Multiple sequence alignment - TraesCS1D01G341900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G341900 chr1D 100.000 8586 0 0 1 8586 431815530 431806945 0.000000e+00 15856.0
1 TraesCS1D01G341900 chr1D 87.234 94 9 1 292 382 431815304 431815211 4.240000e-18 104.0
2 TraesCS1D01G341900 chr1B 94.893 6501 227 45 725 7195 583092296 583085871 0.000000e+00 10069.0
3 TraesCS1D01G341900 chr1B 95.514 847 30 5 7192 8037 583085758 583084919 0.000000e+00 1347.0
4 TraesCS1D01G341900 chr1B 98.485 66 1 0 8052 8117 583084863 583084798 5.450000e-22 117.0
5 TraesCS1D01G341900 chr1A 95.059 5303 177 42 704 5952 530217951 530212680 0.000000e+00 8263.0
6 TraesCS1D01G341900 chr1A 95.640 2179 67 14 5951 8117 530212608 530210446 0.000000e+00 3472.0
7 TraesCS1D01G341900 chr1A 77.720 763 97 32 1 714 530231560 530230822 4.830000e-107 399.0
8 TraesCS1D01G341900 chr1A 78.641 618 115 11 1768 2380 46236754 46237359 2.250000e-105 394.0
9 TraesCS1D01G341900 chr4D 99.363 471 1 2 8118 8586 380462028 380461558 0.000000e+00 852.0
10 TraesCS1D01G341900 chr4D 81.148 244 26 9 1 230 481792199 481792436 2.460000e-40 178.0
11 TraesCS1D01G341900 chr4D 87.059 85 10 1 2537 2621 213214248 213214331 2.550000e-15 95.3
12 TraesCS1D01G341900 chr3D 99.363 471 1 2 8118 8586 433801174 433801644 0.000000e+00 852.0
13 TraesCS1D01G341900 chr3D 98.938 471 3 2 8118 8586 590456847 590456377 0.000000e+00 841.0
14 TraesCS1D01G341900 chr2D 99.363 471 1 2 8117 8586 91803835 91804304 0.000000e+00 852.0
15 TraesCS1D01G341900 chr2D 98.947 475 3 2 8114 8586 636095054 636094580 0.000000e+00 848.0
16 TraesCS1D01G341900 chrUn 98.721 469 3 3 8120 8586 104482985 104483452 0.000000e+00 830.0
17 TraesCS1D01G341900 chr7A 89.873 474 38 9 8118 8586 536936808 536937276 1.230000e-167 601.0
18 TraesCS1D01G341900 chr7A 82.500 200 22 8 2 188 174451363 174451562 6.900000e-36 163.0
19 TraesCS1D01G341900 chr7A 85.714 63 9 0 311 373 30455720 30455782 5.560000e-07 67.6
20 TraesCS1D01G341900 chr4A 89.451 474 40 9 8118 8586 564747262 564746794 2.670000e-164 590.0
21 TraesCS1D01G341900 chr6A 88.935 479 42 10 8114 8586 454659953 454660426 1.610000e-161 580.0
22 TraesCS1D01G341900 chr6A 78.699 615 114 11 1771 2380 608301346 608300744 2.250000e-105 394.0
23 TraesCS1D01G341900 chr6A 84.024 338 44 5 2726 3060 607844326 607844656 5.000000e-82 316.0
24 TraesCS1D01G341900 chr7B 85.030 334 41 3 2729 3060 507830213 507830539 1.790000e-86 331.0
25 TraesCS1D01G341900 chr7B 85.235 149 20 2 2537 2683 686069986 686070134 1.490000e-32 152.0
26 TraesCS1D01G341900 chr6B 85.030 334 41 3 2729 3060 151912612 151912938 1.790000e-86 331.0
27 TraesCS1D01G341900 chr6B 86.667 165 21 1 2548 2711 332985072 332984908 1.900000e-41 182.0
28 TraesCS1D01G341900 chr6B 82.609 115 17 3 517 630 21877752 21877864 1.970000e-16 99.0
29 TraesCS1D01G341900 chr4B 85.030 334 41 3 2729 3060 139553088 139552762 1.790000e-86 331.0
30 TraesCS1D01G341900 chr3A 82.934 334 47 5 2729 3060 647003814 647004139 8.430000e-75 292.0
31 TraesCS1D01G341900 chr3A 82.934 334 48 4 2729 3060 647007168 647007494 8.430000e-75 292.0
32 TraesCS1D01G341900 chr3A 81.737 334 52 5 2729 3060 646995312 646995638 3.950000e-68 270.0
33 TraesCS1D01G341900 chr3A 83.333 150 23 2 482 630 193578603 193578455 4.180000e-28 137.0
34 TraesCS1D01G341900 chr5A 78.237 363 45 12 290 630 118249450 118249100 1.460000e-47 202.0
35 TraesCS1D01G341900 chr3B 87.273 165 20 1 2548 2711 552953310 552953146 4.090000e-43 187.0
36 TraesCS1D01G341900 chr2B 85.311 177 24 2 2537 2711 624431029 624430853 1.900000e-41 182.0
37 TraesCS1D01G341900 chr2A 83.756 197 20 5 1 185 53440254 53440450 8.860000e-40 176.0
38 TraesCS1D01G341900 chr2A 87.059 85 11 0 2537 2621 266328930 266329014 7.090000e-16 97.1
39 TraesCS1D01G341900 chr5B 89.474 76 8 0 99 174 534165604 534165529 7.090000e-16 97.1
40 TraesCS1D01G341900 chr5B 92.683 41 3 0 297 337 570861535 570861495 9.310000e-05 60.2
41 TraesCS1D01G341900 chr7D 84.783 92 9 4 541 630 596853308 596853396 4.270000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G341900 chr1D 431806945 431815530 8585 True 7980.000000 15856 93.617000 1 8586 2 chr1D.!!$R1 8585
1 TraesCS1D01G341900 chr1B 583084798 583092296 7498 True 3844.333333 10069 96.297333 725 8117 3 chr1B.!!$R1 7392
2 TraesCS1D01G341900 chr1A 530210446 530217951 7505 True 5867.500000 8263 95.349500 704 8117 2 chr1A.!!$R2 7413
3 TraesCS1D01G341900 chr1A 530230822 530231560 738 True 399.000000 399 77.720000 1 714 1 chr1A.!!$R1 713
4 TraesCS1D01G341900 chr1A 46236754 46237359 605 False 394.000000 394 78.641000 1768 2380 1 chr1A.!!$F1 612
5 TraesCS1D01G341900 chr6A 608300744 608301346 602 True 394.000000 394 78.699000 1771 2380 1 chr6A.!!$R1 609
6 TraesCS1D01G341900 chr3A 647003814 647007494 3680 False 292.000000 292 82.934000 2729 3060 2 chr3A.!!$F2 331

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
849 941 0.038166 GACAGCCTGGGAAATGACCA 59.962 55.0 0.00 0.00 36.38 4.02 F
1587 1718 0.179150 GAGTCCAGCGTGCTCTGTAG 60.179 60.0 0.00 0.00 32.32 2.74 F
1588 1719 0.609406 AGTCCAGCGTGCTCTGTAGA 60.609 55.0 0.00 0.00 32.32 2.59 F
1589 1720 0.179150 GTCCAGCGTGCTCTGTAGAG 60.179 60.0 4.53 4.53 44.75 2.43 F
3495 6557 0.250295 TTGTAGCACAGGCACCAGTC 60.250 55.0 0.00 0.00 44.61 3.51 F
4313 7385 0.976641 TGGTTGTGCAGTCTAGAGGG 59.023 55.0 0.00 0.00 0.00 4.30 F
5801 8887 0.178967 TGCAGCAATTCAGGGGTTGA 60.179 50.0 0.00 0.00 0.00 3.18 F
6469 9630 1.180029 CAGATTTGCAAGGTCAGGGG 58.820 55.0 14.08 0.85 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2515 2656 2.452600 AAACAACCCCACATGTCACT 57.547 45.000 0.00 0.00 0.00 3.41 R
3092 4969 3.470888 CCAGTACCAGGAGGCCCG 61.471 72.222 0.00 0.00 39.06 6.13 R
3301 5903 4.090354 CGTCAAGCCTGCATTTTAAATGTG 59.910 41.667 17.51 11.23 0.00 3.21 R
3564 6627 5.251700 ACAATCTGAGGTCAGGAAAAGGTAT 59.748 40.000 7.14 0.00 43.91 2.73 R
4780 7861 0.449388 CTCTTTGTGAATCGCCCAGC 59.551 55.000 0.00 0.00 0.00 4.85 R
6055 9216 2.415893 GCCACAGTCAACAATACCATGC 60.416 50.000 0.00 0.00 0.00 4.06 R
7049 10212 0.683412 AGGTTACCGAGAACACACCC 59.317 55.000 0.00 0.00 0.00 4.61 R
8133 11462 0.179000 CGCACAAGGGCCTCTAAGAT 59.821 55.000 6.46 0.00 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.242475 TGGAGATGTTAACTAGTTGTGCG 58.758 43.478 18.56 0.00 0.00 5.34
43 44 3.044059 GCTGGCGACCATCAAGCAC 62.044 63.158 0.00 0.00 30.82 4.40
48 49 2.434185 GACCATCAAGCACGGCGA 60.434 61.111 16.62 0.00 0.00 5.54
105 107 3.737172 CGTTTGGCCGGGAGCAAG 61.737 66.667 2.18 0.00 46.50 4.01
106 108 3.373565 GTTTGGCCGGGAGCAAGG 61.374 66.667 2.18 0.00 46.50 3.61
107 109 3.897122 TTTGGCCGGGAGCAAGGT 61.897 61.111 2.18 0.00 46.50 3.50
143 157 2.435059 GAGAGGAGTTGCGGTGGC 60.435 66.667 0.00 0.00 40.52 5.01
144 158 3.959991 GAGAGGAGTTGCGGTGGCC 62.960 68.421 0.00 0.00 38.85 5.36
155 169 3.486263 GGTGGCCGAAACTCGATG 58.514 61.111 0.00 0.00 43.74 3.84
244 265 4.812476 CGGCGGTGGAGCAATCGA 62.812 66.667 0.00 0.00 39.27 3.59
245 266 2.892425 GGCGGTGGAGCAATCGAG 60.892 66.667 0.00 0.00 39.27 4.04
246 267 3.567797 GCGGTGGAGCAATCGAGC 61.568 66.667 0.00 0.00 37.05 5.03
247 268 3.257561 CGGTGGAGCAATCGAGCG 61.258 66.667 0.00 0.00 40.15 5.03
248 269 2.892425 GGTGGAGCAATCGAGCGG 60.892 66.667 0.00 0.00 40.15 5.52
249 270 3.567797 GTGGAGCAATCGAGCGGC 61.568 66.667 0.00 0.00 40.15 6.53
277 298 4.856801 GGATGCGGCCGGTGATGT 62.857 66.667 29.38 0.00 0.00 3.06
278 299 3.576356 GATGCGGCCGGTGATGTG 61.576 66.667 29.38 0.00 0.00 3.21
281 302 4.856801 GCGGCCGGTGATGTGGAT 62.857 66.667 29.38 0.00 0.00 3.41
282 303 2.896854 CGGCCGGTGATGTGGATG 60.897 66.667 20.10 0.00 0.00 3.51
283 304 2.516930 GGCCGGTGATGTGGATGG 60.517 66.667 1.90 0.00 0.00 3.51
284 305 2.516930 GCCGGTGATGTGGATGGG 60.517 66.667 1.90 0.00 0.00 4.00
285 306 2.192979 CCGGTGATGTGGATGGGG 59.807 66.667 0.00 0.00 0.00 4.96
286 307 2.516930 CGGTGATGTGGATGGGGC 60.517 66.667 0.00 0.00 0.00 5.80
287 308 2.682846 GGTGATGTGGATGGGGCA 59.317 61.111 0.00 0.00 0.00 5.36
288 309 1.231068 GGTGATGTGGATGGGGCAT 59.769 57.895 0.00 0.00 0.00 4.40
289 310 0.825010 GGTGATGTGGATGGGGCATC 60.825 60.000 0.00 0.00 39.87 3.91
290 311 1.148949 TGATGTGGATGGGGCATCG 59.851 57.895 0.00 0.00 41.35 3.84
291 312 1.601759 GATGTGGATGGGGCATCGG 60.602 63.158 0.00 0.00 41.35 4.18
292 313 3.797507 ATGTGGATGGGGCATCGGC 62.798 63.158 0.00 0.00 41.35 5.54
343 364 2.108157 GATGCGGCCGGTGATGTA 59.892 61.111 29.38 0.00 0.00 2.29
347 368 2.278596 CGGCCGGTGATGTAGACG 60.279 66.667 20.10 0.00 0.00 4.18
373 400 2.125512 ACAGCGGTGGAATCGAGC 60.126 61.111 20.20 0.00 0.00 5.03
390 417 2.728383 CGACGACGGAACAACGCT 60.728 61.111 0.00 0.00 37.37 5.07
396 423 0.365859 GACGGAACAACGCTCGATTC 59.634 55.000 0.00 0.00 37.37 2.52
398 425 1.342082 CGGAACAACGCTCGATTCGT 61.342 55.000 5.89 6.99 42.54 3.85
480 557 4.451150 ATGGCGGTGCGACGTGAT 62.451 61.111 0.00 0.00 37.93 3.06
488 565 1.529438 GGTGCGACGTGATGAAGAAAA 59.471 47.619 0.00 0.00 0.00 2.29
489 566 2.411547 GGTGCGACGTGATGAAGAAAAG 60.412 50.000 0.00 0.00 0.00 2.27
490 567 1.798223 TGCGACGTGATGAAGAAAAGG 59.202 47.619 0.00 0.00 0.00 3.11
493 570 1.468914 GACGTGATGAAGAAAAGGGGC 59.531 52.381 0.00 0.00 0.00 5.80
508 586 2.280079 GGCTGGGGGAAGGAATGG 59.720 66.667 0.00 0.00 0.00 3.16
513 591 0.842905 TGGGGGAAGGAATGGAACGA 60.843 55.000 0.00 0.00 0.00 3.85
515 593 0.743345 GGGGAAGGAATGGAACGACG 60.743 60.000 0.00 0.00 0.00 5.12
552 630 3.806316 CGGCTGACGTTTTTACATCTT 57.194 42.857 0.00 0.00 37.93 2.40
560 638 5.050363 TGACGTTTTTACATCTTCAGTGAGC 60.050 40.000 0.00 0.00 0.00 4.26
580 658 3.138304 GCGGAGATGTATATTTGCACCA 58.862 45.455 0.00 0.00 0.00 4.17
581 659 3.058914 GCGGAGATGTATATTTGCACCAC 60.059 47.826 0.00 0.00 0.00 4.16
603 681 8.745590 ACCACAAAGTGTTTTAGTTTACATCTT 58.254 29.630 0.00 0.00 30.81 2.40
610 688 7.172703 AGTGTTTTAGTTTACATCTTCGGAAGG 59.827 37.037 17.19 5.30 0.00 3.46
611 689 6.993902 TGTTTTAGTTTACATCTTCGGAAGGT 59.006 34.615 17.19 7.88 0.00 3.50
612 690 7.041644 TGTTTTAGTTTACATCTTCGGAAGGTG 60.042 37.037 25.47 25.47 45.25 4.00
621 699 3.437213 TCTTCGGAAGGTGGAGATGTAA 58.563 45.455 17.19 0.00 0.00 2.41
625 703 4.766375 TCGGAAGGTGGAGATGTAATTTC 58.234 43.478 0.00 0.00 0.00 2.17
627 705 5.045869 TCGGAAGGTGGAGATGTAATTTCTT 60.046 40.000 0.00 0.00 0.00 2.52
630 708 7.539436 GGAAGGTGGAGATGTAATTTCTTTTC 58.461 38.462 0.00 0.00 0.00 2.29
631 709 7.394641 GGAAGGTGGAGATGTAATTTCTTTTCT 59.605 37.037 0.00 0.00 0.00 2.52
632 710 7.693969 AGGTGGAGATGTAATTTCTTTTCTG 57.306 36.000 0.00 0.00 0.00 3.02
635 713 7.809806 GGTGGAGATGTAATTTCTTTTCTGTTG 59.190 37.037 0.00 0.00 0.00 3.33
655 747 8.939929 TCTGTTGAAGATGCTCTAAAGTAATTG 58.060 33.333 0.00 0.00 0.00 2.32
669 761 9.027202 TCTAAAGTAATTGTGAAAATAACCCCC 57.973 33.333 0.00 0.00 0.00 5.40
672 764 7.476540 AGTAATTGTGAAAATAACCCCCTTC 57.523 36.000 0.00 0.00 0.00 3.46
714 806 7.317390 GCCTCTACTATAATAAAGGTGAGAGC 58.683 42.308 0.00 0.00 0.00 4.09
715 807 7.177744 GCCTCTACTATAATAAAGGTGAGAGCT 59.822 40.741 0.00 0.00 0.00 4.09
768 860 5.392380 CCTCGATTTCAAATTCCACTTCCAG 60.392 44.000 0.00 0.00 0.00 3.86
847 939 1.457346 CAGACAGCCTGGGAAATGAC 58.543 55.000 0.00 0.00 39.23 3.06
849 941 0.038166 GACAGCCTGGGAAATGACCA 59.962 55.000 0.00 0.00 36.38 4.02
850 942 0.251341 ACAGCCTGGGAAATGACCAC 60.251 55.000 0.00 0.00 33.63 4.16
852 944 1.142688 AGCCTGGGAAATGACCACCT 61.143 55.000 0.00 0.00 33.63 4.00
853 945 0.681243 GCCTGGGAAATGACCACCTC 60.681 60.000 0.00 0.00 33.63 3.85
856 948 0.477597 TGGGAAATGACCACCTCCCT 60.478 55.000 15.40 0.00 46.72 4.20
857 949 0.256177 GGGAAATGACCACCTCCCTC 59.744 60.000 9.78 0.00 43.74 4.30
858 950 0.256177 GGAAATGACCACCTCCCTCC 59.744 60.000 0.00 0.00 0.00 4.30
859 951 0.991920 GAAATGACCACCTCCCTCCA 59.008 55.000 0.00 0.00 0.00 3.86
860 952 0.995024 AAATGACCACCTCCCTCCAG 59.005 55.000 0.00 0.00 0.00 3.86
920 1012 2.279517 CGGCTCGCACCATACTCC 60.280 66.667 0.00 0.00 0.00 3.85
945 1041 0.634465 GAAGTCCTCCTCCTCCTCCT 59.366 60.000 0.00 0.00 0.00 3.69
947 1043 1.231928 GTCCTCCTCCTCCTCCTCC 59.768 68.421 0.00 0.00 0.00 4.30
1284 1406 1.960250 GCTGATCTGATCCGCTGGC 60.960 63.158 21.97 11.80 36.69 4.85
1300 1422 1.104577 TGGCCGGTCCAGTTTGAAAC 61.105 55.000 12.86 0.00 40.72 2.78
1364 1486 2.316119 AGCGCTTTAGCTTCGTTTTG 57.684 45.000 2.64 0.00 46.80 2.44
1365 1487 1.069227 AGCGCTTTAGCTTCGTTTTGG 60.069 47.619 2.64 0.00 46.80 3.28
1445 1572 1.234821 TGCCCGTTTTACTTGCTCTG 58.765 50.000 0.00 0.00 0.00 3.35
1470 1597 5.508489 GCTGCTAGTTCGTACCAATACCATA 60.508 44.000 0.00 0.00 0.00 2.74
1498 1625 2.928334 TGTGGGTGCATTGCAAAATTT 58.072 38.095 13.94 0.00 41.47 1.82
1557 1686 3.825143 AATTGGATAAATGCCCACAGC 57.175 42.857 0.00 0.00 44.14 4.40
1587 1718 0.179150 GAGTCCAGCGTGCTCTGTAG 60.179 60.000 0.00 0.00 32.32 2.74
1588 1719 0.609406 AGTCCAGCGTGCTCTGTAGA 60.609 55.000 0.00 0.00 32.32 2.59
1589 1720 0.179150 GTCCAGCGTGCTCTGTAGAG 60.179 60.000 4.53 4.53 44.75 2.43
1610 1741 3.037549 GGCCATTTATTTGGGATGTGGA 58.962 45.455 0.00 0.00 37.24 4.02
1688 1821 5.008217 GGCACGCAATTATGTAATTCCACTA 59.992 40.000 0.00 0.00 33.88 2.74
1842 1979 5.930135 TGTCTCAACTTTAAGAGGCTTTCT 58.070 37.500 0.00 0.00 37.38 2.52
2028 2169 2.550208 GGCTGGGGATTCTATTACCGTG 60.550 54.545 0.00 0.00 0.00 4.94
2052 2193 3.118629 GCAGGTAGGATGATCAACTGTCA 60.119 47.826 12.17 0.00 0.00 3.58
2384 2525 4.942852 AGCATTATGTCTGTGAGTAGAGC 58.057 43.478 0.00 0.00 0.00 4.09
2387 2528 5.461737 GCATTATGTCTGTGAGTAGAGCTTC 59.538 44.000 0.00 0.00 0.00 3.86
2406 2547 7.821846 AGAGCTTCTCTTTATTTCTTTCATCGT 59.178 33.333 0.00 0.00 37.60 3.73
2470 2611 8.241367 TCATATGCATGATTAGATTGTGAATGC 58.759 33.333 10.16 0.00 36.22 3.56
2484 2625 3.441222 TGTGAATGCCTGCAGTTTGATAG 59.559 43.478 13.81 0.00 0.00 2.08
2515 2656 2.924421 TCCACTTGTGTGCACATAACA 58.076 42.857 24.69 13.88 42.54 2.41
2629 2770 3.006247 GCTTTGCTAGAGGGTCAAGAAG 58.994 50.000 0.00 0.00 0.00 2.85
2667 2808 3.007398 ACAGAGGATTCCTGTCAAGTGAC 59.993 47.826 10.74 4.43 40.55 3.67
2784 4627 5.069318 TGTGACAAGAGCATTTTGTATGGA 58.931 37.500 1.23 0.00 38.78 3.41
2795 4638 5.521372 GCATTTTGTATGGATTCTGAAAGCC 59.479 40.000 0.00 0.00 41.53 4.35
2811 4654 0.676782 AGCCACACAATAAGACCCGC 60.677 55.000 0.00 0.00 0.00 6.13
3092 4969 6.044682 ACACGTAAAGGGTATGTTGCTATAC 58.955 40.000 0.00 0.00 32.42 1.47
3186 5063 3.869246 GGTATGGATATTCGTATTGGGCG 59.131 47.826 0.00 0.00 0.00 6.13
3323 5925 5.229423 TCACATTTAAAATGCAGGCTTGAC 58.771 37.500 0.00 0.00 0.00 3.18
3457 6519 7.549488 AGTCCATTTTATACTGAGAAACTTCCG 59.451 37.037 0.00 0.00 0.00 4.30
3495 6557 0.250295 TTGTAGCACAGGCACCAGTC 60.250 55.000 0.00 0.00 44.61 3.51
3554 6616 5.009010 CAGATGCCTGTCCATTATGTTTACC 59.991 44.000 0.00 0.00 35.70 2.85
3564 6627 8.164733 TGTCCATTATGTTTACCTGAGGTTAAA 58.835 33.333 10.53 5.83 37.09 1.52
3764 6830 6.126409 TCAACACTTGATTTTTGTACCTCCT 58.874 36.000 0.00 0.00 34.08 3.69
3765 6831 6.605594 TCAACACTTGATTTTTGTACCTCCTT 59.394 34.615 0.00 0.00 34.08 3.36
3780 6846 2.770802 CCTCCTTCTCACAGGTGATCAT 59.229 50.000 0.00 0.00 39.13 2.45
3860 6926 8.768501 TCTGTTGACTATAACTCTCACCATAT 57.231 34.615 0.00 0.00 0.00 1.78
4015 7087 5.180117 GTGCTGTCAACATGAATAGTTCTGT 59.820 40.000 0.00 0.00 0.00 3.41
4253 7325 7.994425 ACATCATGTACAATGTTGGTTTAGA 57.006 32.000 7.26 0.00 32.24 2.10
4280 7352 1.198178 CAAAATTGCCAACCTGCATGC 59.802 47.619 11.82 11.82 41.70 4.06
4313 7385 0.976641 TGGTTGTGCAGTCTAGAGGG 59.023 55.000 0.00 0.00 0.00 4.30
4829 7910 1.181786 GTCACTCTAGAGGCTGTGCT 58.818 55.000 23.50 0.00 0.00 4.40
5071 8152 4.156739 AGCTAGGTATGTTCTTTGCAAAGC 59.843 41.667 30.35 19.39 35.99 3.51
5072 8153 3.559238 AGGTATGTTCTTTGCAAAGCG 57.441 42.857 30.35 12.73 35.99 4.68
5364 8450 7.385752 GTGAAAATCACATCCAAATGACACATT 59.614 33.333 5.65 0.00 46.22 2.71
5487 8573 4.754114 GCATGGATGATCTCACTAAACCTC 59.246 45.833 0.00 0.00 0.00 3.85
5610 8696 2.549754 AGGTGCGTGTTCTGATTTCTTG 59.450 45.455 0.00 0.00 0.00 3.02
5775 8861 1.004440 GGGCGCTGTCACTCTTCTT 60.004 57.895 7.64 0.00 0.00 2.52
5801 8887 0.178967 TGCAGCAATTCAGGGGTTGA 60.179 50.000 0.00 0.00 0.00 3.18
5810 8896 5.302823 GCAATTCAGGGGTTGAGCTTTATAT 59.697 40.000 0.00 0.00 37.07 0.86
5811 8897 6.490040 GCAATTCAGGGGTTGAGCTTTATATA 59.510 38.462 0.00 0.00 37.07 0.86
6187 9348 2.619074 GCAAGGTTCTGCTGGAAGGTAT 60.619 50.000 0.00 0.00 39.34 2.73
6469 9630 1.180029 CAGATTTGCAAGGTCAGGGG 58.820 55.000 14.08 0.85 0.00 4.79
6532 9694 6.036083 ACGGAAGAATCTATTTGAATCGTGTG 59.964 38.462 0.00 0.00 30.21 3.82
6566 9728 3.251571 CTCCTGTGTACGCCTTTTCTAC 58.748 50.000 3.51 0.00 0.00 2.59
6659 9821 5.645497 GGATGCTTACAAATCTCAGTTCAGT 59.355 40.000 0.00 0.00 0.00 3.41
6741 9904 8.650714 GCTGTCATTTGTCCTTTCATTTTTATC 58.349 33.333 0.00 0.00 0.00 1.75
6986 10149 2.308570 TCTTGCCTATCTTTTGCAGGGA 59.691 45.455 0.00 0.00 36.21 4.20
7049 10212 5.515797 TTCTAGACTCCATTGGTATGTCG 57.484 43.478 1.86 0.28 33.40 4.35
7064 10227 0.822944 TGTCGGGTGTGTTCTCGGTA 60.823 55.000 0.00 0.00 0.00 4.02
7070 10233 2.498885 GGGTGTGTTCTCGGTAACCTAT 59.501 50.000 0.00 0.00 0.00 2.57
7114 10277 3.285484 AGGATGCTGCAAAGGTAAGATG 58.715 45.455 6.36 0.00 0.00 2.90
7157 10322 6.509418 TGGTCTATGGTTAAAATGCAAGAC 57.491 37.500 0.00 0.00 33.10 3.01
7215 10495 5.600069 AGTAGATGATTGCTGTCATGTCCTA 59.400 40.000 8.77 3.12 38.88 2.94
7254 10535 4.213513 TGGCCTTGCAATTTGGAATTTTT 58.786 34.783 3.32 0.00 0.00 1.94
7319 10600 1.790755 TGAATGTGTTCGACGAAGGG 58.209 50.000 11.25 0.00 37.15 3.95
7401 10682 2.378547 TCCCTCCACTTAAATGGTTGCT 59.621 45.455 2.34 0.00 40.95 3.91
7425 10706 8.817100 GCTTATATTTGCCCAAATTCTTACAAC 58.183 33.333 11.08 0.00 40.99 3.32
7592 10873 1.065551 TCATCCGCTACTGATCACACG 59.934 52.381 0.00 0.00 0.00 4.49
7647 10928 2.554370 TGTTTACTCCAGTTTCCCCG 57.446 50.000 0.00 0.00 0.00 5.73
7677 10958 2.632996 TCTTCACAGGGTAGAGTGGTTG 59.367 50.000 0.00 0.00 36.43 3.77
7712 10993 1.231958 TTCATTGTCACGGTTCGGCC 61.232 55.000 0.00 0.00 0.00 6.13
7823 11104 4.580580 GTGCCTGAGAAATATTTACCTGGG 59.419 45.833 18.41 11.70 0.00 4.45
7841 11122 2.431419 TGGGCATGCTATTTGGTGAATG 59.569 45.455 18.92 0.00 0.00 2.67
7907 11188 6.463995 TGTGCTTTTAGAGTTTGGTTGATT 57.536 33.333 0.00 0.00 0.00 2.57
7908 11189 6.872920 TGTGCTTTTAGAGTTTGGTTGATTT 58.127 32.000 0.00 0.00 0.00 2.17
7909 11190 6.756074 TGTGCTTTTAGAGTTTGGTTGATTTG 59.244 34.615 0.00 0.00 0.00 2.32
8038 11326 3.058293 ACACTGCATGTTTGTTGATACCG 60.058 43.478 0.00 0.00 38.98 4.02
8041 11329 2.294512 TGCATGTTTGTTGATACCGCAA 59.705 40.909 0.00 0.00 0.00 4.85
8042 11330 3.243535 TGCATGTTTGTTGATACCGCAAA 60.244 39.130 0.00 0.00 0.00 3.68
8117 11446 5.511234 AACTAAATCAAGCATCCATGAGC 57.489 39.130 0.00 0.00 0.00 4.26
8118 11447 4.529897 ACTAAATCAAGCATCCATGAGCA 58.470 39.130 0.00 0.00 0.00 4.26
8119 11448 4.579340 ACTAAATCAAGCATCCATGAGCAG 59.421 41.667 0.00 0.00 0.00 4.24
8120 11449 1.982660 ATCAAGCATCCATGAGCAGG 58.017 50.000 0.00 0.00 0.00 4.85
8121 11450 0.106868 TCAAGCATCCATGAGCAGGG 60.107 55.000 0.00 0.00 0.00 4.45
8122 11451 1.455217 AAGCATCCATGAGCAGGGC 60.455 57.895 0.00 0.00 31.15 5.19
8123 11452 2.910994 GCATCCATGAGCAGGGCC 60.911 66.667 0.00 0.00 31.15 5.80
8124 11453 2.593725 CATCCATGAGCAGGGCCG 60.594 66.667 0.00 0.00 31.15 6.13
8125 11454 3.882326 ATCCATGAGCAGGGCCGG 61.882 66.667 0.00 0.00 31.15 6.13
8137 11466 3.878667 GGCCGGCCCTAGCATCTT 61.879 66.667 36.64 0.00 42.56 2.40
8138 11467 2.516888 GGCCGGCCCTAGCATCTTA 61.517 63.158 36.64 0.00 42.56 2.10
8139 11468 1.004440 GCCGGCCCTAGCATCTTAG 60.004 63.158 18.11 0.00 42.56 2.18
8140 11469 1.472662 GCCGGCCCTAGCATCTTAGA 61.473 60.000 18.11 0.00 42.56 2.10
8141 11470 0.605589 CCGGCCCTAGCATCTTAGAG 59.394 60.000 0.00 0.00 42.56 2.43
8142 11471 0.605589 CGGCCCTAGCATCTTAGAGG 59.394 60.000 0.00 0.00 42.56 3.69
8143 11472 0.323302 GGCCCTAGCATCTTAGAGGC 59.677 60.000 11.17 11.17 42.56 4.70
8144 11473 0.323302 GCCCTAGCATCTTAGAGGCC 59.677 60.000 15.48 0.00 40.43 5.19
8145 11474 0.980423 CCCTAGCATCTTAGAGGCCC 59.020 60.000 15.48 0.00 40.43 5.80
8146 11475 1.484065 CCCTAGCATCTTAGAGGCCCT 60.484 57.143 15.48 0.37 40.43 5.19
8147 11476 2.334023 CCTAGCATCTTAGAGGCCCTT 58.666 52.381 15.48 0.00 40.43 3.95
8148 11477 2.038295 CCTAGCATCTTAGAGGCCCTTG 59.962 54.545 15.48 3.52 40.43 3.61
8149 11478 1.589414 AGCATCTTAGAGGCCCTTGT 58.411 50.000 15.48 0.00 40.43 3.16
8150 11479 1.211457 AGCATCTTAGAGGCCCTTGTG 59.789 52.381 15.48 0.00 40.43 3.33
8151 11480 1.673168 CATCTTAGAGGCCCTTGTGC 58.327 55.000 0.00 0.00 0.00 4.57
8152 11481 0.179000 ATCTTAGAGGCCCTTGTGCG 59.821 55.000 0.00 0.00 0.00 5.34
8153 11482 0.902984 TCTTAGAGGCCCTTGTGCGA 60.903 55.000 0.00 0.00 0.00 5.10
8154 11483 0.460987 CTTAGAGGCCCTTGTGCGAG 60.461 60.000 0.00 0.00 0.00 5.03
8155 11484 1.192146 TTAGAGGCCCTTGTGCGAGT 61.192 55.000 0.00 0.00 0.00 4.18
8156 11485 1.192146 TAGAGGCCCTTGTGCGAGTT 61.192 55.000 0.00 0.00 0.00 3.01
8157 11486 1.600916 GAGGCCCTTGTGCGAGTTT 60.601 57.895 0.00 0.00 0.00 2.66
8158 11487 1.578206 GAGGCCCTTGTGCGAGTTTC 61.578 60.000 0.00 0.00 0.00 2.78
8159 11488 1.896660 GGCCCTTGTGCGAGTTTCA 60.897 57.895 0.00 0.00 0.00 2.69
8160 11489 1.244019 GGCCCTTGTGCGAGTTTCAT 61.244 55.000 0.00 0.00 0.00 2.57
8161 11490 1.448985 GCCCTTGTGCGAGTTTCATA 58.551 50.000 0.00 0.00 0.00 2.15
8162 11491 2.017049 GCCCTTGTGCGAGTTTCATAT 58.983 47.619 0.00 0.00 0.00 1.78
8163 11492 3.202906 GCCCTTGTGCGAGTTTCATATA 58.797 45.455 0.00 0.00 0.00 0.86
8164 11493 3.625764 GCCCTTGTGCGAGTTTCATATAA 59.374 43.478 0.00 0.00 0.00 0.98
8165 11494 4.275936 GCCCTTGTGCGAGTTTCATATAAT 59.724 41.667 0.00 0.00 0.00 1.28
8166 11495 5.751680 CCCTTGTGCGAGTTTCATATAATG 58.248 41.667 0.00 0.00 0.00 1.90
8167 11496 5.277974 CCCTTGTGCGAGTTTCATATAATGG 60.278 44.000 0.00 0.00 0.00 3.16
8168 11497 5.277974 CCTTGTGCGAGTTTCATATAATGGG 60.278 44.000 0.00 0.00 0.00 4.00
8169 11498 3.563808 TGTGCGAGTTTCATATAATGGGC 59.436 43.478 0.00 0.00 0.00 5.36
8170 11499 3.058224 GTGCGAGTTTCATATAATGGGCC 60.058 47.826 0.00 0.00 0.00 5.80
8171 11500 2.488153 GCGAGTTTCATATAATGGGCCC 59.512 50.000 17.59 17.59 0.00 5.80
8172 11501 3.810743 GCGAGTTTCATATAATGGGCCCT 60.811 47.826 25.70 5.93 0.00 5.19
8173 11502 4.398319 CGAGTTTCATATAATGGGCCCTT 58.602 43.478 25.70 15.22 0.00 3.95
8174 11503 5.556915 CGAGTTTCATATAATGGGCCCTTA 58.443 41.667 25.70 18.62 0.00 2.69
8175 11504 6.180472 CGAGTTTCATATAATGGGCCCTTAT 58.820 40.000 25.70 23.55 0.00 1.73
8176 11505 7.335627 CGAGTTTCATATAATGGGCCCTTATA 58.664 38.462 25.70 24.75 0.00 0.98
8177 11506 7.827236 CGAGTTTCATATAATGGGCCCTTATAA 59.173 37.037 25.70 12.16 0.00 0.98
8178 11507 9.700831 GAGTTTCATATAATGGGCCCTTATAAT 57.299 33.333 25.70 13.45 0.00 1.28
8183 11512 9.744125 TCATATAATGGGCCCTTATAATAGACT 57.256 33.333 25.70 9.38 0.00 3.24
8185 11514 9.744125 ATATAATGGGCCCTTATAATAGACTCA 57.256 33.333 25.70 6.56 0.00 3.41
8186 11515 6.780198 AATGGGCCCTTATAATAGACTCAA 57.220 37.500 25.70 0.00 0.00 3.02
8187 11516 6.780198 ATGGGCCCTTATAATAGACTCAAA 57.220 37.500 25.70 0.00 0.00 2.69
8188 11517 6.780198 TGGGCCCTTATAATAGACTCAAAT 57.220 37.500 25.70 0.00 0.00 2.32
8189 11518 7.161715 TGGGCCCTTATAATAGACTCAAATT 57.838 36.000 25.70 0.00 0.00 1.82
8190 11519 7.591821 TGGGCCCTTATAATAGACTCAAATTT 58.408 34.615 25.70 0.00 0.00 1.82
8191 11520 7.505585 TGGGCCCTTATAATAGACTCAAATTTG 59.494 37.037 25.70 12.15 0.00 2.32
8192 11521 7.505923 GGGCCCTTATAATAGACTCAAATTTGT 59.494 37.037 17.04 0.00 0.00 2.83
8193 11522 8.914011 GGCCCTTATAATAGACTCAAATTTGTT 58.086 33.333 17.47 6.43 0.00 2.83
8194 11523 9.736023 GCCCTTATAATAGACTCAAATTTGTTG 57.264 33.333 17.47 13.58 0.00 3.33
8206 11535 8.371770 ACTCAAATTTGTTGAGAGTCTAGAAC 57.628 34.615 19.99 0.00 46.57 3.01
8207 11536 7.169982 ACTCAAATTTGTTGAGAGTCTAGAACG 59.830 37.037 19.99 0.00 46.57 3.95
8208 11537 6.984474 TCAAATTTGTTGAGAGTCTAGAACGT 59.016 34.615 17.47 0.00 0.00 3.99
8209 11538 8.139350 TCAAATTTGTTGAGAGTCTAGAACGTA 58.861 33.333 17.47 0.00 0.00 3.57
8210 11539 8.428536 CAAATTTGTTGAGAGTCTAGAACGTAG 58.571 37.037 10.15 0.00 0.00 3.51
8211 11540 4.681835 TGTTGAGAGTCTAGAACGTAGC 57.318 45.455 0.00 0.00 0.00 3.58
8212 11541 4.070009 TGTTGAGAGTCTAGAACGTAGCA 58.930 43.478 0.00 0.00 0.00 3.49
8213 11542 4.083431 TGTTGAGAGTCTAGAACGTAGCAC 60.083 45.833 0.00 0.00 0.00 4.40
8214 11543 3.008330 TGAGAGTCTAGAACGTAGCACC 58.992 50.000 0.00 0.00 0.00 5.01
8215 11544 2.008329 AGAGTCTAGAACGTAGCACCG 58.992 52.381 0.00 0.00 0.00 4.94
8216 11545 1.736681 GAGTCTAGAACGTAGCACCGT 59.263 52.381 0.00 0.00 44.23 4.83
8223 11552 3.972107 ACGTAGCACCGTTTTCAGA 57.028 47.368 0.00 0.00 37.96 3.27
8224 11553 2.450609 ACGTAGCACCGTTTTCAGAT 57.549 45.000 0.00 0.00 37.96 2.90
8225 11554 2.762745 ACGTAGCACCGTTTTCAGATT 58.237 42.857 0.00 0.00 37.96 2.40
8226 11555 3.135994 ACGTAGCACCGTTTTCAGATTT 58.864 40.909 0.00 0.00 37.96 2.17
8227 11556 3.059188 ACGTAGCACCGTTTTCAGATTTG 60.059 43.478 0.00 0.00 37.96 2.32
8228 11557 3.185594 CGTAGCACCGTTTTCAGATTTGA 59.814 43.478 0.00 0.00 0.00 2.69
8229 11558 4.142902 CGTAGCACCGTTTTCAGATTTGAT 60.143 41.667 0.00 0.00 32.27 2.57
8230 11559 4.853924 AGCACCGTTTTCAGATTTGATT 57.146 36.364 0.00 0.00 32.27 2.57
8231 11560 5.957842 AGCACCGTTTTCAGATTTGATTA 57.042 34.783 0.00 0.00 32.27 1.75
8232 11561 6.325919 AGCACCGTTTTCAGATTTGATTAA 57.674 33.333 0.00 0.00 32.27 1.40
8233 11562 6.924111 AGCACCGTTTTCAGATTTGATTAAT 58.076 32.000 0.00 0.00 32.27 1.40
8234 11563 7.378181 AGCACCGTTTTCAGATTTGATTAATT 58.622 30.769 0.00 0.00 32.27 1.40
8235 11564 7.329226 AGCACCGTTTTCAGATTTGATTAATTG 59.671 33.333 0.00 0.00 32.27 2.32
8236 11565 7.328249 GCACCGTTTTCAGATTTGATTAATTGA 59.672 33.333 0.00 0.00 32.27 2.57
8237 11566 9.357652 CACCGTTTTCAGATTTGATTAATTGAT 57.642 29.630 0.00 0.00 32.27 2.57
8238 11567 9.927668 ACCGTTTTCAGATTTGATTAATTGATT 57.072 25.926 0.00 0.00 32.27 2.57
8263 11592 8.795842 TTACAAGTTAGTGTTTCCTTTTCTCA 57.204 30.769 0.00 0.00 32.75 3.27
8264 11593 7.085052 ACAAGTTAGTGTTTCCTTTTCTCAC 57.915 36.000 0.00 0.00 0.00 3.51
8265 11594 6.657541 ACAAGTTAGTGTTTCCTTTTCTCACA 59.342 34.615 0.00 0.00 0.00 3.58
8266 11595 7.175990 ACAAGTTAGTGTTTCCTTTTCTCACAA 59.824 33.333 0.00 0.00 0.00 3.33
8267 11596 7.085052 AGTTAGTGTTTCCTTTTCTCACAAC 57.915 36.000 0.00 0.00 0.00 3.32
8268 11597 4.983671 AGTGTTTCCTTTTCTCACAACC 57.016 40.909 0.00 0.00 0.00 3.77
8269 11598 4.340617 AGTGTTTCCTTTTCTCACAACCA 58.659 39.130 0.00 0.00 0.00 3.67
8270 11599 4.399303 AGTGTTTCCTTTTCTCACAACCAG 59.601 41.667 0.00 0.00 0.00 4.00
8271 11600 4.398044 GTGTTTCCTTTTCTCACAACCAGA 59.602 41.667 0.00 0.00 0.00 3.86
8272 11601 5.067805 GTGTTTCCTTTTCTCACAACCAGAT 59.932 40.000 0.00 0.00 0.00 2.90
8273 11602 5.067674 TGTTTCCTTTTCTCACAACCAGATG 59.932 40.000 0.00 0.00 0.00 2.90
8274 11603 4.705110 TCCTTTTCTCACAACCAGATGA 57.295 40.909 0.00 0.00 0.00 2.92
8275 11604 5.246981 TCCTTTTCTCACAACCAGATGAT 57.753 39.130 0.00 0.00 0.00 2.45
8276 11605 6.373005 TCCTTTTCTCACAACCAGATGATA 57.627 37.500 0.00 0.00 0.00 2.15
8277 11606 6.778821 TCCTTTTCTCACAACCAGATGATAA 58.221 36.000 0.00 0.00 0.00 1.75
8278 11607 7.405292 TCCTTTTCTCACAACCAGATGATAAT 58.595 34.615 0.00 0.00 0.00 1.28
8279 11608 7.890127 TCCTTTTCTCACAACCAGATGATAATT 59.110 33.333 0.00 0.00 0.00 1.40
8280 11609 7.972277 CCTTTTCTCACAACCAGATGATAATTG 59.028 37.037 0.00 0.00 0.00 2.32
8281 11610 6.441093 TTCTCACAACCAGATGATAATTGC 57.559 37.500 0.00 0.00 0.00 3.56
8282 11611 5.748402 TCTCACAACCAGATGATAATTGCT 58.252 37.500 0.00 0.00 0.00 3.91
8283 11612 6.182627 TCTCACAACCAGATGATAATTGCTT 58.817 36.000 0.00 0.00 0.00 3.91
8284 11613 6.660521 TCTCACAACCAGATGATAATTGCTTT 59.339 34.615 0.00 0.00 0.00 3.51
8285 11614 7.177216 TCTCACAACCAGATGATAATTGCTTTT 59.823 33.333 0.00 0.00 0.00 2.27
8286 11615 7.669427 TCACAACCAGATGATAATTGCTTTTT 58.331 30.769 0.00 0.00 0.00 1.94
8287 11616 7.599621 TCACAACCAGATGATAATTGCTTTTTG 59.400 33.333 0.00 0.00 0.00 2.44
8288 11617 6.875195 ACAACCAGATGATAATTGCTTTTTGG 59.125 34.615 0.00 0.00 0.00 3.28
8289 11618 6.855763 ACCAGATGATAATTGCTTTTTGGA 57.144 33.333 0.00 0.00 0.00 3.53
8290 11619 7.243604 ACCAGATGATAATTGCTTTTTGGAA 57.756 32.000 0.00 0.00 0.00 3.53
8291 11620 7.099120 ACCAGATGATAATTGCTTTTTGGAAC 58.901 34.615 0.00 0.00 0.00 3.62
8292 11621 7.098477 CCAGATGATAATTGCTTTTTGGAACA 58.902 34.615 0.00 0.00 0.00 3.18
8293 11622 7.767198 CCAGATGATAATTGCTTTTTGGAACAT 59.233 33.333 0.00 0.00 39.30 2.71
8294 11623 9.158233 CAGATGATAATTGCTTTTTGGAACATT 57.842 29.630 0.00 0.00 39.30 2.71
8304 11633 8.948631 TGCTTTTTGGAACATTATTACAAACA 57.051 26.923 0.00 0.00 39.30 2.83
8305 11634 9.383519 TGCTTTTTGGAACATTATTACAAACAA 57.616 25.926 0.00 0.00 39.30 2.83
8323 11652 7.649057 ACAAACAAAATAAAGTAGAGAGCACC 58.351 34.615 0.00 0.00 0.00 5.01
8324 11653 7.502561 ACAAACAAAATAAAGTAGAGAGCACCT 59.497 33.333 0.00 0.00 0.00 4.00
8325 11654 7.440523 AACAAAATAAAGTAGAGAGCACCTG 57.559 36.000 0.00 0.00 0.00 4.00
8326 11655 6.769512 ACAAAATAAAGTAGAGAGCACCTGA 58.230 36.000 0.00 0.00 0.00 3.86
8327 11656 7.224297 ACAAAATAAAGTAGAGAGCACCTGAA 58.776 34.615 0.00 0.00 0.00 3.02
8328 11657 7.885399 ACAAAATAAAGTAGAGAGCACCTGAAT 59.115 33.333 0.00 0.00 0.00 2.57
8329 11658 8.734386 CAAAATAAAGTAGAGAGCACCTGAATT 58.266 33.333 0.00 0.00 0.00 2.17
8330 11659 8.499403 AAATAAAGTAGAGAGCACCTGAATTC 57.501 34.615 0.00 0.00 0.00 2.17
8331 11660 4.479786 AAGTAGAGAGCACCTGAATTCC 57.520 45.455 2.27 0.00 0.00 3.01
8332 11661 3.718723 AGTAGAGAGCACCTGAATTCCT 58.281 45.455 2.27 0.00 0.00 3.36
8333 11662 3.450457 AGTAGAGAGCACCTGAATTCCTG 59.550 47.826 2.27 0.00 0.00 3.86
8334 11663 2.544721 AGAGAGCACCTGAATTCCTGA 58.455 47.619 2.27 0.00 0.00 3.86
8335 11664 2.909006 AGAGAGCACCTGAATTCCTGAA 59.091 45.455 2.27 0.00 0.00 3.02
8336 11665 3.522750 AGAGAGCACCTGAATTCCTGAAT 59.477 43.478 2.27 0.00 0.00 2.57
8337 11666 3.876320 GAGAGCACCTGAATTCCTGAATC 59.124 47.826 2.27 0.00 0.00 2.52
8338 11667 3.522750 AGAGCACCTGAATTCCTGAATCT 59.477 43.478 2.27 0.00 0.00 2.40
8339 11668 4.018597 AGAGCACCTGAATTCCTGAATCTT 60.019 41.667 2.27 0.00 0.00 2.40
8340 11669 4.015084 AGCACCTGAATTCCTGAATCTTG 58.985 43.478 2.27 0.00 0.00 3.02
8341 11670 3.129988 GCACCTGAATTCCTGAATCTTGG 59.870 47.826 2.27 0.00 0.00 3.61
8342 11671 4.338879 CACCTGAATTCCTGAATCTTGGT 58.661 43.478 2.27 0.03 31.42 3.67
8343 11672 4.768968 CACCTGAATTCCTGAATCTTGGTT 59.231 41.667 2.27 0.00 30.01 3.67
8344 11673 5.244626 CACCTGAATTCCTGAATCTTGGTTT 59.755 40.000 2.27 0.00 30.01 3.27
8345 11674 5.840693 ACCTGAATTCCTGAATCTTGGTTTT 59.159 36.000 2.27 0.00 0.00 2.43
8346 11675 6.161381 CCTGAATTCCTGAATCTTGGTTTTG 58.839 40.000 2.27 0.00 0.00 2.44
8347 11676 6.100404 TGAATTCCTGAATCTTGGTTTTGG 57.900 37.500 2.27 0.00 0.00 3.28
8348 11677 5.837979 TGAATTCCTGAATCTTGGTTTTGGA 59.162 36.000 2.27 0.00 0.00 3.53
8349 11678 5.990120 ATTCCTGAATCTTGGTTTTGGAG 57.010 39.130 0.00 0.00 0.00 3.86
8350 11679 4.453480 TCCTGAATCTTGGTTTTGGAGT 57.547 40.909 0.00 0.00 0.00 3.85
8351 11680 5.576563 TCCTGAATCTTGGTTTTGGAGTA 57.423 39.130 0.00 0.00 0.00 2.59
8352 11681 5.947663 TCCTGAATCTTGGTTTTGGAGTAA 58.052 37.500 0.00 0.00 0.00 2.24
8353 11682 6.552008 TCCTGAATCTTGGTTTTGGAGTAAT 58.448 36.000 0.00 0.00 0.00 1.89
8354 11683 7.010160 TCCTGAATCTTGGTTTTGGAGTAATT 58.990 34.615 0.00 0.00 0.00 1.40
8355 11684 8.167392 TCCTGAATCTTGGTTTTGGAGTAATTA 58.833 33.333 0.00 0.00 0.00 1.40
8356 11685 8.462016 CCTGAATCTTGGTTTTGGAGTAATTAG 58.538 37.037 0.00 0.00 0.00 1.73
8357 11686 9.231297 CTGAATCTTGGTTTTGGAGTAATTAGA 57.769 33.333 0.00 0.00 0.00 2.10
8358 11687 9.581289 TGAATCTTGGTTTTGGAGTAATTAGAA 57.419 29.630 0.00 0.00 0.00 2.10
8360 11689 9.807921 AATCTTGGTTTTGGAGTAATTAGAAGA 57.192 29.630 0.00 0.00 0.00 2.87
8361 11690 9.807921 ATCTTGGTTTTGGAGTAATTAGAAGAA 57.192 29.630 0.00 0.00 0.00 2.52
8362 11691 9.635404 TCTTGGTTTTGGAGTAATTAGAAGAAA 57.365 29.630 0.00 0.00 0.00 2.52
8377 11706 8.860780 ATTAGAAGAAATTCTATGCTCCATCC 57.139 34.615 0.00 0.00 33.92 3.51
8378 11707 6.257994 AGAAGAAATTCTATGCTCCATCCA 57.742 37.500 0.00 0.00 0.00 3.41
8379 11708 6.850234 AGAAGAAATTCTATGCTCCATCCAT 58.150 36.000 0.00 0.00 0.00 3.41
8380 11709 6.941436 AGAAGAAATTCTATGCTCCATCCATC 59.059 38.462 0.00 0.00 0.00 3.51
8381 11710 5.568392 AGAAATTCTATGCTCCATCCATCC 58.432 41.667 0.00 0.00 0.00 3.51
8382 11711 5.074102 AGAAATTCTATGCTCCATCCATCCA 59.926 40.000 0.00 0.00 0.00 3.41
8383 11712 5.329191 AATTCTATGCTCCATCCATCCAA 57.671 39.130 0.00 0.00 0.00 3.53
8384 11713 5.531753 ATTCTATGCTCCATCCATCCAAT 57.468 39.130 0.00 0.00 0.00 3.16
8385 11714 6.647461 ATTCTATGCTCCATCCATCCAATA 57.353 37.500 0.00 0.00 0.00 1.90
8386 11715 6.452757 TTCTATGCTCCATCCATCCAATAA 57.547 37.500 0.00 0.00 0.00 1.40
8387 11716 6.647461 TCTATGCTCCATCCATCCAATAAT 57.353 37.500 0.00 0.00 0.00 1.28
8388 11717 6.656902 TCTATGCTCCATCCATCCAATAATC 58.343 40.000 0.00 0.00 0.00 1.75
8389 11718 4.727792 TGCTCCATCCATCCAATAATCA 57.272 40.909 0.00 0.00 0.00 2.57
8390 11719 5.064314 TGCTCCATCCATCCAATAATCAA 57.936 39.130 0.00 0.00 0.00 2.57
8391 11720 5.456779 TGCTCCATCCATCCAATAATCAAA 58.543 37.500 0.00 0.00 0.00 2.69
8392 11721 5.898397 TGCTCCATCCATCCAATAATCAAAA 59.102 36.000 0.00 0.00 0.00 2.44
8393 11722 6.555738 TGCTCCATCCATCCAATAATCAAAAT 59.444 34.615 0.00 0.00 0.00 1.82
8394 11723 7.071447 TGCTCCATCCATCCAATAATCAAAATT 59.929 33.333 0.00 0.00 0.00 1.82
8395 11724 7.601508 GCTCCATCCATCCAATAATCAAAATTC 59.398 37.037 0.00 0.00 0.00 2.17
8396 11725 8.550280 TCCATCCATCCAATAATCAAAATTCA 57.450 30.769 0.00 0.00 0.00 2.57
8397 11726 9.161572 TCCATCCATCCAATAATCAAAATTCAT 57.838 29.630 0.00 0.00 0.00 2.57
8398 11727 9.214957 CCATCCATCCAATAATCAAAATTCATG 57.785 33.333 0.00 0.00 0.00 3.07
8399 11728 8.717821 CATCCATCCAATAATCAAAATTCATGC 58.282 33.333 0.00 0.00 0.00 4.06
8400 11729 7.793036 TCCATCCAATAATCAAAATTCATGCA 58.207 30.769 0.00 0.00 0.00 3.96
8401 11730 8.265764 TCCATCCAATAATCAAAATTCATGCAA 58.734 29.630 0.00 0.00 0.00 4.08
8402 11731 8.339714 CCATCCAATAATCAAAATTCATGCAAC 58.660 33.333 0.00 0.00 0.00 4.17
8403 11732 7.522901 TCCAATAATCAAAATTCATGCAACG 57.477 32.000 0.00 0.00 0.00 4.10
8404 11733 7.318893 TCCAATAATCAAAATTCATGCAACGA 58.681 30.769 0.00 0.00 0.00 3.85
8405 11734 7.275341 TCCAATAATCAAAATTCATGCAACGAC 59.725 33.333 0.00 0.00 0.00 4.34
8406 11735 7.063191 CCAATAATCAAAATTCATGCAACGACA 59.937 33.333 0.00 0.00 0.00 4.35
8407 11736 5.827568 AATCAAAATTCATGCAACGACAC 57.172 34.783 0.00 0.00 0.00 3.67
8408 11737 4.298744 TCAAAATTCATGCAACGACACA 57.701 36.364 0.00 0.00 0.00 3.72
8409 11738 4.676546 TCAAAATTCATGCAACGACACAA 58.323 34.783 0.00 0.00 0.00 3.33
8410 11739 4.502282 TCAAAATTCATGCAACGACACAAC 59.498 37.500 0.00 0.00 0.00 3.32
8411 11740 2.704725 ATTCATGCAACGACACAACC 57.295 45.000 0.00 0.00 0.00 3.77
8412 11741 1.674359 TTCATGCAACGACACAACCT 58.326 45.000 0.00 0.00 0.00 3.50
8413 11742 0.943673 TCATGCAACGACACAACCTG 59.056 50.000 0.00 0.00 0.00 4.00
8414 11743 0.661187 CATGCAACGACACAACCTGC 60.661 55.000 0.00 0.00 0.00 4.85
8415 11744 1.100463 ATGCAACGACACAACCTGCA 61.100 50.000 0.00 0.00 46.20 4.41
8416 11745 1.009675 GCAACGACACAACCTGCAG 60.010 57.895 6.78 6.78 33.19 4.41
8417 11746 1.436195 GCAACGACACAACCTGCAGA 61.436 55.000 17.39 0.00 33.19 4.26
8418 11747 1.013596 CAACGACACAACCTGCAGAA 58.986 50.000 17.39 0.00 0.00 3.02
8419 11748 1.603802 CAACGACACAACCTGCAGAAT 59.396 47.619 17.39 0.00 0.00 2.40
8420 11749 1.967319 ACGACACAACCTGCAGAATT 58.033 45.000 17.39 6.30 0.00 2.17
8421 11750 2.297701 ACGACACAACCTGCAGAATTT 58.702 42.857 17.39 2.00 0.00 1.82
8422 11751 3.472652 ACGACACAACCTGCAGAATTTA 58.527 40.909 17.39 0.00 0.00 1.40
8423 11752 3.250040 ACGACACAACCTGCAGAATTTAC 59.750 43.478 17.39 0.06 0.00 2.01
8424 11753 3.249799 CGACACAACCTGCAGAATTTACA 59.750 43.478 17.39 0.00 0.00 2.41
8425 11754 4.083324 CGACACAACCTGCAGAATTTACAT 60.083 41.667 17.39 0.00 0.00 2.29
8426 11755 5.125100 ACACAACCTGCAGAATTTACATG 57.875 39.130 17.39 4.88 0.00 3.21
8427 11756 4.826733 ACACAACCTGCAGAATTTACATGA 59.173 37.500 17.39 0.00 0.00 3.07
8428 11757 5.156355 CACAACCTGCAGAATTTACATGAC 58.844 41.667 17.39 0.00 0.00 3.06
8429 11758 5.048504 CACAACCTGCAGAATTTACATGACT 60.049 40.000 17.39 0.00 0.00 3.41
8430 11759 5.048504 ACAACCTGCAGAATTTACATGACTG 60.049 40.000 17.39 0.00 0.00 3.51
8438 11767 7.878477 CAGAATTTACATGACTGCAATTTGT 57.122 32.000 0.00 0.00 0.00 2.83
8439 11768 8.969121 CAGAATTTACATGACTGCAATTTGTA 57.031 30.769 0.00 0.00 0.00 2.41
8440 11769 8.853345 CAGAATTTACATGACTGCAATTTGTAC 58.147 33.333 0.00 0.00 0.00 2.90
8441 11770 8.575589 AGAATTTACATGACTGCAATTTGTACA 58.424 29.630 0.00 0.00 0.00 2.90
8442 11771 9.190858 GAATTTACATGACTGCAATTTGTACAA 57.809 29.630 3.59 3.59 0.00 2.41
8443 11772 9.539825 AATTTACATGACTGCAATTTGTACAAA 57.460 25.926 22.58 22.58 34.46 2.83
8444 11773 8.932945 TTTACATGACTGCAATTTGTACAAAA 57.067 26.923 23.97 7.62 33.56 2.44
8445 11774 8.932945 TTACATGACTGCAATTTGTACAAAAA 57.067 26.923 23.97 3.63 33.56 1.94
8474 11803 9.886132 GAGAGGAATTAAGTAGGTTAAACATCA 57.114 33.333 0.00 0.00 34.21 3.07
8475 11804 9.892130 AGAGGAATTAAGTAGGTTAAACATCAG 57.108 33.333 0.00 0.00 34.21 2.90
8476 11805 8.507524 AGGAATTAAGTAGGTTAAACATCAGC 57.492 34.615 0.00 0.00 34.21 4.26
8477 11806 8.107095 AGGAATTAAGTAGGTTAAACATCAGCA 58.893 33.333 0.00 0.00 34.21 4.41
8478 11807 8.736244 GGAATTAAGTAGGTTAAACATCAGCAA 58.264 33.333 0.00 0.00 34.21 3.91
8481 11810 6.515272 AAGTAGGTTAAACATCAGCAATGG 57.485 37.500 0.00 0.00 39.90 3.16
8482 11811 3.874392 AGGTTAAACATCAGCAATGGC 57.126 42.857 0.00 0.00 39.90 4.40
8497 11826 5.473796 GCAATGGCTTATGGTGAATTTTG 57.526 39.130 0.00 0.00 36.96 2.44
8498 11827 5.177326 GCAATGGCTTATGGTGAATTTTGA 58.823 37.500 0.00 0.00 36.96 2.69
8499 11828 5.818857 GCAATGGCTTATGGTGAATTTTGAT 59.181 36.000 0.00 0.00 36.96 2.57
8500 11829 6.316890 GCAATGGCTTATGGTGAATTTTGATT 59.683 34.615 0.00 0.00 36.96 2.57
8501 11830 7.495279 GCAATGGCTTATGGTGAATTTTGATTA 59.505 33.333 0.00 0.00 36.96 1.75
8502 11831 9.550406 CAATGGCTTATGGTGAATTTTGATTAT 57.450 29.630 0.00 0.00 0.00 1.28
8573 11902 8.986929 ATTGAGATCTAAAAATTACCTGGAGG 57.013 34.615 0.00 0.00 42.17 4.30
8574 11903 7.749377 TGAGATCTAAAAATTACCTGGAGGA 57.251 36.000 0.00 0.00 38.94 3.71
8575 11904 7.796054 TGAGATCTAAAAATTACCTGGAGGAG 58.204 38.462 0.00 0.00 38.94 3.69
8576 11905 6.596621 AGATCTAAAAATTACCTGGAGGAGC 58.403 40.000 0.00 0.00 38.94 4.70
8577 11906 6.388394 AGATCTAAAAATTACCTGGAGGAGCT 59.612 38.462 0.00 0.00 38.94 4.09
8578 11907 6.388619 TCTAAAAATTACCTGGAGGAGCTT 57.611 37.500 0.00 0.00 38.94 3.74
8579 11908 6.415573 TCTAAAAATTACCTGGAGGAGCTTC 58.584 40.000 0.00 0.00 38.94 3.86
8580 11909 2.990066 AATTACCTGGAGGAGCTTCG 57.010 50.000 0.00 0.00 38.94 3.79
8581 11910 0.466124 ATTACCTGGAGGAGCTTCGC 59.534 55.000 0.00 0.00 38.94 4.70
8582 11911 0.614979 TTACCTGGAGGAGCTTCGCT 60.615 55.000 0.00 0.00 43.88 4.93
8583 11912 0.614979 TACCTGGAGGAGCTTCGCTT 60.615 55.000 0.00 0.00 39.88 4.68
8584 11913 1.449246 CCTGGAGGAGCTTCGCTTG 60.449 63.158 0.00 0.00 39.88 4.01
8585 11914 1.593787 CTGGAGGAGCTTCGCTTGA 59.406 57.895 0.00 0.00 39.88 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.062234 GCCGCACAACTAGTTAACATCTC 59.938 47.826 8.04 0.00 0.00 2.75
11 12 0.672401 GCCAGCCGCACAACTAGTTA 60.672 55.000 8.04 0.00 37.47 2.24
14 15 3.490759 CGCCAGCCGCACAACTAG 61.491 66.667 0.00 0.00 37.30 2.57
24 25 3.512516 GCTTGATGGTCGCCAGCC 61.513 66.667 10.82 3.72 39.46 4.85
48 49 1.600916 GAGCAAACCCGAGGCACTT 60.601 57.895 0.00 0.00 41.55 3.16
89 91 3.373565 CCTTGCTCCCGGCCAAAC 61.374 66.667 2.24 0.00 40.92 2.93
120 134 0.600255 CCGCAACTCCTCTCGTTTGT 60.600 55.000 0.00 0.00 0.00 2.83
143 157 1.878522 CGCTCCCATCGAGTTTCGG 60.879 63.158 0.00 0.00 40.88 4.30
144 158 0.867753 CTCGCTCCCATCGAGTTTCG 60.868 60.000 4.44 0.00 45.86 3.46
229 250 3.567797 GCTCGATTGCTCCACCGC 61.568 66.667 0.00 0.00 0.00 5.68
231 252 2.892425 CCGCTCGATTGCTCCACC 60.892 66.667 0.00 0.00 0.00 4.61
232 253 3.567797 GCCGCTCGATTGCTCCAC 61.568 66.667 0.00 0.00 0.00 4.02
260 281 4.856801 ACATCACCGGCCGCATCC 62.857 66.667 22.85 0.00 0.00 3.51
261 282 3.576356 CACATCACCGGCCGCATC 61.576 66.667 22.85 0.00 0.00 3.91
264 285 4.856801 ATCCACATCACCGGCCGC 62.857 66.667 22.85 0.00 0.00 6.53
265 286 2.896854 CATCCACATCACCGGCCG 60.897 66.667 21.04 21.04 0.00 6.13
266 287 2.516930 CCATCCACATCACCGGCC 60.517 66.667 0.00 0.00 0.00 6.13
267 288 2.516930 CCCATCCACATCACCGGC 60.517 66.667 0.00 0.00 0.00 6.13
268 289 2.192979 CCCCATCCACATCACCGG 59.807 66.667 0.00 0.00 0.00 5.28
269 290 2.516930 GCCCCATCCACATCACCG 60.517 66.667 0.00 0.00 0.00 4.94
270 291 0.825010 GATGCCCCATCCACATCACC 60.825 60.000 0.00 0.00 39.95 4.02
271 292 1.168407 CGATGCCCCATCCACATCAC 61.168 60.000 0.00 0.00 40.15 3.06
272 293 1.148949 CGATGCCCCATCCACATCA 59.851 57.895 0.00 0.00 40.15 3.07
273 294 1.601759 CCGATGCCCCATCCACATC 60.602 63.158 0.05 0.00 37.57 3.06
274 295 2.517414 CCGATGCCCCATCCACAT 59.483 61.111 0.05 0.00 37.57 3.21
275 296 4.504596 GCCGATGCCCCATCCACA 62.505 66.667 0.05 0.00 37.57 4.17
292 313 4.812476 TCGATTGCTCCACCGCCG 62.812 66.667 0.00 0.00 0.00 6.46
293 314 2.892425 CTCGATTGCTCCACCGCC 60.892 66.667 0.00 0.00 0.00 6.13
294 315 3.567797 GCTCGATTGCTCCACCGC 61.568 66.667 0.00 0.00 0.00 5.68
295 316 3.257561 CGCTCGATTGCTCCACCG 61.258 66.667 0.00 0.00 0.00 4.94
296 317 2.892425 CCGCTCGATTGCTCCACC 60.892 66.667 0.00 0.00 0.00 4.61
330 351 2.278596 CGTCTACATCACCGGCCG 60.279 66.667 21.04 21.04 0.00 6.13
356 383 2.125512 GCTCGATTCCACCGCTGT 60.126 61.111 0.00 0.00 0.00 4.40
358 385 3.449227 TCGCTCGATTCCACCGCT 61.449 61.111 0.00 0.00 0.00 5.52
373 400 2.704193 GAGCGTTGTTCCGTCGTCG 61.704 63.158 0.00 0.00 0.00 5.12
378 405 1.342082 CGAATCGAGCGTTGTTCCGT 61.342 55.000 0.00 0.00 0.00 4.69
379 406 1.340465 CGAATCGAGCGTTGTTCCG 59.660 57.895 0.00 0.00 0.00 4.30
384 411 2.395690 GCCACGAATCGAGCGTTG 59.604 61.111 10.55 10.90 40.44 4.10
463 532 4.451150 ATCACGTCGCACCGCCAT 62.451 61.111 0.00 0.00 0.00 4.40
474 543 1.073923 AGCCCCTTTTCTTCATCACGT 59.926 47.619 0.00 0.00 0.00 4.49
480 557 1.464722 CCCCAGCCCCTTTTCTTCA 59.535 57.895 0.00 0.00 0.00 3.02
488 565 3.620680 ATTCCTTCCCCCAGCCCCT 62.621 63.158 0.00 0.00 0.00 4.79
489 566 3.029981 ATTCCTTCCCCCAGCCCC 61.030 66.667 0.00 0.00 0.00 5.80
490 567 2.280079 CATTCCTTCCCCCAGCCC 59.720 66.667 0.00 0.00 0.00 5.19
493 570 0.394352 CGTTCCATTCCTTCCCCCAG 60.394 60.000 0.00 0.00 0.00 4.45
508 586 2.968697 AACCGCCAACCGTCGTTC 60.969 61.111 0.00 0.00 34.38 3.95
532 610 3.185594 TGAAGATGTAAAAACGTCAGCCG 59.814 43.478 0.00 0.00 44.03 5.52
538 616 4.084537 CGCTCACTGAAGATGTAAAAACGT 60.085 41.667 0.00 0.00 0.00 3.99
552 630 5.532557 CAAATATACATCTCCGCTCACTGA 58.467 41.667 0.00 0.00 0.00 3.41
560 638 4.126437 TGTGGTGCAAATATACATCTCCG 58.874 43.478 0.00 0.00 0.00 4.63
580 658 8.126700 CCGAAGATGTAAACTAAAACACTTTGT 58.873 33.333 0.00 0.00 0.00 2.83
581 659 8.339714 TCCGAAGATGTAAACTAAAACACTTTG 58.660 33.333 0.00 0.00 0.00 2.77
584 662 7.172703 CCTTCCGAAGATGTAAACTAAAACACT 59.827 37.037 9.87 0.00 0.00 3.55
585 663 7.041576 ACCTTCCGAAGATGTAAACTAAAACAC 60.042 37.037 9.87 0.00 0.00 3.32
603 681 4.469945 AGAAATTACATCTCCACCTTCCGA 59.530 41.667 0.00 0.00 0.00 4.55
610 688 8.567948 TCAACAGAAAAGAAATTACATCTCCAC 58.432 33.333 0.00 0.00 0.00 4.02
611 689 8.690203 TCAACAGAAAAGAAATTACATCTCCA 57.310 30.769 0.00 0.00 0.00 3.86
612 690 9.617975 CTTCAACAGAAAAGAAATTACATCTCC 57.382 33.333 0.00 0.00 0.00 3.71
655 747 8.777578 ATAAATAGGAAGGGGGTTATTTTCAC 57.222 34.615 0.00 0.00 30.70 3.18
666 758 6.072119 GGCGAAAATGTATAAATAGGAAGGGG 60.072 42.308 0.00 0.00 0.00 4.79
669 761 8.608844 AGAGGCGAAAATGTATAAATAGGAAG 57.391 34.615 0.00 0.00 0.00 3.46
714 806 3.583806 GACATGTGAGTTGAGAGTCCAG 58.416 50.000 1.15 0.00 0.00 3.86
715 807 2.300152 GGACATGTGAGTTGAGAGTCCA 59.700 50.000 1.15 0.00 42.65 4.02
768 860 0.572125 GCAGCGTGTTTGCTTTGAAC 59.428 50.000 0.00 0.00 44.46 3.18
844 936 1.229209 GACTGGAGGGAGGTGGTCA 60.229 63.158 0.00 0.00 0.00 4.02
845 937 1.990614 GGACTGGAGGGAGGTGGTC 60.991 68.421 0.00 0.00 0.00 4.02
847 939 1.687493 GAGGACTGGAGGGAGGTGG 60.687 68.421 0.00 0.00 0.00 4.61
849 941 2.360980 CGAGGACTGGAGGGAGGT 59.639 66.667 0.00 0.00 0.00 3.85
850 942 3.151022 GCGAGGACTGGAGGGAGG 61.151 72.222 0.00 0.00 0.00 4.30
852 944 4.779733 GGGCGAGGACTGGAGGGA 62.780 72.222 0.00 0.00 0.00 4.20
857 949 3.952628 GAAACGGGGCGAGGACTGG 62.953 68.421 0.00 0.00 0.00 4.00
858 950 2.434359 GAAACGGGGCGAGGACTG 60.434 66.667 0.00 0.00 0.00 3.51
859 951 3.703127 GGAAACGGGGCGAGGACT 61.703 66.667 0.00 0.00 0.00 3.85
920 1012 2.359967 GGAGGAGGACTTCGTGGGG 61.360 68.421 0.00 0.00 0.00 4.96
1229 1351 4.867047 TCAAAATTCAGAGAGATCTCACGC 59.133 41.667 24.39 12.91 45.21 5.34
1284 1406 1.176619 GGGGTTTCAAACTGGACCGG 61.177 60.000 0.00 0.00 32.91 5.28
1288 1410 0.109723 CTCCGGGGTTTCAAACTGGA 59.890 55.000 0.00 4.95 0.00 3.86
1364 1486 4.530857 CCCGCGAGATCACCACCC 62.531 72.222 8.23 0.00 0.00 4.61
1365 1487 4.530857 CCCCGCGAGATCACCACC 62.531 72.222 8.23 0.00 0.00 4.61
1445 1572 2.311124 ATTGGTACGAACTAGCAGCC 57.689 50.000 0.00 0.00 34.32 4.85
1470 1597 2.159254 GCAATGCACCCACAATAATCGT 60.159 45.455 0.00 0.00 0.00 3.73
1498 1625 1.640428 CGCGTGGATTAGAGAAGCAA 58.360 50.000 0.00 0.00 0.00 3.91
1557 1686 0.459237 GCTGGACTCAGGACGTGATG 60.459 60.000 0.00 0.00 41.19 3.07
1587 1718 3.070015 CCACATCCCAAATAAATGGCCTC 59.930 47.826 3.32 0.00 39.26 4.70
1588 1719 3.040477 CCACATCCCAAATAAATGGCCT 58.960 45.455 3.32 0.00 39.26 5.19
1589 1720 3.037549 TCCACATCCCAAATAAATGGCC 58.962 45.455 0.00 0.00 39.26 5.36
1610 1741 6.127101 TCTGATTCATCATTCATCAAGGCTT 58.873 36.000 0.00 0.00 36.02 4.35
1688 1821 7.880160 TTAGTAATGATGCATGTTTAGGCTT 57.120 32.000 2.46 0.00 34.05 4.35
1842 1979 5.178096 TCAAAGCTCCATAGATTCCACAA 57.822 39.130 0.00 0.00 29.07 3.33
2028 2169 3.133721 ACAGTTGATCATCCTACCTGCTC 59.866 47.826 0.00 0.00 0.00 4.26
2052 2193 9.520515 ACATCCAACTAAAAGTATGATTCAGTT 57.479 29.630 0.00 0.00 0.00 3.16
2464 2605 3.018856 CCTATCAAACTGCAGGCATTCA 58.981 45.455 19.93 0.00 0.00 2.57
2470 2611 5.998454 CAGTATTCCTATCAAACTGCAGG 57.002 43.478 19.93 0.00 32.02 4.85
2515 2656 2.452600 AAACAACCCCACATGTCACT 57.547 45.000 0.00 0.00 0.00 3.41
2667 2808 4.378770 GCCGCCTCAAATATGATGTATGTG 60.379 45.833 0.00 0.00 34.37 3.21
2759 2900 5.803461 CCATACAAAATGCTCTTGTCACATG 59.197 40.000 0.00 0.00 38.05 3.21
2784 4627 5.183904 GGTCTTATTGTGTGGCTTTCAGAAT 59.816 40.000 0.00 0.00 34.19 2.40
2795 4638 4.271049 CAGATTAGCGGGTCTTATTGTGTG 59.729 45.833 0.00 0.00 0.00 3.82
3092 4969 3.470888 CCAGTACCAGGAGGCCCG 61.471 72.222 0.00 0.00 39.06 6.13
3186 5063 8.549338 AGAAAAGTAACAAAGCTATACTCCAC 57.451 34.615 0.00 0.00 0.00 4.02
3271 5873 7.798071 TCATAAATTCGTACAGGATAAAGGGT 58.202 34.615 0.00 0.00 0.00 4.34
3301 5903 4.090354 CGTCAAGCCTGCATTTTAAATGTG 59.910 41.667 17.51 11.23 0.00 3.21
3323 5925 5.396362 CACTGCTGATAACAACAAAACTTCG 59.604 40.000 0.00 0.00 0.00 3.79
3376 6438 9.586435 ACTTAAAACAAGAGAATTGAAAACTGG 57.414 29.630 0.00 0.00 0.00 4.00
3564 6627 5.251700 ACAATCTGAGGTCAGGAAAAGGTAT 59.748 40.000 7.14 0.00 43.91 2.73
3764 6830 4.160439 GGTCACTATGATCACCTGTGAGAA 59.840 45.833 20.51 4.71 43.61 2.87
3765 6831 3.701542 GGTCACTATGATCACCTGTGAGA 59.298 47.826 20.51 5.24 43.61 3.27
3780 6846 8.106462 TCAAAAATGATAACATGGAGGTCACTA 58.894 33.333 0.00 0.00 36.79 2.74
4015 7087 1.480545 ACACTGTCACAGCACACACTA 59.519 47.619 4.13 0.00 34.37 2.74
4253 7325 6.002704 TGCAGGTTGGCAATTTTGAATAAAT 58.997 32.000 1.92 0.00 41.65 1.40
4280 7352 4.232221 GCACAACCAGAGTTTCATCAATG 58.768 43.478 0.00 0.00 32.45 2.82
4313 7385 2.035321 GCCTGTACCATCTCTGCTAGAC 59.965 54.545 0.00 0.00 36.93 2.59
4780 7861 0.449388 CTCTTTGTGAATCGCCCAGC 59.551 55.000 0.00 0.00 0.00 4.85
4829 7910 9.593565 AAGAGAATATGGTGTAGTCATCTATCA 57.406 33.333 0.00 0.00 0.00 2.15
4858 7939 9.078990 TGAAGAGTAGAACAGAAATGAACTAGA 57.921 33.333 0.00 0.00 0.00 2.43
4880 7961 7.944061 TCAAAGGGCAATGAATATATGTGAAG 58.056 34.615 0.00 0.00 0.00 3.02
5071 8152 2.032054 ACAAATGCCGCAGACAATATCG 59.968 45.455 0.00 0.00 0.00 2.92
5072 8153 3.181497 ACACAAATGCCGCAGACAATATC 60.181 43.478 0.00 0.00 0.00 1.63
5119 8200 4.255833 TGAAATGGCCAGCTAAAAACAG 57.744 40.909 13.05 0.00 0.00 3.16
5487 8573 2.939103 CCTTAATGCTTTCCTCGTCCAG 59.061 50.000 0.00 0.00 0.00 3.86
5775 8861 3.025978 CCCTGAATTGCTGCATTAAGGA 58.974 45.455 20.73 1.72 0.00 3.36
5886 8972 4.107622 CAAGCTATAAGCATGTGGTTTGC 58.892 43.478 2.53 6.09 45.56 3.68
5995 9155 8.594881 AAATTGTAGTAACTGAGACAACTGAG 57.405 34.615 0.00 0.00 34.80 3.35
6055 9216 2.415893 GCCACAGTCAACAATACCATGC 60.416 50.000 0.00 0.00 0.00 4.06
6187 9348 7.375834 ACAACGATGATGTGTTTTAGAGACTA 58.624 34.615 0.00 0.00 0.00 2.59
6532 9694 3.412386 ACACAGGAGCAATAAACAGGAC 58.588 45.455 0.00 0.00 0.00 3.85
6741 9904 3.600388 AGGAGCACCAAAGAATACTTCG 58.400 45.455 2.07 0.00 38.94 3.79
6986 10149 6.872920 TGTTCCAATAACAAGCAAGTTCTTT 58.127 32.000 0.00 0.00 33.07 2.52
7049 10212 0.683412 AGGTTACCGAGAACACACCC 59.317 55.000 0.00 0.00 0.00 4.61
7130 10294 7.831690 TCTTGCATTTTAACCATAGACCATACA 59.168 33.333 0.00 0.00 0.00 2.29
7131 10295 8.129211 GTCTTGCATTTTAACCATAGACCATAC 58.871 37.037 0.00 0.00 0.00 2.39
7133 10297 6.663093 TGTCTTGCATTTTAACCATAGACCAT 59.337 34.615 5.63 0.00 31.99 3.55
7134 10298 6.007076 TGTCTTGCATTTTAACCATAGACCA 58.993 36.000 5.63 0.00 31.99 4.02
7157 10322 3.242903 TGCAATGTGAAACGGTTACAGTG 60.243 43.478 15.93 15.93 42.39 3.66
7215 10495 8.108999 TGCAAGGCCATAGAATATGTATTACAT 58.891 33.333 13.57 13.57 42.35 2.29
7254 10535 7.363007 GGCGATCATATAAGGTTGATACAGAGA 60.363 40.741 0.00 0.00 32.84 3.10
7313 10594 2.009042 GCTGTCTCAACATCCCCTTCG 61.009 57.143 0.00 0.00 34.13 3.79
7319 10600 1.085091 CTGCTGCTGTCTCAACATCC 58.915 55.000 0.00 0.00 34.13 3.51
7401 10682 8.261522 GGGTTGTAAGAATTTGGGCAAATATAA 58.738 33.333 0.00 0.00 39.88 0.98
7592 10873 1.964933 GCCTAGGGTCCTCAGATGTAC 59.035 57.143 11.72 0.00 0.00 2.90
7647 10928 1.065126 ACCCTGTGAAGATAGCAAGCC 60.065 52.381 0.00 0.00 0.00 4.35
7677 10958 1.153147 GAAAGGCCACTCGGGATCC 60.153 63.158 5.01 1.92 40.01 3.36
7729 11010 8.323854 CAGAATATTTATATCGACGGAAGCATG 58.676 37.037 0.00 0.00 0.00 4.06
7823 11104 2.431782 ACCCATTCACCAAATAGCATGC 59.568 45.455 10.51 10.51 0.00 4.06
7841 11122 2.304761 TCCCTAGTCATCAACAACACCC 59.695 50.000 0.00 0.00 0.00 4.61
7880 11161 3.502211 ACCAAACTCTAAAAGCACATCCG 59.498 43.478 0.00 0.00 0.00 4.18
7907 11188 9.851686 ATGAAACTGCCAACTTATCTATATCAA 57.148 29.630 0.00 0.00 0.00 2.57
7908 11189 9.494271 GATGAAACTGCCAACTTATCTATATCA 57.506 33.333 0.00 0.00 0.00 2.15
7909 11190 9.717942 AGATGAAACTGCCAACTTATCTATATC 57.282 33.333 0.00 0.00 0.00 1.63
7981 11262 3.449746 AACAAGCAGGCAACCCTTATA 57.550 42.857 0.00 0.00 40.33 0.98
7982 11263 2.309136 AACAAGCAGGCAACCCTTAT 57.691 45.000 0.00 0.00 40.33 1.73
8018 11299 2.095263 GCGGTATCAACAAACATGCAGT 60.095 45.455 0.00 0.00 0.00 4.40
8019 11300 2.095314 TGCGGTATCAACAAACATGCAG 60.095 45.455 0.00 0.00 0.00 4.41
8038 11326 4.531332 TGCACTTTTGTTTGTTTGTTTGC 58.469 34.783 0.00 0.00 0.00 3.68
8041 11329 6.311055 ACAATGCACTTTTGTTTGTTTGTT 57.689 29.167 0.00 0.00 33.64 2.83
8042 11330 5.938438 ACAATGCACTTTTGTTTGTTTGT 57.062 30.435 0.00 0.00 33.64 2.83
8044 11332 6.348376 CCTGAACAATGCACTTTTGTTTGTTT 60.348 34.615 15.93 0.00 44.90 2.83
8120 11449 2.456287 CTAAGATGCTAGGGCCGGCC 62.456 65.000 38.57 38.57 37.74 6.13
8121 11450 1.004440 CTAAGATGCTAGGGCCGGC 60.004 63.158 21.18 21.18 37.74 6.13
8122 11451 0.605589 CTCTAAGATGCTAGGGCCGG 59.394 60.000 0.00 0.00 37.74 6.13
8123 11452 0.605589 CCTCTAAGATGCTAGGGCCG 59.394 60.000 0.00 0.00 37.74 6.13
8124 11453 0.323302 GCCTCTAAGATGCTAGGGCC 59.677 60.000 0.00 0.00 37.74 5.80
8125 11454 0.323302 GGCCTCTAAGATGCTAGGGC 59.677 60.000 0.00 0.00 45.93 5.19
8126 11455 0.980423 GGGCCTCTAAGATGCTAGGG 59.020 60.000 0.84 0.00 0.00 3.53
8127 11456 2.022718 AGGGCCTCTAAGATGCTAGG 57.977 55.000 0.00 0.00 0.00 3.02
8128 11457 2.703007 ACAAGGGCCTCTAAGATGCTAG 59.297 50.000 6.46 0.00 0.00 3.42
8129 11458 2.435805 CACAAGGGCCTCTAAGATGCTA 59.564 50.000 6.46 0.00 0.00 3.49
8130 11459 1.211457 CACAAGGGCCTCTAAGATGCT 59.789 52.381 6.46 0.00 0.00 3.79
8131 11460 1.673168 CACAAGGGCCTCTAAGATGC 58.327 55.000 6.46 0.00 0.00 3.91
8132 11461 1.673168 GCACAAGGGCCTCTAAGATG 58.327 55.000 6.46 2.06 0.00 2.90
8133 11462 0.179000 CGCACAAGGGCCTCTAAGAT 59.821 55.000 6.46 0.00 0.00 2.40
8134 11463 0.902984 TCGCACAAGGGCCTCTAAGA 60.903 55.000 6.46 0.00 0.00 2.10
8135 11464 0.460987 CTCGCACAAGGGCCTCTAAG 60.461 60.000 6.46 0.00 0.00 2.18
8136 11465 1.192146 ACTCGCACAAGGGCCTCTAA 61.192 55.000 6.46 0.00 0.00 2.10
8137 11466 1.192146 AACTCGCACAAGGGCCTCTA 61.192 55.000 6.46 0.00 0.00 2.43
8138 11467 2.056906 AAACTCGCACAAGGGCCTCT 62.057 55.000 6.46 0.00 0.00 3.69
8139 11468 1.578206 GAAACTCGCACAAGGGCCTC 61.578 60.000 6.46 0.00 0.00 4.70
8140 11469 1.600916 GAAACTCGCACAAGGGCCT 60.601 57.895 0.00 0.00 0.00 5.19
8141 11470 1.244019 ATGAAACTCGCACAAGGGCC 61.244 55.000 0.00 0.00 0.00 5.80
8142 11471 1.448985 TATGAAACTCGCACAAGGGC 58.551 50.000 0.00 0.00 0.00 5.19
8143 11472 5.277974 CCATTATATGAAACTCGCACAAGGG 60.278 44.000 0.00 0.00 0.00 3.95
8144 11473 5.277974 CCCATTATATGAAACTCGCACAAGG 60.278 44.000 0.00 0.00 0.00 3.61
8145 11474 5.751680 CCCATTATATGAAACTCGCACAAG 58.248 41.667 0.00 0.00 0.00 3.16
8146 11475 4.036262 GCCCATTATATGAAACTCGCACAA 59.964 41.667 0.00 0.00 0.00 3.33
8147 11476 3.563808 GCCCATTATATGAAACTCGCACA 59.436 43.478 0.00 0.00 0.00 4.57
8148 11477 3.058224 GGCCCATTATATGAAACTCGCAC 60.058 47.826 0.00 0.00 0.00 5.34
8149 11478 3.146066 GGCCCATTATATGAAACTCGCA 58.854 45.455 0.00 0.00 0.00 5.10
8150 11479 2.488153 GGGCCCATTATATGAAACTCGC 59.512 50.000 19.95 0.00 0.00 5.03
8151 11480 4.021102 AGGGCCCATTATATGAAACTCG 57.979 45.455 27.56 0.00 0.00 4.18
8152 11481 9.700831 ATTATAAGGGCCCATTATATGAAACTC 57.299 33.333 27.56 0.00 0.00 3.01
8157 11486 9.744125 AGTCTATTATAAGGGCCCATTATATGA 57.256 33.333 27.56 19.73 0.00 2.15
8159 11488 9.744125 TGAGTCTATTATAAGGGCCCATTATAT 57.256 33.333 27.56 18.10 0.00 0.86
8160 11489 9.569074 TTGAGTCTATTATAAGGGCCCATTATA 57.431 33.333 27.56 23.20 0.00 0.98
8161 11490 8.463055 TTGAGTCTATTATAAGGGCCCATTAT 57.537 34.615 27.56 24.18 0.00 1.28
8162 11491 7.881912 TTGAGTCTATTATAAGGGCCCATTA 57.118 36.000 27.56 19.29 0.00 1.90
8163 11492 6.780198 TTGAGTCTATTATAAGGGCCCATT 57.220 37.500 27.56 17.66 0.00 3.16
8164 11493 6.780198 TTTGAGTCTATTATAAGGGCCCAT 57.220 37.500 27.56 16.50 0.00 4.00
8165 11494 6.780198 ATTTGAGTCTATTATAAGGGCCCA 57.220 37.500 27.56 3.72 0.00 5.36
8166 11495 7.505923 ACAAATTTGAGTCTATTATAAGGGCCC 59.494 37.037 24.64 16.46 0.00 5.80
8167 11496 8.465273 ACAAATTTGAGTCTATTATAAGGGCC 57.535 34.615 24.64 0.00 0.00 5.80
8168 11497 9.736023 CAACAAATTTGAGTCTATTATAAGGGC 57.264 33.333 24.64 0.00 0.00 5.19
8181 11510 7.169982 CGTTCTAGACTCTCAACAAATTTGAGT 59.830 37.037 24.64 15.99 44.58 3.41
8182 11511 7.169982 ACGTTCTAGACTCTCAACAAATTTGAG 59.830 37.037 24.64 15.53 45.38 3.02
8183 11512 6.984474 ACGTTCTAGACTCTCAACAAATTTGA 59.016 34.615 24.64 1.42 0.00 2.69
8184 11513 7.178712 ACGTTCTAGACTCTCAACAAATTTG 57.821 36.000 16.67 16.67 0.00 2.32
8185 11514 7.116519 GCTACGTTCTAGACTCTCAACAAATTT 59.883 37.037 0.00 0.00 0.00 1.82
8186 11515 6.586844 GCTACGTTCTAGACTCTCAACAAATT 59.413 38.462 0.00 0.00 0.00 1.82
8187 11516 6.094061 GCTACGTTCTAGACTCTCAACAAAT 58.906 40.000 0.00 0.00 0.00 2.32
8188 11517 5.009310 TGCTACGTTCTAGACTCTCAACAAA 59.991 40.000 0.00 0.00 0.00 2.83
8189 11518 4.517832 TGCTACGTTCTAGACTCTCAACAA 59.482 41.667 0.00 0.00 0.00 2.83
8190 11519 4.070009 TGCTACGTTCTAGACTCTCAACA 58.930 43.478 0.00 0.00 0.00 3.33
8191 11520 4.405196 GTGCTACGTTCTAGACTCTCAAC 58.595 47.826 0.00 0.00 0.00 3.18
8192 11521 3.439476 GGTGCTACGTTCTAGACTCTCAA 59.561 47.826 0.00 0.00 0.00 3.02
8193 11522 3.008330 GGTGCTACGTTCTAGACTCTCA 58.992 50.000 0.00 0.00 0.00 3.27
8194 11523 2.030701 CGGTGCTACGTTCTAGACTCTC 59.969 54.545 0.00 0.00 0.00 3.20
8195 11524 2.008329 CGGTGCTACGTTCTAGACTCT 58.992 52.381 0.00 0.00 0.00 3.24
8196 11525 1.736681 ACGGTGCTACGTTCTAGACTC 59.263 52.381 0.00 0.00 46.25 3.36
8197 11526 1.818642 ACGGTGCTACGTTCTAGACT 58.181 50.000 0.00 0.00 46.25 3.24
8203 11532 9.617366 ATCAAATCTGAAAACGGTGCTACGTTC 62.617 40.741 16.86 8.44 43.29 3.95
8204 11533 7.946737 ATCAAATCTGAAAACGGTGCTACGTT 61.947 38.462 12.11 12.11 45.19 3.99
8205 11534 6.538183 ATCAAATCTGAAAACGGTGCTACGT 61.538 40.000 0.00 0.00 41.41 3.57
8206 11535 3.185594 TCAAATCTGAAAACGGTGCTACG 59.814 43.478 0.00 0.00 40.31 3.51
8207 11536 4.742438 TCAAATCTGAAAACGGTGCTAC 57.258 40.909 0.00 0.00 0.00 3.58
8208 11537 5.957842 AATCAAATCTGAAAACGGTGCTA 57.042 34.783 0.00 0.00 34.49 3.49
8209 11538 4.853924 AATCAAATCTGAAAACGGTGCT 57.146 36.364 0.00 0.00 34.49 4.40
8210 11539 7.328249 TCAATTAATCAAATCTGAAAACGGTGC 59.672 33.333 0.00 0.00 34.49 5.01
8211 11540 8.741101 TCAATTAATCAAATCTGAAAACGGTG 57.259 30.769 0.00 0.00 34.49 4.94
8212 11541 9.927668 AATCAATTAATCAAATCTGAAAACGGT 57.072 25.926 0.00 0.00 34.49 4.83
8237 11566 9.233649 TGAGAAAAGGAAACACTAACTTGTAAA 57.766 29.630 0.00 0.00 0.00 2.01
8238 11567 8.671028 GTGAGAAAAGGAAACACTAACTTGTAA 58.329 33.333 0.00 0.00 0.00 2.41
8239 11568 7.825270 TGTGAGAAAAGGAAACACTAACTTGTA 59.175 33.333 0.00 0.00 33.41 2.41
8240 11569 6.657541 TGTGAGAAAAGGAAACACTAACTTGT 59.342 34.615 0.00 0.00 33.41 3.16
8241 11570 7.083875 TGTGAGAAAAGGAAACACTAACTTG 57.916 36.000 0.00 0.00 33.41 3.16
8242 11571 7.362660 GGTTGTGAGAAAAGGAAACACTAACTT 60.363 37.037 0.00 0.00 33.41 2.66
8243 11572 6.095021 GGTTGTGAGAAAAGGAAACACTAACT 59.905 38.462 0.00 0.00 33.41 2.24
8244 11573 6.127842 TGGTTGTGAGAAAAGGAAACACTAAC 60.128 38.462 0.00 0.00 33.41 2.34
8245 11574 5.946972 TGGTTGTGAGAAAAGGAAACACTAA 59.053 36.000 0.00 0.00 33.41 2.24
8246 11575 5.502079 TGGTTGTGAGAAAAGGAAACACTA 58.498 37.500 0.00 0.00 33.41 2.74
8247 11576 4.340617 TGGTTGTGAGAAAAGGAAACACT 58.659 39.130 0.00 0.00 33.41 3.55
8248 11577 4.398044 TCTGGTTGTGAGAAAAGGAAACAC 59.602 41.667 0.00 0.00 0.00 3.32
8249 11578 4.594970 TCTGGTTGTGAGAAAAGGAAACA 58.405 39.130 0.00 0.00 0.00 2.83
8250 11579 5.299279 TCATCTGGTTGTGAGAAAAGGAAAC 59.701 40.000 0.00 0.00 0.00 2.78
8251 11580 5.445069 TCATCTGGTTGTGAGAAAAGGAAA 58.555 37.500 0.00 0.00 0.00 3.13
8252 11581 5.047566 TCATCTGGTTGTGAGAAAAGGAA 57.952 39.130 0.00 0.00 0.00 3.36
8253 11582 4.705110 TCATCTGGTTGTGAGAAAAGGA 57.295 40.909 0.00 0.00 0.00 3.36
8254 11583 7.636150 ATTATCATCTGGTTGTGAGAAAAGG 57.364 36.000 0.00 0.00 30.44 3.11
8255 11584 7.487189 GCAATTATCATCTGGTTGTGAGAAAAG 59.513 37.037 0.00 0.00 30.44 2.27
8256 11585 7.177216 AGCAATTATCATCTGGTTGTGAGAAAA 59.823 33.333 0.00 0.00 30.44 2.29
8257 11586 6.660521 AGCAATTATCATCTGGTTGTGAGAAA 59.339 34.615 0.00 0.00 30.44 2.52
8258 11587 6.182627 AGCAATTATCATCTGGTTGTGAGAA 58.817 36.000 0.00 0.00 31.11 2.87
8259 11588 5.748402 AGCAATTATCATCTGGTTGTGAGA 58.252 37.500 0.00 0.00 0.00 3.27
8260 11589 6.446781 AAGCAATTATCATCTGGTTGTGAG 57.553 37.500 0.00 0.00 30.06 3.51
8261 11590 6.839124 AAAGCAATTATCATCTGGTTGTGA 57.161 33.333 0.00 0.00 31.55 3.58
8262 11591 7.148540 CCAAAAAGCAATTATCATCTGGTTGTG 60.149 37.037 0.00 0.00 31.55 3.33
8263 11592 6.875195 CCAAAAAGCAATTATCATCTGGTTGT 59.125 34.615 0.00 0.00 31.55 3.32
8264 11593 7.098477 TCCAAAAAGCAATTATCATCTGGTTG 58.902 34.615 0.00 0.00 31.55 3.77
8265 11594 7.243604 TCCAAAAAGCAATTATCATCTGGTT 57.756 32.000 0.00 0.00 32.42 3.67
8266 11595 6.855763 TCCAAAAAGCAATTATCATCTGGT 57.144 33.333 0.00 0.00 0.00 4.00
8267 11596 7.098477 TGTTCCAAAAAGCAATTATCATCTGG 58.902 34.615 0.00 0.00 0.00 3.86
8268 11597 8.712285 ATGTTCCAAAAAGCAATTATCATCTG 57.288 30.769 0.00 0.00 0.00 2.90
8278 11607 9.383519 TGTTTGTAATAATGTTCCAAAAAGCAA 57.616 25.926 0.00 0.00 0.00 3.91
8279 11608 8.948631 TGTTTGTAATAATGTTCCAAAAAGCA 57.051 26.923 0.00 0.00 0.00 3.91
8297 11626 8.780249 GGTGCTCTCTACTTTATTTTGTTTGTA 58.220 33.333 0.00 0.00 0.00 2.41
8298 11627 7.502561 AGGTGCTCTCTACTTTATTTTGTTTGT 59.497 33.333 0.00 0.00 0.00 2.83
8299 11628 7.805071 CAGGTGCTCTCTACTTTATTTTGTTTG 59.195 37.037 0.00 0.00 0.00 2.93
8300 11629 7.719633 TCAGGTGCTCTCTACTTTATTTTGTTT 59.280 33.333 0.00 0.00 0.00 2.83
8301 11630 7.224297 TCAGGTGCTCTCTACTTTATTTTGTT 58.776 34.615 0.00 0.00 0.00 2.83
8302 11631 6.769512 TCAGGTGCTCTCTACTTTATTTTGT 58.230 36.000 0.00 0.00 0.00 2.83
8303 11632 7.672983 TTCAGGTGCTCTCTACTTTATTTTG 57.327 36.000 0.00 0.00 0.00 2.44
8304 11633 8.870075 AATTCAGGTGCTCTCTACTTTATTTT 57.130 30.769 0.00 0.00 0.00 1.82
8305 11634 7.554476 GGAATTCAGGTGCTCTCTACTTTATTT 59.446 37.037 7.93 0.00 0.00 1.40
8306 11635 7.051000 GGAATTCAGGTGCTCTCTACTTTATT 58.949 38.462 7.93 0.00 0.00 1.40
8307 11636 6.385467 AGGAATTCAGGTGCTCTCTACTTTAT 59.615 38.462 7.93 0.00 0.00 1.40
8308 11637 5.721960 AGGAATTCAGGTGCTCTCTACTTTA 59.278 40.000 7.93 0.00 0.00 1.85
8309 11638 4.534103 AGGAATTCAGGTGCTCTCTACTTT 59.466 41.667 7.93 0.00 0.00 2.66
8310 11639 4.081198 CAGGAATTCAGGTGCTCTCTACTT 60.081 45.833 7.93 0.00 0.00 2.24
8311 11640 3.450457 CAGGAATTCAGGTGCTCTCTACT 59.550 47.826 7.93 0.00 0.00 2.57
8312 11641 3.449018 TCAGGAATTCAGGTGCTCTCTAC 59.551 47.826 7.93 0.00 0.00 2.59
8313 11642 3.713003 TCAGGAATTCAGGTGCTCTCTA 58.287 45.455 7.93 0.00 0.00 2.43
8314 11643 2.544721 TCAGGAATTCAGGTGCTCTCT 58.455 47.619 7.93 0.00 0.00 3.10
8315 11644 3.340814 TTCAGGAATTCAGGTGCTCTC 57.659 47.619 7.93 0.00 0.00 3.20
8316 11645 3.522750 AGATTCAGGAATTCAGGTGCTCT 59.477 43.478 7.93 4.78 0.00 4.09
8317 11646 3.883669 AGATTCAGGAATTCAGGTGCTC 58.116 45.455 7.93 2.84 0.00 4.26
8318 11647 4.015084 CAAGATTCAGGAATTCAGGTGCT 58.985 43.478 7.93 0.00 0.00 4.40
8319 11648 3.129988 CCAAGATTCAGGAATTCAGGTGC 59.870 47.826 7.93 0.00 0.00 5.01
8320 11649 4.338879 ACCAAGATTCAGGAATTCAGGTG 58.661 43.478 7.93 1.69 31.64 4.00
8321 11650 4.664688 ACCAAGATTCAGGAATTCAGGT 57.335 40.909 7.93 2.48 0.00 4.00
8322 11651 5.990120 AAACCAAGATTCAGGAATTCAGG 57.010 39.130 7.93 0.00 0.00 3.86
8323 11652 6.015180 TCCAAAACCAAGATTCAGGAATTCAG 60.015 38.462 7.93 0.00 0.00 3.02
8324 11653 5.837979 TCCAAAACCAAGATTCAGGAATTCA 59.162 36.000 7.93 0.00 0.00 2.57
8325 11654 6.015095 ACTCCAAAACCAAGATTCAGGAATTC 60.015 38.462 0.00 0.00 0.00 2.17
8326 11655 5.840693 ACTCCAAAACCAAGATTCAGGAATT 59.159 36.000 2.58 0.00 0.00 2.17
8327 11656 5.397360 ACTCCAAAACCAAGATTCAGGAAT 58.603 37.500 0.00 0.00 0.00 3.01
8328 11657 4.803452 ACTCCAAAACCAAGATTCAGGAA 58.197 39.130 2.58 0.00 0.00 3.36
8329 11658 4.453480 ACTCCAAAACCAAGATTCAGGA 57.547 40.909 2.58 0.00 0.00 3.86
8330 11659 6.840780 ATTACTCCAAAACCAAGATTCAGG 57.159 37.500 0.00 0.00 0.00 3.86
8331 11660 9.231297 TCTAATTACTCCAAAACCAAGATTCAG 57.769 33.333 0.00 0.00 0.00 3.02
8332 11661 9.581289 TTCTAATTACTCCAAAACCAAGATTCA 57.419 29.630 0.00 0.00 0.00 2.57
8334 11663 9.807921 TCTTCTAATTACTCCAAAACCAAGATT 57.192 29.630 0.00 0.00 0.00 2.40
8335 11664 9.807921 TTCTTCTAATTACTCCAAAACCAAGAT 57.192 29.630 0.00 0.00 0.00 2.40
8336 11665 9.635404 TTTCTTCTAATTACTCCAAAACCAAGA 57.365 29.630 0.00 0.00 0.00 3.02
8351 11680 9.294614 GGATGGAGCATAGAATTTCTTCTAATT 57.705 33.333 3.86 0.00 44.91 1.40
8352 11681 8.443176 TGGATGGAGCATAGAATTTCTTCTAAT 58.557 33.333 3.86 0.00 44.91 1.73
8353 11682 7.805163 TGGATGGAGCATAGAATTTCTTCTAA 58.195 34.615 3.86 0.00 44.91 2.10
8354 11683 7.379059 TGGATGGAGCATAGAATTTCTTCTA 57.621 36.000 3.86 0.00 45.61 2.10
8355 11684 6.257994 TGGATGGAGCATAGAATTTCTTCT 57.742 37.500 3.86 0.23 44.06 2.85
8356 11685 6.150809 GGATGGATGGAGCATAGAATTTCTTC 59.849 42.308 3.86 0.00 0.00 2.87
8357 11686 6.008960 GGATGGATGGAGCATAGAATTTCTT 58.991 40.000 3.86 0.00 0.00 2.52
8358 11687 5.074102 TGGATGGATGGAGCATAGAATTTCT 59.926 40.000 4.03 4.03 0.00 2.52
8359 11688 5.319453 TGGATGGATGGAGCATAGAATTTC 58.681 41.667 0.00 0.00 0.00 2.17
8360 11689 5.329191 TGGATGGATGGAGCATAGAATTT 57.671 39.130 0.00 0.00 0.00 1.82
8361 11690 5.329191 TTGGATGGATGGAGCATAGAATT 57.671 39.130 0.00 0.00 0.00 2.17
8362 11691 5.531753 ATTGGATGGATGGAGCATAGAAT 57.468 39.130 0.00 0.00 0.00 2.40
8363 11692 6.452757 TTATTGGATGGATGGAGCATAGAA 57.547 37.500 0.00 0.00 0.00 2.10
8364 11693 6.216046 TGATTATTGGATGGATGGAGCATAGA 59.784 38.462 0.00 0.00 0.00 1.98
8365 11694 6.420638 TGATTATTGGATGGATGGAGCATAG 58.579 40.000 0.00 0.00 0.00 2.23
8366 11695 6.391479 TGATTATTGGATGGATGGAGCATA 57.609 37.500 0.00 0.00 0.00 3.14
8367 11696 5.265290 TGATTATTGGATGGATGGAGCAT 57.735 39.130 0.00 0.00 0.00 3.79
8368 11697 4.727792 TGATTATTGGATGGATGGAGCA 57.272 40.909 0.00 0.00 0.00 4.26
8369 11698 6.409524 TTTTGATTATTGGATGGATGGAGC 57.590 37.500 0.00 0.00 0.00 4.70
8370 11699 8.644216 TGAATTTTGATTATTGGATGGATGGAG 58.356 33.333 0.00 0.00 0.00 3.86
8371 11700 8.550280 TGAATTTTGATTATTGGATGGATGGA 57.450 30.769 0.00 0.00 0.00 3.41
8372 11701 9.214957 CATGAATTTTGATTATTGGATGGATGG 57.785 33.333 0.00 0.00 0.00 3.51
8373 11702 8.717821 GCATGAATTTTGATTATTGGATGGATG 58.282 33.333 0.00 0.00 0.00 3.51
8374 11703 8.433599 TGCATGAATTTTGATTATTGGATGGAT 58.566 29.630 0.00 0.00 0.00 3.41
8375 11704 7.793036 TGCATGAATTTTGATTATTGGATGGA 58.207 30.769 0.00 0.00 0.00 3.41
8376 11705 8.339714 GTTGCATGAATTTTGATTATTGGATGG 58.660 33.333 0.00 0.00 0.00 3.51
8377 11706 8.059502 CGTTGCATGAATTTTGATTATTGGATG 58.940 33.333 0.00 0.00 0.00 3.51
8378 11707 7.980662 TCGTTGCATGAATTTTGATTATTGGAT 59.019 29.630 0.00 0.00 0.00 3.41
8379 11708 7.275341 GTCGTTGCATGAATTTTGATTATTGGA 59.725 33.333 0.00 0.00 0.00 3.53
8380 11709 7.063191 TGTCGTTGCATGAATTTTGATTATTGG 59.937 33.333 0.00 0.00 0.00 3.16
8381 11710 7.894247 GTGTCGTTGCATGAATTTTGATTATTG 59.106 33.333 0.00 0.00 0.00 1.90
8382 11711 7.598118 TGTGTCGTTGCATGAATTTTGATTATT 59.402 29.630 0.00 0.00 0.00 1.40
8383 11712 7.089538 TGTGTCGTTGCATGAATTTTGATTAT 58.910 30.769 0.00 0.00 0.00 1.28
8384 11713 6.442112 TGTGTCGTTGCATGAATTTTGATTA 58.558 32.000 0.00 0.00 0.00 1.75
8385 11714 5.288015 TGTGTCGTTGCATGAATTTTGATT 58.712 33.333 0.00 0.00 0.00 2.57
8386 11715 4.869215 TGTGTCGTTGCATGAATTTTGAT 58.131 34.783 0.00 0.00 0.00 2.57
8387 11716 4.298744 TGTGTCGTTGCATGAATTTTGA 57.701 36.364 0.00 0.00 0.00 2.69
8388 11717 4.317980 GGTTGTGTCGTTGCATGAATTTTG 60.318 41.667 0.00 0.00 0.00 2.44
8389 11718 3.801594 GGTTGTGTCGTTGCATGAATTTT 59.198 39.130 0.00 0.00 0.00 1.82
8390 11719 3.068024 AGGTTGTGTCGTTGCATGAATTT 59.932 39.130 0.00 0.00 0.00 1.82
8391 11720 2.622942 AGGTTGTGTCGTTGCATGAATT 59.377 40.909 0.00 0.00 0.00 2.17
8392 11721 2.030893 CAGGTTGTGTCGTTGCATGAAT 60.031 45.455 0.00 0.00 0.00 2.57
8393 11722 1.333308 CAGGTTGTGTCGTTGCATGAA 59.667 47.619 0.00 0.00 0.00 2.57
8394 11723 0.943673 CAGGTTGTGTCGTTGCATGA 59.056 50.000 0.00 0.00 0.00 3.07
8395 11724 0.661187 GCAGGTTGTGTCGTTGCATG 60.661 55.000 0.00 0.00 0.00 4.06
8396 11725 1.100463 TGCAGGTTGTGTCGTTGCAT 61.100 50.000 0.00 0.00 0.00 3.96
8397 11726 1.713937 CTGCAGGTTGTGTCGTTGCA 61.714 55.000 5.57 0.00 0.00 4.08
8398 11727 1.009675 CTGCAGGTTGTGTCGTTGC 60.010 57.895 5.57 0.00 0.00 4.17
8399 11728 1.013596 TTCTGCAGGTTGTGTCGTTG 58.986 50.000 15.13 0.00 0.00 4.10
8400 11729 1.967319 ATTCTGCAGGTTGTGTCGTT 58.033 45.000 15.13 0.00 0.00 3.85
8401 11730 1.967319 AATTCTGCAGGTTGTGTCGT 58.033 45.000 15.13 0.00 0.00 4.34
8402 11731 3.249799 TGTAAATTCTGCAGGTTGTGTCG 59.750 43.478 15.13 0.00 0.00 4.35
8403 11732 4.829064 TGTAAATTCTGCAGGTTGTGTC 57.171 40.909 15.13 0.59 0.00 3.67
8404 11733 4.826733 TCATGTAAATTCTGCAGGTTGTGT 59.173 37.500 15.13 0.00 0.00 3.72
8405 11734 5.048504 AGTCATGTAAATTCTGCAGGTTGTG 60.049 40.000 15.13 7.39 0.00 3.33
8406 11735 5.048504 CAGTCATGTAAATTCTGCAGGTTGT 60.049 40.000 15.13 0.00 0.00 3.32
8407 11736 5.396484 CAGTCATGTAAATTCTGCAGGTTG 58.604 41.667 15.13 0.86 0.00 3.77
8408 11737 4.082571 GCAGTCATGTAAATTCTGCAGGTT 60.083 41.667 15.13 6.66 46.95 3.50
8409 11738 3.441572 GCAGTCATGTAAATTCTGCAGGT 59.558 43.478 15.13 0.00 46.95 4.00
8410 11739 4.025015 GCAGTCATGTAAATTCTGCAGG 57.975 45.455 15.13 0.00 46.95 4.85
8414 11743 7.878477 ACAAATTGCAGTCATGTAAATTCTG 57.122 32.000 0.00 0.00 34.53 3.02
8415 11744 8.575589 TGTACAAATTGCAGTCATGTAAATTCT 58.424 29.630 8.69 0.00 34.53 2.40
8416 11745 8.741101 TGTACAAATTGCAGTCATGTAAATTC 57.259 30.769 8.69 0.52 34.53 2.17
8417 11746 9.539825 TTTGTACAAATTGCAGTCATGTAAATT 57.460 25.926 17.01 0.00 34.53 1.82
8418 11747 9.539825 TTTTGTACAAATTGCAGTCATGTAAAT 57.460 25.926 21.17 0.00 34.53 1.40
8419 11748 8.932945 TTTTGTACAAATTGCAGTCATGTAAA 57.067 26.923 21.17 0.00 34.53 2.01
8420 11749 8.932945 TTTTTGTACAAATTGCAGTCATGTAA 57.067 26.923 21.17 5.63 35.38 2.41
8448 11777 9.886132 TGATGTTTAACCTACTTAATTCCTCTC 57.114 33.333 0.00 0.00 0.00 3.20
8449 11778 9.892130 CTGATGTTTAACCTACTTAATTCCTCT 57.108 33.333 0.00 0.00 0.00 3.69
8450 11779 8.613482 GCTGATGTTTAACCTACTTAATTCCTC 58.387 37.037 0.00 0.00 0.00 3.71
8451 11780 8.107095 TGCTGATGTTTAACCTACTTAATTCCT 58.893 33.333 0.00 0.00 0.00 3.36
8452 11781 8.276252 TGCTGATGTTTAACCTACTTAATTCC 57.724 34.615 0.00 0.00 0.00 3.01
8455 11784 8.686334 CCATTGCTGATGTTTAACCTACTTAAT 58.314 33.333 0.00 0.00 33.71 1.40
8456 11785 7.362574 GCCATTGCTGATGTTTAACCTACTTAA 60.363 37.037 0.00 0.00 33.71 1.85
8457 11786 6.094881 GCCATTGCTGATGTTTAACCTACTTA 59.905 38.462 0.00 0.00 33.71 2.24
8458 11787 5.105756 GCCATTGCTGATGTTTAACCTACTT 60.106 40.000 0.00 0.00 33.71 2.24
8459 11788 4.399303 GCCATTGCTGATGTTTAACCTACT 59.601 41.667 0.00 0.00 33.71 2.57
8460 11789 4.672409 GCCATTGCTGATGTTTAACCTAC 58.328 43.478 0.00 0.00 33.71 3.18
8461 11790 4.981806 GCCATTGCTGATGTTTAACCTA 57.018 40.909 0.00 0.00 33.71 3.08
8462 11791 3.874392 GCCATTGCTGATGTTTAACCT 57.126 42.857 0.00 0.00 33.71 3.50
8475 11804 5.177326 TCAAAATTCACCATAAGCCATTGC 58.823 37.500 0.00 0.00 37.95 3.56
8476 11805 7.852971 AATCAAAATTCACCATAAGCCATTG 57.147 32.000 0.00 0.00 0.00 2.82
8547 11876 9.413734 CCTCCAGGTAATTTTTAGATCTCAATT 57.586 33.333 0.00 5.66 0.00 2.32
8548 11877 8.781951 TCCTCCAGGTAATTTTTAGATCTCAAT 58.218 33.333 0.00 0.00 36.34 2.57
8549 11878 8.158025 TCCTCCAGGTAATTTTTAGATCTCAA 57.842 34.615 0.00 0.00 36.34 3.02
8550 11879 7.635971 GCTCCTCCAGGTAATTTTTAGATCTCA 60.636 40.741 0.00 0.00 36.34 3.27
8551 11880 6.708502 GCTCCTCCAGGTAATTTTTAGATCTC 59.291 42.308 0.00 0.00 36.34 2.75
8552 11881 6.388394 AGCTCCTCCAGGTAATTTTTAGATCT 59.612 38.462 0.00 0.00 36.34 2.75
8553 11882 6.596621 AGCTCCTCCAGGTAATTTTTAGATC 58.403 40.000 0.00 0.00 36.34 2.75
8554 11883 6.582929 AGCTCCTCCAGGTAATTTTTAGAT 57.417 37.500 0.00 0.00 36.34 1.98
8555 11884 6.388619 AAGCTCCTCCAGGTAATTTTTAGA 57.611 37.500 0.00 0.00 36.34 2.10
8556 11885 5.294552 CGAAGCTCCTCCAGGTAATTTTTAG 59.705 44.000 0.00 0.00 36.34 1.85
8557 11886 5.183228 CGAAGCTCCTCCAGGTAATTTTTA 58.817 41.667 0.00 0.00 36.34 1.52
8558 11887 4.010349 CGAAGCTCCTCCAGGTAATTTTT 58.990 43.478 0.00 0.00 36.34 1.94
8559 11888 3.610911 CGAAGCTCCTCCAGGTAATTTT 58.389 45.455 0.00 0.00 36.34 1.82
8560 11889 3.268023 CGAAGCTCCTCCAGGTAATTT 57.732 47.619 0.00 0.00 36.34 1.82
8561 11890 2.990066 CGAAGCTCCTCCAGGTAATT 57.010 50.000 0.00 0.00 36.34 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.