0.171455 AGACGAGCTTCCTTACGCTG 59.829 55.000 0.00 0.00 36.45 5.18
3682 4750 0.802607 GACGAGCTTCCTTACGCTGG 60.803 60.000 0.00 0.00 36.45 4.85
3683 4751 1.248785 ACGAGCTTCCTTACGCTGGA 61.249 55.000 0.00 0.00 36.45 3.86
3684 4752 0.103208 CGAGCTTCCTTACGCTGGAT 59.897 55.000 0.00 0.00 36.45 3.41
3685 4753 1.576356 GAGCTTCCTTACGCTGGATG 58.424 55.000 0.00 0.00 36.45 3.51
3686 4754 2.017752 GCTTCCTTACGCTGGATGC 58.982 57.895 11.81 11.81 43.89 3.91
3687 4755 3.458872 CTTCCTTACGCTGGATGCA 57.541 52.632 0.00 0.00 43.06 3.96
3688 4756 1.959042 CTTCCTTACGCTGGATGCAT 58.041 50.000 0.00 0.00 43.06 3.96
3689 4757 2.292267 CTTCCTTACGCTGGATGCATT 58.708 47.619 0.00 0.00 43.06 3.56
3690 4758 1.953559 TCCTTACGCTGGATGCATTC 58.046 50.000 0.00 0.00 43.06 2.67
3691 4759 1.209261 TCCTTACGCTGGATGCATTCA 59.791 47.619 7.63 7.63 43.06 2.57
3692 4760 2.016318 CCTTACGCTGGATGCATTCAA 58.984 47.619 9.47 0.00 43.06 2.69
3693 4761 2.032550 CCTTACGCTGGATGCATTCAAG 59.967 50.000 9.47 8.73 43.06 3.02
3694 4762 2.689553 TACGCTGGATGCATTCAAGA 57.310 45.000 9.47 0.00 43.06 3.02
3695 4763 1.089920 ACGCTGGATGCATTCAAGAC 58.910 50.000 9.47 0.74 43.06 3.01
3696 4764 1.089112 CGCTGGATGCATTCAAGACA 58.911 50.000 9.47 0.00 43.06 3.41
3697 4765 1.469703 CGCTGGATGCATTCAAGACAA 59.530 47.619 9.47 0.00 43.06 3.18
3698 4766 2.098607 CGCTGGATGCATTCAAGACAAT 59.901 45.455 9.47 0.00 43.06 2.71
3699 4767 3.313249 CGCTGGATGCATTCAAGACAATA 59.687 43.478 9.47 0.00 43.06 1.90
3700 4768 4.201940 CGCTGGATGCATTCAAGACAATAA 60.202 41.667 9.47 0.00 43.06 1.40
3701 4769 5.506815 CGCTGGATGCATTCAAGACAATAAT 60.507 40.000 9.47 0.00 43.06 1.28
3702 4770 5.919141 GCTGGATGCATTCAAGACAATAATC 59.081 40.000 9.47 0.00 42.31 1.75
3703 4771 6.460537 GCTGGATGCATTCAAGACAATAATCA 60.461 38.462 9.47 0.00 42.31 2.57
3704 4772 7.591421 TGGATGCATTCAAGACAATAATCAT 57.409 32.000 4.79 0.00 0.00 2.45
3705 4773 7.430441 TGGATGCATTCAAGACAATAATCATG 58.570 34.615 4.79 0.00 0.00 3.07
3706 4774 6.866770 GGATGCATTCAAGACAATAATCATGG 59.133 38.462 0.00 0.00 0.00 3.66
3707 4775 7.255695 GGATGCATTCAAGACAATAATCATGGA 60.256 37.037 0.00 0.00 0.00 3.41
3708 4776 6.798482 TGCATTCAAGACAATAATCATGGAC 58.202 36.000 0.00 0.00 0.00 4.02
3709 4777 6.183360 TGCATTCAAGACAATAATCATGGACC 60.183 38.462 0.00 0.00 0.00 4.46
3710 4778 6.736794 GCATTCAAGACAATAATCATGGACCC 60.737 42.308 0.00 0.00 0.00 4.46
3711 4779 4.792068 TCAAGACAATAATCATGGACCCC 58.208 43.478 0.00 0.00 0.00 4.95
3712 4780 4.478317 TCAAGACAATAATCATGGACCCCT 59.522 41.667 0.00 0.00 0.00 4.79
3713 4781 5.669904 TCAAGACAATAATCATGGACCCCTA 59.330 40.000 0.00 0.00 0.00 3.53
3714 4782 6.332635 TCAAGACAATAATCATGGACCCCTAT 59.667 38.462 0.00 0.00 0.00 2.57
3715 4783 7.515861 TCAAGACAATAATCATGGACCCCTATA 59.484 37.037 0.00 0.00 0.00 1.31
3716 4784 7.502060 AGACAATAATCATGGACCCCTATAG 57.498 40.000 0.00 0.00 0.00 1.31
3717 4785 7.025620 AGACAATAATCATGGACCCCTATAGT 58.974 38.462 0.00 0.00 0.00 2.12
3718 4786 7.020827 ACAATAATCATGGACCCCTATAGTG 57.979 40.000 0.00 0.00 0.00 2.74
3719 4787 6.792473 ACAATAATCATGGACCCCTATAGTGA 59.208 38.462 0.00 0.00 0.00 3.41
3720 4788 7.038017 ACAATAATCATGGACCCCTATAGTGAG 60.038 40.741 0.00 0.00 0.00 3.51
3721 4789 3.260269 TCATGGACCCCTATAGTGAGG 57.740 52.381 0.00 0.00 36.23 3.86
3730 4798 1.607628 CCTATAGTGAGGGGACGTTCG 59.392 57.143 0.00 0.00 32.39 3.95
3731 4799 2.295885 CTATAGTGAGGGGACGTTCGT 58.704 52.381 0.00 0.00 0.00 3.85
3732 4800 2.425143 ATAGTGAGGGGACGTTCGTA 57.575 50.000 0.00 0.00 0.00 3.43
3733 4801 2.425143 TAGTGAGGGGACGTTCGTAT 57.575 50.000 0.00 0.00 0.00 3.06
3734 4802 1.553706 AGTGAGGGGACGTTCGTATT 58.446 50.000 0.00 0.00 0.00 1.89
3735 4803 1.897802 AGTGAGGGGACGTTCGTATTT 59.102 47.619 0.00 0.00 0.00 1.40
3736 4804 1.997606 GTGAGGGGACGTTCGTATTTG 59.002 52.381 0.00 0.00 0.00 2.32
3737 4805 1.004595 GAGGGGACGTTCGTATTTGC 58.995 55.000 0.00 0.00 0.00 3.68
3738 4806 0.738412 AGGGGACGTTCGTATTTGCG 60.738 55.000 0.00 0.00 0.00 4.85
3739 4807 0.737019 GGGGACGTTCGTATTTGCGA 60.737 55.000 0.00 0.00 39.28 5.10
3740 4808 1.070038 GGGACGTTCGTATTTGCGAA 58.930 50.000 0.00 0.00 46.78 4.70
3765 4833 4.442375 TTTTTCCTGCAAAAACGTCAGA 57.558 36.364 2.95 0.00 38.76 3.27
3766 4834 4.442375 TTTTCCTGCAAAAACGTCAGAA 57.558 36.364 2.95 0.00 30.58 3.02
3767 4835 4.442375 TTTCCTGCAAAAACGTCAGAAA 57.558 36.364 2.95 0.54 0.00 2.52
3768 4836 3.414549 TCCTGCAAAAACGTCAGAAAC 57.585 42.857 2.95 0.00 0.00 2.78
3769 4837 3.013921 TCCTGCAAAAACGTCAGAAACT 58.986 40.909 2.95 0.00 0.00 2.66
3770 4838 3.064820 TCCTGCAAAAACGTCAGAAACTC 59.935 43.478 2.95 0.00 0.00 3.01
3771 4839 3.065371 CCTGCAAAAACGTCAGAAACTCT 59.935 43.478 2.95 0.00 0.00 3.24
3772 4840 4.014847 TGCAAAAACGTCAGAAACTCTG 57.985 40.909 0.00 0.00 45.59 3.35
3784 4852 3.330267 AGAAACTCTGACGATTTCTGGC 58.670 45.455 0.00 0.00 40.35 4.85
3785 4853 2.839486 AACTCTGACGATTTCTGGCA 57.161 45.000 0.00 0.00 0.00 4.92
3786 4854 2.839486 ACTCTGACGATTTCTGGCAA 57.161 45.000 0.00 0.00 0.00 4.52
3787 4855 3.126001 ACTCTGACGATTTCTGGCAAA 57.874 42.857 0.00 0.00 0.00 3.68
3788 4856 3.070018 ACTCTGACGATTTCTGGCAAAG 58.930 45.455 0.00 0.00 0.00 2.77
3789 4857 1.806542 TCTGACGATTTCTGGCAAAGC 59.193 47.619 0.00 0.00 0.00 3.51
3790 4858 1.536766 CTGACGATTTCTGGCAAAGCA 59.463 47.619 0.00 0.00 0.00 3.91
3791 4859 1.952990 TGACGATTTCTGGCAAAGCAA 59.047 42.857 0.00 0.00 0.00 3.91
3792 4860 2.030893 TGACGATTTCTGGCAAAGCAAG 60.031 45.455 0.00 0.00 0.00 4.01
3793 4861 2.226437 GACGATTTCTGGCAAAGCAAGA 59.774 45.455 0.00 0.00 36.75 3.02
3794 4862 2.622942 ACGATTTCTGGCAAAGCAAGAA 59.377 40.909 4.76 4.76 45.57 2.52
3795 4863 3.256631 ACGATTTCTGGCAAAGCAAGAAT 59.743 39.130 9.45 1.26 46.34 2.40
3796 4864 4.240096 CGATTTCTGGCAAAGCAAGAATT 58.760 39.130 9.45 6.46 46.34 2.17
3797 4865 4.687483 CGATTTCTGGCAAAGCAAGAATTT 59.313 37.500 9.45 1.53 46.34 1.82
3798 4866 5.389098 CGATTTCTGGCAAAGCAAGAATTTG 60.389 40.000 9.45 6.73 46.34 2.32
3821 4889 7.787823 TGCTTTAAAAATTTGTTGTGTTTGC 57.212 28.000 0.00 0.00 0.00 3.68
3822 4890 7.588512 TGCTTTAAAAATTTGTTGTGTTTGCT 58.411 26.923 0.00 0.00 0.00 3.91
3823 4891 8.078596 TGCTTTAAAAATTTGTTGTGTTTGCTT 58.921 25.926 0.00 0.00 0.00 3.91
3824 4892 9.548208 GCTTTAAAAATTTGTTGTGTTTGCTTA 57.452 25.926 0.00 0.00 0.00 3.09
3833 4901 9.771915 ATTTGTTGTGTTTGCTTAAAGAAATTG 57.228 25.926 0.00 0.00 0.00 2.32
3834 4902 6.770076 TGTTGTGTTTGCTTAAAGAAATTGC 58.230 32.000 0.00 0.00 0.00 3.56
3835 4903 5.633996 TGTGTTTGCTTAAAGAAATTGCG 57.366 34.783 0.00 0.00 0.00 4.85
3836 4904 5.344066 TGTGTTTGCTTAAAGAAATTGCGA 58.656 33.333 0.00 0.00 0.00 5.10
3837 4905 5.982516 TGTGTTTGCTTAAAGAAATTGCGAT 59.017 32.000 0.00 0.00 0.00 4.58
3838 4906 6.074409 TGTGTTTGCTTAAAGAAATTGCGATG 60.074 34.615 0.00 0.00 0.00 3.84
3839 4907 5.107530 TGTTTGCTTAAAGAAATTGCGATGC 60.108 36.000 0.00 0.00 0.00 3.91
3840 4908 4.439305 TGCTTAAAGAAATTGCGATGCT 57.561 36.364 0.00 0.00 0.00 3.79
3841 4909 4.414852 TGCTTAAAGAAATTGCGATGCTC 58.585 39.130 0.00 0.00 0.00 4.26
3842 4910 4.156556 TGCTTAAAGAAATTGCGATGCTCT 59.843 37.500 0.00 0.00 0.00 4.09
3843 4911 4.498323 GCTTAAAGAAATTGCGATGCTCTG 59.502 41.667 0.00 0.00 0.00 3.35
3844 4912 5.627499 TTAAAGAAATTGCGATGCTCTGT 57.373 34.783 0.00 0.00 0.00 3.41
3845 4913 6.675486 GCTTAAAGAAATTGCGATGCTCTGTA 60.675 38.462 0.00 0.00 0.00 2.74
3846 4914 4.606457 AAGAAATTGCGATGCTCTGTAC 57.394 40.909 0.00 0.00 0.00 2.90
3847 4915 3.599343 AGAAATTGCGATGCTCTGTACA 58.401 40.909 0.00 0.00 0.00 2.90
3848 4916 4.002982 AGAAATTGCGATGCTCTGTACAA 58.997 39.130 0.00 0.00 0.00 2.41
3849 4917 3.747099 AATTGCGATGCTCTGTACAAC 57.253 42.857 0.00 0.00 0.00 3.32
3850 4918 2.162319 TTGCGATGCTCTGTACAACA 57.838 45.000 0.00 0.00 0.00 3.33
3851 4919 2.385013 TGCGATGCTCTGTACAACAT 57.615 45.000 0.00 1.02 0.00 2.71
3852 4920 3.518634 TGCGATGCTCTGTACAACATA 57.481 42.857 0.00 0.00 0.00 2.29
3853 4921 3.855858 TGCGATGCTCTGTACAACATAA 58.144 40.909 0.00 0.00 0.00 1.90
3854 4922 4.441792 TGCGATGCTCTGTACAACATAAT 58.558 39.130 0.00 0.00 0.00 1.28
3855 4923 4.875536 TGCGATGCTCTGTACAACATAATT 59.124 37.500 0.00 0.00 0.00 1.40
3856 4924 5.200454 GCGATGCTCTGTACAACATAATTG 58.800 41.667 0.00 0.00 0.00 2.32
3857 4925 5.200454 CGATGCTCTGTACAACATAATTGC 58.800 41.667 0.00 0.00 0.00 3.56
3858 4926 4.963276 TGCTCTGTACAACATAATTGCC 57.037 40.909 0.00 0.00 0.00 4.52
3859 4927 3.373748 TGCTCTGTACAACATAATTGCCG 59.626 43.478 0.00 0.00 0.00 5.69
3860 4928 3.374058 GCTCTGTACAACATAATTGCCGT 59.626 43.478 0.00 0.00 0.00 5.68
3861 4929 4.727734 GCTCTGTACAACATAATTGCCGTG 60.728 45.833 0.00 0.00 0.00 4.94
3862 4930 4.570930 TCTGTACAACATAATTGCCGTGA 58.429 39.130 0.00 0.00 0.00 4.35
3863 4931 4.998033 TCTGTACAACATAATTGCCGTGAA 59.002 37.500 0.00 0.00 0.00 3.18
3864 4932 5.470437 TCTGTACAACATAATTGCCGTGAAA 59.530 36.000 0.00 0.00 0.00 2.69
3865 4933 6.017026 TCTGTACAACATAATTGCCGTGAAAA 60.017 34.615 0.00 0.00 0.00 2.29
3866 4934 6.504398 TGTACAACATAATTGCCGTGAAAAA 58.496 32.000 0.00 0.00 0.00 1.94
3867 4935 5.898630 ACAACATAATTGCCGTGAAAAAC 57.101 34.783 0.00 0.00 0.00 2.43
3880 4948 4.084447 GTGAAAAACGTTCGCAAATGTC 57.916 40.909 0.00 0.00 33.42 3.06
3881 4949 3.544285 GTGAAAAACGTTCGCAAATGTCA 59.456 39.130 0.00 0.00 33.42 3.58
3882 4950 3.544285 TGAAAAACGTTCGCAAATGTCAC 59.456 39.130 0.00 0.00 33.42 3.67
3883 4951 3.414549 AAAACGTTCGCAAATGTCACT 57.585 38.095 0.00 0.00 33.42 3.41
3884 4952 2.663279 AACGTTCGCAAATGTCACTC 57.337 45.000 0.00 0.00 33.42 3.51
3885 4953 0.865769 ACGTTCGCAAATGTCACTCC 59.134 50.000 0.00 0.00 28.07 3.85
3886 4954 0.165944 CGTTCGCAAATGTCACTCCC 59.834 55.000 0.00 0.00 0.00 4.30
3887 4955 0.521735 GTTCGCAAATGTCACTCCCC 59.478 55.000 0.00 0.00 0.00 4.81
3888 4956 0.608035 TTCGCAAATGTCACTCCCCC 60.608 55.000 0.00 0.00 0.00 5.40
3889 4957 1.303236 CGCAAATGTCACTCCCCCA 60.303 57.895 0.00 0.00 0.00 4.96
3890 4958 1.308069 CGCAAATGTCACTCCCCCAG 61.308 60.000 0.00 0.00 0.00 4.45
3891 4959 1.598701 GCAAATGTCACTCCCCCAGC 61.599 60.000 0.00 0.00 0.00 4.85
3892 4960 0.251297 CAAATGTCACTCCCCCAGCA 60.251 55.000 0.00 0.00 0.00 4.41
3893 4961 0.482446 AAATGTCACTCCCCCAGCAA 59.518 50.000 0.00 0.00 0.00 3.91
3894 4962 0.482446 AATGTCACTCCCCCAGCAAA 59.518 50.000 0.00 0.00 0.00 3.68
3895 4963 0.706433 ATGTCACTCCCCCAGCAAAT 59.294 50.000 0.00 0.00 0.00 2.32
3896 4964 0.251297 TGTCACTCCCCCAGCAAATG 60.251 55.000 0.00 0.00 0.00 2.32
3897 4965 0.251341 GTCACTCCCCCAGCAAATGT 60.251 55.000 0.00 0.00 0.00 2.71
3898 4966 0.482446 TCACTCCCCCAGCAAATGTT 59.518 50.000 0.00 0.00 0.00 2.71
3899 4967 1.133199 TCACTCCCCCAGCAAATGTTT 60.133 47.619 0.00 0.00 0.00 2.83
3900 4968 1.001181 CACTCCCCCAGCAAATGTTTG 59.999 52.381 1.19 1.19 41.03 2.93
3923 4991 4.572909 CTGAATAGCATTCCCGATGATCA 58.427 43.478 0.00 0.00 38.03 2.92
3924 4992 5.169992 TGAATAGCATTCCCGATGATCAT 57.830 39.130 8.25 8.25 38.03 2.45
3925 4993 6.298441 TGAATAGCATTCCCGATGATCATA 57.702 37.500 8.54 0.00 38.03 2.15
3926 4994 6.343703 TGAATAGCATTCCCGATGATCATAG 58.656 40.000 8.54 8.64 38.03 2.23
3927 4995 6.155049 TGAATAGCATTCCCGATGATCATAGA 59.845 38.462 16.51 7.76 38.03 1.98
3928 4996 4.897509 AGCATTCCCGATGATCATAGAA 57.102 40.909 16.51 15.27 38.03 2.10
3929 4997 5.233083 AGCATTCCCGATGATCATAGAAA 57.767 39.130 16.51 10.68 38.03 2.52
3930 4998 5.243981 AGCATTCCCGATGATCATAGAAAG 58.756 41.667 16.51 13.21 38.03 2.62
3931 4999 4.999950 GCATTCCCGATGATCATAGAAAGT 59.000 41.667 16.51 1.29 38.03 2.66
3932 5000 5.471456 GCATTCCCGATGATCATAGAAAGTT 59.529 40.000 16.51 0.68 38.03 2.66
3933 5001 6.348050 GCATTCCCGATGATCATAGAAAGTTC 60.348 42.308 16.51 0.00 38.03 3.01
3934 5002 5.869649 TCCCGATGATCATAGAAAGTTCA 57.130 39.130 16.51 0.00 0.00 3.18
3935 5003 6.425210 TCCCGATGATCATAGAAAGTTCAT 57.575 37.500 16.51 0.00 0.00 2.57
3936 5004 6.459066 TCCCGATGATCATAGAAAGTTCATC 58.541 40.000 16.51 0.00 38.18 2.92
3937 5005 5.641209 CCCGATGATCATAGAAAGTTCATCC 59.359 44.000 16.51 0.00 38.26 3.51
3938 5006 6.226052 CCGATGATCATAGAAAGTTCATCCA 58.774 40.000 16.51 0.00 38.26 3.41
3939 5007 6.707608 CCGATGATCATAGAAAGTTCATCCAA 59.292 38.462 16.51 0.00 38.26 3.53
3940 5008 7.307632 CCGATGATCATAGAAAGTTCATCCAAC 60.308 40.741 16.51 0.00 38.26 3.77
3941 5009 7.225341 CGATGATCATAGAAAGTTCATCCAACA 59.775 37.037 8.54 0.00 38.26 3.33
3942 5010 8.812513 ATGATCATAGAAAGTTCATCCAACAA 57.187 30.769 6.36 0.00 37.48 2.83
3943 5011 8.272545 TGATCATAGAAAGTTCATCCAACAAG 57.727 34.615 0.00 0.00 37.48 3.16
3944 5012 7.884877 TGATCATAGAAAGTTCATCCAACAAGT 59.115 33.333 0.00 0.00 37.48 3.16
3945 5013 8.641498 ATCATAGAAAGTTCATCCAACAAGTT 57.359 30.769 0.00 0.00 37.48 2.66
3946 5014 8.099364 TCATAGAAAGTTCATCCAACAAGTTC 57.901 34.615 0.00 0.00 37.48 3.01
3947 5015 5.774498 AGAAAGTTCATCCAACAAGTTCC 57.226 39.130 0.00 0.00 37.48 3.62
3948 5016 5.200483 AGAAAGTTCATCCAACAAGTTCCA 58.800 37.500 0.00 0.00 37.48 3.53
3949 5017 5.656416 AGAAAGTTCATCCAACAAGTTCCAA 59.344 36.000 0.00 0.00 37.48 3.53
3950 5018 5.930837 AAGTTCATCCAACAAGTTCCAAA 57.069 34.783 0.00 0.00 37.48 3.28
3951 5019 5.520376 AGTTCATCCAACAAGTTCCAAAG 57.480 39.130 0.00 0.00 37.48 2.77
3952 5020 5.200483 AGTTCATCCAACAAGTTCCAAAGA 58.800 37.500 0.00 0.00 37.48 2.52
3953 5021 5.656416 AGTTCATCCAACAAGTTCCAAAGAA 59.344 36.000 0.00 0.00 37.48 2.52
3954 5022 6.154363 AGTTCATCCAACAAGTTCCAAAGAAA 59.846 34.615 0.00 0.00 37.48 2.52
3955 5023 6.147864 TCATCCAACAAGTTCCAAAGAAAG 57.852 37.500 0.00 0.00 32.58 2.62
3956 5024 5.656416 TCATCCAACAAGTTCCAAAGAAAGT 59.344 36.000 0.00 0.00 32.58 2.66
3957 5025 5.993748 TCCAACAAGTTCCAAAGAAAGTT 57.006 34.783 0.00 0.00 32.58 2.66
3958 5026 5.961272 TCCAACAAGTTCCAAAGAAAGTTC 58.039 37.500 0.00 0.00 32.58 3.01
3959 5027 5.478679 TCCAACAAGTTCCAAAGAAAGTTCA 59.521 36.000 0.00 0.00 32.58 3.18
3960 5028 6.154363 TCCAACAAGTTCCAAAGAAAGTTCAT 59.846 34.615 0.00 0.00 32.58 2.57
3961 5029 6.476706 CCAACAAGTTCCAAAGAAAGTTCATC 59.523 38.462 0.00 0.00 32.58 2.92
3962 5030 6.149129 ACAAGTTCCAAAGAAAGTTCATCC 57.851 37.500 0.00 0.00 32.58 3.51
3963 5031 5.656416 ACAAGTTCCAAAGAAAGTTCATCCA 59.344 36.000 0.00 0.00 32.58 3.41
3964 5032 6.154363 ACAAGTTCCAAAGAAAGTTCATCCAA 59.846 34.615 0.00 0.00 32.58 3.53
3965 5033 6.149129 AGTTCCAAAGAAAGTTCATCCAAC 57.851 37.500 0.00 0.00 32.58 3.77
3966 5034 5.656416 AGTTCCAAAGAAAGTTCATCCAACA 59.344 36.000 0.00 0.00 37.48 3.33
3967 5035 6.154363 AGTTCCAAAGAAAGTTCATCCAACAA 59.846 34.615 0.00 0.00 37.48 2.83
3968 5036 6.147864 TCCAAAGAAAGTTCATCCAACAAG 57.852 37.500 0.00 0.00 37.48 3.16
3969 5037 5.656416 TCCAAAGAAAGTTCATCCAACAAGT 59.344 36.000 0.00 0.00 37.48 3.16
3970 5038 6.154363 TCCAAAGAAAGTTCATCCAACAAGTT 59.846 34.615 0.00 0.00 37.48 2.66
3971 5039 6.256321 CCAAAGAAAGTTCATCCAACAAGTTG 59.744 38.462 0.00 0.00 37.48 3.16
3972 5040 6.773976 AAGAAAGTTCATCCAACAAGTTGA 57.226 33.333 10.54 1.68 42.93 3.18
3973 5041 6.136541 AGAAAGTTCATCCAACAAGTTGAC 57.863 37.500 10.54 4.37 42.93 3.18
3974 5042 5.652014 AGAAAGTTCATCCAACAAGTTGACA 59.348 36.000 10.54 1.27 42.93 3.58
3975 5043 5.505173 AAGTTCATCCAACAAGTTGACAG 57.495 39.130 10.54 3.85 42.93 3.51
3976 5044 4.780815 AGTTCATCCAACAAGTTGACAGA 58.219 39.130 10.54 3.00 42.93 3.41
3977 5045 5.192927 AGTTCATCCAACAAGTTGACAGAA 58.807 37.500 10.54 10.85 42.93 3.02
3978 5046 5.652014 AGTTCATCCAACAAGTTGACAGAAA 59.348 36.000 10.54 0.37 42.93 2.52
3979 5047 6.322201 AGTTCATCCAACAAGTTGACAGAAAT 59.678 34.615 10.54 10.23 42.93 2.17
3980 5048 7.502226 AGTTCATCCAACAAGTTGACAGAAATA 59.498 33.333 10.54 0.00 42.93 1.40
3981 5049 8.299570 GTTCATCCAACAAGTTGACAGAAATAT 58.700 33.333 10.54 0.00 42.93 1.28
3982 5050 8.044060 TCATCCAACAAGTTGACAGAAATATC 57.956 34.615 10.54 0.00 42.93 1.63
3983 5051 7.665145 TCATCCAACAAGTTGACAGAAATATCA 59.335 33.333 10.54 0.00 42.93 2.15
3984 5052 8.464404 CATCCAACAAGTTGACAGAAATATCAT 58.536 33.333 10.54 0.00 42.93 2.45
3985 5053 8.044060 TCCAACAAGTTGACAGAAATATCATC 57.956 34.615 10.54 0.00 42.93 2.92
3986 5054 7.665145 TCCAACAAGTTGACAGAAATATCATCA 59.335 33.333 10.54 0.00 42.93 3.07
3987 5055 7.966753 CCAACAAGTTGACAGAAATATCATCAG 59.033 37.037 10.54 0.00 42.93 2.90
3988 5056 8.724229 CAACAAGTTGACAGAAATATCATCAGA 58.276 33.333 10.54 0.00 42.93 3.27
3989 5057 9.458727 AACAAGTTGACAGAAATATCATCAGAT 57.541 29.630 10.54 0.00 38.29 2.90
4001 5069 3.959535 TCATCAGATATACATGCCGCA 57.040 42.857 0.00 0.00 0.00 5.69
4004 5072 5.628433 ATCATCAGATATACATGCCGCATGT 60.628 40.000 34.80 34.80 43.90 3.21
4013 5081 1.032014 ATGCCGCATGTATTCCCAAC 58.968 50.000 4.68 0.00 0.00 3.77
4017 5085 2.884639 GCCGCATGTATTCCCAACTAAT 59.115 45.455 0.00 0.00 0.00 1.73
4019 5087 4.517453 GCCGCATGTATTCCCAACTAATAA 59.483 41.667 0.00 0.00 0.00 1.40
4029 5097 9.516314 GTATTCCCAACTAATAATGCTCAAAAC 57.484 33.333 0.00 0.00 0.00 2.43
4031 5099 7.531857 TCCCAACTAATAATGCTCAAAACAA 57.468 32.000 0.00 0.00 0.00 2.83
4041 5110 9.507280 AATAATGCTCAAAACAATCAATCGTAG 57.493 29.630 0.00 0.00 0.00 3.51
4053 5122 8.367660 ACAATCAATCGTAGTGGGATATAGAT 57.632 34.615 0.00 0.00 0.00 1.98
4054 5123 8.816894 ACAATCAATCGTAGTGGGATATAGATT 58.183 33.333 0.00 0.00 0.00 2.40
4056 5125 7.170393 TCAATCGTAGTGGGATATAGATTGG 57.830 40.000 13.14 0.00 41.92 3.16
4057 5126 5.599999 ATCGTAGTGGGATATAGATTGGC 57.400 43.478 0.00 0.00 0.00 4.52
4058 5127 4.412843 TCGTAGTGGGATATAGATTGGCA 58.587 43.478 0.00 0.00 0.00 4.92
4075 5146 0.318107 GCACAACACACCAGATGCAC 60.318 55.000 0.00 0.00 33.27 4.57
4077 5148 1.165907 ACAACACACCAGATGCACCG 61.166 55.000 0.00 0.00 0.00 4.94
4106 5177 7.502561 GGTTAAACTGGGATTAATACAGCATCT 59.497 37.037 15.80 4.92 35.70 2.90
4119 5190 2.169144 ACAGCATCTCATCGGATCACAA 59.831 45.455 0.00 0.00 0.00 3.33
4125 5196 2.965147 TCTCATCGGATCACAAGGCATA 59.035 45.455 0.00 0.00 0.00 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 53 1.294659 CTGGCCTTCAACTGCGAGAC 61.295 60.000 3.32 0.00 35.60 3.36
51 54 1.004560 CTGGCCTTCAACTGCGAGA 60.005 57.895 3.32 0.00 35.60 4.04
72 79 0.463833 GAATGGGTACAGCGAAGGGG 60.464 60.000 0.00 0.00 0.00 4.79
143 150 6.426633 GCCTAGTTTGGTTGCACATTTTAAAT 59.573 34.615 0.00 0.00 0.00 1.40
153 160 1.702957 AGGTAGCCTAGTTTGGTTGCA 59.297 47.619 0.00 0.00 28.47 4.08
154 161 2.491675 AGGTAGCCTAGTTTGGTTGC 57.508 50.000 0.00 0.00 28.47 4.17
155 162 4.820894 AGTAGGTAGCCTAGTTTGGTTG 57.179 45.455 0.00 0.00 36.45 3.77
156 163 4.842380 TCAAGTAGGTAGCCTAGTTTGGTT 59.158 41.667 11.42 0.00 44.60 3.67
157 164 4.422984 TCAAGTAGGTAGCCTAGTTTGGT 58.577 43.478 11.42 0.00 44.60 3.67
158 165 5.128827 TCATCAAGTAGGTAGCCTAGTTTGG 59.871 44.000 11.42 3.98 44.60 3.28
160 167 6.611642 TCATCATCAAGTAGGTAGCCTAGTTT 59.388 38.462 11.42 0.72 44.60 2.66
161 168 6.136857 TCATCATCAAGTAGGTAGCCTAGTT 58.863 40.000 8.94 8.94 46.98 2.24
162 169 5.706447 TCATCATCAAGTAGGTAGCCTAGT 58.294 41.667 0.00 0.00 41.12 2.57
164 171 6.314917 TCATCATCATCAAGTAGGTAGCCTA 58.685 40.000 0.00 0.00 34.61 3.93
166 173 5.474578 TCATCATCATCAAGTAGGTAGCC 57.525 43.478 0.00 0.00 0.00 3.93
444 463 5.433526 CGATCCATTACTTTTACTTGGGGA 58.566 41.667 0.00 0.00 0.00 4.81
546 574 1.457303 CACTAGTGCTTGCGAAGACAC 59.543 52.381 10.54 11.55 36.47 3.67
554 582 2.284190 GGAGATTCCACTAGTGCTTGC 58.716 52.381 17.86 6.63 36.28 4.01
568 596 1.277557 GTGACTGGAGCTGTGGAGATT 59.722 52.381 0.00 0.00 0.00 2.40
573 601 1.670406 GCTGTGACTGGAGCTGTGG 60.670 63.158 0.00 0.00 32.12 4.17
574 602 1.670406 GGCTGTGACTGGAGCTGTG 60.670 63.158 0.00 0.00 35.42 3.66
575 603 2.746359 GGCTGTGACTGGAGCTGT 59.254 61.111 0.00 0.00 35.42 4.40
576 604 2.046507 GGGCTGTGACTGGAGCTG 60.047 66.667 0.00 0.00 35.42 4.24
577 605 3.699894 CGGGCTGTGACTGGAGCT 61.700 66.667 0.00 0.00 35.42 4.09
579 607 2.290122 CTAGCGGGCTGTGACTGGAG 62.290 65.000 2.86 0.00 0.00 3.86
580 608 2.283604 TAGCGGGCTGTGACTGGA 60.284 61.111 2.86 0.00 0.00 3.86
581 609 2.185350 CTAGCGGGCTGTGACTGG 59.815 66.667 2.86 0.00 0.00 4.00
582 610 1.153745 GTCTAGCGGGCTGTGACTG 60.154 63.158 16.11 0.00 32.38 3.51
583 611 2.701780 CGTCTAGCGGGCTGTGACT 61.702 63.158 18.97 0.00 36.85 3.41
584 612 2.202623 CGTCTAGCGGGCTGTGAC 60.203 66.667 2.86 10.31 36.85 3.67
646 674 8.414003 GGAAAGAAGAAGACCAAAAGTTTACAT 58.586 33.333 0.00 0.00 0.00 2.29
651 679 6.183360 CGAAGGAAAGAAGAAGACCAAAAGTT 60.183 38.462 0.00 0.00 0.00 2.66
652 680 5.297029 CGAAGGAAAGAAGAAGACCAAAAGT 59.703 40.000 0.00 0.00 0.00 2.66
653 681 5.297029 ACGAAGGAAAGAAGAAGACCAAAAG 59.703 40.000 0.00 0.00 0.00 2.27
654 682 5.190677 ACGAAGGAAAGAAGAAGACCAAAA 58.809 37.500 0.00 0.00 0.00 2.44
659 690 3.425858 CACGACGAAGGAAAGAAGAAGAC 59.574 47.826 0.00 0.00 0.00 3.01
666 697 2.875087 TGTTCACGACGAAGGAAAGA 57.125 45.000 0.00 0.00 33.09 2.52
733 777 8.911918 TTTTAGCTGTTACTCATACAAAAGGA 57.088 30.769 0.00 0.00 0.00 3.36
748 792 8.673711 TGCTCACGATTATTATTTTTAGCTGTT 58.326 29.630 0.00 0.00 0.00 3.16
749 793 8.208718 TGCTCACGATTATTATTTTTAGCTGT 57.791 30.769 0.00 0.00 0.00 4.40
750 794 9.110617 CATGCTCACGATTATTATTTTTAGCTG 57.889 33.333 0.00 0.00 0.00 4.24
751 795 9.056005 TCATGCTCACGATTATTATTTTTAGCT 57.944 29.630 0.00 0.00 0.00 3.32
752 796 9.663904 TTCATGCTCACGATTATTATTTTTAGC 57.336 29.630 0.00 0.00 0.00 3.09
759 803 9.935241 AGAATACTTCATGCTCACGATTATTAT 57.065 29.630 0.00 0.00 0.00 1.28
760 804 9.196552 CAGAATACTTCATGCTCACGATTATTA 57.803 33.333 0.00 0.00 0.00 0.98
761 805 7.307632 GCAGAATACTTCATGCTCACGATTATT 60.308 37.037 0.00 0.00 33.76 1.40
762 806 6.146837 GCAGAATACTTCATGCTCACGATTAT 59.853 38.462 0.00 0.00 33.76 1.28
763 807 5.463392 GCAGAATACTTCATGCTCACGATTA 59.537 40.000 0.00 0.00 33.76 1.75
834 878 4.410743 GCTTGCGAGGCTGGCAAC 62.411 66.667 29.45 21.90 44.79 4.17
1633 2069 4.973168 ACTTGCAGAACTGAATCTACCAA 58.027 39.130 5.97 0.00 0.00 3.67
1676 2113 1.709147 GCTCCTTGGCTACATGTGCG 61.709 60.000 9.11 0.16 0.00 5.34
1678 2115 1.065926 TCAGCTCCTTGGCTACATGTG 60.066 52.381 9.11 0.00 41.00 3.21
1858 2310 7.747888 ACAAACTTAACAAAAATGAAAGTGCC 58.252 30.769 0.00 0.00 31.09 5.01
1917 2369 0.180171 AAGGCACCCAACAAAAAGCC 59.820 50.000 0.00 0.00 42.31 4.35
2100 2557 2.670229 GCGACGGTAACTGAAGATGTGA 60.670 50.000 0.00 0.00 0.00 3.58
2101 2558 1.654105 GCGACGGTAACTGAAGATGTG 59.346 52.381 0.00 0.00 0.00 3.21
2103 2560 2.279582 AGCGACGGTAACTGAAGATG 57.720 50.000 0.00 0.00 0.00 2.90
2127 2584 9.387397 AGGGGAATCAAAAGGTTAAATAGAAAA 57.613 29.630 0.00 0.00 0.00 2.29
2133 2590 7.387265 AAACAGGGGAATCAAAAGGTTAAAT 57.613 32.000 0.00 0.00 0.00 1.40
2136 2593 6.816616 AAAAACAGGGGAATCAAAAGGTTA 57.183 33.333 0.00 0.00 0.00 2.85
2137 2594 5.708736 AAAAACAGGGGAATCAAAAGGTT 57.291 34.783 0.00 0.00 0.00 3.50
2144 2601 6.239743 GGGAAAACATAAAAACAGGGGAATCA 60.240 38.462 0.00 0.00 0.00 2.57
2146 2603 5.608860 TGGGAAAACATAAAAACAGGGGAAT 59.391 36.000 0.00 0.00 0.00 3.01
2192 2649 7.630924 CACATTAGCAACTACCTATAAGCAAC 58.369 38.462 0.00 0.00 0.00 4.17
2193 2650 6.260050 GCACATTAGCAACTACCTATAAGCAA 59.740 38.462 0.00 0.00 0.00 3.91
2194 2651 5.758296 GCACATTAGCAACTACCTATAAGCA 59.242 40.000 0.00 0.00 0.00 3.91
2195 2652 5.992217 AGCACATTAGCAACTACCTATAAGC 59.008 40.000 0.00 0.00 36.85 3.09
2196 2653 6.986817 ACAGCACATTAGCAACTACCTATAAG 59.013 38.462 0.00 0.00 36.85 1.73
2197 2654 6.761242 CACAGCACATTAGCAACTACCTATAA 59.239 38.462 0.00 0.00 36.85 0.98
2198 2655 6.097696 TCACAGCACATTAGCAACTACCTATA 59.902 38.462 0.00 0.00 36.85 1.31
2199 2656 5.104941 TCACAGCACATTAGCAACTACCTAT 60.105 40.000 0.00 0.00 36.85 2.57
2200 2657 4.221924 TCACAGCACATTAGCAACTACCTA 59.778 41.667 0.00 0.00 36.85 3.08
2201 2658 3.007940 TCACAGCACATTAGCAACTACCT 59.992 43.478 0.00 0.00 36.85 3.08
2202 2659 3.125316 GTCACAGCACATTAGCAACTACC 59.875 47.826 0.00 0.00 36.85 3.18
2203 2660 3.997021 AGTCACAGCACATTAGCAACTAC 59.003 43.478 0.00 0.00 36.85 2.73
2204 2661 4.245660 GAGTCACAGCACATTAGCAACTA 58.754 43.478 0.00 0.00 36.85 2.24
2205 2662 3.070018 GAGTCACAGCACATTAGCAACT 58.930 45.455 0.00 0.00 36.85 3.16
2216 2687 3.660501 AGTTTATGTCGAGTCACAGCA 57.339 42.857 0.00 0.00 0.00 4.41
2246 2717 7.215085 ACGAAACAGTTCAAGTATAAAGGAGT 58.785 34.615 0.00 0.00 32.89 3.85
2303 2775 9.994432 GAACAAGTAGACAATCATTAATTCCAG 57.006 33.333 0.00 0.00 0.00 3.86
2570 3056 6.591834 CGGACTAGAACATGTGAAGAAGATTT 59.408 38.462 0.00 0.00 0.00 2.17
2571 3057 6.102663 CGGACTAGAACATGTGAAGAAGATT 58.897 40.000 0.00 0.00 0.00 2.40
2572 3058 5.394663 CCGGACTAGAACATGTGAAGAAGAT 60.395 44.000 0.00 0.00 0.00 2.40
2575 3061 3.830178 TCCGGACTAGAACATGTGAAGAA 59.170 43.478 0.00 0.00 0.00 2.52
2578 3064 5.925506 TTATCCGGACTAGAACATGTGAA 57.074 39.130 6.12 0.00 0.00 3.18
2627 3113 8.058847 AGGCCATAGAAACCTATACAAATTCAA 58.941 33.333 5.01 0.00 29.98 2.69
2635 3121 5.546621 TCACAGGCCATAGAAACCTATAC 57.453 43.478 5.01 0.00 30.84 1.47
2647 3133 1.380785 CCCAGCAATCACAGGCCAT 60.381 57.895 5.01 0.00 0.00 4.40
2692 3184 8.747538 TTTTGTTAAGAAAAGAGCTAGGTTCT 57.252 30.769 6.43 0.00 31.69 3.01
2717 3209 3.739519 GCATAGCGGAACTGAGATGAACT 60.740 47.826 0.00 0.00 0.00 3.01
2721 3213 1.506493 GGCATAGCGGAACTGAGATG 58.494 55.000 0.00 0.00 0.00 2.90
2742 3234 4.212847 GCAGAAATCTATCATGTGACGCAT 59.787 41.667 0.00 0.00 38.60 4.73
2746 3238 9.608617 CAATAATGCAGAAATCTATCATGTGAC 57.391 33.333 0.00 0.00 0.00 3.67
2758 3250 7.886629 ATAGTCACACCAATAATGCAGAAAT 57.113 32.000 0.00 0.00 0.00 2.17
2771 3263 5.629133 GCCAGAGGAATTAATAGTCACACCA 60.629 44.000 0.00 0.00 0.00 4.17
2776 3268 5.163195 GGAAGGCCAGAGGAATTAATAGTCA 60.163 44.000 5.01 0.00 0.00 3.41
2953 3639 3.782523 AGACCATGAAGCCTCCTTGATTA 59.217 43.478 0.00 0.00 0.00 1.75
2977 3663 2.808543 GACAAGTGATTTCGAAGGCAGT 59.191 45.455 0.00 0.90 0.00 4.40
3201 3887 5.505181 AACAGATTTGACATGGTAGGTCT 57.495 39.130 0.00 0.00 36.26 3.85
3202 3888 6.823689 ACATAACAGATTTGACATGGTAGGTC 59.176 38.462 0.00 0.00 25.34 3.85
3242 3928 0.467106 CACAACCACATCCACCACCA 60.467 55.000 0.00 0.00 0.00 4.17
3321 4007 9.717942 TCACCAAAGAAAAGAAAAGAAAAATCA 57.282 25.926 0.00 0.00 0.00 2.57
3369 4060 7.201266 GCAGATCATAACATGAACGTGAAAAAC 60.201 37.037 0.00 0.00 43.50 2.43
3413 4105 2.033299 CCACCAGCACACAAAGTTACAG 59.967 50.000 0.00 0.00 0.00 2.74
3427 4119 2.224305 GGTCATGATAGTACCCACCAGC 60.224 54.545 0.00 0.00 0.00 4.85
3437 4129 5.184096 CAGCCTTCGTATAGGTCATGATAGT 59.816 44.000 0.00 0.00 37.63 2.12
3440 4132 4.152647 TCAGCCTTCGTATAGGTCATGAT 58.847 43.478 0.00 0.00 37.63 2.45
3459 4159 9.775854 AAATACATATTGAGATCTCAGGTTCAG 57.224 33.333 23.92 15.37 41.13 3.02
3527 4227 9.862371 TTTTCTGTTAAGCTAATTGTTGTCAAA 57.138 25.926 0.00 0.00 37.11 2.69
3528 4228 9.296400 GTTTTCTGTTAAGCTAATTGTTGTCAA 57.704 29.630 0.00 0.00 37.98 3.18
3529 4229 7.642194 CGTTTTCTGTTAAGCTAATTGTTGTCA 59.358 33.333 0.00 0.00 0.00 3.58
3530 4230 7.112984 CCGTTTTCTGTTAAGCTAATTGTTGTC 59.887 37.037 0.00 0.00 0.00 3.18
3532 4232 6.129194 GCCGTTTTCTGTTAAGCTAATTGTTG 60.129 38.462 0.00 0.00 0.00 3.33
3533 4233 5.918576 GCCGTTTTCTGTTAAGCTAATTGTT 59.081 36.000 0.00 0.00 0.00 2.83
3534 4234 5.009210 TGCCGTTTTCTGTTAAGCTAATTGT 59.991 36.000 0.00 0.00 0.00 2.71
3535 4235 5.457140 TGCCGTTTTCTGTTAAGCTAATTG 58.543 37.500 0.00 0.00 0.00 2.32
3536 4236 5.699097 TGCCGTTTTCTGTTAAGCTAATT 57.301 34.783 0.00 0.00 0.00 1.40
3537 4237 5.897377 ATGCCGTTTTCTGTTAAGCTAAT 57.103 34.783 0.00 0.00 0.00 1.73
3541 4241 5.651172 AAAAATGCCGTTTTCTGTTAAGC 57.349 34.783 0.00 0.00 39.05 3.09
3555 4623 8.314143 TCAAATCAAATCAGAAGAAAAATGCC 57.686 30.769 0.00 0.00 0.00 4.40
3581 4649 6.480320 GCACTCTAGATCCAATACAAACGATT 59.520 38.462 0.00 0.00 0.00 3.34
3583 4651 5.105513 TGCACTCTAGATCCAATACAAACGA 60.106 40.000 0.00 0.00 0.00 3.85
3588 4656 7.603180 ATTACTGCACTCTAGATCCAATACA 57.397 36.000 0.00 0.00 0.00 2.29
3599 4667 6.505044 TGAACGTTCTATTACTGCACTCTA 57.495 37.500 27.32 0.00 0.00 2.43
3602 4670 6.398918 AGAATGAACGTTCTATTACTGCACT 58.601 36.000 27.32 13.95 36.71 4.40
3647 4715 2.109126 GTCTCCAGGAATGCACGCC 61.109 63.158 0.00 0.00 0.00 5.68
3648 4716 2.456119 CGTCTCCAGGAATGCACGC 61.456 63.158 0.00 0.00 0.00 5.34
3649 4717 0.803768 CTCGTCTCCAGGAATGCACG 60.804 60.000 0.00 0.00 0.00 5.34
3650 4718 1.086634 GCTCGTCTCCAGGAATGCAC 61.087 60.000 0.00 0.00 0.00 4.57
3651 4719 1.219124 GCTCGTCTCCAGGAATGCA 59.781 57.895 0.00 0.00 0.00 3.96
3652 4720 0.107945 AAGCTCGTCTCCAGGAATGC 60.108 55.000 0.00 0.00 0.00 3.56
3653 4721 1.472376 GGAAGCTCGTCTCCAGGAATG 60.472 57.143 0.00 0.00 0.00 2.67
3654 4722 0.827368 GGAAGCTCGTCTCCAGGAAT 59.173 55.000 0.00 0.00 0.00 3.01
3655 4723 0.251832 AGGAAGCTCGTCTCCAGGAA 60.252 55.000 5.00 0.00 0.00 3.36
3656 4724 0.251832 AAGGAAGCTCGTCTCCAGGA 60.252 55.000 5.00 0.00 0.00 3.86
3657 4725 1.135333 GTAAGGAAGCTCGTCTCCAGG 59.865 57.143 5.00 0.00 0.00 4.45
3658 4726 1.202200 CGTAAGGAAGCTCGTCTCCAG 60.202 57.143 5.00 0.00 0.00 3.86
3659 4727 0.809385 CGTAAGGAAGCTCGTCTCCA 59.191 55.000 5.00 0.00 0.00 3.86
3660 4728 0.525882 GCGTAAGGAAGCTCGTCTCC 60.526 60.000 0.00 0.00 38.28 3.71
3661 4729 0.452585 AGCGTAAGGAAGCTCGTCTC 59.547 55.000 0.00 0.00 39.98 3.36
3662 4730 0.171455 CAGCGTAAGGAAGCTCGTCT 59.829 55.000 0.00 0.00 42.52 4.18
3663 4731 0.802607 CCAGCGTAAGGAAGCTCGTC 60.803 60.000 0.00 0.00 42.52 4.20
3664 4732 1.215647 CCAGCGTAAGGAAGCTCGT 59.784 57.895 0.00 0.00 42.52 4.18
3665 4733 0.103208 ATCCAGCGTAAGGAAGCTCG 59.897 55.000 0.00 0.00 42.52 5.03
3666 4734 1.576356 CATCCAGCGTAAGGAAGCTC 58.424 55.000 0.00 0.00 42.52 4.09
3667 4735 0.462759 GCATCCAGCGTAAGGAAGCT 60.463 55.000 11.16 0.00 44.25 3.74
3668 4736 2.017752 GCATCCAGCGTAAGGAAGC 58.982 57.895 4.84 4.84 41.85 3.86
3678 4746 3.795623 ATTGTCTTGAATGCATCCAGC 57.204 42.857 0.00 0.00 45.96 4.85
3679 4747 7.034685 TGATTATTGTCTTGAATGCATCCAG 57.965 36.000 0.00 0.00 0.00 3.86
3680 4748 7.430441 CATGATTATTGTCTTGAATGCATCCA 58.570 34.615 0.00 0.00 0.00 3.41
3681 4749 6.866770 CCATGATTATTGTCTTGAATGCATCC 59.133 38.462 0.00 0.00 0.00 3.51
3682 4750 7.594015 GTCCATGATTATTGTCTTGAATGCATC 59.406 37.037 0.00 0.00 0.00 3.91
3683 4751 7.431249 GTCCATGATTATTGTCTTGAATGCAT 58.569 34.615 0.00 0.00 0.00 3.96
3684 4752 6.183360 GGTCCATGATTATTGTCTTGAATGCA 60.183 38.462 0.00 0.00 0.00 3.96
3685 4753 6.211515 GGTCCATGATTATTGTCTTGAATGC 58.788 40.000 0.00 0.00 0.00 3.56
3686 4754 6.239120 GGGGTCCATGATTATTGTCTTGAATG 60.239 42.308 0.00 0.00 0.00 2.67
3687 4755 5.835280 GGGGTCCATGATTATTGTCTTGAAT 59.165 40.000 0.00 0.00 0.00 2.57
3688 4756 5.044179 AGGGGTCCATGATTATTGTCTTGAA 60.044 40.000 0.00 0.00 0.00 2.69
3689 4757 4.478317 AGGGGTCCATGATTATTGTCTTGA 59.522 41.667 0.00 0.00 0.00 3.02
3690 4758 4.796606 AGGGGTCCATGATTATTGTCTTG 58.203 43.478 0.00 0.00 0.00 3.02
3691 4759 6.786843 ATAGGGGTCCATGATTATTGTCTT 57.213 37.500 0.00 0.00 0.00 3.01
3692 4760 7.025620 ACTATAGGGGTCCATGATTATTGTCT 58.974 38.462 4.43 0.00 0.00 3.41
3693 4761 7.038302 TCACTATAGGGGTCCATGATTATTGTC 60.038 40.741 1.19 0.00 0.00 3.18
3694 4762 6.792473 TCACTATAGGGGTCCATGATTATTGT 59.208 38.462 1.19 0.00 0.00 2.71
3695 4763 7.257790 TCACTATAGGGGTCCATGATTATTG 57.742 40.000 1.19 0.00 0.00 1.90
3696 4764 6.445139 CCTCACTATAGGGGTCCATGATTATT 59.555 42.308 1.19 0.00 32.55 1.40
3697 4765 5.966935 CCTCACTATAGGGGTCCATGATTAT 59.033 44.000 1.19 0.00 32.55 1.28
3698 4766 5.342017 CCTCACTATAGGGGTCCATGATTA 58.658 45.833 1.19 0.00 32.55 1.75
3699 4767 4.171234 CCTCACTATAGGGGTCCATGATT 58.829 47.826 1.19 0.00 32.55 2.57
3700 4768 3.796111 CCTCACTATAGGGGTCCATGAT 58.204 50.000 1.19 0.00 32.55 2.45
3701 4769 3.260269 CCTCACTATAGGGGTCCATGA 57.740 52.381 1.19 0.00 32.55 3.07
3710 4778 1.607628 CGAACGTCCCCTCACTATAGG 59.392 57.143 4.43 0.00 36.30 2.57
3711 4779 2.295885 ACGAACGTCCCCTCACTATAG 58.704 52.381 0.00 0.00 0.00 1.31
3712 4780 2.425143 ACGAACGTCCCCTCACTATA 57.575 50.000 0.00 0.00 0.00 1.31
3713 4781 2.425143 TACGAACGTCCCCTCACTAT 57.575 50.000 2.45 0.00 0.00 2.12
3714 4782 2.425143 ATACGAACGTCCCCTCACTA 57.575 50.000 2.45 0.00 0.00 2.74
3715 4783 1.553706 AATACGAACGTCCCCTCACT 58.446 50.000 2.45 0.00 0.00 3.41
3716 4784 1.997606 CAAATACGAACGTCCCCTCAC 59.002 52.381 2.45 0.00 0.00 3.51
3717 4785 1.673626 GCAAATACGAACGTCCCCTCA 60.674 52.381 2.45 0.00 0.00 3.86
3718 4786 1.004595 GCAAATACGAACGTCCCCTC 58.995 55.000 2.45 0.00 0.00 4.30
3719 4787 0.738412 CGCAAATACGAACGTCCCCT 60.738 55.000 2.45 0.00 34.06 4.79
3720 4788 0.737019 TCGCAAATACGAACGTCCCC 60.737 55.000 2.45 0.00 39.54 4.81
3721 4789 1.070038 TTCGCAAATACGAACGTCCC 58.930 50.000 2.45 0.00 46.39 4.46
3744 4812 4.442375 TCTGACGTTTTTGCAGGAAAAA 57.558 36.364 8.40 8.40 40.52 1.94
3745 4813 4.442375 TTCTGACGTTTTTGCAGGAAAA 57.558 36.364 0.00 0.00 0.00 2.29
3746 4814 4.082463 AGTTTCTGACGTTTTTGCAGGAAA 60.082 37.500 0.00 0.00 29.52 3.13
3747 4815 3.442273 AGTTTCTGACGTTTTTGCAGGAA 59.558 39.130 0.00 0.00 0.00 3.36
3748 4816 3.013921 AGTTTCTGACGTTTTTGCAGGA 58.986 40.909 0.00 0.00 0.00 3.86
3749 4817 3.065371 AGAGTTTCTGACGTTTTTGCAGG 59.935 43.478 0.00 0.00 0.00 4.85
3750 4818 4.278678 AGAGTTTCTGACGTTTTTGCAG 57.721 40.909 0.00 0.00 0.00 4.41
3763 4831 3.244215 TGCCAGAAATCGTCAGAGTTTCT 60.244 43.478 0.00 0.00 41.48 2.52
3764 4832 3.067106 TGCCAGAAATCGTCAGAGTTTC 58.933 45.455 0.00 0.00 34.53 2.78
3765 4833 3.126001 TGCCAGAAATCGTCAGAGTTT 57.874 42.857 0.00 0.00 34.53 2.66
3766 4834 2.839486 TGCCAGAAATCGTCAGAGTT 57.161 45.000 0.00 0.00 37.39 3.01
3767 4835 2.839486 TTGCCAGAAATCGTCAGAGT 57.161 45.000 0.00 0.00 0.00 3.24
3768 4836 2.159599 GCTTTGCCAGAAATCGTCAGAG 60.160 50.000 0.00 0.00 0.00 3.35
3769 4837 1.806542 GCTTTGCCAGAAATCGTCAGA 59.193 47.619 0.00 0.00 0.00 3.27
3770 4838 1.536766 TGCTTTGCCAGAAATCGTCAG 59.463 47.619 0.00 0.00 0.00 3.51
3771 4839 1.603456 TGCTTTGCCAGAAATCGTCA 58.397 45.000 0.00 0.00 0.00 4.35
3772 4840 2.226437 TCTTGCTTTGCCAGAAATCGTC 59.774 45.455 0.00 0.00 27.32 4.20
3773 4841 2.229792 TCTTGCTTTGCCAGAAATCGT 58.770 42.857 0.00 0.00 27.32 3.73
3774 4842 2.995466 TCTTGCTTTGCCAGAAATCG 57.005 45.000 0.00 0.00 27.32 3.34
3775 4843 5.923665 CAAATTCTTGCTTTGCCAGAAATC 58.076 37.500 9.52 0.00 42.13 2.17
3776 4844 5.934935 CAAATTCTTGCTTTGCCAGAAAT 57.065 34.783 9.52 0.24 42.13 2.17
3795 4863 8.694394 GCAAACACAACAAATTTTTAAAGCAAA 58.306 25.926 0.00 0.00 0.00 3.68
3796 4864 8.078596 AGCAAACACAACAAATTTTTAAAGCAA 58.921 25.926 0.00 0.00 0.00 3.91
3797 4865 7.588512 AGCAAACACAACAAATTTTTAAAGCA 58.411 26.923 0.00 0.00 0.00 3.91
3798 4866 8.446489 AAGCAAACACAACAAATTTTTAAAGC 57.554 26.923 0.00 0.00 0.00 3.51
3807 4875 9.771915 CAATTTCTTTAAGCAAACACAACAAAT 57.228 25.926 0.00 0.00 0.00 2.32
3808 4876 7.748241 GCAATTTCTTTAAGCAAACACAACAAA 59.252 29.630 0.00 0.00 0.00 2.83
3809 4877 7.239972 GCAATTTCTTTAAGCAAACACAACAA 58.760 30.769 0.00 0.00 0.00 2.83
3810 4878 6.454848 CGCAATTTCTTTAAGCAAACACAACA 60.455 34.615 0.00 0.00 0.00 3.33
3811 4879 5.895889 CGCAATTTCTTTAAGCAAACACAAC 59.104 36.000 0.00 0.00 0.00 3.32
3812 4880 5.807520 TCGCAATTTCTTTAAGCAAACACAA 59.192 32.000 0.00 0.00 0.00 3.33
3813 4881 5.344066 TCGCAATTTCTTTAAGCAAACACA 58.656 33.333 0.00 0.00 0.00 3.72
3814 4882 5.881637 TCGCAATTTCTTTAAGCAAACAC 57.118 34.783 0.00 0.00 0.00 3.32
3815 4883 5.107530 GCATCGCAATTTCTTTAAGCAAACA 60.108 36.000 0.00 0.00 0.00 2.83
3816 4884 5.119125 AGCATCGCAATTTCTTTAAGCAAAC 59.881 36.000 0.00 0.00 0.00 2.93
3817 4885 5.229423 AGCATCGCAATTTCTTTAAGCAAA 58.771 33.333 0.00 0.00 0.00 3.68
3818 4886 4.808558 AGCATCGCAATTTCTTTAAGCAA 58.191 34.783 0.00 0.00 0.00 3.91
3819 4887 4.156556 AGAGCATCGCAATTTCTTTAAGCA 59.843 37.500 0.00 0.00 42.67 3.91
3820 4888 4.498323 CAGAGCATCGCAATTTCTTTAAGC 59.502 41.667 0.00 0.00 42.67 3.09
3821 4889 5.634896 ACAGAGCATCGCAATTTCTTTAAG 58.365 37.500 0.00 0.00 42.67 1.85
3822 4890 5.627499 ACAGAGCATCGCAATTTCTTTAA 57.373 34.783 0.00 0.00 42.67 1.52
3823 4891 5.641636 TGTACAGAGCATCGCAATTTCTTTA 59.358 36.000 0.00 0.00 42.67 1.85
3824 4892 4.455533 TGTACAGAGCATCGCAATTTCTTT 59.544 37.500 0.00 0.00 42.67 2.52
3825 4893 4.002982 TGTACAGAGCATCGCAATTTCTT 58.997 39.130 0.00 0.00 42.67 2.52
3826 4894 3.599343 TGTACAGAGCATCGCAATTTCT 58.401 40.909 0.00 0.00 42.67 2.52
3827 4895 4.091424 GTTGTACAGAGCATCGCAATTTC 58.909 43.478 0.00 0.00 42.67 2.17
3828 4896 3.501828 TGTTGTACAGAGCATCGCAATTT 59.498 39.130 0.00 0.00 42.67 1.82
3829 4897 3.073678 TGTTGTACAGAGCATCGCAATT 58.926 40.909 0.00 0.00 42.67 2.32
3830 4898 2.698803 TGTTGTACAGAGCATCGCAAT 58.301 42.857 0.00 0.00 42.67 3.56
3831 4899 2.162319 TGTTGTACAGAGCATCGCAA 57.838 45.000 0.00 0.00 42.67 4.85
3832 4900 2.385013 ATGTTGTACAGAGCATCGCA 57.615 45.000 0.00 0.00 42.67 5.10
3833 4901 5.200454 CAATTATGTTGTACAGAGCATCGC 58.800 41.667 11.27 0.00 42.67 4.58
3834 4902 5.200454 GCAATTATGTTGTACAGAGCATCG 58.800 41.667 11.27 3.74 42.67 3.84
3835 4903 5.514279 GGCAATTATGTTGTACAGAGCATC 58.486 41.667 11.27 0.99 0.00 3.91
3836 4904 4.035558 CGGCAATTATGTTGTACAGAGCAT 59.964 41.667 12.19 12.19 0.00 3.79
3837 4905 3.373748 CGGCAATTATGTTGTACAGAGCA 59.626 43.478 0.00 0.00 0.00 4.26
3838 4906 3.374058 ACGGCAATTATGTTGTACAGAGC 59.626 43.478 0.00 0.00 0.00 4.09
3839 4907 4.629634 TCACGGCAATTATGTTGTACAGAG 59.370 41.667 0.00 0.00 0.00 3.35
3840 4908 4.570930 TCACGGCAATTATGTTGTACAGA 58.429 39.130 0.00 0.00 0.00 3.41
3841 4909 4.937696 TCACGGCAATTATGTTGTACAG 57.062 40.909 0.00 0.00 0.00 2.74
3842 4910 5.690997 TTTCACGGCAATTATGTTGTACA 57.309 34.783 0.00 0.00 0.00 2.90
3843 4911 6.398101 CGTTTTTCACGGCAATTATGTTGTAC 60.398 38.462 0.00 0.00 45.89 2.90
3844 4912 5.625721 CGTTTTTCACGGCAATTATGTTGTA 59.374 36.000 0.00 0.00 45.89 2.41
3845 4913 4.442733 CGTTTTTCACGGCAATTATGTTGT 59.557 37.500 0.00 0.00 45.89 3.32
3846 4914 4.928919 CGTTTTTCACGGCAATTATGTTG 58.071 39.130 0.00 0.00 45.89 3.33
3859 4927 3.544285 TGACATTTGCGAACGTTTTTCAC 59.456 39.130 0.46 0.00 0.00 3.18
3860 4928 3.544285 GTGACATTTGCGAACGTTTTTCA 59.456 39.130 0.46 0.00 0.00 2.69
3861 4929 3.789224 AGTGACATTTGCGAACGTTTTTC 59.211 39.130 0.46 0.00 0.00 2.29
3862 4930 3.765026 AGTGACATTTGCGAACGTTTTT 58.235 36.364 0.46 0.00 0.00 1.94
3863 4931 3.359654 GAGTGACATTTGCGAACGTTTT 58.640 40.909 0.46 0.00 0.00 2.43
3864 4932 2.286772 GGAGTGACATTTGCGAACGTTT 60.287 45.455 0.46 0.00 0.00 3.60
3865 4933 1.263217 GGAGTGACATTTGCGAACGTT 59.737 47.619 0.00 0.00 0.00 3.99
3866 4934 0.865769 GGAGTGACATTTGCGAACGT 59.134 50.000 0.00 0.00 0.00 3.99
3867 4935 0.165944 GGGAGTGACATTTGCGAACG 59.834 55.000 0.00 0.00 0.00 3.95
3868 4936 0.521735 GGGGAGTGACATTTGCGAAC 59.478 55.000 0.00 0.00 0.00 3.95
3869 4937 0.608035 GGGGGAGTGACATTTGCGAA 60.608 55.000 0.00 0.00 0.00 4.70
3870 4938 1.002624 GGGGGAGTGACATTTGCGA 60.003 57.895 0.00 0.00 0.00 5.10
3871 4939 1.303236 TGGGGGAGTGACATTTGCG 60.303 57.895 0.00 0.00 0.00 4.85
3872 4940 1.598701 GCTGGGGGAGTGACATTTGC 61.599 60.000 0.00 0.00 0.00 3.68
3873 4941 0.251297 TGCTGGGGGAGTGACATTTG 60.251 55.000 0.00 0.00 0.00 2.32
3874 4942 0.482446 TTGCTGGGGGAGTGACATTT 59.518 50.000 0.00 0.00 0.00 2.32
3875 4943 0.482446 TTTGCTGGGGGAGTGACATT 59.518 50.000 0.00 0.00 0.00 2.71
3876 4944 0.706433 ATTTGCTGGGGGAGTGACAT 59.294 50.000 0.00 0.00 0.00 3.06
3877 4945 0.251297 CATTTGCTGGGGGAGTGACA 60.251 55.000 0.00 0.00 0.00 3.58
3878 4946 0.251341 ACATTTGCTGGGGGAGTGAC 60.251 55.000 0.00 0.00 0.00 3.67
3879 4947 0.482446 AACATTTGCTGGGGGAGTGA 59.518 50.000 0.00 0.00 0.00 3.41
3880 4948 1.001181 CAAACATTTGCTGGGGGAGTG 59.999 52.381 0.00 0.00 0.00 3.51
3881 4949 1.341080 CAAACATTTGCTGGGGGAGT 58.659 50.000 0.00 0.00 0.00 3.85
3901 4969 4.572909 TGATCATCGGGAATGCTATTCAG 58.427 43.478 0.00 5.00 35.17 3.02
3902 4970 4.622260 TGATCATCGGGAATGCTATTCA 57.378 40.909 0.00 0.00 35.17 2.57
3903 4971 6.577103 TCTATGATCATCGGGAATGCTATTC 58.423 40.000 12.53 0.00 35.17 1.75
3904 4972 6.550938 TCTATGATCATCGGGAATGCTATT 57.449 37.500 12.53 0.00 35.17 1.73
3905 4973 6.550938 TTCTATGATCATCGGGAATGCTAT 57.449 37.500 12.53 0.00 35.17 2.97
3906 4974 6.014242 ACTTTCTATGATCATCGGGAATGCTA 60.014 38.462 12.53 0.86 35.17 3.49
3907 4975 4.897509 TTCTATGATCATCGGGAATGCT 57.102 40.909 12.53 0.00 35.17 3.79
3908 4976 4.999950 ACTTTCTATGATCATCGGGAATGC 59.000 41.667 12.53 0.00 35.17 3.56
3909 4977 6.707608 TGAACTTTCTATGATCATCGGGAATG 59.292 38.462 12.53 16.99 36.65 2.67
3910 4978 6.830912 TGAACTTTCTATGATCATCGGGAAT 58.169 36.000 12.53 1.64 0.00 3.01
3911 4979 6.233905 TGAACTTTCTATGATCATCGGGAA 57.766 37.500 12.53 12.14 0.00 3.97
3912 4980 5.869649 TGAACTTTCTATGATCATCGGGA 57.130 39.130 12.53 6.66 0.00 5.14
3913 4981 5.641209 GGATGAACTTTCTATGATCATCGGG 59.359 44.000 12.53 4.29 44.56 5.14
3914 4982 6.226052 TGGATGAACTTTCTATGATCATCGG 58.774 40.000 12.53 6.86 44.56 4.18
3915 4983 7.225341 TGTTGGATGAACTTTCTATGATCATCG 59.775 37.037 12.53 6.13 44.56 3.84
3916 4984 8.442632 TGTTGGATGAACTTTCTATGATCATC 57.557 34.615 12.53 5.69 43.48 2.92
3917 4985 8.812513 TTGTTGGATGAACTTTCTATGATCAT 57.187 30.769 13.81 13.81 35.37 2.45
3918 4986 7.884877 ACTTGTTGGATGAACTTTCTATGATCA 59.115 33.333 0.00 0.00 35.37 2.92
3919 4987 8.273780 ACTTGTTGGATGAACTTTCTATGATC 57.726 34.615 0.00 0.00 35.37 2.92
3920 4988 8.641498 AACTTGTTGGATGAACTTTCTATGAT 57.359 30.769 0.00 0.00 35.37 2.45
3921 4989 7.174946 GGAACTTGTTGGATGAACTTTCTATGA 59.825 37.037 0.00 0.00 35.37 2.15
3922 4990 7.040478 TGGAACTTGTTGGATGAACTTTCTATG 60.040 37.037 0.00 0.00 35.37 2.23
3923 4991 7.004086 TGGAACTTGTTGGATGAACTTTCTAT 58.996 34.615 0.00 0.00 35.37 1.98
3924 4992 6.361433 TGGAACTTGTTGGATGAACTTTCTA 58.639 36.000 0.00 0.00 35.37 2.10
3925 4993 5.200483 TGGAACTTGTTGGATGAACTTTCT 58.800 37.500 0.00 0.00 35.37 2.52
3926 4994 5.514274 TGGAACTTGTTGGATGAACTTTC 57.486 39.130 0.00 0.00 35.37 2.62
3927 4995 5.930837 TTGGAACTTGTTGGATGAACTTT 57.069 34.783 0.00 0.00 35.37 2.66
3928 4996 5.656416 TCTTTGGAACTTGTTGGATGAACTT 59.344 36.000 0.00 0.00 35.37 2.66
3929 4997 5.200483 TCTTTGGAACTTGTTGGATGAACT 58.800 37.500 0.00 0.00 35.37 3.01
3930 4998 5.514274 TCTTTGGAACTTGTTGGATGAAC 57.486 39.130 0.00 0.00 34.84 3.18
3931 4999 6.154363 ACTTTCTTTGGAACTTGTTGGATGAA 59.846 34.615 0.00 0.00 0.00 2.57
3932 5000 5.656416 ACTTTCTTTGGAACTTGTTGGATGA 59.344 36.000 0.00 0.00 0.00 2.92
3933 5001 5.906073 ACTTTCTTTGGAACTTGTTGGATG 58.094 37.500 0.00 0.00 0.00 3.51
3934 5002 6.154363 TGAACTTTCTTTGGAACTTGTTGGAT 59.846 34.615 0.00 0.00 0.00 3.41
3935 5003 5.478679 TGAACTTTCTTTGGAACTTGTTGGA 59.521 36.000 0.00 0.00 0.00 3.53
3936 5004 5.719173 TGAACTTTCTTTGGAACTTGTTGG 58.281 37.500 0.00 0.00 0.00 3.77
3937 5005 6.476706 GGATGAACTTTCTTTGGAACTTGTTG 59.523 38.462 0.00 0.00 0.00 3.33
3938 5006 6.154363 TGGATGAACTTTCTTTGGAACTTGTT 59.846 34.615 0.00 0.00 0.00 2.83
3939 5007 5.656416 TGGATGAACTTTCTTTGGAACTTGT 59.344 36.000 0.00 0.00 0.00 3.16
3940 5008 6.147864 TGGATGAACTTTCTTTGGAACTTG 57.852 37.500 0.00 0.00 0.00 3.16
3941 5009 6.154363 TGTTGGATGAACTTTCTTTGGAACTT 59.846 34.615 0.00 0.00 35.37 2.66
3942 5010 5.656416 TGTTGGATGAACTTTCTTTGGAACT 59.344 36.000 0.00 0.00 35.37 3.01
3943 5011 5.901552 TGTTGGATGAACTTTCTTTGGAAC 58.098 37.500 0.00 0.00 35.37 3.62
3944 5012 6.154363 ACTTGTTGGATGAACTTTCTTTGGAA 59.846 34.615 0.00 0.00 35.37 3.53
3945 5013 5.656416 ACTTGTTGGATGAACTTTCTTTGGA 59.344 36.000 0.00 0.00 35.37 3.53
3946 5014 5.906073 ACTTGTTGGATGAACTTTCTTTGG 58.094 37.500 0.00 0.00 35.37 3.28
3947 5015 7.009540 GTCAACTTGTTGGATGAACTTTCTTTG 59.990 37.037 12.75 0.00 35.37 2.77
3948 5016 7.035612 GTCAACTTGTTGGATGAACTTTCTTT 58.964 34.615 12.75 0.00 35.37 2.52
3949 5017 6.152661 TGTCAACTTGTTGGATGAACTTTCTT 59.847 34.615 12.75 0.00 35.37 2.52
3950 5018 5.652014 TGTCAACTTGTTGGATGAACTTTCT 59.348 36.000 12.75 0.00 35.37 2.52
3951 5019 5.890334 TGTCAACTTGTTGGATGAACTTTC 58.110 37.500 12.75 0.00 35.37 2.62
3952 5020 5.652014 TCTGTCAACTTGTTGGATGAACTTT 59.348 36.000 12.75 0.00 35.37 2.66
3953 5021 5.192927 TCTGTCAACTTGTTGGATGAACTT 58.807 37.500 12.75 0.00 35.37 2.66
3954 5022 4.780815 TCTGTCAACTTGTTGGATGAACT 58.219 39.130 12.75 0.00 35.37 3.01
3955 5023 5.499139 TTCTGTCAACTTGTTGGATGAAC 57.501 39.130 12.75 4.88 34.84 3.18
3956 5024 6.713762 ATTTCTGTCAACTTGTTGGATGAA 57.286 33.333 12.75 10.95 0.00 2.57
3957 5025 7.665145 TGATATTTCTGTCAACTTGTTGGATGA 59.335 33.333 12.75 6.45 0.00 2.92
3958 5026 7.819644 TGATATTTCTGTCAACTTGTTGGATG 58.180 34.615 12.75 4.55 0.00 3.51
3959 5027 8.585471 ATGATATTTCTGTCAACTTGTTGGAT 57.415 30.769 12.75 2.69 0.00 3.41
3960 5028 7.665145 TGATGATATTTCTGTCAACTTGTTGGA 59.335 33.333 12.75 1.15 0.00 3.53
3961 5029 7.819644 TGATGATATTTCTGTCAACTTGTTGG 58.180 34.615 12.75 0.00 0.00 3.77
3962 5030 8.724229 TCTGATGATATTTCTGTCAACTTGTTG 58.276 33.333 7.13 7.13 0.00 3.33
3963 5031 8.853077 TCTGATGATATTTCTGTCAACTTGTT 57.147 30.769 0.00 0.00 0.00 2.83
3972 5040 9.610705 GGCATGTATATCTGATGATATTTCTGT 57.389 33.333 0.00 0.00 41.64 3.41
3973 5041 8.762426 CGGCATGTATATCTGATGATATTTCTG 58.238 37.037 0.00 2.28 41.64 3.02
3974 5042 7.440556 GCGGCATGTATATCTGATGATATTTCT 59.559 37.037 0.00 0.00 41.64 2.52
3975 5043 7.225341 TGCGGCATGTATATCTGATGATATTTC 59.775 37.037 0.00 1.01 41.64 2.17
3976 5044 7.049754 TGCGGCATGTATATCTGATGATATTT 58.950 34.615 0.00 0.00 41.64 1.40
3977 5045 6.585416 TGCGGCATGTATATCTGATGATATT 58.415 36.000 0.00 0.00 41.64 1.28
3978 5046 6.165700 TGCGGCATGTATATCTGATGATAT 57.834 37.500 0.00 4.32 45.09 1.63
3979 5047 5.596836 TGCGGCATGTATATCTGATGATA 57.403 39.130 0.00 0.00 39.25 2.15
3980 5048 4.476628 TGCGGCATGTATATCTGATGAT 57.523 40.909 0.00 0.00 36.74 2.45
3981 5049 3.959535 TGCGGCATGTATATCTGATGA 57.040 42.857 0.00 0.00 0.00 2.92
3982 5050 4.531659 CATGCGGCATGTATATCTGATG 57.468 45.455 29.95 6.13 37.12 3.07
3993 5061 1.031235 TTGGGAATACATGCGGCATG 58.969 50.000 34.64 34.64 46.18 4.06
3994 5062 1.032014 GTTGGGAATACATGCGGCAT 58.968 50.000 10.23 10.23 0.00 4.40
3995 5063 0.034574 AGTTGGGAATACATGCGGCA 60.035 50.000 4.58 4.58 0.00 5.69
3996 5064 1.961793 TAGTTGGGAATACATGCGGC 58.038 50.000 0.00 0.00 0.00 6.53
3997 5065 6.611381 CATTATTAGTTGGGAATACATGCGG 58.389 40.000 0.00 0.00 0.00 5.69
4001 5069 8.995027 TTGAGCATTATTAGTTGGGAATACAT 57.005 30.769 0.00 0.00 0.00 2.29
4004 5072 9.249053 TGTTTTGAGCATTATTAGTTGGGAATA 57.751 29.630 0.00 0.00 0.00 1.75
4013 5081 9.507280 ACGATTGATTGTTTTGAGCATTATTAG 57.493 29.630 0.00 0.00 0.00 1.73
4017 5085 7.962373 CACTACGATTGATTGTTTTGAGCATTA 59.038 33.333 0.00 0.00 0.00 1.90
4019 5087 6.317088 CACTACGATTGATTGTTTTGAGCAT 58.683 36.000 0.00 0.00 0.00 3.79
4029 5097 9.091784 CAATCTATATCCCACTACGATTGATTG 57.908 37.037 0.00 0.00 38.83 2.67
4031 5099 7.633772 GCCAATCTATATCCCACTACGATTGAT 60.634 40.741 9.82 0.00 38.83 2.57
4036 5105 4.219944 GTGCCAATCTATATCCCACTACGA 59.780 45.833 0.00 0.00 0.00 3.43
4037 5106 4.021456 TGTGCCAATCTATATCCCACTACG 60.021 45.833 0.00 0.00 0.00 3.51
4041 5110 4.275936 GTGTTGTGCCAATCTATATCCCAC 59.724 45.833 0.00 0.00 0.00 4.61
4053 5122 1.031235 CATCTGGTGTGTTGTGCCAA 58.969 50.000 0.00 0.00 0.00 4.52
4054 5123 1.454572 GCATCTGGTGTGTTGTGCCA 61.455 55.000 0.00 0.00 0.00 4.92
4056 5125 0.318107 GTGCATCTGGTGTGTTGTGC 60.318 55.000 0.00 0.00 0.00 4.57
4057 5126 0.311790 GGTGCATCTGGTGTGTTGTG 59.688 55.000 0.00 0.00 0.00 3.33
4058 5127 1.165907 CGGTGCATCTGGTGTGTTGT 61.166 55.000 0.00 0.00 0.00 3.32
4075 5146 6.824704 TGTATTAATCCCAGTTTAACCTTCGG 59.175 38.462 0.00 0.00 0.00 4.30
4077 5148 7.338449 TGCTGTATTAATCCCAGTTTAACCTTC 59.662 37.037 13.60 0.00 0.00 3.46
4081 5152 8.451908 AGATGCTGTATTAATCCCAGTTTAAC 57.548 34.615 13.60 0.00 0.00 2.01
4085 5156 6.252599 TGAGATGCTGTATTAATCCCAGTT 57.747 37.500 13.60 5.28 0.00 3.16
4090 5161 5.724328 TCCGATGAGATGCTGTATTAATCC 58.276 41.667 0.00 0.00 0.00 3.01
4106 5177 2.548707 GCTATGCCTTGTGATCCGATGA 60.549 50.000 0.00 0.00 0.00 2.92
4119 5190 2.762969 TTTGGGTGCGTGCTATGCCT 62.763 55.000 0.00 0.00 0.00 4.75
4125 5196 2.109387 TACGTTTGGGTGCGTGCT 59.891 55.556 0.00 0.00 41.68 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.