Multiple sequence alignment - TraesCS1D01G342500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G342500 chr1D 100.000 2812 0 0 1 2812 432200699 432203510 0.000000e+00 5193.0
1 TraesCS1D01G342500 chr1B 87.682 1096 64 38 765 1803 583684325 583685406 0.000000e+00 1210.0
2 TraesCS1D01G342500 chr1B 92.935 552 26 4 2274 2812 583685890 583686441 0.000000e+00 791.0
3 TraesCS1D01G342500 chr1B 86.385 426 41 9 1 417 583683441 583683858 1.540000e-122 449.0
4 TraesCS1D01G342500 chr1B 90.179 112 9 2 2142 2253 583685394 583685503 8.120000e-31 145.0
5 TraesCS1D01G342500 chr1A 88.833 1003 40 26 790 1732 530726017 530727007 0.000000e+00 1166.0
6 TraesCS1D01G342500 chr1A 86.909 550 47 14 2274 2812 530728687 530729222 6.710000e-166 593.0
7 TraesCS1D01G342500 chr1A 89.034 383 30 9 152 527 530725628 530726005 5.490000e-127 464.0
8 TraesCS1D01G342500 chr5D 88.084 814 49 24 1025 1807 80200983 80201779 0.000000e+00 922.0
9 TraesCS1D01G342500 chr5D 88.084 814 49 23 1025 1807 378329147 378329943 0.000000e+00 922.0
10 TraesCS1D01G342500 chr5D 87.961 814 52 23 1025 1807 559441907 559441109 0.000000e+00 918.0
11 TraesCS1D01G342500 chr5D 87.838 814 53 25 1025 1807 296179875 296179077 0.000000e+00 913.0
12 TraesCS1D01G342500 chr5D 91.228 114 6 4 2142 2253 80201764 80201875 4.850000e-33 152.0
13 TraesCS1D01G342500 chr5D 90.598 117 7 4 2142 2256 559441124 559441010 4.850000e-33 152.0
14 TraesCS1D01G342500 chr5D 89.744 117 8 4 2142 2256 296179092 296178978 2.260000e-31 147.0
15 TraesCS1D01G342500 chr5D 90.351 114 7 4 2142 2253 378329928 378330039 2.260000e-31 147.0
16 TraesCS1D01G342500 chr5D 84.127 126 12 3 2274 2391 80202203 80202328 6.370000e-22 115.0
17 TraesCS1D01G342500 chr5D 84.127 126 12 3 2274 2391 296178654 296178529 6.370000e-22 115.0
18 TraesCS1D01G342500 chr5D 84.127 126 12 3 2274 2391 378330365 378330490 6.370000e-22 115.0
19 TraesCS1D01G342500 chr5D 84.127 126 12 3 2274 2391 559440685 559440560 6.370000e-22 115.0
20 TraesCS1D01G342500 chr5D 98.182 55 1 0 2758 2812 296178523 296178469 2.310000e-16 97.1
21 TraesCS1D01G342500 chr5D 98.182 55 1 0 2758 2812 378330496 378330550 2.310000e-16 97.1
22 TraesCS1D01G342500 chr2A 79.974 759 73 49 1063 1766 717819389 717818655 1.170000e-133 486.0
23 TraesCS1D01G342500 chr2A 92.308 234 18 0 533 766 73191750 73191983 1.610000e-87 333.0
24 TraesCS1D01G342500 chr6B 91.983 237 19 0 534 770 25076166 25076402 1.610000e-87 333.0
25 TraesCS1D01G342500 chr5B 91.561 237 20 0 534 770 626497529 626497765 7.510000e-86 327.0
26 TraesCS1D01G342500 chr2D 76.400 750 90 57 1063 1766 579963476 579962768 9.720000e-85 324.0
27 TraesCS1D01G342500 chr4A 83.594 128 14 5 23 149 2394394 2394273 2.290000e-21 113.0
28 TraesCS1D01G342500 chr7D 100.000 28 0 0 1119 1146 96663545 96663518 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G342500 chr1D 432200699 432203510 2811 False 5193.000000 5193 100.000000 1 2812 1 chr1D.!!$F1 2811
1 TraesCS1D01G342500 chr1B 583683441 583686441 3000 False 648.750000 1210 89.295250 1 2812 4 chr1B.!!$F1 2811
2 TraesCS1D01G342500 chr1A 530725628 530729222 3594 False 741.000000 1166 88.258667 152 2812 3 chr1A.!!$F1 2660
3 TraesCS1D01G342500 chr5D 80200983 80202328 1345 False 396.333333 922 87.813000 1025 2391 3 chr5D.!!$F1 1366
4 TraesCS1D01G342500 chr5D 559440560 559441907 1347 True 395.000000 918 87.562000 1025 2391 3 chr5D.!!$R2 1366
5 TraesCS1D01G342500 chr5D 378329147 378330550 1403 False 320.275000 922 90.186000 1025 2812 4 chr5D.!!$F2 1787
6 TraesCS1D01G342500 chr5D 296178469 296179875 1406 True 318.025000 913 89.972750 1025 2812 4 chr5D.!!$R1 1787
7 TraesCS1D01G342500 chr2A 717818655 717819389 734 True 486.000000 486 79.974000 1063 1766 1 chr2A.!!$R1 703
8 TraesCS1D01G342500 chr2D 579962768 579963476 708 True 324.000000 324 76.400000 1063 1766 1 chr2D.!!$R1 703

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
656 1042 0.03831 CACCCCACCTTTCCCTCTTC 59.962 60.0 0.0 0.0 0.0 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2115 3845 0.103208 CGAGCTTCCTTACGCTGGAT 59.897 55.0 0.0 0.0 36.45 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 40 5.284861 TGTTGAGCTTGTTCACCTAGTTA 57.715 39.130 0.00 0.00 0.00 2.24
37 41 5.865085 TGTTGAGCTTGTTCACCTAGTTAT 58.135 37.500 0.00 0.00 0.00 1.89
120 124 0.909623 AGTGACCTATTCAACCCCCG 59.090 55.000 0.00 0.00 35.39 5.73
123 127 2.194868 CCTATTCAACCCCCGCCC 59.805 66.667 0.00 0.00 0.00 6.13
129 133 3.793888 CAACCCCCGCCCCTAGTC 61.794 72.222 0.00 0.00 0.00 2.59
138 142 1.544093 CCGCCCCTAGTCGACTATACA 60.544 57.143 24.85 5.64 0.00 2.29
140 144 2.549563 CGCCCCTAGTCGACTATACAGA 60.550 54.545 24.85 4.47 0.00 3.41
145 149 5.515184 CCCCTAGTCGACTATACAGATCCTT 60.515 48.000 24.85 0.00 0.00 3.36
146 150 5.644636 CCCTAGTCGACTATACAGATCCTTC 59.355 48.000 24.85 0.00 0.00 3.46
147 151 6.231951 CCTAGTCGACTATACAGATCCTTCA 58.768 44.000 24.85 0.19 0.00 3.02
148 152 6.370442 CCTAGTCGACTATACAGATCCTTCAG 59.630 46.154 24.85 10.10 0.00 3.02
149 153 5.931294 AGTCGACTATACAGATCCTTCAGA 58.069 41.667 18.46 0.00 0.00 3.27
150 154 5.995282 AGTCGACTATACAGATCCTTCAGAG 59.005 44.000 18.46 0.00 0.00 3.35
198 203 3.451402 GGAACTCCCAATGGTTTAGGT 57.549 47.619 0.00 0.00 34.14 3.08
227 233 8.392612 GTGTAAGCGTTTAGGAATATTTTAGCA 58.607 33.333 0.00 0.00 0.00 3.49
289 297 9.506018 TGAATTCGGTTATCATGATATGAACAT 57.494 29.630 16.06 12.16 43.50 2.71
366 374 7.682021 GCCTATCATGGTGTTTATTGTCCTTTC 60.682 40.741 0.00 0.00 0.00 2.62
367 375 5.621197 TCATGGTGTTTATTGTCCTTTCG 57.379 39.130 0.00 0.00 0.00 3.46
395 406 2.033065 GCTTCGACATTGCTATGCAGAG 60.033 50.000 3.34 3.34 40.61 3.35
423 808 9.481340 TGATGCTTATGTATCTTAATGTGACTC 57.519 33.333 7.93 0.00 36.47 3.36
449 835 6.177610 TGTTTGTAAGATGGGTAGATTGTCC 58.822 40.000 0.00 0.00 0.00 4.02
451 837 4.283337 TGTAAGATGGGTAGATTGTCCGA 58.717 43.478 0.00 0.00 0.00 4.55
502 888 5.929415 TGACATACTCTTGTTGCGTTGATTA 59.071 36.000 0.00 0.00 0.00 1.75
527 913 8.747538 ATTTTATTACTCCCGTAGCAAAAGAT 57.252 30.769 0.00 0.00 30.49 2.40
533 919 8.882415 TTACTCCCGTAGCAAAAGATAATTAG 57.118 34.615 0.00 0.00 0.00 1.73
535 921 7.210873 ACTCCCGTAGCAAAAGATAATTAGAG 58.789 38.462 0.00 0.00 0.00 2.43
536 922 6.522054 TCCCGTAGCAAAAGATAATTAGAGG 58.478 40.000 0.00 0.00 0.00 3.69
537 923 6.099269 TCCCGTAGCAAAAGATAATTAGAGGT 59.901 38.462 0.00 0.00 0.00 3.85
538 924 6.766467 CCCGTAGCAAAAGATAATTAGAGGTT 59.234 38.462 0.00 0.00 0.00 3.50
539 925 7.254795 CCCGTAGCAAAAGATAATTAGAGGTTG 60.255 40.741 0.00 0.00 0.00 3.77
540 926 7.280205 CCGTAGCAAAAGATAATTAGAGGTTGT 59.720 37.037 0.00 0.00 0.00 3.32
541 927 8.665685 CGTAGCAAAAGATAATTAGAGGTTGTT 58.334 33.333 0.00 0.00 0.00 2.83
544 930 8.306761 AGCAAAAGATAATTAGAGGTTGTTTGG 58.693 33.333 0.00 0.00 0.00 3.28
545 931 8.303876 GCAAAAGATAATTAGAGGTTGTTTGGA 58.696 33.333 0.00 0.00 0.00 3.53
549 935 9.753674 AAGATAATTAGAGGTTGTTTGGATTGA 57.246 29.630 0.00 0.00 0.00 2.57
550 936 9.753674 AGATAATTAGAGGTTGTTTGGATTGAA 57.246 29.630 0.00 0.00 0.00 2.69
552 938 5.705609 TTAGAGGTTGTTTGGATTGAAGC 57.294 39.130 0.00 0.00 0.00 3.86
553 939 2.893489 AGAGGTTGTTTGGATTGAAGCC 59.107 45.455 0.00 0.00 0.00 4.35
554 940 1.970640 AGGTTGTTTGGATTGAAGCCC 59.029 47.619 0.00 0.00 0.00 5.19
555 941 1.001974 GGTTGTTTGGATTGAAGCCCC 59.998 52.381 0.00 0.00 0.00 5.80
556 942 1.001974 GTTGTTTGGATTGAAGCCCCC 59.998 52.381 0.00 0.00 0.00 5.40
557 943 0.897863 TGTTTGGATTGAAGCCCCCG 60.898 55.000 0.00 0.00 0.00 5.73
558 944 0.898326 GTTTGGATTGAAGCCCCCGT 60.898 55.000 0.00 0.00 0.00 5.28
559 945 0.610785 TTTGGATTGAAGCCCCCGTC 60.611 55.000 0.00 0.00 0.00 4.79
560 946 2.124278 GGATTGAAGCCCCCGTCC 60.124 66.667 0.00 0.00 0.00 4.79
561 947 2.513897 GATTGAAGCCCCCGTCCG 60.514 66.667 0.00 0.00 0.00 4.79
562 948 4.796495 ATTGAAGCCCCCGTCCGC 62.796 66.667 0.00 0.00 0.00 5.54
572 958 4.169696 CCGTCCGCCCAGCCAATA 62.170 66.667 0.00 0.00 0.00 1.90
573 959 2.111043 CGTCCGCCCAGCCAATAT 59.889 61.111 0.00 0.00 0.00 1.28
574 960 1.525995 CGTCCGCCCAGCCAATATT 60.526 57.895 0.00 0.00 0.00 1.28
575 961 1.101049 CGTCCGCCCAGCCAATATTT 61.101 55.000 0.00 0.00 0.00 1.40
576 962 1.111277 GTCCGCCCAGCCAATATTTT 58.889 50.000 0.00 0.00 0.00 1.82
577 963 1.110442 TCCGCCCAGCCAATATTTTG 58.890 50.000 0.00 0.00 0.00 2.44
596 982 2.657336 GCATTGACCAAGAATGCGC 58.343 52.632 0.00 0.00 44.52 6.09
597 983 0.109179 GCATTGACCAAGAATGCGCA 60.109 50.000 14.96 14.96 44.52 6.09
598 984 1.669502 GCATTGACCAAGAATGCGCAA 60.670 47.619 17.11 0.00 44.52 4.85
599 985 1.987770 CATTGACCAAGAATGCGCAAC 59.012 47.619 17.11 12.39 0.00 4.17
600 986 1.317613 TTGACCAAGAATGCGCAACT 58.682 45.000 17.11 14.78 0.00 3.16
601 987 0.874390 TGACCAAGAATGCGCAACTC 59.126 50.000 17.11 14.85 0.00 3.01
602 988 0.179215 GACCAAGAATGCGCAACTCG 60.179 55.000 17.11 12.83 42.12 4.18
603 989 0.884704 ACCAAGAATGCGCAACTCGT 60.885 50.000 17.11 10.00 41.07 4.18
604 990 0.238289 CCAAGAATGCGCAACTCGTT 59.762 50.000 17.11 2.66 41.07 3.85
605 991 1.334960 CCAAGAATGCGCAACTCGTTT 60.335 47.619 17.11 1.70 41.07 3.60
606 992 1.710249 CAAGAATGCGCAACTCGTTTG 59.290 47.619 17.11 11.70 41.07 2.93
607 993 0.238289 AGAATGCGCAACTCGTTTGG 59.762 50.000 17.11 0.00 41.07 3.28
608 994 0.237235 GAATGCGCAACTCGTTTGGA 59.763 50.000 17.11 0.00 41.07 3.53
609 995 0.881118 AATGCGCAACTCGTTTGGAT 59.119 45.000 17.11 0.00 41.07 3.41
610 996 0.168788 ATGCGCAACTCGTTTGGATG 59.831 50.000 17.11 0.00 41.07 3.51
611 997 0.882484 TGCGCAACTCGTTTGGATGA 60.882 50.000 8.16 0.00 41.07 2.92
612 998 0.179215 GCGCAACTCGTTTGGATGAG 60.179 55.000 0.30 0.00 43.27 2.90
613 999 0.179215 CGCAACTCGTTTGGATGAGC 60.179 55.000 2.47 0.00 41.70 4.26
614 1000 1.160137 GCAACTCGTTTGGATGAGCT 58.840 50.000 0.00 0.00 41.70 4.09
615 1001 1.129437 GCAACTCGTTTGGATGAGCTC 59.871 52.381 6.82 6.82 41.70 4.09
616 1002 1.734465 CAACTCGTTTGGATGAGCTCC 59.266 52.381 12.15 0.00 41.70 4.70
633 1019 2.266070 CCAATCTTTTGGCTCGCCA 58.734 52.632 6.52 6.52 45.71 5.69
648 1034 4.974721 CCAGCGCACCCCACCTTT 62.975 66.667 11.47 0.00 0.00 3.11
649 1035 3.365265 CAGCGCACCCCACCTTTC 61.365 66.667 11.47 0.00 0.00 2.62
650 1036 4.660938 AGCGCACCCCACCTTTCC 62.661 66.667 11.47 0.00 0.00 3.13
652 1038 3.966543 CGCACCCCACCTTTCCCT 61.967 66.667 0.00 0.00 0.00 4.20
653 1039 2.035783 GCACCCCACCTTTCCCTC 59.964 66.667 0.00 0.00 0.00 4.30
654 1040 2.539081 GCACCCCACCTTTCCCTCT 61.539 63.158 0.00 0.00 0.00 3.69
655 1041 2.081585 GCACCCCACCTTTCCCTCTT 62.082 60.000 0.00 0.00 0.00 2.85
656 1042 0.038310 CACCCCACCTTTCCCTCTTC 59.962 60.000 0.00 0.00 0.00 2.87
657 1043 0.103876 ACCCCACCTTTCCCTCTTCT 60.104 55.000 0.00 0.00 0.00 2.85
658 1044 0.329596 CCCCACCTTTCCCTCTTCTG 59.670 60.000 0.00 0.00 0.00 3.02
659 1045 1.068121 CCCACCTTTCCCTCTTCTGT 58.932 55.000 0.00 0.00 0.00 3.41
660 1046 1.425448 CCCACCTTTCCCTCTTCTGTT 59.575 52.381 0.00 0.00 0.00 3.16
661 1047 2.158460 CCCACCTTTCCCTCTTCTGTTT 60.158 50.000 0.00 0.00 0.00 2.83
662 1048 3.149981 CCACCTTTCCCTCTTCTGTTTC 58.850 50.000 0.00 0.00 0.00 2.78
663 1049 3.181439 CCACCTTTCCCTCTTCTGTTTCT 60.181 47.826 0.00 0.00 0.00 2.52
664 1050 3.817647 CACCTTTCCCTCTTCTGTTTCTG 59.182 47.826 0.00 0.00 0.00 3.02
665 1051 2.816672 CCTTTCCCTCTTCTGTTTCTGC 59.183 50.000 0.00 0.00 0.00 4.26
666 1052 2.169832 TTCCCTCTTCTGTTTCTGCG 57.830 50.000 0.00 0.00 0.00 5.18
667 1053 0.320771 TCCCTCTTCTGTTTCTGCGC 60.321 55.000 0.00 0.00 0.00 6.09
668 1054 1.301677 CCCTCTTCTGTTTCTGCGCC 61.302 60.000 4.18 0.00 0.00 6.53
669 1055 0.603707 CCTCTTCTGTTTCTGCGCCA 60.604 55.000 4.18 0.00 0.00 5.69
670 1056 1.229428 CTCTTCTGTTTCTGCGCCAA 58.771 50.000 4.18 0.00 0.00 4.52
671 1057 0.944386 TCTTCTGTTTCTGCGCCAAC 59.056 50.000 4.18 6.08 0.00 3.77
672 1058 0.384725 CTTCTGTTTCTGCGCCAACG 60.385 55.000 4.18 2.76 44.07 4.10
687 1073 0.860533 CAACGCATTGGCAAAACTGG 59.139 50.000 3.01 0.00 41.24 4.00
688 1074 0.249826 AACGCATTGGCAAAACTGGG 60.250 50.000 3.01 9.40 41.24 4.45
689 1075 1.374505 CGCATTGGCAAAACTGGGG 60.375 57.895 3.01 0.00 41.24 4.96
690 1076 1.672030 GCATTGGCAAAACTGGGGC 60.672 57.895 3.01 0.00 40.72 5.80
691 1077 1.374505 CATTGGCAAAACTGGGGCG 60.375 57.895 3.01 0.00 0.00 6.13
692 1078 2.582493 ATTGGCAAAACTGGGGCGG 61.582 57.895 3.01 0.00 0.00 6.13
697 1083 4.589675 AAAACTGGGGCGGCCGAA 62.590 61.111 33.48 12.03 0.00 4.30
698 1084 3.879180 AAAACTGGGGCGGCCGAAT 62.879 57.895 33.48 4.59 0.00 3.34
699 1085 4.796495 AACTGGGGCGGCCGAATC 62.796 66.667 33.48 17.28 0.00 2.52
711 1097 3.202001 CGAATCGGCCGCCAACAT 61.202 61.111 23.51 5.11 0.00 2.71
712 1098 2.760159 CGAATCGGCCGCCAACATT 61.760 57.895 23.51 15.06 0.00 2.71
713 1099 1.510844 GAATCGGCCGCCAACATTT 59.489 52.632 23.51 4.73 0.00 2.32
714 1100 0.108851 GAATCGGCCGCCAACATTTT 60.109 50.000 23.51 3.22 0.00 1.82
715 1101 0.389687 AATCGGCCGCCAACATTTTG 60.390 50.000 23.51 0.00 0.00 2.44
722 1108 3.949855 CCAACATTTTGGCGTGCC 58.050 55.556 3.30 3.30 46.09 5.01
723 1109 1.667510 CCAACATTTTGGCGTGCCC 60.668 57.895 8.69 0.00 46.09 5.36
724 1110 1.068753 CAACATTTTGGCGTGCCCA 59.931 52.632 8.69 0.00 43.51 5.36
725 1111 1.068921 AACATTTTGGCGTGCCCAC 59.931 52.632 8.69 0.00 45.34 4.61
726 1112 1.680522 AACATTTTGGCGTGCCCACA 61.681 50.000 8.69 0.00 45.34 4.17
727 1113 1.068753 CATTTTGGCGTGCCCACAA 59.931 52.632 8.69 0.00 45.34 3.33
728 1114 0.320596 CATTTTGGCGTGCCCACAAT 60.321 50.000 8.69 1.16 45.34 2.71
729 1115 0.320596 ATTTTGGCGTGCCCACAATG 60.321 50.000 8.69 0.00 45.34 2.82
730 1116 2.985512 TTTTGGCGTGCCCACAATGC 62.986 55.000 8.69 0.00 45.34 3.56
734 1120 4.054825 CGTGCCCACAATGCCCAC 62.055 66.667 0.00 0.00 0.00 4.61
735 1121 4.054825 GTGCCCACAATGCCCACG 62.055 66.667 0.00 0.00 0.00 4.94
736 1122 4.277009 TGCCCACAATGCCCACGA 62.277 61.111 0.00 0.00 0.00 4.35
737 1123 2.755469 GCCCACAATGCCCACGAT 60.755 61.111 0.00 0.00 0.00 3.73
738 1124 2.350458 GCCCACAATGCCCACGATT 61.350 57.895 0.00 0.00 0.00 3.34
739 1125 1.887344 GCCCACAATGCCCACGATTT 61.887 55.000 0.00 0.00 0.00 2.17
740 1126 0.108709 CCCACAATGCCCACGATTTG 60.109 55.000 0.00 0.00 0.00 2.32
741 1127 0.108709 CCACAATGCCCACGATTTGG 60.109 55.000 0.00 0.00 46.47 3.28
742 1128 0.737019 CACAATGCCCACGATTTGGC 60.737 55.000 0.00 0.00 45.37 4.52
764 1150 3.827634 CGCTCCTGGGCATAAACC 58.172 61.111 7.72 0.00 0.00 3.27
765 1151 1.077787 CGCTCCTGGGCATAAACCA 60.078 57.895 7.72 0.00 36.38 3.67
766 1152 0.679640 CGCTCCTGGGCATAAACCAA 60.680 55.000 7.72 0.00 37.59 3.67
767 1153 1.555967 GCTCCTGGGCATAAACCAAA 58.444 50.000 0.00 0.00 37.59 3.28
768 1154 1.204704 GCTCCTGGGCATAAACCAAAC 59.795 52.381 0.00 0.00 37.59 2.93
769 1155 2.524306 CTCCTGGGCATAAACCAAACA 58.476 47.619 0.00 0.00 37.59 2.83
770 1156 2.493278 CTCCTGGGCATAAACCAAACAG 59.507 50.000 0.00 0.00 37.59 3.16
771 1157 2.109128 TCCTGGGCATAAACCAAACAGA 59.891 45.455 0.00 0.00 37.59 3.41
772 1158 2.231235 CCTGGGCATAAACCAAACAGAC 59.769 50.000 0.00 0.00 37.59 3.51
773 1159 2.231235 CTGGGCATAAACCAAACAGACC 59.769 50.000 0.00 0.00 37.59 3.85
774 1160 1.548719 GGGCATAAACCAAACAGACCC 59.451 52.381 0.00 0.00 0.00 4.46
775 1161 2.525368 GGCATAAACCAAACAGACCCT 58.475 47.619 0.00 0.00 0.00 4.34
776 1162 2.897326 GGCATAAACCAAACAGACCCTT 59.103 45.455 0.00 0.00 0.00 3.95
777 1163 4.083565 GGCATAAACCAAACAGACCCTTA 58.916 43.478 0.00 0.00 0.00 2.69
834 1224 1.891919 GTGCACCGGTCATGTGTGT 60.892 57.895 2.59 0.00 36.11 3.72
835 1225 1.891449 TGCACCGGTCATGTGTGTG 60.891 57.895 2.59 0.00 36.11 3.82
836 1226 2.616330 GCACCGGTCATGTGTGTGG 61.616 63.158 2.59 0.00 36.11 4.17
855 1245 1.069090 GGCAACGGGCGATAGATGA 59.931 57.895 0.00 0.00 46.16 2.92
975 1377 1.105167 GCCCGCACCTTATAAACCCC 61.105 60.000 0.00 0.00 0.00 4.95
976 1378 0.816421 CCCGCACCTTATAAACCCCG 60.816 60.000 0.00 0.00 0.00 5.73
1069 1473 2.408565 GGGGAGAGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
1611 2120 6.350612 GGTTCTGTCTACTGCTTCTTCTGTAT 60.351 42.308 0.00 0.00 0.00 2.29
1613 2122 5.946377 TCTGTCTACTGCTTCTTCTGTATCA 59.054 40.000 0.00 0.00 0.00 2.15
1674 2215 2.109387 TACGTTTGGGTGCGTGCT 59.891 55.556 0.00 0.00 41.68 4.40
1693 2234 2.548707 GCTATGCCTTGTGATCCGATGA 60.549 50.000 0.00 0.00 0.00 2.92
1709 2262 5.724328 TCCGATGAGATGCTGTATTAATCC 58.276 41.667 0.00 0.00 0.00 3.01
1722 2275 7.338449 TGCTGTATTAATCCCAGTTTAACCTTC 59.662 37.037 13.60 0.00 0.00 3.46
1724 2277 6.824704 TGTATTAATCCCAGTTTAACCTTCGG 59.175 38.462 0.00 0.00 0.00 4.30
1741 3028 1.165907 CGGTGCATCTGGTGTGTTGT 61.166 55.000 0.00 0.00 0.00 3.32
1758 3487 4.275936 GTGTTGTGCCAATCTATATCCCAC 59.724 45.833 0.00 0.00 0.00 4.61
1768 3498 7.633772 GCCAATCTATATCCCACTACGATTGAT 60.634 40.741 9.82 0.00 38.83 2.57
1770 3500 9.091784 CAATCTATATCCCACTACGATTGATTG 57.908 37.037 0.00 0.00 38.83 2.67
1780 3510 6.317088 CACTACGATTGATTGTTTTGAGCAT 58.683 36.000 0.00 0.00 0.00 3.79
1795 3525 9.249053 TGTTTTGAGCATTATTAGTTGGGAATA 57.751 29.630 0.00 0.00 0.00 1.75
1798 3528 8.995027 TTGAGCATTATTAGTTGGGAATACAT 57.005 30.769 0.00 0.00 0.00 2.29
1802 3532 6.611381 CATTATTAGTTGGGAATACATGCGG 58.389 40.000 0.00 0.00 0.00 5.69
1803 3533 1.961793 TAGTTGGGAATACATGCGGC 58.038 50.000 0.00 0.00 0.00 6.53
1804 3534 0.034574 AGTTGGGAATACATGCGGCA 60.035 50.000 4.58 4.58 0.00 5.69
1805 3535 1.032014 GTTGGGAATACATGCGGCAT 58.968 50.000 10.23 10.23 0.00 4.40
1806 3536 1.031235 TTGGGAATACATGCGGCATG 58.969 50.000 34.64 34.64 46.18 4.06
1817 3547 4.531659 CATGCGGCATGTATATCTGATG 57.468 45.455 29.95 6.13 37.12 3.07
1818 3548 3.959535 TGCGGCATGTATATCTGATGA 57.040 42.857 0.00 0.00 0.00 2.92
1819 3549 4.476628 TGCGGCATGTATATCTGATGAT 57.523 40.909 0.00 0.00 36.74 2.45
1820 3550 5.596836 TGCGGCATGTATATCTGATGATA 57.403 39.130 0.00 0.00 39.25 2.15
1821 3551 6.165700 TGCGGCATGTATATCTGATGATAT 57.834 37.500 0.00 4.32 45.09 1.63
1822 3552 6.585416 TGCGGCATGTATATCTGATGATATT 58.415 36.000 0.00 0.00 41.64 1.28
1823 3553 7.049754 TGCGGCATGTATATCTGATGATATTT 58.950 34.615 0.00 0.00 41.64 1.40
1824 3554 7.225341 TGCGGCATGTATATCTGATGATATTTC 59.775 37.037 0.00 1.01 41.64 2.17
1825 3555 7.440556 GCGGCATGTATATCTGATGATATTTCT 59.559 37.037 0.00 0.00 41.64 2.52
1826 3556 8.762426 CGGCATGTATATCTGATGATATTTCTG 58.238 37.037 0.00 2.28 41.64 3.02
1827 3557 9.610705 GGCATGTATATCTGATGATATTTCTGT 57.389 33.333 0.00 0.00 41.64 3.41
1836 3566 8.853077 TCTGATGATATTTCTGTCAACTTGTT 57.147 30.769 0.00 0.00 0.00 2.83
1837 3567 8.724229 TCTGATGATATTTCTGTCAACTTGTTG 58.276 33.333 7.13 7.13 0.00 3.33
1838 3568 7.819644 TGATGATATTTCTGTCAACTTGTTGG 58.180 34.615 12.75 0.00 0.00 3.77
1839 3569 7.665145 TGATGATATTTCTGTCAACTTGTTGGA 59.335 33.333 12.75 1.15 0.00 3.53
1840 3570 8.585471 ATGATATTTCTGTCAACTTGTTGGAT 57.415 30.769 12.75 2.69 0.00 3.41
1841 3571 7.819644 TGATATTTCTGTCAACTTGTTGGATG 58.180 34.615 12.75 4.55 0.00 3.51
1842 3572 7.665145 TGATATTTCTGTCAACTTGTTGGATGA 59.335 33.333 12.75 6.45 0.00 2.92
1843 3573 6.713762 ATTTCTGTCAACTTGTTGGATGAA 57.286 33.333 12.75 10.95 0.00 2.57
1844 3574 5.499139 TTCTGTCAACTTGTTGGATGAAC 57.501 39.130 12.75 4.88 34.84 3.18
1845 3575 4.780815 TCTGTCAACTTGTTGGATGAACT 58.219 39.130 12.75 0.00 35.37 3.01
1846 3576 5.192927 TCTGTCAACTTGTTGGATGAACTT 58.807 37.500 12.75 0.00 35.37 2.66
1847 3577 5.652014 TCTGTCAACTTGTTGGATGAACTTT 59.348 36.000 12.75 0.00 35.37 2.66
1848 3578 5.890334 TGTCAACTTGTTGGATGAACTTTC 58.110 37.500 12.75 0.00 35.37 2.62
1849 3579 5.652014 TGTCAACTTGTTGGATGAACTTTCT 59.348 36.000 12.75 0.00 35.37 2.52
1850 3580 6.152661 TGTCAACTTGTTGGATGAACTTTCTT 59.847 34.615 12.75 0.00 35.37 2.52
1851 3581 7.035612 GTCAACTTGTTGGATGAACTTTCTTT 58.964 34.615 12.75 0.00 35.37 2.52
1852 3582 7.009540 GTCAACTTGTTGGATGAACTTTCTTTG 59.990 37.037 12.75 0.00 35.37 2.77
1853 3583 5.906073 ACTTGTTGGATGAACTTTCTTTGG 58.094 37.500 0.00 0.00 35.37 3.28
1854 3584 5.656416 ACTTGTTGGATGAACTTTCTTTGGA 59.344 36.000 0.00 0.00 35.37 3.53
1855 3585 6.154363 ACTTGTTGGATGAACTTTCTTTGGAA 59.846 34.615 0.00 0.00 35.37 3.53
1856 3586 5.901552 TGTTGGATGAACTTTCTTTGGAAC 58.098 37.500 0.00 0.00 35.37 3.62
1857 3587 5.656416 TGTTGGATGAACTTTCTTTGGAACT 59.344 36.000 0.00 0.00 35.37 3.01
1858 3588 6.154363 TGTTGGATGAACTTTCTTTGGAACTT 59.846 34.615 0.00 0.00 35.37 2.66
1859 3589 6.147864 TGGATGAACTTTCTTTGGAACTTG 57.852 37.500 0.00 0.00 0.00 3.16
1860 3590 5.656416 TGGATGAACTTTCTTTGGAACTTGT 59.344 36.000 0.00 0.00 0.00 3.16
1861 3591 6.154363 TGGATGAACTTTCTTTGGAACTTGTT 59.846 34.615 0.00 0.00 0.00 2.83
1862 3592 6.476706 GGATGAACTTTCTTTGGAACTTGTTG 59.523 38.462 0.00 0.00 0.00 3.33
1863 3593 5.719173 TGAACTTTCTTTGGAACTTGTTGG 58.281 37.500 0.00 0.00 0.00 3.77
1864 3594 5.478679 TGAACTTTCTTTGGAACTTGTTGGA 59.521 36.000 0.00 0.00 0.00 3.53
1865 3595 6.154363 TGAACTTTCTTTGGAACTTGTTGGAT 59.846 34.615 0.00 0.00 0.00 3.41
1866 3596 5.906073 ACTTTCTTTGGAACTTGTTGGATG 58.094 37.500 0.00 0.00 0.00 3.51
1867 3597 5.656416 ACTTTCTTTGGAACTTGTTGGATGA 59.344 36.000 0.00 0.00 0.00 2.92
1868 3598 6.154363 ACTTTCTTTGGAACTTGTTGGATGAA 59.846 34.615 0.00 0.00 0.00 2.57
1869 3599 5.514274 TCTTTGGAACTTGTTGGATGAAC 57.486 39.130 0.00 0.00 34.84 3.18
1870 3600 5.200483 TCTTTGGAACTTGTTGGATGAACT 58.800 37.500 0.00 0.00 35.37 3.01
1871 3601 5.656416 TCTTTGGAACTTGTTGGATGAACTT 59.344 36.000 0.00 0.00 35.37 2.66
1872 3602 5.930837 TTGGAACTTGTTGGATGAACTTT 57.069 34.783 0.00 0.00 35.37 2.66
1873 3603 5.514274 TGGAACTTGTTGGATGAACTTTC 57.486 39.130 0.00 0.00 35.37 2.62
1874 3604 5.200483 TGGAACTTGTTGGATGAACTTTCT 58.800 37.500 0.00 0.00 35.37 2.52
1875 3605 6.361433 TGGAACTTGTTGGATGAACTTTCTA 58.639 36.000 0.00 0.00 35.37 2.10
1876 3606 7.004086 TGGAACTTGTTGGATGAACTTTCTAT 58.996 34.615 0.00 0.00 35.37 1.98
1877 3607 7.040478 TGGAACTTGTTGGATGAACTTTCTATG 60.040 37.037 0.00 0.00 35.37 2.23
1878 3608 7.174946 GGAACTTGTTGGATGAACTTTCTATGA 59.825 37.037 0.00 0.00 35.37 2.15
1879 3609 8.641498 AACTTGTTGGATGAACTTTCTATGAT 57.359 30.769 0.00 0.00 35.37 2.45
1880 3610 8.273780 ACTTGTTGGATGAACTTTCTATGATC 57.726 34.615 0.00 0.00 35.37 2.92
1881 3611 7.884877 ACTTGTTGGATGAACTTTCTATGATCA 59.115 33.333 0.00 0.00 35.37 2.92
1882 3612 8.812513 TTGTTGGATGAACTTTCTATGATCAT 57.187 30.769 13.81 13.81 35.37 2.45
1883 3613 8.442632 TGTTGGATGAACTTTCTATGATCATC 57.557 34.615 12.53 5.69 43.48 2.92
1884 3614 7.225341 TGTTGGATGAACTTTCTATGATCATCG 59.775 37.037 12.53 6.13 44.56 3.84
1885 3615 6.226052 TGGATGAACTTTCTATGATCATCGG 58.774 40.000 12.53 6.86 44.56 4.18
1886 3616 5.641209 GGATGAACTTTCTATGATCATCGGG 59.359 44.000 12.53 4.29 44.56 5.14
1887 3617 5.869649 TGAACTTTCTATGATCATCGGGA 57.130 39.130 12.53 6.66 0.00 5.14
1888 3618 6.233905 TGAACTTTCTATGATCATCGGGAA 57.766 37.500 12.53 12.14 0.00 3.97
1889 3619 6.830912 TGAACTTTCTATGATCATCGGGAAT 58.169 36.000 12.53 1.64 0.00 3.01
1890 3620 6.707608 TGAACTTTCTATGATCATCGGGAATG 59.292 38.462 12.53 16.99 36.65 2.67
1891 3621 4.999950 ACTTTCTATGATCATCGGGAATGC 59.000 41.667 12.53 0.00 35.17 3.56
1892 3622 4.897509 TTCTATGATCATCGGGAATGCT 57.102 40.909 12.53 0.00 35.17 3.79
1893 3623 6.014242 ACTTTCTATGATCATCGGGAATGCTA 60.014 38.462 12.53 0.86 35.17 3.49
1894 3624 6.550938 TTCTATGATCATCGGGAATGCTAT 57.449 37.500 12.53 0.00 35.17 2.97
1895 3625 6.550938 TCTATGATCATCGGGAATGCTATT 57.449 37.500 12.53 0.00 35.17 1.73
1896 3626 6.577103 TCTATGATCATCGGGAATGCTATTC 58.423 40.000 12.53 0.00 35.17 1.75
1897 3627 4.622260 TGATCATCGGGAATGCTATTCA 57.378 40.909 0.00 0.00 35.17 2.57
1898 3628 4.572909 TGATCATCGGGAATGCTATTCAG 58.427 43.478 0.00 5.00 35.17 3.02
1918 3648 1.341080 CAAACATTTGCTGGGGGAGT 58.659 50.000 0.00 0.00 0.00 3.85
1919 3649 1.001181 CAAACATTTGCTGGGGGAGTG 59.999 52.381 0.00 0.00 0.00 3.51
1920 3650 0.482446 AACATTTGCTGGGGGAGTGA 59.518 50.000 0.00 0.00 0.00 3.41
1921 3651 0.251341 ACATTTGCTGGGGGAGTGAC 60.251 55.000 0.00 0.00 0.00 3.67
1922 3652 0.251297 CATTTGCTGGGGGAGTGACA 60.251 55.000 0.00 0.00 0.00 3.58
1923 3653 0.706433 ATTTGCTGGGGGAGTGACAT 59.294 50.000 0.00 0.00 0.00 3.06
1924 3654 0.482446 TTTGCTGGGGGAGTGACATT 59.518 50.000 0.00 0.00 0.00 2.71
1925 3655 0.482446 TTGCTGGGGGAGTGACATTT 59.518 50.000 0.00 0.00 0.00 2.32
1926 3656 0.251297 TGCTGGGGGAGTGACATTTG 60.251 55.000 0.00 0.00 0.00 2.32
1927 3657 1.598701 GCTGGGGGAGTGACATTTGC 61.599 60.000 0.00 0.00 0.00 3.68
1928 3658 1.303236 TGGGGGAGTGACATTTGCG 60.303 57.895 0.00 0.00 0.00 4.85
1929 3659 1.002624 GGGGGAGTGACATTTGCGA 60.003 57.895 0.00 0.00 0.00 5.10
1930 3660 0.608035 GGGGGAGTGACATTTGCGAA 60.608 55.000 0.00 0.00 0.00 4.70
1931 3661 0.521735 GGGGAGTGACATTTGCGAAC 59.478 55.000 0.00 0.00 0.00 3.95
1932 3662 0.165944 GGGAGTGACATTTGCGAACG 59.834 55.000 0.00 0.00 0.00 3.95
1933 3663 0.865769 GGAGTGACATTTGCGAACGT 59.134 50.000 0.00 0.00 0.00 3.99
1934 3664 1.263217 GGAGTGACATTTGCGAACGTT 59.737 47.619 0.00 0.00 0.00 3.99
1935 3665 2.286772 GGAGTGACATTTGCGAACGTTT 60.287 45.455 0.46 0.00 0.00 3.60
1936 3666 3.359654 GAGTGACATTTGCGAACGTTTT 58.640 40.909 0.46 0.00 0.00 2.43
1937 3667 3.765026 AGTGACATTTGCGAACGTTTTT 58.235 36.364 0.46 0.00 0.00 1.94
1938 3668 3.789224 AGTGACATTTGCGAACGTTTTTC 59.211 39.130 0.46 0.00 0.00 2.29
1939 3669 3.544285 GTGACATTTGCGAACGTTTTTCA 59.456 39.130 0.46 0.00 0.00 2.69
1940 3670 3.544285 TGACATTTGCGAACGTTTTTCAC 59.456 39.130 0.46 0.00 0.00 3.18
1953 3683 4.928919 CGTTTTTCACGGCAATTATGTTG 58.071 39.130 0.00 0.00 45.89 3.33
1954 3684 4.442733 CGTTTTTCACGGCAATTATGTTGT 59.557 37.500 0.00 0.00 45.89 3.32
1955 3685 5.625721 CGTTTTTCACGGCAATTATGTTGTA 59.374 36.000 0.00 0.00 45.89 2.41
1956 3686 6.398101 CGTTTTTCACGGCAATTATGTTGTAC 60.398 38.462 0.00 0.00 45.89 2.90
1957 3687 5.690997 TTTCACGGCAATTATGTTGTACA 57.309 34.783 0.00 0.00 0.00 2.90
1958 3688 4.937696 TCACGGCAATTATGTTGTACAG 57.062 40.909 0.00 0.00 0.00 2.74
1959 3689 4.570930 TCACGGCAATTATGTTGTACAGA 58.429 39.130 0.00 0.00 0.00 3.41
1960 3690 4.629634 TCACGGCAATTATGTTGTACAGAG 59.370 41.667 0.00 0.00 0.00 3.35
1961 3691 3.374058 ACGGCAATTATGTTGTACAGAGC 59.626 43.478 0.00 0.00 0.00 4.09
1962 3692 3.373748 CGGCAATTATGTTGTACAGAGCA 59.626 43.478 0.00 0.00 0.00 4.26
1963 3693 4.035558 CGGCAATTATGTTGTACAGAGCAT 59.964 41.667 12.19 12.19 0.00 3.79
1964 3694 5.514279 GGCAATTATGTTGTACAGAGCATC 58.486 41.667 11.27 0.99 0.00 3.91
1965 3695 5.200454 GCAATTATGTTGTACAGAGCATCG 58.800 41.667 11.27 3.74 42.67 3.84
1966 3696 5.200454 CAATTATGTTGTACAGAGCATCGC 58.800 41.667 11.27 0.00 42.67 4.58
1967 3697 2.385013 ATGTTGTACAGAGCATCGCA 57.615 45.000 0.00 0.00 42.67 5.10
1968 3698 2.162319 TGTTGTACAGAGCATCGCAA 57.838 45.000 0.00 0.00 42.67 4.85
1969 3699 2.698803 TGTTGTACAGAGCATCGCAAT 58.301 42.857 0.00 0.00 42.67 3.56
1970 3700 3.073678 TGTTGTACAGAGCATCGCAATT 58.926 40.909 0.00 0.00 42.67 2.32
1971 3701 3.501828 TGTTGTACAGAGCATCGCAATTT 59.498 39.130 0.00 0.00 42.67 1.82
1972 3702 4.091424 GTTGTACAGAGCATCGCAATTTC 58.909 43.478 0.00 0.00 42.67 2.17
1973 3703 3.599343 TGTACAGAGCATCGCAATTTCT 58.401 40.909 0.00 0.00 42.67 2.52
1974 3704 4.002982 TGTACAGAGCATCGCAATTTCTT 58.997 39.130 0.00 0.00 42.67 2.52
1975 3705 4.455533 TGTACAGAGCATCGCAATTTCTTT 59.544 37.500 0.00 0.00 42.67 2.52
1976 3706 5.641636 TGTACAGAGCATCGCAATTTCTTTA 59.358 36.000 0.00 0.00 42.67 1.85
1977 3707 5.627499 ACAGAGCATCGCAATTTCTTTAA 57.373 34.783 0.00 0.00 42.67 1.52
1978 3708 5.634896 ACAGAGCATCGCAATTTCTTTAAG 58.365 37.500 0.00 0.00 42.67 1.85
1979 3709 4.498323 CAGAGCATCGCAATTTCTTTAAGC 59.502 41.667 0.00 0.00 42.67 3.09
1980 3710 4.156556 AGAGCATCGCAATTTCTTTAAGCA 59.843 37.500 0.00 0.00 42.67 3.91
1981 3711 4.808558 AGCATCGCAATTTCTTTAAGCAA 58.191 34.783 0.00 0.00 0.00 3.91
1982 3712 5.229423 AGCATCGCAATTTCTTTAAGCAAA 58.771 33.333 0.00 0.00 0.00 3.68
1983 3713 5.119125 AGCATCGCAATTTCTTTAAGCAAAC 59.881 36.000 0.00 0.00 0.00 2.93
1984 3714 5.107530 GCATCGCAATTTCTTTAAGCAAACA 60.108 36.000 0.00 0.00 0.00 2.83
1985 3715 5.881637 TCGCAATTTCTTTAAGCAAACAC 57.118 34.783 0.00 0.00 0.00 3.32
1986 3716 5.344066 TCGCAATTTCTTTAAGCAAACACA 58.656 33.333 0.00 0.00 0.00 3.72
1987 3717 5.807520 TCGCAATTTCTTTAAGCAAACACAA 59.192 32.000 0.00 0.00 0.00 3.33
1988 3718 5.895889 CGCAATTTCTTTAAGCAAACACAAC 59.104 36.000 0.00 0.00 0.00 3.32
1989 3719 6.454848 CGCAATTTCTTTAAGCAAACACAACA 60.455 34.615 0.00 0.00 0.00 3.33
1990 3720 7.239972 GCAATTTCTTTAAGCAAACACAACAA 58.760 30.769 0.00 0.00 0.00 2.83
1991 3721 7.748241 GCAATTTCTTTAAGCAAACACAACAAA 59.252 29.630 0.00 0.00 0.00 2.83
1992 3722 9.771915 CAATTTCTTTAAGCAAACACAACAAAT 57.228 25.926 0.00 0.00 0.00 2.32
2001 3731 8.446489 AAGCAAACACAACAAATTTTTAAAGC 57.554 26.923 0.00 0.00 0.00 3.51
2002 3732 7.588512 AGCAAACACAACAAATTTTTAAAGCA 58.411 26.923 0.00 0.00 0.00 3.91
2003 3733 8.078596 AGCAAACACAACAAATTTTTAAAGCAA 58.921 25.926 0.00 0.00 0.00 3.91
2004 3734 8.694394 GCAAACACAACAAATTTTTAAAGCAAA 58.306 25.926 0.00 0.00 0.00 3.68
2023 3753 5.934935 CAAATTCTTGCTTTGCCAGAAAT 57.065 34.783 9.52 0.24 42.13 2.17
2024 3754 5.923665 CAAATTCTTGCTTTGCCAGAAATC 58.076 37.500 9.52 0.00 42.13 2.17
2025 3755 2.995466 TCTTGCTTTGCCAGAAATCG 57.005 45.000 0.00 0.00 27.32 3.34
2026 3756 2.229792 TCTTGCTTTGCCAGAAATCGT 58.770 42.857 0.00 0.00 27.32 3.73
2027 3757 2.226437 TCTTGCTTTGCCAGAAATCGTC 59.774 45.455 0.00 0.00 27.32 4.20
2028 3758 1.603456 TGCTTTGCCAGAAATCGTCA 58.397 45.000 0.00 0.00 0.00 4.35
2029 3759 1.536766 TGCTTTGCCAGAAATCGTCAG 59.463 47.619 0.00 0.00 0.00 3.51
2030 3760 1.806542 GCTTTGCCAGAAATCGTCAGA 59.193 47.619 0.00 0.00 0.00 3.27
2031 3761 2.159599 GCTTTGCCAGAAATCGTCAGAG 60.160 50.000 0.00 0.00 0.00 3.35
2032 3762 2.839486 TTGCCAGAAATCGTCAGAGT 57.161 45.000 0.00 0.00 0.00 3.24
2033 3763 2.839486 TGCCAGAAATCGTCAGAGTT 57.161 45.000 0.00 0.00 37.39 3.01
2034 3764 3.126001 TGCCAGAAATCGTCAGAGTTT 57.874 42.857 0.00 0.00 34.53 2.66
2035 3765 3.067106 TGCCAGAAATCGTCAGAGTTTC 58.933 45.455 0.00 0.00 34.53 2.78
2036 3766 3.244215 TGCCAGAAATCGTCAGAGTTTCT 60.244 43.478 0.00 0.00 41.48 2.52
2049 3779 4.278678 AGAGTTTCTGACGTTTTTGCAG 57.721 40.909 0.00 0.00 0.00 4.41
2050 3780 3.065371 AGAGTTTCTGACGTTTTTGCAGG 59.935 43.478 0.00 0.00 0.00 4.85
2051 3781 3.013921 AGTTTCTGACGTTTTTGCAGGA 58.986 40.909 0.00 0.00 0.00 3.86
2052 3782 3.442273 AGTTTCTGACGTTTTTGCAGGAA 59.558 39.130 0.00 0.00 0.00 3.36
2053 3783 4.082463 AGTTTCTGACGTTTTTGCAGGAAA 60.082 37.500 0.00 0.00 29.52 3.13
2054 3784 4.442375 TTCTGACGTTTTTGCAGGAAAA 57.558 36.364 0.00 0.00 0.00 2.29
2055 3785 4.442375 TCTGACGTTTTTGCAGGAAAAA 57.558 36.364 8.40 8.40 40.52 1.94
2078 3808 1.070038 TTCGCAAATACGAACGTCCC 58.930 50.000 2.45 0.00 46.39 4.46
2079 3809 0.737019 TCGCAAATACGAACGTCCCC 60.737 55.000 2.45 0.00 39.54 4.81
2080 3810 0.738412 CGCAAATACGAACGTCCCCT 60.738 55.000 2.45 0.00 34.06 4.79
2081 3811 1.004595 GCAAATACGAACGTCCCCTC 58.995 55.000 2.45 0.00 0.00 4.30
2082 3812 1.673626 GCAAATACGAACGTCCCCTCA 60.674 52.381 2.45 0.00 0.00 3.86
2083 3813 1.997606 CAAATACGAACGTCCCCTCAC 59.002 52.381 2.45 0.00 0.00 3.51
2084 3814 1.553706 AATACGAACGTCCCCTCACT 58.446 50.000 2.45 0.00 0.00 3.41
2085 3815 2.425143 ATACGAACGTCCCCTCACTA 57.575 50.000 2.45 0.00 0.00 2.74
2086 3816 2.425143 TACGAACGTCCCCTCACTAT 57.575 50.000 2.45 0.00 0.00 2.12
2087 3817 2.425143 ACGAACGTCCCCTCACTATA 57.575 50.000 0.00 0.00 0.00 1.31
2088 3818 2.295885 ACGAACGTCCCCTCACTATAG 58.704 52.381 0.00 0.00 0.00 1.31
2089 3819 1.607628 CGAACGTCCCCTCACTATAGG 59.392 57.143 4.43 0.00 36.30 2.57
2098 3828 3.260269 CCTCACTATAGGGGTCCATGA 57.740 52.381 1.19 0.00 32.55 3.07
2099 3829 3.796111 CCTCACTATAGGGGTCCATGAT 58.204 50.000 1.19 0.00 32.55 2.45
2100 3830 4.171234 CCTCACTATAGGGGTCCATGATT 58.829 47.826 1.19 0.00 32.55 2.57
2101 3831 5.342017 CCTCACTATAGGGGTCCATGATTA 58.658 45.833 1.19 0.00 32.55 1.75
2102 3832 5.966935 CCTCACTATAGGGGTCCATGATTAT 59.033 44.000 1.19 0.00 32.55 1.28
2103 3833 6.445139 CCTCACTATAGGGGTCCATGATTATT 59.555 42.308 1.19 0.00 32.55 1.40
2104 3834 7.257790 TCACTATAGGGGTCCATGATTATTG 57.742 40.000 1.19 0.00 0.00 1.90
2105 3835 6.792473 TCACTATAGGGGTCCATGATTATTGT 59.208 38.462 1.19 0.00 0.00 2.71
2106 3836 7.038302 TCACTATAGGGGTCCATGATTATTGTC 60.038 40.741 1.19 0.00 0.00 3.18
2107 3837 7.025620 ACTATAGGGGTCCATGATTATTGTCT 58.974 38.462 4.43 0.00 0.00 3.41
2108 3838 6.786843 ATAGGGGTCCATGATTATTGTCTT 57.213 37.500 0.00 0.00 0.00 3.01
2109 3839 4.796606 AGGGGTCCATGATTATTGTCTTG 58.203 43.478 0.00 0.00 0.00 3.02
2110 3840 4.478317 AGGGGTCCATGATTATTGTCTTGA 59.522 41.667 0.00 0.00 0.00 3.02
2111 3841 5.044179 AGGGGTCCATGATTATTGTCTTGAA 60.044 40.000 0.00 0.00 0.00 2.69
2112 3842 5.835280 GGGGTCCATGATTATTGTCTTGAAT 59.165 40.000 0.00 0.00 0.00 2.57
2113 3843 6.239120 GGGGTCCATGATTATTGTCTTGAATG 60.239 42.308 0.00 0.00 0.00 2.67
2114 3844 6.211515 GGTCCATGATTATTGTCTTGAATGC 58.788 40.000 0.00 0.00 0.00 3.56
2115 3845 6.183360 GGTCCATGATTATTGTCTTGAATGCA 60.183 38.462 0.00 0.00 0.00 3.96
2116 3846 7.431249 GTCCATGATTATTGTCTTGAATGCAT 58.569 34.615 0.00 0.00 0.00 3.96
2117 3847 7.594015 GTCCATGATTATTGTCTTGAATGCATC 59.406 37.037 0.00 0.00 0.00 3.91
2118 3848 6.866770 CCATGATTATTGTCTTGAATGCATCC 59.133 38.462 0.00 0.00 0.00 3.51
2119 3849 7.430441 CATGATTATTGTCTTGAATGCATCCA 58.570 34.615 0.00 0.00 0.00 3.41
2120 3850 7.034685 TGATTATTGTCTTGAATGCATCCAG 57.965 36.000 0.00 0.00 0.00 3.86
2121 3851 3.795623 ATTGTCTTGAATGCATCCAGC 57.204 42.857 0.00 0.00 45.96 4.85
2131 3861 2.017752 GCATCCAGCGTAAGGAAGC 58.982 57.895 4.84 4.84 41.85 3.86
2132 3862 0.462759 GCATCCAGCGTAAGGAAGCT 60.463 55.000 11.16 0.00 44.25 3.74
2133 3863 1.576356 CATCCAGCGTAAGGAAGCTC 58.424 55.000 0.00 0.00 42.52 4.09
2134 3864 0.103208 ATCCAGCGTAAGGAAGCTCG 59.897 55.000 0.00 0.00 42.52 5.03
2135 3865 1.215647 CCAGCGTAAGGAAGCTCGT 59.784 57.895 0.00 0.00 42.52 4.18
2136 3866 0.802607 CCAGCGTAAGGAAGCTCGTC 60.803 60.000 0.00 0.00 42.52 4.20
2137 3867 0.171455 CAGCGTAAGGAAGCTCGTCT 59.829 55.000 0.00 0.00 42.52 4.18
2138 3868 0.452585 AGCGTAAGGAAGCTCGTCTC 59.547 55.000 0.00 0.00 39.98 3.36
2139 3869 0.525882 GCGTAAGGAAGCTCGTCTCC 60.526 60.000 0.00 0.00 38.28 3.71
2140 3870 0.809385 CGTAAGGAAGCTCGTCTCCA 59.191 55.000 5.00 0.00 0.00 3.86
2141 3871 1.202200 CGTAAGGAAGCTCGTCTCCAG 60.202 57.143 5.00 0.00 0.00 3.86
2142 3872 1.135333 GTAAGGAAGCTCGTCTCCAGG 59.865 57.143 5.00 0.00 0.00 4.45
2143 3873 0.251832 AAGGAAGCTCGTCTCCAGGA 60.252 55.000 5.00 0.00 0.00 3.86
2144 3874 0.251832 AGGAAGCTCGTCTCCAGGAA 60.252 55.000 5.00 0.00 0.00 3.36
2145 3875 0.827368 GGAAGCTCGTCTCCAGGAAT 59.173 55.000 0.00 0.00 0.00 3.01
2146 3876 1.472376 GGAAGCTCGTCTCCAGGAATG 60.472 57.143 0.00 0.00 0.00 2.67
2147 3877 0.107945 AAGCTCGTCTCCAGGAATGC 60.108 55.000 0.00 0.00 0.00 3.56
2148 3878 1.219124 GCTCGTCTCCAGGAATGCA 59.781 57.895 0.00 0.00 0.00 3.96
2149 3879 1.086634 GCTCGTCTCCAGGAATGCAC 61.087 60.000 0.00 0.00 0.00 4.57
2150 3880 0.803768 CTCGTCTCCAGGAATGCACG 60.804 60.000 0.00 0.00 0.00 5.34
2151 3881 2.456119 CGTCTCCAGGAATGCACGC 61.456 63.158 0.00 0.00 0.00 5.34
2152 3882 2.109126 GTCTCCAGGAATGCACGCC 61.109 63.158 0.00 0.00 0.00 5.68
2211 3944 7.603180 ATTACTGCACTCTAGATCCAATACA 57.397 36.000 0.00 0.00 0.00 2.29
2216 3949 5.105513 TGCACTCTAGATCCAATACAAACGA 60.106 40.000 0.00 0.00 0.00 3.85
2218 3951 6.480320 GCACTCTAGATCCAATACAAACGATT 59.520 38.462 0.00 0.00 0.00 3.34
2244 3977 8.314143 TCAAATCAAATCAGAAGAAAAATGCC 57.686 30.769 0.00 0.00 0.00 4.40
2260 3993 5.699097 AAATGCCGTTTTCTGTTAAGCTA 57.301 34.783 0.00 0.00 0.00 3.32
2262 3995 5.897377 ATGCCGTTTTCTGTTAAGCTAAT 57.103 34.783 0.00 0.00 0.00 1.73
2264 3997 5.457140 TGCCGTTTTCTGTTAAGCTAATTG 58.543 37.500 0.00 0.00 0.00 2.32
2265 3998 5.009210 TGCCGTTTTCTGTTAAGCTAATTGT 59.991 36.000 0.00 0.00 0.00 2.71
2266 3999 5.918576 GCCGTTTTCTGTTAAGCTAATTGTT 59.081 36.000 0.00 0.00 0.00 2.83
2267 4000 6.129194 GCCGTTTTCTGTTAAGCTAATTGTTG 60.129 38.462 0.00 0.00 0.00 3.33
2340 4443 9.775854 AAATACATATTGAGATCTCAGGTTCAG 57.224 33.333 23.92 15.37 41.13 3.02
2359 4470 4.152647 TCAGCCTTCGTATAGGTCATGAT 58.847 43.478 0.00 0.00 37.63 2.45
2362 4473 5.184096 CAGCCTTCGTATAGGTCATGATAGT 59.816 44.000 0.00 0.00 37.63 2.12
2372 4483 2.224305 GGTCATGATAGTACCCACCAGC 60.224 54.545 0.00 0.00 0.00 4.85
2386 4497 2.033299 CCACCAGCACACAAAGTTACAG 59.967 50.000 0.00 0.00 0.00 2.74
2430 4541 7.201266 GCAGATCATAACATGAACGTGAAAAAC 60.201 37.037 0.00 0.00 43.50 2.43
2475 4587 9.500785 ACATCACCAAAGAAAAGAAAAGAAAAA 57.499 25.926 0.00 0.00 0.00 1.94
2478 4595 9.717942 TCACCAAAGAAAAGAAAAGAAAAATCA 57.282 25.926 0.00 0.00 0.00 2.57
2557 4674 0.467106 CACAACCACATCCACCACCA 60.467 55.000 0.00 0.00 0.00 4.17
2597 4714 6.823689 ACATAACAGATTTGACATGGTAGGTC 59.176 38.462 0.00 0.00 25.34 3.85
2598 4715 5.505181 AACAGATTTGACATGGTAGGTCT 57.495 39.130 0.00 0.00 36.26 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.022416 TGAACAAGCTCAACAACAACAACT 60.022 37.500 0.00 0.00 0.00 3.16
14 18 3.838244 ACTAGGTGAACAAGCTCAACA 57.162 42.857 0.00 0.00 35.33 3.33
15 19 9.765795 ATATATAACTAGGTGAACAAGCTCAAC 57.234 33.333 0.00 0.00 37.85 3.18
17 21 9.368416 AGATATATAACTAGGTGAACAAGCTCA 57.632 33.333 0.00 0.00 37.85 4.26
57 61 6.872920 TGACAAACTTTAGGCTCAACAAAAT 58.127 32.000 0.00 0.00 0.00 1.82
104 108 1.153025 GGCGGGGGTTGAATAGGTC 60.153 63.158 0.00 0.00 0.00 3.85
105 109 2.686572 GGGCGGGGGTTGAATAGGT 61.687 63.158 0.00 0.00 0.00 3.08
120 124 3.137446 TCTGTATAGTCGACTAGGGGC 57.863 52.381 27.81 17.75 0.00 5.80
123 127 6.231951 TGAAGGATCTGTATAGTCGACTAGG 58.768 44.000 27.81 17.69 0.00 3.02
129 133 6.261158 TGAACTCTGAAGGATCTGTATAGTCG 59.739 42.308 0.00 0.00 0.00 4.18
132 136 7.502226 AGTCTGAACTCTGAAGGATCTGTATAG 59.498 40.741 0.00 0.00 0.00 1.31
138 142 6.432403 AAAAGTCTGAACTCTGAAGGATCT 57.568 37.500 0.00 0.00 33.48 2.75
140 144 9.579932 AATTAAAAAGTCTGAACTCTGAAGGAT 57.420 29.630 0.00 0.00 33.48 3.24
145 149 9.342308 ACATCAATTAAAAAGTCTGAACTCTGA 57.658 29.630 0.00 0.00 33.48 3.27
146 150 9.956720 AACATCAATTAAAAAGTCTGAACTCTG 57.043 29.630 0.00 0.00 33.48 3.35
188 193 4.139038 ACGCTTACACAAACCTAAACCAT 58.861 39.130 0.00 0.00 0.00 3.55
191 196 6.018016 TCCTAAACGCTTACACAAACCTAAAC 60.018 38.462 0.00 0.00 0.00 2.01
196 201 4.816786 TTCCTAAACGCTTACACAAACC 57.183 40.909 0.00 0.00 0.00 3.27
366 374 1.321016 CAATGTCGAAGCAAAGCACG 58.679 50.000 0.00 0.00 33.74 5.34
367 375 1.055338 GCAATGTCGAAGCAAAGCAC 58.945 50.000 0.00 0.00 0.00 4.40
395 406 9.869844 GTCACATTAAGATACATAAGCATCAAC 57.130 33.333 0.00 0.00 0.00 3.18
423 808 7.201732 GGACAATCTACCCATCTTACAAACATG 60.202 40.741 0.00 0.00 0.00 3.21
449 835 3.255725 ACACGGTGTTATGTGGTTATCG 58.744 45.455 8.21 0.00 40.39 2.92
451 837 6.394025 AAAAACACGGTGTTATGTGGTTAT 57.606 33.333 25.31 5.17 44.78 1.89
477 863 4.314961 TCAACGCAACAAGAGTATGTCAT 58.685 39.130 0.00 0.00 31.81 3.06
478 864 3.723260 TCAACGCAACAAGAGTATGTCA 58.277 40.909 0.00 0.00 31.81 3.58
479 865 4.928661 ATCAACGCAACAAGAGTATGTC 57.071 40.909 0.00 0.00 31.81 3.06
480 866 6.985188 ATAATCAACGCAACAAGAGTATGT 57.015 33.333 0.00 0.00 34.24 2.29
481 867 8.673626 AAAATAATCAACGCAACAAGAGTATG 57.326 30.769 0.00 0.00 0.00 2.39
502 888 8.747538 ATCTTTTGCTACGGGAGTAATAAAAT 57.252 30.769 0.00 0.00 46.10 1.82
527 913 7.093945 GGCTTCAATCCAAACAACCTCTAATTA 60.094 37.037 0.00 0.00 0.00 1.40
533 919 2.029020 GGGCTTCAATCCAAACAACCTC 60.029 50.000 0.00 0.00 0.00 3.85
535 921 1.001974 GGGGCTTCAATCCAAACAACC 59.998 52.381 0.00 0.00 0.00 3.77
536 922 1.001974 GGGGGCTTCAATCCAAACAAC 59.998 52.381 0.00 0.00 0.00 3.32
537 923 1.347062 GGGGGCTTCAATCCAAACAA 58.653 50.000 0.00 0.00 0.00 2.83
538 924 0.897863 CGGGGGCTTCAATCCAAACA 60.898 55.000 0.00 0.00 0.00 2.83
539 925 0.898326 ACGGGGGCTTCAATCCAAAC 60.898 55.000 0.00 0.00 0.00 2.93
540 926 0.610785 GACGGGGGCTTCAATCCAAA 60.611 55.000 0.00 0.00 0.00 3.28
541 927 1.001393 GACGGGGGCTTCAATCCAA 60.001 57.895 0.00 0.00 0.00 3.53
542 928 2.674754 GACGGGGGCTTCAATCCA 59.325 61.111 0.00 0.00 0.00 3.41
543 929 2.124278 GGACGGGGGCTTCAATCC 60.124 66.667 0.00 0.00 0.00 3.01
544 930 2.513897 CGGACGGGGGCTTCAATC 60.514 66.667 0.00 0.00 0.00 2.67
545 931 4.796495 GCGGACGGGGGCTTCAAT 62.796 66.667 0.00 0.00 0.00 2.57
555 941 2.958578 AATATTGGCTGGGCGGACGG 62.959 60.000 0.00 0.00 0.00 4.79
556 942 1.101049 AAATATTGGCTGGGCGGACG 61.101 55.000 0.00 0.00 0.00 4.79
557 943 1.111277 AAAATATTGGCTGGGCGGAC 58.889 50.000 0.00 0.00 0.00 4.79
558 944 1.110442 CAAAATATTGGCTGGGCGGA 58.890 50.000 0.00 0.00 32.69 5.54
559 945 3.665544 CAAAATATTGGCTGGGCGG 57.334 52.632 0.00 0.00 32.69 6.13
568 954 7.690228 CATTCTTGGTCAATGCCAAAATATTG 58.310 34.615 9.65 0.00 46.59 1.90
569 955 7.852971 CATTCTTGGTCAATGCCAAAATATT 57.147 32.000 9.65 0.00 46.59 1.28
579 965 1.987770 GTTGCGCATTCTTGGTCAATG 59.012 47.619 12.75 0.00 34.80 2.82
580 966 1.888512 AGTTGCGCATTCTTGGTCAAT 59.111 42.857 12.75 0.00 0.00 2.57
581 967 1.266718 GAGTTGCGCATTCTTGGTCAA 59.733 47.619 12.75 0.00 0.00 3.18
582 968 0.874390 GAGTTGCGCATTCTTGGTCA 59.126 50.000 12.75 0.00 0.00 4.02
583 969 0.179215 CGAGTTGCGCATTCTTGGTC 60.179 55.000 12.75 0.68 0.00 4.02
584 970 0.884704 ACGAGTTGCGCATTCTTGGT 60.885 50.000 24.38 18.03 46.04 3.67
585 971 0.238289 AACGAGTTGCGCATTCTTGG 59.762 50.000 24.38 17.58 46.04 3.61
586 972 1.710249 CAAACGAGTTGCGCATTCTTG 59.290 47.619 12.75 18.54 46.04 3.02
587 973 1.334960 CCAAACGAGTTGCGCATTCTT 60.335 47.619 12.75 2.95 46.04 2.52
588 974 0.238289 CCAAACGAGTTGCGCATTCT 59.762 50.000 12.75 13.53 46.04 2.40
589 975 0.237235 TCCAAACGAGTTGCGCATTC 59.763 50.000 12.75 11.81 46.04 2.67
590 976 0.881118 ATCCAAACGAGTTGCGCATT 59.119 45.000 12.75 1.80 46.04 3.56
591 977 0.168788 CATCCAAACGAGTTGCGCAT 59.831 50.000 12.75 0.00 46.04 4.73
592 978 0.882484 TCATCCAAACGAGTTGCGCA 60.882 50.000 5.66 5.66 46.04 6.09
593 979 0.179215 CTCATCCAAACGAGTTGCGC 60.179 55.000 0.00 0.00 46.04 6.09
595 981 1.129437 GAGCTCATCCAAACGAGTTGC 59.871 52.381 9.40 0.00 35.74 4.17
616 1002 0.457337 GCTGGCGAGCCAAAAGATTG 60.457 55.000 18.19 5.64 46.63 2.67
617 1003 1.885871 GCTGGCGAGCCAAAAGATT 59.114 52.632 18.19 0.00 46.63 2.40
618 1004 2.401766 CGCTGGCGAGCCAAAAGAT 61.402 57.895 18.19 0.00 46.63 2.40
619 1005 3.049674 CGCTGGCGAGCCAAAAGA 61.050 61.111 18.19 0.00 46.63 2.52
620 1006 4.766088 GCGCTGGCGAGCCAAAAG 62.766 66.667 18.19 12.47 46.63 2.27
631 1017 4.974721 AAAGGTGGGGTGCGCTGG 62.975 66.667 9.73 0.00 0.00 4.85
632 1018 3.365265 GAAAGGTGGGGTGCGCTG 61.365 66.667 9.73 0.00 0.00 5.18
633 1019 4.660938 GGAAAGGTGGGGTGCGCT 62.661 66.667 9.73 0.00 0.00 5.92
635 1021 3.920093 GAGGGAAAGGTGGGGTGCG 62.920 68.421 0.00 0.00 0.00 5.34
636 1022 2.035783 GAGGGAAAGGTGGGGTGC 59.964 66.667 0.00 0.00 0.00 5.01
637 1023 0.038310 GAAGAGGGAAAGGTGGGGTG 59.962 60.000 0.00 0.00 0.00 4.61
638 1024 0.103876 AGAAGAGGGAAAGGTGGGGT 60.104 55.000 0.00 0.00 0.00 4.95
639 1025 0.329596 CAGAAGAGGGAAAGGTGGGG 59.670 60.000 0.00 0.00 0.00 4.96
640 1026 1.068121 ACAGAAGAGGGAAAGGTGGG 58.932 55.000 0.00 0.00 0.00 4.61
641 1027 2.959465 AACAGAAGAGGGAAAGGTGG 57.041 50.000 0.00 0.00 0.00 4.61
642 1028 3.817647 CAGAAACAGAAGAGGGAAAGGTG 59.182 47.826 0.00 0.00 0.00 4.00
643 1029 3.748989 GCAGAAACAGAAGAGGGAAAGGT 60.749 47.826 0.00 0.00 0.00 3.50
644 1030 2.816672 GCAGAAACAGAAGAGGGAAAGG 59.183 50.000 0.00 0.00 0.00 3.11
645 1031 2.481952 CGCAGAAACAGAAGAGGGAAAG 59.518 50.000 0.00 0.00 0.00 2.62
646 1032 2.494059 CGCAGAAACAGAAGAGGGAAA 58.506 47.619 0.00 0.00 0.00 3.13
647 1033 1.878102 GCGCAGAAACAGAAGAGGGAA 60.878 52.381 0.30 0.00 0.00 3.97
648 1034 0.320771 GCGCAGAAACAGAAGAGGGA 60.321 55.000 0.30 0.00 0.00 4.20
649 1035 1.301677 GGCGCAGAAACAGAAGAGGG 61.302 60.000 10.83 0.00 0.00 4.30
650 1036 0.603707 TGGCGCAGAAACAGAAGAGG 60.604 55.000 10.83 0.00 0.00 3.69
651 1037 1.069636 GTTGGCGCAGAAACAGAAGAG 60.070 52.381 10.83 0.00 0.00 2.85
652 1038 0.944386 GTTGGCGCAGAAACAGAAGA 59.056 50.000 10.83 0.00 0.00 2.87
653 1039 0.384725 CGTTGGCGCAGAAACAGAAG 60.385 55.000 10.83 0.00 0.00 2.85
654 1040 1.646540 CGTTGGCGCAGAAACAGAA 59.353 52.632 10.83 0.00 0.00 3.02
655 1041 3.329231 CGTTGGCGCAGAAACAGA 58.671 55.556 10.83 0.00 0.00 3.41
668 1054 0.860533 CCAGTTTTGCCAATGCGTTG 59.139 50.000 11.90 11.90 41.78 4.10
669 1055 0.249826 CCCAGTTTTGCCAATGCGTT 60.250 50.000 0.00 0.00 41.78 4.84
670 1056 1.367102 CCCAGTTTTGCCAATGCGT 59.633 52.632 0.00 0.00 41.78 5.24
671 1057 1.374505 CCCCAGTTTTGCCAATGCG 60.375 57.895 0.00 0.00 41.78 4.73
672 1058 1.672030 GCCCCAGTTTTGCCAATGC 60.672 57.895 0.00 0.00 38.26 3.56
673 1059 1.374505 CGCCCCAGTTTTGCCAATG 60.375 57.895 0.00 0.00 0.00 2.82
674 1060 2.582493 CCGCCCCAGTTTTGCCAAT 61.582 57.895 0.00 0.00 0.00 3.16
675 1061 3.230245 CCGCCCCAGTTTTGCCAA 61.230 61.111 0.00 0.00 0.00 4.52
680 1066 3.879180 ATTCGGCCGCCCCAGTTTT 62.879 57.895 23.51 0.00 0.00 2.43
681 1067 4.360405 ATTCGGCCGCCCCAGTTT 62.360 61.111 23.51 0.00 0.00 2.66
682 1068 4.796495 GATTCGGCCGCCCCAGTT 62.796 66.667 23.51 0.00 0.00 3.16
694 1080 2.265073 AAATGTTGGCGGCCGATTCG 62.265 55.000 33.48 0.95 0.00 3.34
695 1081 0.108851 AAAATGTTGGCGGCCGATTC 60.109 50.000 33.48 17.95 0.00 2.52
696 1082 0.389687 CAAAATGTTGGCGGCCGATT 60.390 50.000 33.48 16.82 0.00 3.34
697 1083 1.215117 CAAAATGTTGGCGGCCGAT 59.785 52.632 33.48 10.48 0.00 4.18
698 1084 2.647875 CAAAATGTTGGCGGCCGA 59.352 55.556 33.48 10.26 0.00 5.54
706 1092 1.068753 TGGGCACGCCAAAATGTTG 59.931 52.632 10.83 0.00 37.98 3.33
707 1093 1.068921 GTGGGCACGCCAAAATGTT 59.931 52.632 10.83 0.00 37.98 2.71
708 1094 1.680522 TTGTGGGCACGCCAAAATGT 61.681 50.000 10.83 0.00 37.98 2.71
709 1095 0.320596 ATTGTGGGCACGCCAAAATG 60.321 50.000 10.83 0.00 37.98 2.32
710 1096 0.320596 CATTGTGGGCACGCCAAAAT 60.321 50.000 10.83 3.54 37.98 1.82
711 1097 1.068753 CATTGTGGGCACGCCAAAA 59.931 52.632 10.83 1.13 37.98 2.44
712 1098 2.733301 CATTGTGGGCACGCCAAA 59.267 55.556 10.83 1.50 37.98 3.28
713 1099 3.988525 GCATTGTGGGCACGCCAA 61.989 61.111 10.83 0.00 37.98 4.52
717 1103 4.054825 GTGGGCATTGTGGGCACG 62.055 66.667 0.00 0.00 37.53 5.34
718 1104 4.054825 CGTGGGCATTGTGGGCAC 62.055 66.667 0.00 0.00 34.51 5.01
719 1105 3.582242 ATCGTGGGCATTGTGGGCA 62.582 57.895 0.00 0.00 34.52 5.36
720 1106 1.887344 AAATCGTGGGCATTGTGGGC 61.887 55.000 0.00 0.00 0.00 5.36
721 1107 0.108709 CAAATCGTGGGCATTGTGGG 60.109 55.000 0.00 0.00 0.00 4.61
722 1108 0.108709 CCAAATCGTGGGCATTGTGG 60.109 55.000 0.00 0.00 44.64 4.17
723 1109 3.422122 CCAAATCGTGGGCATTGTG 57.578 52.632 0.00 0.00 44.64 3.33
743 1129 3.697439 TTATGCCCAGGAGCGCCAC 62.697 63.158 9.88 0.00 36.29 5.01
744 1130 2.977718 TTTATGCCCAGGAGCGCCA 61.978 57.895 9.88 0.00 36.29 5.69
745 1131 2.124320 TTTATGCCCAGGAGCGCC 60.124 61.111 2.29 0.00 34.65 6.53
746 1132 2.481471 GGTTTATGCCCAGGAGCGC 61.481 63.158 0.00 0.00 34.65 5.92
747 1133 0.679640 TTGGTTTATGCCCAGGAGCG 60.680 55.000 0.00 0.00 32.49 5.03
748 1134 1.204704 GTTTGGTTTATGCCCAGGAGC 59.795 52.381 0.00 0.00 32.49 4.70
749 1135 2.493278 CTGTTTGGTTTATGCCCAGGAG 59.507 50.000 0.00 0.00 32.49 3.69
750 1136 2.109128 TCTGTTTGGTTTATGCCCAGGA 59.891 45.455 0.00 0.00 32.49 3.86
751 1137 2.231235 GTCTGTTTGGTTTATGCCCAGG 59.769 50.000 0.00 0.00 32.49 4.45
752 1138 2.231235 GGTCTGTTTGGTTTATGCCCAG 59.769 50.000 0.00 0.00 32.49 4.45
753 1139 2.243810 GGTCTGTTTGGTTTATGCCCA 58.756 47.619 0.00 0.00 0.00 5.36
754 1140 1.548719 GGGTCTGTTTGGTTTATGCCC 59.451 52.381 0.00 0.00 0.00 5.36
755 1141 2.525368 AGGGTCTGTTTGGTTTATGCC 58.475 47.619 0.00 0.00 0.00 4.40
756 1142 5.914898 ATAAGGGTCTGTTTGGTTTATGC 57.085 39.130 0.00 0.00 0.00 3.14
757 1143 7.227049 ACAATAAGGGTCTGTTTGGTTTATG 57.773 36.000 0.00 0.00 0.00 1.90
758 1144 7.849322 AACAATAAGGGTCTGTTTGGTTTAT 57.151 32.000 0.00 0.00 28.99 1.40
759 1145 7.663043 AAACAATAAGGGTCTGTTTGGTTTA 57.337 32.000 0.00 0.00 40.74 2.01
760 1146 6.553953 AAACAATAAGGGTCTGTTTGGTTT 57.446 33.333 0.00 0.00 40.74 3.27
761 1147 7.507616 TCATAAACAATAAGGGTCTGTTTGGTT 59.492 33.333 9.13 0.00 41.91 3.67
762 1148 7.007723 TCATAAACAATAAGGGTCTGTTTGGT 58.992 34.615 9.13 0.00 41.91 3.67
763 1149 7.040062 TGTCATAAACAATAAGGGTCTGTTTGG 60.040 37.037 9.13 3.03 41.91 3.28
764 1150 7.881142 TGTCATAAACAATAAGGGTCTGTTTG 58.119 34.615 9.13 0.00 41.91 2.93
765 1151 8.472007 TTGTCATAAACAATAAGGGTCTGTTT 57.528 30.769 4.95 4.95 42.95 2.83
766 1152 8.472007 TTTGTCATAAACAATAAGGGTCTGTT 57.528 30.769 0.00 0.00 46.94 3.16
767 1153 8.472007 TTTTGTCATAAACAATAAGGGTCTGT 57.528 30.769 0.00 0.00 46.94 3.41
768 1154 8.792633 TCTTTTGTCATAAACAATAAGGGTCTG 58.207 33.333 0.00 0.00 46.94 3.51
769 1155 8.934023 TCTTTTGTCATAAACAATAAGGGTCT 57.066 30.769 0.00 0.00 46.94 3.85
770 1156 9.974980 TTTCTTTTGTCATAAACAATAAGGGTC 57.025 29.630 0.00 0.00 46.94 4.46
790 1176 5.701224 TGGGTCCAGAACTGTATTTTCTTT 58.299 37.500 1.18 0.00 30.56 2.52
793 1179 4.083484 CGTTGGGTCCAGAACTGTATTTTC 60.083 45.833 1.18 0.00 0.00 2.29
798 1184 1.069513 CACGTTGGGTCCAGAACTGTA 59.930 52.381 0.00 0.00 0.00 2.74
799 1185 0.179056 CACGTTGGGTCCAGAACTGT 60.179 55.000 0.00 0.00 0.00 3.55
800 1186 1.507141 GCACGTTGGGTCCAGAACTG 61.507 60.000 0.00 0.00 0.00 3.16
801 1187 1.227853 GCACGTTGGGTCCAGAACT 60.228 57.895 0.00 0.00 0.00 3.01
834 1224 4.169696 CTATCGCCCGTTGCCCCA 62.170 66.667 0.00 0.00 36.24 4.96
835 1225 3.178540 ATCTATCGCCCGTTGCCCC 62.179 63.158 0.00 0.00 36.24 5.80
836 1226 1.961277 CATCTATCGCCCGTTGCCC 60.961 63.158 0.00 0.00 36.24 5.36
855 1245 0.904649 TGGCATTGACCGATGAGACT 59.095 50.000 1.55 0.00 0.00 3.24
956 1358 1.105167 GGGGTTTATAAGGTGCGGGC 61.105 60.000 0.00 0.00 0.00 6.13
975 1377 1.893808 CGGAGGATTGGGGATTGCG 60.894 63.158 0.00 0.00 0.00 4.85
976 1378 0.819666 GACGGAGGATTGGGGATTGC 60.820 60.000 0.00 0.00 0.00 3.56
1021 1425 2.541762 GCGATCTCTCTGTTGTATTGGC 59.458 50.000 0.00 0.00 0.00 4.52
1593 2102 7.038048 CACAATGATACAGAAGAAGCAGTAGA 58.962 38.462 0.00 0.00 0.00 2.59
1611 2120 1.980765 AGACTGAAGAGGCCACAATGA 59.019 47.619 5.01 0.00 0.00 2.57
1613 2122 2.613977 CGAAGACTGAAGAGGCCACAAT 60.614 50.000 5.01 0.00 0.00 2.71
1674 2215 2.965147 TCTCATCGGATCACAAGGCATA 59.035 45.455 0.00 0.00 0.00 3.14
1693 2234 7.502561 GGTTAAACTGGGATTAATACAGCATCT 59.497 37.037 15.80 4.92 35.70 2.90
1722 2275 1.165907 ACAACACACCAGATGCACCG 61.166 55.000 0.00 0.00 0.00 4.94
1724 2277 0.318107 GCACAACACACCAGATGCAC 60.318 55.000 0.00 0.00 33.27 4.57
1741 3028 4.412843 TCGTAGTGGGATATAGATTGGCA 58.587 43.478 0.00 0.00 0.00 4.92
1758 3487 9.507280 AATAATGCTCAAAACAATCAATCGTAG 57.493 29.630 0.00 0.00 0.00 3.51
1768 3498 7.531857 TCCCAACTAATAATGCTCAAAACAA 57.468 32.000 0.00 0.00 0.00 2.83
1770 3500 9.516314 GTATTCCCAACTAATAATGCTCAAAAC 57.484 33.333 0.00 0.00 0.00 2.43
1780 3510 4.517453 GCCGCATGTATTCCCAACTAATAA 59.483 41.667 0.00 0.00 0.00 1.40
1795 3525 5.628433 ATCATCAGATATACATGCCGCATGT 60.628 40.000 34.80 34.80 43.90 3.21
1798 3528 3.959535 TCATCAGATATACATGCCGCA 57.040 42.857 0.00 0.00 0.00 5.69
1810 3540 9.458727 AACAAGTTGACAGAAATATCATCAGAT 57.541 29.630 10.54 0.00 38.29 2.90
1811 3541 8.724229 CAACAAGTTGACAGAAATATCATCAGA 58.276 33.333 10.54 0.00 42.93 3.27
1812 3542 7.966753 CCAACAAGTTGACAGAAATATCATCAG 59.033 37.037 10.54 0.00 42.93 2.90
1813 3543 7.665145 TCCAACAAGTTGACAGAAATATCATCA 59.335 33.333 10.54 0.00 42.93 3.07
1814 3544 8.044060 TCCAACAAGTTGACAGAAATATCATC 57.956 34.615 10.54 0.00 42.93 2.92
1815 3545 8.464404 CATCCAACAAGTTGACAGAAATATCAT 58.536 33.333 10.54 0.00 42.93 2.45
1816 3546 7.665145 TCATCCAACAAGTTGACAGAAATATCA 59.335 33.333 10.54 0.00 42.93 2.15
1817 3547 8.044060 TCATCCAACAAGTTGACAGAAATATC 57.956 34.615 10.54 0.00 42.93 1.63
1818 3548 8.299570 GTTCATCCAACAAGTTGACAGAAATAT 58.700 33.333 10.54 0.00 42.93 1.28
1819 3549 7.502226 AGTTCATCCAACAAGTTGACAGAAATA 59.498 33.333 10.54 0.00 42.93 1.40
1820 3550 6.322201 AGTTCATCCAACAAGTTGACAGAAAT 59.678 34.615 10.54 10.23 42.93 2.17
1821 3551 5.652014 AGTTCATCCAACAAGTTGACAGAAA 59.348 36.000 10.54 0.37 42.93 2.52
1822 3552 5.192927 AGTTCATCCAACAAGTTGACAGAA 58.807 37.500 10.54 10.85 42.93 3.02
1823 3553 4.780815 AGTTCATCCAACAAGTTGACAGA 58.219 39.130 10.54 3.00 42.93 3.41
1824 3554 5.505173 AAGTTCATCCAACAAGTTGACAG 57.495 39.130 10.54 3.85 42.93 3.51
1825 3555 5.652014 AGAAAGTTCATCCAACAAGTTGACA 59.348 36.000 10.54 1.27 42.93 3.58
1826 3556 6.136541 AGAAAGTTCATCCAACAAGTTGAC 57.863 37.500 10.54 4.37 42.93 3.18
1827 3557 6.773976 AAGAAAGTTCATCCAACAAGTTGA 57.226 33.333 10.54 1.68 42.93 3.18
1828 3558 6.256321 CCAAAGAAAGTTCATCCAACAAGTTG 59.744 38.462 0.00 0.00 37.48 3.16
1829 3559 6.154363 TCCAAAGAAAGTTCATCCAACAAGTT 59.846 34.615 0.00 0.00 37.48 2.66
1830 3560 5.656416 TCCAAAGAAAGTTCATCCAACAAGT 59.344 36.000 0.00 0.00 37.48 3.16
1831 3561 6.147864 TCCAAAGAAAGTTCATCCAACAAG 57.852 37.500 0.00 0.00 37.48 3.16
1832 3562 6.154363 AGTTCCAAAGAAAGTTCATCCAACAA 59.846 34.615 0.00 0.00 37.48 2.83
1833 3563 5.656416 AGTTCCAAAGAAAGTTCATCCAACA 59.344 36.000 0.00 0.00 37.48 3.33
1834 3564 6.149129 AGTTCCAAAGAAAGTTCATCCAAC 57.851 37.500 0.00 0.00 32.58 3.77
1835 3565 6.154363 ACAAGTTCCAAAGAAAGTTCATCCAA 59.846 34.615 0.00 0.00 32.58 3.53
1836 3566 5.656416 ACAAGTTCCAAAGAAAGTTCATCCA 59.344 36.000 0.00 0.00 32.58 3.41
1837 3567 6.149129 ACAAGTTCCAAAGAAAGTTCATCC 57.851 37.500 0.00 0.00 32.58 3.51
1838 3568 6.476706 CCAACAAGTTCCAAAGAAAGTTCATC 59.523 38.462 0.00 0.00 32.58 2.92
1839 3569 6.154363 TCCAACAAGTTCCAAAGAAAGTTCAT 59.846 34.615 0.00 0.00 32.58 2.57
1840 3570 5.478679 TCCAACAAGTTCCAAAGAAAGTTCA 59.521 36.000 0.00 0.00 32.58 3.18
1841 3571 5.961272 TCCAACAAGTTCCAAAGAAAGTTC 58.039 37.500 0.00 0.00 32.58 3.01
1842 3572 5.993748 TCCAACAAGTTCCAAAGAAAGTT 57.006 34.783 0.00 0.00 32.58 2.66
1843 3573 5.656416 TCATCCAACAAGTTCCAAAGAAAGT 59.344 36.000 0.00 0.00 32.58 2.66
1844 3574 6.147864 TCATCCAACAAGTTCCAAAGAAAG 57.852 37.500 0.00 0.00 32.58 2.62
1845 3575 6.154363 AGTTCATCCAACAAGTTCCAAAGAAA 59.846 34.615 0.00 0.00 37.48 2.52
1846 3576 5.656416 AGTTCATCCAACAAGTTCCAAAGAA 59.344 36.000 0.00 0.00 37.48 2.52
1847 3577 5.200483 AGTTCATCCAACAAGTTCCAAAGA 58.800 37.500 0.00 0.00 37.48 2.52
1848 3578 5.520376 AGTTCATCCAACAAGTTCCAAAG 57.480 39.130 0.00 0.00 37.48 2.77
1849 3579 5.930837 AAGTTCATCCAACAAGTTCCAAA 57.069 34.783 0.00 0.00 37.48 3.28
1850 3580 5.656416 AGAAAGTTCATCCAACAAGTTCCAA 59.344 36.000 0.00 0.00 37.48 3.53
1851 3581 5.200483 AGAAAGTTCATCCAACAAGTTCCA 58.800 37.500 0.00 0.00 37.48 3.53
1852 3582 5.774498 AGAAAGTTCATCCAACAAGTTCC 57.226 39.130 0.00 0.00 37.48 3.62
1853 3583 8.099364 TCATAGAAAGTTCATCCAACAAGTTC 57.901 34.615 0.00 0.00 37.48 3.01
1854 3584 8.641498 ATCATAGAAAGTTCATCCAACAAGTT 57.359 30.769 0.00 0.00 37.48 2.66
1855 3585 7.884877 TGATCATAGAAAGTTCATCCAACAAGT 59.115 33.333 0.00 0.00 37.48 3.16
1856 3586 8.272545 TGATCATAGAAAGTTCATCCAACAAG 57.727 34.615 0.00 0.00 37.48 3.16
1857 3587 8.812513 ATGATCATAGAAAGTTCATCCAACAA 57.187 30.769 6.36 0.00 37.48 2.83
1858 3588 7.225341 CGATGATCATAGAAAGTTCATCCAACA 59.775 37.037 8.54 0.00 38.26 3.33
1859 3589 7.307632 CCGATGATCATAGAAAGTTCATCCAAC 60.308 40.741 16.51 0.00 38.26 3.77
1860 3590 6.707608 CCGATGATCATAGAAAGTTCATCCAA 59.292 38.462 16.51 0.00 38.26 3.53
1861 3591 6.226052 CCGATGATCATAGAAAGTTCATCCA 58.774 40.000 16.51 0.00 38.26 3.41
1862 3592 5.641209 CCCGATGATCATAGAAAGTTCATCC 59.359 44.000 16.51 0.00 38.26 3.51
1863 3593 6.459066 TCCCGATGATCATAGAAAGTTCATC 58.541 40.000 16.51 0.00 38.18 2.92
1864 3594 6.425210 TCCCGATGATCATAGAAAGTTCAT 57.575 37.500 16.51 0.00 0.00 2.57
1865 3595 5.869649 TCCCGATGATCATAGAAAGTTCA 57.130 39.130 16.51 0.00 0.00 3.18
1866 3596 6.348050 GCATTCCCGATGATCATAGAAAGTTC 60.348 42.308 16.51 0.00 38.03 3.01
1867 3597 5.471456 GCATTCCCGATGATCATAGAAAGTT 59.529 40.000 16.51 0.68 38.03 2.66
1868 3598 4.999950 GCATTCCCGATGATCATAGAAAGT 59.000 41.667 16.51 1.29 38.03 2.66
1869 3599 5.243981 AGCATTCCCGATGATCATAGAAAG 58.756 41.667 16.51 13.21 38.03 2.62
1870 3600 5.233083 AGCATTCCCGATGATCATAGAAA 57.767 39.130 16.51 10.68 38.03 2.52
1871 3601 4.897509 AGCATTCCCGATGATCATAGAA 57.102 40.909 16.51 15.27 38.03 2.10
1872 3602 6.155049 TGAATAGCATTCCCGATGATCATAGA 59.845 38.462 16.51 7.76 38.03 1.98
1873 3603 6.343703 TGAATAGCATTCCCGATGATCATAG 58.656 40.000 8.54 8.64 38.03 2.23
1874 3604 6.298441 TGAATAGCATTCCCGATGATCATA 57.702 37.500 8.54 0.00 38.03 2.15
1875 3605 5.169992 TGAATAGCATTCCCGATGATCAT 57.830 39.130 8.25 8.25 38.03 2.45
1876 3606 4.572909 CTGAATAGCATTCCCGATGATCA 58.427 43.478 0.00 0.00 38.03 2.92
1899 3629 1.001181 CACTCCCCCAGCAAATGTTTG 59.999 52.381 1.19 1.19 41.03 2.93
1900 3630 1.133199 TCACTCCCCCAGCAAATGTTT 60.133 47.619 0.00 0.00 0.00 2.83
1901 3631 0.482446 TCACTCCCCCAGCAAATGTT 59.518 50.000 0.00 0.00 0.00 2.71
1902 3632 0.251341 GTCACTCCCCCAGCAAATGT 60.251 55.000 0.00 0.00 0.00 2.71
1903 3633 0.251297 TGTCACTCCCCCAGCAAATG 60.251 55.000 0.00 0.00 0.00 2.32
1904 3634 0.706433 ATGTCACTCCCCCAGCAAAT 59.294 50.000 0.00 0.00 0.00 2.32
1905 3635 0.482446 AATGTCACTCCCCCAGCAAA 59.518 50.000 0.00 0.00 0.00 3.68
1906 3636 0.482446 AAATGTCACTCCCCCAGCAA 59.518 50.000 0.00 0.00 0.00 3.91
1907 3637 0.251297 CAAATGTCACTCCCCCAGCA 60.251 55.000 0.00 0.00 0.00 4.41
1908 3638 1.598701 GCAAATGTCACTCCCCCAGC 61.599 60.000 0.00 0.00 0.00 4.85
1909 3639 1.308069 CGCAAATGTCACTCCCCCAG 61.308 60.000 0.00 0.00 0.00 4.45
1910 3640 1.303236 CGCAAATGTCACTCCCCCA 60.303 57.895 0.00 0.00 0.00 4.96
1911 3641 0.608035 TTCGCAAATGTCACTCCCCC 60.608 55.000 0.00 0.00 0.00 5.40
1912 3642 0.521735 GTTCGCAAATGTCACTCCCC 59.478 55.000 0.00 0.00 0.00 4.81
1913 3643 0.165944 CGTTCGCAAATGTCACTCCC 59.834 55.000 0.00 0.00 0.00 4.30
1914 3644 0.865769 ACGTTCGCAAATGTCACTCC 59.134 50.000 0.00 0.00 28.07 3.85
1915 3645 2.663279 AACGTTCGCAAATGTCACTC 57.337 45.000 0.00 0.00 33.42 3.51
1916 3646 3.414549 AAAACGTTCGCAAATGTCACT 57.585 38.095 0.00 0.00 33.42 3.41
1917 3647 3.544285 TGAAAAACGTTCGCAAATGTCAC 59.456 39.130 0.00 0.00 33.42 3.67
1918 3648 3.544285 GTGAAAAACGTTCGCAAATGTCA 59.456 39.130 0.00 0.00 33.42 3.58
1919 3649 4.084447 GTGAAAAACGTTCGCAAATGTC 57.916 40.909 0.00 0.00 33.42 3.06
1932 3662 5.898630 ACAACATAATTGCCGTGAAAAAC 57.101 34.783 0.00 0.00 0.00 2.43
1933 3663 6.504398 TGTACAACATAATTGCCGTGAAAAA 58.496 32.000 0.00 0.00 0.00 1.94
1934 3664 6.017026 TCTGTACAACATAATTGCCGTGAAAA 60.017 34.615 0.00 0.00 0.00 2.29
1935 3665 5.470437 TCTGTACAACATAATTGCCGTGAAA 59.530 36.000 0.00 0.00 0.00 2.69
1936 3666 4.998033 TCTGTACAACATAATTGCCGTGAA 59.002 37.500 0.00 0.00 0.00 3.18
1937 3667 4.570930 TCTGTACAACATAATTGCCGTGA 58.429 39.130 0.00 0.00 0.00 4.35
1938 3668 4.727734 GCTCTGTACAACATAATTGCCGTG 60.728 45.833 0.00 0.00 0.00 4.94
1939 3669 3.374058 GCTCTGTACAACATAATTGCCGT 59.626 43.478 0.00 0.00 0.00 5.68
1940 3670 3.373748 TGCTCTGTACAACATAATTGCCG 59.626 43.478 0.00 0.00 0.00 5.69
1941 3671 4.963276 TGCTCTGTACAACATAATTGCC 57.037 40.909 0.00 0.00 0.00 4.52
1942 3672 5.200454 CGATGCTCTGTACAACATAATTGC 58.800 41.667 0.00 0.00 0.00 3.56
1943 3673 5.200454 GCGATGCTCTGTACAACATAATTG 58.800 41.667 0.00 0.00 0.00 2.32
1944 3674 4.875536 TGCGATGCTCTGTACAACATAATT 59.124 37.500 0.00 0.00 0.00 1.40
1945 3675 4.441792 TGCGATGCTCTGTACAACATAAT 58.558 39.130 0.00 0.00 0.00 1.28
1946 3676 3.855858 TGCGATGCTCTGTACAACATAA 58.144 40.909 0.00 0.00 0.00 1.90
1947 3677 3.518634 TGCGATGCTCTGTACAACATA 57.481 42.857 0.00 0.00 0.00 2.29
1948 3678 2.385013 TGCGATGCTCTGTACAACAT 57.615 45.000 0.00 1.02 0.00 2.71
1949 3679 2.162319 TTGCGATGCTCTGTACAACA 57.838 45.000 0.00 0.00 0.00 3.33
1950 3680 3.747099 AATTGCGATGCTCTGTACAAC 57.253 42.857 0.00 0.00 0.00 3.32
1951 3681 4.002982 AGAAATTGCGATGCTCTGTACAA 58.997 39.130 0.00 0.00 0.00 2.41
1952 3682 3.599343 AGAAATTGCGATGCTCTGTACA 58.401 40.909 0.00 0.00 0.00 2.90
1953 3683 4.606457 AAGAAATTGCGATGCTCTGTAC 57.394 40.909 0.00 0.00 0.00 2.90
1954 3684 6.675486 GCTTAAAGAAATTGCGATGCTCTGTA 60.675 38.462 0.00 0.00 0.00 2.74
1955 3685 5.627499 TTAAAGAAATTGCGATGCTCTGT 57.373 34.783 0.00 0.00 0.00 3.41
1956 3686 4.498323 GCTTAAAGAAATTGCGATGCTCTG 59.502 41.667 0.00 0.00 0.00 3.35
1957 3687 4.156556 TGCTTAAAGAAATTGCGATGCTCT 59.843 37.500 0.00 0.00 0.00 4.09
1958 3688 4.414852 TGCTTAAAGAAATTGCGATGCTC 58.585 39.130 0.00 0.00 0.00 4.26
1959 3689 4.439305 TGCTTAAAGAAATTGCGATGCT 57.561 36.364 0.00 0.00 0.00 3.79
1960 3690 5.107530 TGTTTGCTTAAAGAAATTGCGATGC 60.108 36.000 0.00 0.00 0.00 3.91
1961 3691 6.074409 TGTGTTTGCTTAAAGAAATTGCGATG 60.074 34.615 0.00 0.00 0.00 3.84
1962 3692 5.982516 TGTGTTTGCTTAAAGAAATTGCGAT 59.017 32.000 0.00 0.00 0.00 4.58
1963 3693 5.344066 TGTGTTTGCTTAAAGAAATTGCGA 58.656 33.333 0.00 0.00 0.00 5.10
1964 3694 5.633996 TGTGTTTGCTTAAAGAAATTGCG 57.366 34.783 0.00 0.00 0.00 4.85
1965 3695 6.770076 TGTTGTGTTTGCTTAAAGAAATTGC 58.230 32.000 0.00 0.00 0.00 3.56
1966 3696 9.771915 ATTTGTTGTGTTTGCTTAAAGAAATTG 57.228 25.926 0.00 0.00 0.00 2.32
1975 3705 9.548208 GCTTTAAAAATTTGTTGTGTTTGCTTA 57.452 25.926 0.00 0.00 0.00 3.09
1976 3706 8.078596 TGCTTTAAAAATTTGTTGTGTTTGCTT 58.921 25.926 0.00 0.00 0.00 3.91
1977 3707 7.588512 TGCTTTAAAAATTTGTTGTGTTTGCT 58.411 26.923 0.00 0.00 0.00 3.91
1978 3708 7.787823 TGCTTTAAAAATTTGTTGTGTTTGC 57.212 28.000 0.00 0.00 0.00 3.68
2001 3731 5.389098 CGATTTCTGGCAAAGCAAGAATTTG 60.389 40.000 9.45 6.73 46.34 2.32
2002 3732 4.687483 CGATTTCTGGCAAAGCAAGAATTT 59.313 37.500 9.45 1.53 46.34 1.82
2003 3733 4.240096 CGATTTCTGGCAAAGCAAGAATT 58.760 39.130 9.45 6.46 46.34 2.17
2004 3734 3.256631 ACGATTTCTGGCAAAGCAAGAAT 59.743 39.130 9.45 1.26 46.34 2.40
2005 3735 2.622942 ACGATTTCTGGCAAAGCAAGAA 59.377 40.909 4.76 4.76 45.57 2.52
2006 3736 2.226437 GACGATTTCTGGCAAAGCAAGA 59.774 45.455 0.00 0.00 36.75 3.02
2007 3737 2.030893 TGACGATTTCTGGCAAAGCAAG 60.031 45.455 0.00 0.00 0.00 4.01
2008 3738 1.952990 TGACGATTTCTGGCAAAGCAA 59.047 42.857 0.00 0.00 0.00 3.91
2009 3739 1.536766 CTGACGATTTCTGGCAAAGCA 59.463 47.619 0.00 0.00 0.00 3.91
2010 3740 1.806542 TCTGACGATTTCTGGCAAAGC 59.193 47.619 0.00 0.00 0.00 3.51
2011 3741 3.070018 ACTCTGACGATTTCTGGCAAAG 58.930 45.455 0.00 0.00 0.00 2.77
2012 3742 3.126001 ACTCTGACGATTTCTGGCAAA 57.874 42.857 0.00 0.00 0.00 3.68
2013 3743 2.839486 ACTCTGACGATTTCTGGCAA 57.161 45.000 0.00 0.00 0.00 4.52
2014 3744 2.839486 AACTCTGACGATTTCTGGCA 57.161 45.000 0.00 0.00 0.00 4.92
2015 3745 3.330267 AGAAACTCTGACGATTTCTGGC 58.670 45.455 0.00 0.00 40.35 4.85
2027 3757 4.014847 TGCAAAAACGTCAGAAACTCTG 57.985 40.909 0.00 0.00 45.59 3.35
2028 3758 3.065371 CCTGCAAAAACGTCAGAAACTCT 59.935 43.478 2.95 0.00 0.00 3.24
2029 3759 3.064820 TCCTGCAAAAACGTCAGAAACTC 59.935 43.478 2.95 0.00 0.00 3.01
2030 3760 3.013921 TCCTGCAAAAACGTCAGAAACT 58.986 40.909 2.95 0.00 0.00 2.66
2031 3761 3.414549 TCCTGCAAAAACGTCAGAAAC 57.585 42.857 2.95 0.00 0.00 2.78
2032 3762 4.442375 TTTCCTGCAAAAACGTCAGAAA 57.558 36.364 2.95 0.54 0.00 2.52
2033 3763 4.442375 TTTTCCTGCAAAAACGTCAGAA 57.558 36.364 2.95 0.00 30.58 3.02
2034 3764 4.442375 TTTTTCCTGCAAAAACGTCAGA 57.558 36.364 2.95 0.00 38.76 3.27
2059 3789 1.070038 GGGACGTTCGTATTTGCGAA 58.930 50.000 0.00 0.00 46.78 4.70
2060 3790 0.737019 GGGGACGTTCGTATTTGCGA 60.737 55.000 0.00 0.00 39.28 5.10
2061 3791 0.738412 AGGGGACGTTCGTATTTGCG 60.738 55.000 0.00 0.00 0.00 4.85
2062 3792 1.004595 GAGGGGACGTTCGTATTTGC 58.995 55.000 0.00 0.00 0.00 3.68
2063 3793 1.997606 GTGAGGGGACGTTCGTATTTG 59.002 52.381 0.00 0.00 0.00 2.32
2064 3794 1.897802 AGTGAGGGGACGTTCGTATTT 59.102 47.619 0.00 0.00 0.00 1.40
2065 3795 1.553706 AGTGAGGGGACGTTCGTATT 58.446 50.000 0.00 0.00 0.00 1.89
2066 3796 2.425143 TAGTGAGGGGACGTTCGTAT 57.575 50.000 0.00 0.00 0.00 3.06
2067 3797 2.425143 ATAGTGAGGGGACGTTCGTA 57.575 50.000 0.00 0.00 0.00 3.43
2068 3798 2.295885 CTATAGTGAGGGGACGTTCGT 58.704 52.381 0.00 0.00 0.00 3.85
2069 3799 1.607628 CCTATAGTGAGGGGACGTTCG 59.392 57.143 0.00 0.00 32.39 3.95
2078 3808 3.260269 TCATGGACCCCTATAGTGAGG 57.740 52.381 0.00 0.00 36.23 3.86
2079 3809 7.038017 ACAATAATCATGGACCCCTATAGTGAG 60.038 40.741 0.00 0.00 0.00 3.51
2080 3810 6.792473 ACAATAATCATGGACCCCTATAGTGA 59.208 38.462 0.00 0.00 0.00 3.41
2081 3811 7.020827 ACAATAATCATGGACCCCTATAGTG 57.979 40.000 0.00 0.00 0.00 2.74
2082 3812 7.025620 AGACAATAATCATGGACCCCTATAGT 58.974 38.462 0.00 0.00 0.00 2.12
2083 3813 7.502060 AGACAATAATCATGGACCCCTATAG 57.498 40.000 0.00 0.00 0.00 1.31
2084 3814 7.515861 TCAAGACAATAATCATGGACCCCTATA 59.484 37.037 0.00 0.00 0.00 1.31
2085 3815 6.332635 TCAAGACAATAATCATGGACCCCTAT 59.667 38.462 0.00 0.00 0.00 2.57
2086 3816 5.669904 TCAAGACAATAATCATGGACCCCTA 59.330 40.000 0.00 0.00 0.00 3.53
2087 3817 4.478317 TCAAGACAATAATCATGGACCCCT 59.522 41.667 0.00 0.00 0.00 4.79
2088 3818 4.792068 TCAAGACAATAATCATGGACCCC 58.208 43.478 0.00 0.00 0.00 4.95
2089 3819 6.736794 GCATTCAAGACAATAATCATGGACCC 60.737 42.308 0.00 0.00 0.00 4.46
2090 3820 6.183360 TGCATTCAAGACAATAATCATGGACC 60.183 38.462 0.00 0.00 0.00 4.46
2091 3821 6.798482 TGCATTCAAGACAATAATCATGGAC 58.202 36.000 0.00 0.00 0.00 4.02
2092 3822 7.255695 GGATGCATTCAAGACAATAATCATGGA 60.256 37.037 0.00 0.00 0.00 3.41
2093 3823 6.866770 GGATGCATTCAAGACAATAATCATGG 59.133 38.462 0.00 0.00 0.00 3.66
2094 3824 7.430441 TGGATGCATTCAAGACAATAATCATG 58.570 34.615 4.79 0.00 0.00 3.07
2095 3825 7.591421 TGGATGCATTCAAGACAATAATCAT 57.409 32.000 4.79 0.00 0.00 2.45
2096 3826 6.460537 GCTGGATGCATTCAAGACAATAATCA 60.461 38.462 9.47 0.00 42.31 2.57
2097 3827 5.919141 GCTGGATGCATTCAAGACAATAATC 59.081 40.000 9.47 0.00 42.31 1.75
2098 3828 5.506815 CGCTGGATGCATTCAAGACAATAAT 60.507 40.000 9.47 0.00 43.06 1.28
2099 3829 4.201940 CGCTGGATGCATTCAAGACAATAA 60.202 41.667 9.47 0.00 43.06 1.40
2100 3830 3.313249 CGCTGGATGCATTCAAGACAATA 59.687 43.478 9.47 0.00 43.06 1.90
2101 3831 2.098607 CGCTGGATGCATTCAAGACAAT 59.901 45.455 9.47 0.00 43.06 2.71
2102 3832 1.469703 CGCTGGATGCATTCAAGACAA 59.530 47.619 9.47 0.00 43.06 3.18
2103 3833 1.089112 CGCTGGATGCATTCAAGACA 58.911 50.000 9.47 0.00 43.06 3.41
2104 3834 1.089920 ACGCTGGATGCATTCAAGAC 58.910 50.000 9.47 0.74 43.06 3.01
2105 3835 2.689553 TACGCTGGATGCATTCAAGA 57.310 45.000 9.47 0.00 43.06 3.02
2106 3836 2.032550 CCTTACGCTGGATGCATTCAAG 59.967 50.000 9.47 8.73 43.06 3.02
2107 3837 2.016318 CCTTACGCTGGATGCATTCAA 58.984 47.619 9.47 0.00 43.06 2.69
2108 3838 1.209261 TCCTTACGCTGGATGCATTCA 59.791 47.619 7.63 7.63 43.06 2.57
2109 3839 1.953559 TCCTTACGCTGGATGCATTC 58.046 50.000 0.00 0.00 43.06 2.67
2110 3840 2.292267 CTTCCTTACGCTGGATGCATT 58.708 47.619 0.00 0.00 43.06 3.56
2111 3841 1.959042 CTTCCTTACGCTGGATGCAT 58.041 50.000 0.00 0.00 43.06 3.96
2112 3842 3.458872 CTTCCTTACGCTGGATGCA 57.541 52.632 0.00 0.00 43.06 3.96
2113 3843 2.017752 GCTTCCTTACGCTGGATGC 58.982 57.895 11.81 11.81 43.89 3.91
2114 3844 1.576356 GAGCTTCCTTACGCTGGATG 58.424 55.000 0.00 0.00 36.45 3.51
2115 3845 0.103208 CGAGCTTCCTTACGCTGGAT 59.897 55.000 0.00 0.00 36.45 3.41
2116 3846 1.248785 ACGAGCTTCCTTACGCTGGA 61.249 55.000 0.00 0.00 36.45 3.86
2117 3847 0.802607 GACGAGCTTCCTTACGCTGG 60.803 60.000 0.00 0.00 36.45 4.85
2118 3848 0.171455 AGACGAGCTTCCTTACGCTG 59.829 55.000 0.00 0.00 36.45 5.18
2119 3849 0.452585 GAGACGAGCTTCCTTACGCT 59.547 55.000 0.00 0.00 39.61 5.07
2120 3850 0.525882 GGAGACGAGCTTCCTTACGC 60.526 60.000 0.00 0.00 0.00 4.42
2121 3851 0.809385 TGGAGACGAGCTTCCTTACG 59.191 55.000 3.88 0.00 0.00 3.18
2122 3852 1.135333 CCTGGAGACGAGCTTCCTTAC 59.865 57.143 3.88 0.00 0.00 2.34
2123 3853 1.005569 TCCTGGAGACGAGCTTCCTTA 59.994 52.381 3.88 0.00 0.00 2.69
2124 3854 0.251832 TCCTGGAGACGAGCTTCCTT 60.252 55.000 3.88 0.00 0.00 3.36
2125 3855 0.251832 TTCCTGGAGACGAGCTTCCT 60.252 55.000 3.88 0.00 0.00 3.36
2126 3856 0.827368 ATTCCTGGAGACGAGCTTCC 59.173 55.000 0.00 0.00 0.00 3.46
2127 3857 1.933247 CATTCCTGGAGACGAGCTTC 58.067 55.000 0.00 0.00 0.00 3.86
2128 3858 0.107945 GCATTCCTGGAGACGAGCTT 60.108 55.000 0.00 0.00 0.00 3.74
2129 3859 1.260538 TGCATTCCTGGAGACGAGCT 61.261 55.000 0.00 0.00 0.00 4.09
2130 3860 1.086634 GTGCATTCCTGGAGACGAGC 61.087 60.000 0.00 0.00 0.00 5.03
2131 3861 0.803768 CGTGCATTCCTGGAGACGAG 60.804 60.000 11.80 0.00 0.00 4.18
2132 3862 1.215382 CGTGCATTCCTGGAGACGA 59.785 57.895 11.80 0.00 0.00 4.20
2133 3863 2.456119 GCGTGCATTCCTGGAGACG 61.456 63.158 12.51 12.51 0.00 4.18
2134 3864 2.109126 GGCGTGCATTCCTGGAGAC 61.109 63.158 0.00 0.00 0.00 3.36
2135 3865 2.268920 GGCGTGCATTCCTGGAGA 59.731 61.111 0.00 0.00 0.00 3.71
2136 3866 2.930385 ATCGGCGTGCATTCCTGGAG 62.930 60.000 6.85 0.00 0.00 3.86
2137 3867 3.030168 ATCGGCGTGCATTCCTGGA 62.030 57.895 6.85 0.00 0.00 3.86
2138 3868 2.514592 ATCGGCGTGCATTCCTGG 60.515 61.111 6.85 0.00 0.00 4.45
2139 3869 1.815003 TCATCGGCGTGCATTCCTG 60.815 57.895 6.85 0.00 0.00 3.86
2140 3870 1.815421 GTCATCGGCGTGCATTCCT 60.815 57.895 6.85 0.00 0.00 3.36
2141 3871 2.709475 GTCATCGGCGTGCATTCC 59.291 61.111 6.85 0.00 0.00 3.01
2142 3872 2.709475 GGTCATCGGCGTGCATTC 59.291 61.111 6.85 0.00 0.00 2.67
2143 3873 2.824041 GGGTCATCGGCGTGCATT 60.824 61.111 6.85 0.00 0.00 3.56
2144 3874 3.785859 AGGGTCATCGGCGTGCAT 61.786 61.111 6.85 0.00 0.00 3.96
2145 3875 4.758251 CAGGGTCATCGGCGTGCA 62.758 66.667 6.85 0.00 0.00 4.57
2146 3876 3.740128 ATCAGGGTCATCGGCGTGC 62.740 63.158 6.85 1.62 0.00 5.34
2147 3877 1.153369 AATCAGGGTCATCGGCGTG 60.153 57.895 6.85 4.88 0.00 5.34
2148 3878 1.153369 CAATCAGGGTCATCGGCGT 60.153 57.895 6.85 0.00 0.00 5.68
2149 3879 0.461870 TTCAATCAGGGTCATCGGCG 60.462 55.000 0.00 0.00 0.00 6.46
2150 3880 1.750193 TTTCAATCAGGGTCATCGGC 58.250 50.000 0.00 0.00 0.00 5.54
2151 3881 4.989279 AATTTTCAATCAGGGTCATCGG 57.011 40.909 0.00 0.00 0.00 4.18
2152 3882 6.925610 TCTAATTTTCAATCAGGGTCATCG 57.074 37.500 0.00 0.00 0.00 3.84
2189 3921 7.265673 GTTTGTATTGGATCTAGAGTGCAGTA 58.734 38.462 0.00 0.00 0.00 2.74
2193 3925 5.348986 TCGTTTGTATTGGATCTAGAGTGC 58.651 41.667 0.00 0.00 0.00 4.40
2211 3944 9.748708 TTCTTCTGATTTGATTTGAAATCGTTT 57.251 25.926 12.72 0.44 42.82 3.60
2218 3951 8.776470 GGCATTTTTCTTCTGATTTGATTTGAA 58.224 29.630 0.00 0.00 0.00 2.69
2244 3977 7.642194 TGACAACAATTAGCTTAACAGAAAACG 59.358 33.333 0.00 0.00 0.00 3.60
2287 4390 5.006153 TGTCCGTTACAATCTACATGAGG 57.994 43.478 0.00 0.00 34.29 3.86
2335 4438 3.795623 TGACCTATACGAAGGCTGAAC 57.204 47.619 0.00 0.00 40.62 3.18
2340 4443 5.646577 ACTATCATGACCTATACGAAGGC 57.353 43.478 0.00 0.00 40.62 4.35
2346 4449 6.014647 TGGTGGGTACTATCATGACCTATAC 58.985 44.000 0.00 0.00 33.48 1.47
2350 4461 3.309296 CTGGTGGGTACTATCATGACCT 58.691 50.000 0.00 0.00 33.48 3.85
2352 4463 2.434336 TGCTGGTGGGTACTATCATGAC 59.566 50.000 0.00 0.00 0.00 3.06
2359 4470 1.425694 TTGTGTGCTGGTGGGTACTA 58.574 50.000 0.00 0.00 0.00 1.82
2362 4473 0.548989 ACTTTGTGTGCTGGTGGGTA 59.451 50.000 0.00 0.00 0.00 3.69
2372 4483 2.855953 GCAGCTGCTGTAACTTTGTGTG 60.856 50.000 31.33 2.03 38.21 3.82
2386 4497 1.722636 GCTAAGATGTGGGCAGCTGC 61.723 60.000 30.88 30.88 40.95 5.25
2430 4541 6.963242 GTGATGTAACAGTTATGAATGTGCAG 59.037 38.462 0.00 0.00 0.00 4.41
2475 4587 3.067461 CGAGAGAATCCGGAGAAGTTGAT 59.933 47.826 11.34 0.00 33.66 2.57
2478 4595 2.685897 CTCGAGAGAATCCGGAGAAGTT 59.314 50.000 11.34 0.00 41.32 2.66
2557 4674 4.252878 TGTTATGTGATGAGTGTTCGCAT 58.747 39.130 5.23 5.23 44.28 4.73
2597 4714 6.467677 CCTGTGGACCAATGATATACCTTAG 58.532 44.000 0.00 0.00 0.00 2.18
2598 4715 5.221843 GCCTGTGGACCAATGATATACCTTA 60.222 44.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.