Multiple sequence alignment - TraesCS1D01G338100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G338100 chr1D 100.000 4947 0 0 2493 7439 427484660 427479714 0.000000e+00 9136.0
1 TraesCS1D01G338100 chr1D 100.000 1999 0 0 1 1999 427487152 427485154 0.000000e+00 3692.0
2 TraesCS1D01G338100 chr1D 100.000 1906 0 0 7955 9860 427479198 427477293 0.000000e+00 3520.0
3 TraesCS1D01G338100 chr1D 87.355 1550 174 20 5901 7437 451871485 451869945 0.000000e+00 1757.0
4 TraesCS1D01G338100 chr1D 93.883 752 40 5 4908 5656 475191718 475192466 0.000000e+00 1129.0
5 TraesCS1D01G338100 chr1D 96.451 479 12 3 7955 8429 475193023 475193500 0.000000e+00 785.0
6 TraesCS1D01G338100 chr1D 94.763 401 21 0 9460 9860 448369190 448369590 8.410000e-175 625.0
7 TraesCS1D01G338100 chr1D 94.514 401 21 1 9460 9860 65759476 65759077 1.410000e-172 617.0
8 TraesCS1D01G338100 chr1D 94.264 401 23 0 9460 9860 233574444 233574844 1.820000e-171 614.0
9 TraesCS1D01G338100 chr1D 94.264 401 23 0 9460 9860 388057571 388057971 1.820000e-171 614.0
10 TraesCS1D01G338100 chr1D 84.320 625 78 17 4817 5435 217289039 217289649 2.370000e-165 593.0
11 TraesCS1D01G338100 chr1D 86.957 322 38 2 8600 8921 427197523 427197206 9.420000e-95 359.0
12 TraesCS1D01G338100 chr1D 77.905 525 100 12 1275 1794 427158619 427158106 7.440000e-81 313.0
13 TraesCS1D01G338100 chr2D 89.996 2649 192 36 4816 7437 41266152 41263550 0.000000e+00 3356.0
14 TraesCS1D01G338100 chr2D 89.517 2547 170 40 4918 7439 41822371 41819897 0.000000e+00 3134.0
15 TraesCS1D01G338100 chr2D 94.080 473 24 4 7955 8425 41819881 41819411 0.000000e+00 715.0
16 TraesCS1D01G338100 chr2D 93.869 473 25 4 7955 8425 41263532 41263062 0.000000e+00 710.0
17 TraesCS1D01G338100 chr2D 87.927 439 48 5 4816 5250 41266647 41266210 6.830000e-141 512.0
18 TraesCS1D01G338100 chr2D 86.188 362 33 5 4906 5251 41267050 41266690 9.350000e-100 375.0
19 TraesCS1D01G338100 chr2D 88.930 271 25 4 2514 2782 114817924 114818191 7.380000e-86 329.0
20 TraesCS1D01G338100 chr2D 79.026 267 35 18 3517 3772 483759706 483759450 7.920000e-36 163.0
21 TraesCS1D01G338100 chr2D 76.444 225 40 11 3817 4038 471057893 471057679 1.050000e-19 110.0
22 TraesCS1D01G338100 chr7A 89.818 2642 214 40 4821 7435 733140150 733137537 0.000000e+00 3338.0
23 TraesCS1D01G338100 chr7A 89.889 2611 205 44 4816 7413 128399282 128401846 0.000000e+00 3304.0
24 TraesCS1D01G338100 chr7A 88.987 2043 170 38 4817 6831 78337623 78335608 0.000000e+00 2475.0
25 TraesCS1D01G338100 chr7A 73.655 539 102 26 3253 3778 487483627 487483116 1.320000e-38 172.0
26 TraesCS1D01G338100 chr7A 77.491 271 42 19 3517 3774 139607462 139607198 2.870000e-30 145.0
27 TraesCS1D01G338100 chr7A 79.032 186 28 10 4815 4991 205282009 205282192 6.260000e-22 117.0
28 TraesCS1D01G338100 chr7A 78.571 182 34 5 3817 3996 556296193 556296015 2.250000e-21 115.0
29 TraesCS1D01G338100 chr5A 89.478 2661 212 38 4816 7439 413798709 413801338 0.000000e+00 3301.0
30 TraesCS1D01G338100 chr5A 90.275 473 43 3 7955 8425 540689048 540689519 5.060000e-172 616.0
31 TraesCS1D01G338100 chr5A 87.868 272 29 3 2514 2783 10901175 10901444 5.750000e-82 316.0
32 TraesCS1D01G338100 chr5A 82.969 229 30 7 3144 3371 480333910 480333690 2.170000e-46 198.0
33 TraesCS1D01G338100 chr5A 77.119 236 41 12 3144 3372 477560345 477560116 3.740000e-24 124.0
34 TraesCS1D01G338100 chr5A 71.570 707 126 55 4081 4746 29166460 29165788 1.340000e-23 122.0
35 TraesCS1D01G338100 chr5A 75.458 273 50 13 3128 3396 480299178 480298919 6.260000e-22 117.0
36 TraesCS1D01G338100 chr6D 89.294 2662 212 50 4814 7439 11419907 11417283 0.000000e+00 3269.0
37 TraesCS1D01G338100 chr6D 93.568 482 26 5 7955 8435 11417267 11416790 0.000000e+00 713.0
38 TraesCS1D01G338100 chr6D 76.426 263 40 17 3816 4066 5974098 5973846 1.340000e-23 122.0
39 TraesCS1D01G338100 chr7D 87.883 2674 221 57 4815 7439 125970349 125967730 0.000000e+00 3048.0
40 TraesCS1D01G338100 chr7D 88.659 1790 147 32 4843 6601 29470547 29468783 0.000000e+00 2130.0
41 TraesCS1D01G338100 chr7D 87.259 1554 175 18 5897 7439 227753250 227751709 0.000000e+00 1751.0
42 TraesCS1D01G338100 chr7D 85.270 1609 189 32 5709 7304 605883096 605881523 0.000000e+00 1615.0
43 TraesCS1D01G338100 chr7D 94.080 473 23 4 7955 8426 125967714 125967246 0.000000e+00 713.0
44 TraesCS1D01G338100 chr7D 93.711 477 27 3 7955 8429 29467968 29467493 0.000000e+00 712.0
45 TraesCS1D01G338100 chr7D 87.868 272 27 3 2514 2783 411893437 411893170 2.070000e-81 315.0
46 TraesCS1D01G338100 chr7D 77.778 306 52 9 9067 9358 294041151 294041454 3.660000e-39 174.0
47 TraesCS1D01G338100 chr7D 77.559 254 38 16 3530 3778 463710271 463710032 1.730000e-27 135.0
48 TraesCS1D01G338100 chr3A 87.929 2361 195 45 4905 7229 14346688 14348994 0.000000e+00 2699.0
49 TraesCS1D01G338100 chr3A 92.797 472 31 3 7955 8425 14365417 14365886 0.000000e+00 680.0
50 TraesCS1D01G338100 chr3A 91.579 95 8 0 9360 9454 478982111 478982205 2.230000e-26 132.0
51 TraesCS1D01G338100 chr1B 94.163 1285 63 6 646 1925 579572164 579570887 0.000000e+00 1947.0
52 TraesCS1D01G338100 chr1B 94.086 1285 64 6 646 1925 579475207 579473930 0.000000e+00 1941.0
53 TraesCS1D01G338100 chr1B 89.102 1358 81 41 3498 4821 579462095 579460771 0.000000e+00 1626.0
54 TraesCS1D01G338100 chr1B 88.873 1357 88 40 3498 4821 579558916 579557590 0.000000e+00 1611.0
55 TraesCS1D01G338100 chr1B 93.840 1039 55 6 8425 9458 579557594 579556560 0.000000e+00 1555.0
56 TraesCS1D01G338100 chr1B 93.648 1039 57 7 8425 9458 579460775 579459741 0.000000e+00 1544.0
57 TraesCS1D01G338100 chr1B 92.697 890 60 4 939 1823 577676016 577675127 0.000000e+00 1279.0
58 TraesCS1D01G338100 chr1B 90.824 643 40 11 1 637 579608087 579607458 0.000000e+00 843.0
59 TraesCS1D01G338100 chr1B 91.979 561 34 9 2926 3477 579462723 579462165 0.000000e+00 776.0
60 TraesCS1D01G338100 chr1B 91.950 559 36 9 2926 3477 579559542 579558986 0.000000e+00 774.0
61 TraesCS1D01G338100 chr1B 85.455 605 76 10 8459 9053 577675130 577674528 3.910000e-173 619.0
62 TraesCS1D01G338100 chr1B 88.603 272 28 2 2514 2784 8014971 8014702 2.660000e-85 327.0
63 TraesCS1D01G338100 chr1B 77.800 509 97 12 1291 1794 577654111 577653614 5.790000e-77 300.0
64 TraesCS1D01G338100 chr1B 90.604 149 10 3 2788 2934 579463121 579462975 2.810000e-45 195.0
65 TraesCS1D01G338100 chr1B 90.604 149 10 3 2788 2934 579559940 579559794 2.810000e-45 195.0
66 TraesCS1D01G338100 chr3D 84.130 2029 249 37 5425 7439 44974800 44972831 0.000000e+00 1895.0
67 TraesCS1D01G338100 chr3D 95.012 401 20 0 9460 9860 564044562 564044962 1.810000e-176 630.0
68 TraesCS1D01G338100 chr3D 94.763 401 21 0 9460 9860 517141383 517140983 8.410000e-175 625.0
69 TraesCS1D01G338100 chr3D 94.514 401 22 0 9460 9860 564014451 564014851 3.910000e-173 619.0
70 TraesCS1D01G338100 chr3D 88.795 473 46 5 7955 8425 72025662 72026129 3.090000e-159 573.0
71 TraesCS1D01G338100 chr3D 88.603 272 27 4 2514 2783 27679182 27678913 2.660000e-85 327.0
72 TraesCS1D01G338100 chr3D 88.235 272 27 4 2514 2783 2993928 2993660 4.440000e-83 320.0
73 TraesCS1D01G338100 chr3D 76.596 282 44 16 3176 3452 97155223 97154959 1.730000e-27 135.0
74 TraesCS1D01G338100 chr5D 87.781 1555 168 19 5897 7439 62143911 62145455 0.000000e+00 1799.0
75 TraesCS1D01G338100 chr5D 87.249 1545 175 18 5902 7437 335872653 335871122 0.000000e+00 1742.0
76 TraesCS1D01G338100 chr5D 94.486 399 22 0 9462 9860 509290578 509290976 5.060000e-172 616.0
77 TraesCS1D01G338100 chr5D 76.381 724 95 50 4070 4746 393910829 393910135 4.440000e-83 320.0
78 TraesCS1D01G338100 chr5D 75.857 671 103 38 4104 4734 531969872 531970523 4.510000e-73 287.0
79 TraesCS1D01G338100 chr5D 82.041 245 33 7 3144 3381 379811784 379811544 2.170000e-46 198.0
80 TraesCS1D01G338100 chr5D 93.814 97 6 0 9360 9456 417441327 417441423 7.980000e-31 147.0
81 TraesCS1D01G338100 chr5D 92.632 95 7 0 9360 9454 358609687 358609781 4.800000e-28 137.0
82 TraesCS1D01G338100 chr5D 79.474 190 28 10 3815 4001 450213843 450214024 3.740000e-24 124.0
83 TraesCS1D01G338100 chr1A 84.446 1813 221 47 5423 7214 354545635 354547407 0.000000e+00 1729.0
84 TraesCS1D01G338100 chr1A 89.215 1363 86 34 3499 4821 522557119 522555778 0.000000e+00 1646.0
85 TraesCS1D01G338100 chr1A 98.041 868 17 0 1010 1877 522560868 522560001 0.000000e+00 1509.0
86 TraesCS1D01G338100 chr1A 92.382 1037 63 9 8425 9457 522555782 522554758 0.000000e+00 1463.0
87 TraesCS1D01G338100 chr1A 90.434 899 79 5 932 1823 522472901 522472003 0.000000e+00 1177.0
88 TraesCS1D01G338100 chr1A 94.110 730 27 8 1 721 522563435 522562713 0.000000e+00 1096.0
89 TraesCS1D01G338100 chr1A 87.594 532 43 10 2948 3477 522557701 522557191 6.590000e-166 595.0
90 TraesCS1D01G338100 chr1A 85.177 479 63 6 8580 9053 522463890 522463415 1.490000e-132 484.0
91 TraesCS1D01G338100 chr1A 93.605 172 6 4 2789 2956 522558480 522558310 1.640000e-62 252.0
92 TraesCS1D01G338100 chr1A 91.304 92 4 3 1908 1999 522558654 522558567 1.340000e-23 122.0
93 TraesCS1D01G338100 chr1A 74.441 313 44 26 4066 4354 323411169 323411469 1.750000e-17 102.0
94 TraesCS1D01G338100 chr1A 73.353 334 56 27 4066 4374 520119828 520120153 1.050000e-14 93.5
95 TraesCS1D01G338100 chr4D 94.527 402 21 1 9460 9860 390900850 390901251 3.910000e-173 619.0
96 TraesCS1D01G338100 chr4D 76.699 721 107 42 4066 4748 38590045 38590742 2.640000e-90 344.0
97 TraesCS1D01G338100 chr4D 92.079 101 7 1 9357 9457 133000275 133000374 3.710000e-29 141.0
98 TraesCS1D01G338100 chr4D 82.734 139 15 8 4408 4540 446174390 446174525 2.250000e-21 115.0
99 TraesCS1D01G338100 chr7B 90.074 272 23 3 2514 2783 720307936 720307667 5.670000e-92 350.0
100 TraesCS1D01G338100 chr7B 87.912 273 27 5 2515 2784 72756667 72756398 5.750000e-82 316.0
101 TraesCS1D01G338100 chr3B 89.338 272 25 3 2514 2783 47194146 47194415 1.230000e-88 339.0
102 TraesCS1D01G338100 chr3B 77.961 363 57 21 4111 4465 743601635 743601288 1.300000e-48 206.0
103 TraesCS1D01G338100 chr3B 77.961 363 57 21 4111 4465 743679056 743678709 1.300000e-48 206.0
104 TraesCS1D01G338100 chr3B 75.810 401 69 21 3392 3776 826923368 826923756 2.830000e-40 178.0
105 TraesCS1D01G338100 chr3B 78.750 240 42 8 3238 3471 707124989 707124753 1.720000e-32 152.0
106 TraesCS1D01G338100 chr3B 79.255 188 29 8 3823 4003 707124167 707123983 1.340000e-23 122.0
107 TraesCS1D01G338100 chr3B 77.358 212 34 10 3815 4025 616949059 616949257 8.090000e-21 113.0
108 TraesCS1D01G338100 chr3B 100.000 30 0 0 4066 4095 728974952 728974981 1.000000e-03 56.5
109 TraesCS1D01G338100 chr5B 77.843 510 69 31 4816 5293 522542195 522541698 9.760000e-70 276.0
110 TraesCS1D01G338100 chr6B 78.049 451 79 16 98 541 635079365 635078928 5.870000e-67 267.0
111 TraesCS1D01G338100 chr6B 76.923 442 76 22 4110 4538 693038081 693037653 2.770000e-55 228.0
112 TraesCS1D01G338100 chr6B 90.909 99 9 0 9359 9457 414238285 414238187 6.210000e-27 134.0
113 TraesCS1D01G338100 chr6B 89.362 47 5 0 3774 3820 415876458 415876504 1.070000e-04 60.2
114 TraesCS1D01G338100 chrUn 78.237 363 56 21 4111 4465 432938475 432938128 2.790000e-50 211.0
115 TraesCS1D01G338100 chr4B 82.955 176 25 5 3528 3699 538949815 538949641 4.770000e-33 154.0
116 TraesCS1D01G338100 chr4B 81.325 166 26 3 3126 3289 637382142 637381980 8.040000e-26 130.0
117 TraesCS1D01G338100 chr4B 78.241 216 32 13 3496 3707 499057365 499057569 3.740000e-24 124.0
118 TraesCS1D01G338100 chr2B 79.167 240 37 11 3153 3382 692624151 692624387 4.770000e-33 154.0
119 TraesCS1D01G338100 chr2B 82.906 117 14 5 3663 3775 246374877 246374991 6.300000e-17 100.0
120 TraesCS1D01G338100 chr2B 79.245 106 17 4 4645 4745 489017827 489017932 1.780000e-07 69.4
121 TraesCS1D01G338100 chr2B 90.698 43 4 0 3776 3818 523529831 523529873 3.850000e-04 58.4
122 TraesCS1D01G338100 chr2A 79.476 229 31 10 3819 4039 729855678 729855898 2.220000e-31 148.0
123 TraesCS1D01G338100 chr6A 92.784 97 7 0 9361 9457 378031645 378031549 3.710000e-29 141.0
124 TraesCS1D01G338100 chr4A 75.655 267 46 16 3517 3773 743543080 743543337 2.250000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G338100 chr1D 427477293 427487152 9859 True 5449.333333 9136 100.000000 1 9860 3 chr1D.!!$R5 9859
1 TraesCS1D01G338100 chr1D 451869945 451871485 1540 True 1757.000000 1757 87.355000 5901 7437 1 chr1D.!!$R4 1536
2 TraesCS1D01G338100 chr1D 475191718 475193500 1782 False 957.000000 1129 95.167000 4908 8429 2 chr1D.!!$F5 3521
3 TraesCS1D01G338100 chr1D 217289039 217289649 610 False 593.000000 593 84.320000 4817 5435 1 chr1D.!!$F1 618
4 TraesCS1D01G338100 chr1D 427158106 427158619 513 True 313.000000 313 77.905000 1275 1794 1 chr1D.!!$R2 519
5 TraesCS1D01G338100 chr2D 41819411 41822371 2960 True 1924.500000 3134 91.798500 4918 8425 2 chr2D.!!$R4 3507
6 TraesCS1D01G338100 chr2D 41263062 41267050 3988 True 1238.250000 3356 89.495000 4816 8425 4 chr2D.!!$R3 3609
7 TraesCS1D01G338100 chr7A 733137537 733140150 2613 True 3338.000000 3338 89.818000 4821 7435 1 chr7A.!!$R5 2614
8 TraesCS1D01G338100 chr7A 128399282 128401846 2564 False 3304.000000 3304 89.889000 4816 7413 1 chr7A.!!$F1 2597
9 TraesCS1D01G338100 chr7A 78335608 78337623 2015 True 2475.000000 2475 88.987000 4817 6831 1 chr7A.!!$R1 2014
10 TraesCS1D01G338100 chr5A 413798709 413801338 2629 False 3301.000000 3301 89.478000 4816 7439 1 chr5A.!!$F2 2623
11 TraesCS1D01G338100 chr6D 11416790 11419907 3117 True 1991.000000 3269 91.431000 4814 8435 2 chr6D.!!$R2 3621
12 TraesCS1D01G338100 chr7D 125967246 125970349 3103 True 1880.500000 3048 90.981500 4815 8426 2 chr7D.!!$R6 3611
13 TraesCS1D01G338100 chr7D 227751709 227753250 1541 True 1751.000000 1751 87.259000 5897 7439 1 chr7D.!!$R1 1542
14 TraesCS1D01G338100 chr7D 605881523 605883096 1573 True 1615.000000 1615 85.270000 5709 7304 1 chr7D.!!$R4 1595
15 TraesCS1D01G338100 chr7D 29467493 29470547 3054 True 1421.000000 2130 91.185000 4843 8429 2 chr7D.!!$R5 3586
16 TraesCS1D01G338100 chr3A 14346688 14348994 2306 False 2699.000000 2699 87.929000 4905 7229 1 chr3A.!!$F1 2324
17 TraesCS1D01G338100 chr1B 579570887 579572164 1277 True 1947.000000 1947 94.163000 646 1925 1 chr1B.!!$R4 1279
18 TraesCS1D01G338100 chr1B 579473930 579475207 1277 True 1941.000000 1941 94.086000 646 1925 1 chr1B.!!$R3 1279
19 TraesCS1D01G338100 chr1B 579459741 579463121 3380 True 1035.250000 1626 91.333250 2788 9458 4 chr1B.!!$R7 6670
20 TraesCS1D01G338100 chr1B 579556560 579559940 3380 True 1033.750000 1611 91.316750 2788 9458 4 chr1B.!!$R8 6670
21 TraesCS1D01G338100 chr1B 577674528 577676016 1488 True 949.000000 1279 89.076000 939 9053 2 chr1B.!!$R6 8114
22 TraesCS1D01G338100 chr1B 579607458 579608087 629 True 843.000000 843 90.824000 1 637 1 chr1B.!!$R5 636
23 TraesCS1D01G338100 chr3D 44972831 44974800 1969 True 1895.000000 1895 84.130000 5425 7439 1 chr3D.!!$R3 2014
24 TraesCS1D01G338100 chr5D 62143911 62145455 1544 False 1799.000000 1799 87.781000 5897 7439 1 chr5D.!!$F1 1542
25 TraesCS1D01G338100 chr5D 335871122 335872653 1531 True 1742.000000 1742 87.249000 5902 7437 1 chr5D.!!$R1 1535
26 TraesCS1D01G338100 chr5D 393910135 393910829 694 True 320.000000 320 76.381000 4070 4746 1 chr5D.!!$R3 676
27 TraesCS1D01G338100 chr5D 531969872 531970523 651 False 287.000000 287 75.857000 4104 4734 1 chr5D.!!$F6 630
28 TraesCS1D01G338100 chr1A 354545635 354547407 1772 False 1729.000000 1729 84.446000 5423 7214 1 chr1A.!!$F2 1791
29 TraesCS1D01G338100 chr1A 522472003 522472901 898 True 1177.000000 1177 90.434000 932 1823 1 chr1A.!!$R2 891
30 TraesCS1D01G338100 chr1A 522554758 522563435 8677 True 954.714286 1646 92.321571 1 9457 7 chr1A.!!$R3 9456
31 TraesCS1D01G338100 chr4D 38590045 38590742 697 False 344.000000 344 76.699000 4066 4748 1 chr4D.!!$F1 682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
861 2649 0.031585 TACTGAACGCGTGAGTTGCT 59.968 50.000 24.35 3.19 34.00 3.91 F
1957 5072 0.179045 ACACACGGAAAGCAGCTCTT 60.179 50.000 0.00 0.00 36.34 2.85 F
2778 5893 0.031994 ATGTTTTCTTGCGTGGGTGC 59.968 50.000 0.00 0.00 0.00 5.01 F
2780 5895 0.869880 GTTTTCTTGCGTGGGTGCAC 60.870 55.000 8.80 8.80 46.25 4.57 F
3014 7011 0.893727 AAACCACGGCTAGGGCTTTG 60.894 55.000 0.00 0.00 38.73 2.77 F
4881 9079 1.135972 CCGTTCACTGCCGAAAGATTG 60.136 52.381 0.00 0.00 0.00 2.67 F
5587 10364 0.036732 ATTTGCCTCCTCACGAAGCA 59.963 50.000 0.00 0.00 36.10 3.91 F
5648 10425 1.037493 TATTCGCACAGGACGCCTAT 58.963 50.000 0.00 0.00 29.64 2.57 F
5673 10451 1.438814 CCGGCCCGTTACGTTATCT 59.561 57.895 0.85 0.00 0.00 1.98 F
6422 11280 1.981256 ACAAAGGTCATTTCGGTGCT 58.019 45.000 0.00 0.00 0.00 4.40 F
8190 13075 0.104304 GCCGATGACACCTAACCGAT 59.896 55.000 0.00 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2759 5874 0.031994 GCACCCACGCAAGAAAACAT 59.968 50.000 0.00 0.00 43.62 2.71 R
2847 5964 0.106708 CCATACTGGTGCGTATGCCT 59.893 55.000 4.05 0.00 43.31 4.75 R
4572 8730 3.509575 TGTGGTTATTCTTGGGATGTTGC 59.490 43.478 0.00 0.00 0.00 4.17 R
4881 9079 5.032327 AGTACCATCCCGGATAGAAAAAC 57.968 43.478 0.73 0.00 38.63 2.43 R
4991 9199 0.541764 TGGGCAGGAAAACATGGGTC 60.542 55.000 0.00 0.00 0.00 4.46 R
6328 11185 3.655276 TGACCTTAAAGACTCGACCAC 57.345 47.619 0.00 0.00 0.00 4.16 R
7129 12006 1.096416 CCACTCTCTCCTACGGTGAC 58.904 60.000 0.00 0.00 0.00 3.67 R
8028 12912 6.959639 ATACATTGTTTCTGACCACTTGTT 57.040 33.333 0.00 0.00 0.00 2.83 R
8190 13075 2.106938 CATTAGAGCTCGGCCGCA 59.893 61.111 23.51 8.85 0.00 5.69 R
8578 13467 0.969149 TTGATGCAGTCCTCGTCACT 59.031 50.000 0.00 0.00 0.00 3.41 R
9817 14713 0.105039 CTCCATAGTTCCACCGCCTC 59.895 60.000 0.00 0.00 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 4.708421 AGCATGGCAATTCTACAGAAATGT 59.292 37.500 8.43 0.00 37.29 2.71
141 148 6.757897 TCCATGGCAAATTTAGTAGACTTG 57.242 37.500 6.96 0.00 0.00 3.16
212 219 8.635765 ACAATGGCAAATATATTGTAGGTAGG 57.364 34.615 0.00 0.00 41.69 3.18
235 242 8.110860 AGGATGGCAATTTATTATTTAGACCG 57.889 34.615 0.00 0.00 0.00 4.79
314 329 7.329499 TGTTTCCCAATGAATTTGATATGTGG 58.671 34.615 0.00 0.00 37.53 4.17
379 394 4.877773 ACAACTCCCCCATAATTGCAATA 58.122 39.130 13.39 1.72 0.00 1.90
471 486 7.364200 ACTTATACGTGCATTTGTTTTGCTAA 58.636 30.769 0.00 0.00 40.77 3.09
547 562 9.469807 CTAACAACATGGCTTGTTTGTTAAATA 57.530 29.630 24.02 14.52 46.51 1.40
549 564 9.988815 AACAACATGGCTTGTTTGTTAAATATA 57.011 25.926 21.06 0.00 46.51 0.86
578 593 8.511604 TTTTTGTCTTTTTCATGGCCAATTTA 57.488 26.923 10.96 0.00 0.00 1.40
594 609 6.311200 GGCCAATTTACAACATAAAGCTTGAG 59.689 38.462 0.00 0.00 0.00 3.02
722 2510 3.869832 GGTAGAGGGCGAAACAATAAGAC 59.130 47.826 0.00 0.00 0.00 3.01
786 2574 2.575735 TGTCAGCCAGATATTTGGGTCA 59.424 45.455 13.75 7.73 45.42 4.02
831 2619 1.351350 AGGTAAACAGGAGGCTTCCAC 59.649 52.381 18.32 5.68 46.64 4.02
838 2626 1.194781 AGGAGGCTTCCACGATGTGT 61.195 55.000 18.32 0.00 46.64 3.72
861 2649 0.031585 TACTGAACGCGTGAGTTGCT 59.968 50.000 24.35 3.19 34.00 3.91
867 2655 3.782244 GCGTGAGTTGCTGAGGCG 61.782 66.667 0.00 0.00 42.25 5.52
868 2656 2.049156 CGTGAGTTGCTGAGGCGA 60.049 61.111 0.00 0.00 42.25 5.54
931 2719 9.901172 AATTCTGAAACCCGTCTATAAATACTT 57.099 29.630 0.00 0.00 0.00 2.24
964 2752 2.045561 TCTCTTCTCTGCCTAGTCCG 57.954 55.000 0.00 0.00 0.00 4.79
968 2756 2.443016 CTCTGCCTAGTCCGCCCT 60.443 66.667 0.00 0.00 0.00 5.19
1128 2926 3.197790 CTGGACCTCGGCATTGCG 61.198 66.667 1.91 0.00 0.00 4.85
1237 3035 3.503363 GCCTCATGCGTGTGCTCC 61.503 66.667 5.68 0.00 43.34 4.70
1882 3881 2.338015 CCTTCATGCTGTTGCCGCT 61.338 57.895 0.00 0.00 38.71 5.52
1945 5060 1.439353 GGGAGCATGCATACACACGG 61.439 60.000 21.98 0.00 0.00 4.94
1954 5069 1.442769 CATACACACGGAAAGCAGCT 58.557 50.000 0.00 0.00 0.00 4.24
1955 5070 1.394917 CATACACACGGAAAGCAGCTC 59.605 52.381 0.00 0.00 0.00 4.09
1956 5071 0.679505 TACACACGGAAAGCAGCTCT 59.320 50.000 0.00 0.00 0.00 4.09
1957 5072 0.179045 ACACACGGAAAGCAGCTCTT 60.179 50.000 0.00 0.00 36.34 2.85
2519 5634 0.758310 TGGAGGCCAAATGCAACACA 60.758 50.000 5.01 0.00 43.89 3.72
2521 5636 1.673626 GGAGGCCAAATGCAACACATG 60.674 52.381 5.01 0.00 43.89 3.21
2522 5637 1.001181 GAGGCCAAATGCAACACATGT 59.999 47.619 5.01 0.00 43.89 3.21
2523 5638 1.417145 AGGCCAAATGCAACACATGTT 59.583 42.857 5.01 0.00 43.89 2.71
2524 5639 2.632028 AGGCCAAATGCAACACATGTTA 59.368 40.909 5.01 0.00 43.89 2.41
2525 5640 3.261390 AGGCCAAATGCAACACATGTTAT 59.739 39.130 5.01 0.00 43.89 1.89
2526 5641 3.371591 GGCCAAATGCAACACATGTTATG 59.628 43.478 0.00 0.00 43.89 1.90
2527 5642 3.371591 GCCAAATGCAACACATGTTATGG 59.628 43.478 0.00 3.37 39.60 2.74
2528 5643 4.818642 CCAAATGCAACACATGTTATGGA 58.181 39.130 0.00 0.00 39.60 3.41
2533 5648 3.573538 TGCAACACATGTTATGGAAGCTT 59.426 39.130 0.00 0.00 36.32 3.74
2534 5649 3.922240 GCAACACATGTTATGGAAGCTTG 59.078 43.478 2.10 0.00 36.32 4.01
2535 5650 3.855689 ACACATGTTATGGAAGCTTGC 57.144 42.857 11.58 11.58 33.60 4.01
2537 5652 3.573538 ACACATGTTATGGAAGCTTGCAA 59.426 39.130 25.06 8.71 30.51 4.08
2539 5654 4.624024 CACATGTTATGGAAGCTTGCAAAG 59.376 41.667 25.06 12.66 40.18 2.77
2540 5655 4.281688 ACATGTTATGGAAGCTTGCAAAGT 59.718 37.500 25.06 11.19 39.64 2.66
2547 5662 2.314323 AAGCTTGCAAAGTTTGGTGG 57.686 45.000 17.11 0.00 45.94 4.61
2548 5663 1.554617 AAGCTTGCAAAGTTTGGTGGT 59.445 42.857 17.11 0.00 45.94 4.16
2549 5664 2.418609 AAGCTTGCAAAGTTTGGTGGTC 60.419 45.455 17.11 0.82 45.94 4.02
2550 5665 2.957491 CTTGCAAAGTTTGGTGGTCA 57.043 45.000 17.11 3.47 39.70 4.02
2551 5666 3.244033 CTTGCAAAGTTTGGTGGTCAA 57.756 42.857 17.11 10.67 39.70 3.18
2552 5667 3.594134 CTTGCAAAGTTTGGTGGTCAAA 58.406 40.909 17.11 0.00 39.70 2.69
2553 5668 3.902881 TGCAAAGTTTGGTGGTCAAAT 57.097 38.095 17.11 0.00 45.79 2.32
2555 5670 5.344743 TGCAAAGTTTGGTGGTCAAATAA 57.655 34.783 17.11 0.00 45.79 1.40
2556 5671 5.112686 TGCAAAGTTTGGTGGTCAAATAAC 58.887 37.500 17.11 0.00 45.79 1.89
2558 5673 5.757808 GCAAAGTTTGGTGGTCAAATAACAT 59.242 36.000 17.11 0.00 45.79 2.71
2560 5675 7.201688 GCAAAGTTTGGTGGTCAAATAACATTT 60.202 33.333 17.11 0.00 45.79 2.32
2561 5676 7.784633 AAGTTTGGTGGTCAAATAACATTTG 57.215 32.000 5.46 5.46 45.79 2.32
2562 5677 7.118496 AGTTTGGTGGTCAAATAACATTTGA 57.882 32.000 9.65 9.65 45.79 2.69
2563 5678 7.209475 AGTTTGGTGGTCAAATAACATTTGAG 58.791 34.615 13.20 0.00 45.79 3.02
2564 5679 5.720371 TGGTGGTCAAATAACATTTGAGG 57.280 39.130 13.20 0.00 38.88 3.86
2565 5680 5.389520 TGGTGGTCAAATAACATTTGAGGA 58.610 37.500 13.20 2.58 38.88 3.71
2567 5682 5.402398 GTGGTCAAATAACATTTGAGGAGC 58.598 41.667 13.20 4.86 38.88 4.70
2570 5685 6.267471 TGGTCAAATAACATTTGAGGAGCTTT 59.733 34.615 13.20 0.00 38.88 3.51
2571 5686 6.587608 GGTCAAATAACATTTGAGGAGCTTTG 59.412 38.462 13.20 0.00 38.88 2.77
2577 5692 6.463995 AACATTTGAGGAGCTTTGTACAAA 57.536 33.333 19.53 19.53 0.00 2.83
2578 5693 6.463995 ACATTTGAGGAGCTTTGTACAAAA 57.536 33.333 20.89 4.44 32.51 2.44
2611 5726 8.947055 AAAAATACAAAATCTGCTCAAACAGT 57.053 26.923 0.00 0.00 38.84 3.55
2612 5727 7.935338 AAATACAAAATCTGCTCAAACAGTG 57.065 32.000 0.00 0.00 38.84 3.66
2613 5728 3.709987 ACAAAATCTGCTCAAACAGTGC 58.290 40.909 0.00 0.00 38.84 4.40
2614 5729 3.130869 ACAAAATCTGCTCAAACAGTGCA 59.869 39.130 0.00 0.00 43.83 4.57
2615 5730 3.360249 AAATCTGCTCAAACAGTGCAC 57.640 42.857 9.40 9.40 41.43 4.57
2616 5731 2.267174 ATCTGCTCAAACAGTGCACT 57.733 45.000 15.25 15.25 41.43 4.40
2617 5732 1.586422 TCTGCTCAAACAGTGCACTC 58.414 50.000 18.64 4.26 41.43 3.51
2618 5733 1.134431 TCTGCTCAAACAGTGCACTCA 60.134 47.619 18.64 9.22 41.43 3.41
2619 5734 1.003116 CTGCTCAAACAGTGCACTCAC 60.003 52.381 18.64 1.94 41.43 3.51
2620 5735 1.016627 GCTCAAACAGTGCACTCACA 58.983 50.000 18.64 0.00 45.49 3.58
2621 5736 1.605710 GCTCAAACAGTGCACTCACAT 59.394 47.619 18.64 0.23 45.49 3.21
2622 5737 2.033801 GCTCAAACAGTGCACTCACATT 59.966 45.455 18.64 6.37 45.49 2.71
2623 5738 3.489738 GCTCAAACAGTGCACTCACATTT 60.490 43.478 18.64 12.22 45.49 2.32
2624 5739 4.675510 CTCAAACAGTGCACTCACATTTT 58.324 39.130 18.64 8.56 45.49 1.82
2625 5740 4.422840 TCAAACAGTGCACTCACATTTTG 58.577 39.130 18.64 18.93 45.49 2.44
2626 5741 4.157472 TCAAACAGTGCACTCACATTTTGA 59.843 37.500 18.64 20.64 44.70 2.69
2627 5742 4.924305 AACAGTGCACTCACATTTTGAT 57.076 36.364 18.64 0.00 45.49 2.57
2628 5743 6.039159 TCAAACAGTGCACTCACATTTTGATA 59.961 34.615 18.64 4.48 43.53 2.15
2629 5744 6.389830 AACAGTGCACTCACATTTTGATAA 57.610 33.333 18.64 0.00 45.49 1.75
2630 5745 6.579666 ACAGTGCACTCACATTTTGATAAT 57.420 33.333 18.64 0.00 45.49 1.28
2631 5746 6.985117 ACAGTGCACTCACATTTTGATAATT 58.015 32.000 18.64 0.00 45.49 1.40
2632 5747 7.436118 ACAGTGCACTCACATTTTGATAATTT 58.564 30.769 18.64 0.00 45.49 1.82
2633 5748 7.927629 ACAGTGCACTCACATTTTGATAATTTT 59.072 29.630 18.64 0.00 45.49 1.82
2634 5749 8.430063 CAGTGCACTCACATTTTGATAATTTTC 58.570 33.333 18.64 0.00 45.49 2.29
2635 5750 8.143193 AGTGCACTCACATTTTGATAATTTTCA 58.857 29.630 15.25 0.00 45.49 2.69
2636 5751 8.430063 GTGCACTCACATTTTGATAATTTTCAG 58.570 33.333 10.32 0.00 42.66 3.02
2637 5752 8.143193 TGCACTCACATTTTGATAATTTTCAGT 58.857 29.630 0.00 0.00 32.17 3.41
2638 5753 8.430063 GCACTCACATTTTGATAATTTTCAGTG 58.570 33.333 8.67 8.67 32.17 3.66
2639 5754 9.681692 CACTCACATTTTGATAATTTTCAGTGA 57.318 29.630 13.90 13.90 32.17 3.41
2667 5782 9.647797 TTTGTCTTTTTATACATAGCTCTTCGA 57.352 29.630 0.00 0.00 0.00 3.71
2668 5783 9.647797 TTGTCTTTTTATACATAGCTCTTCGAA 57.352 29.630 0.00 0.00 0.00 3.71
2669 5784 9.817809 TGTCTTTTTATACATAGCTCTTCGAAT 57.182 29.630 0.00 0.00 0.00 3.34
2680 5795 9.209175 ACATAGCTCTTCGAATATTATTTGACC 57.791 33.333 0.00 0.00 0.00 4.02
2681 5796 9.208022 CATAGCTCTTCGAATATTATTTGACCA 57.792 33.333 0.00 0.00 0.00 4.02
2682 5797 9.950496 ATAGCTCTTCGAATATTATTTGACCAT 57.050 29.630 0.00 0.00 0.00 3.55
2683 5798 8.316640 AGCTCTTCGAATATTATTTGACCATC 57.683 34.615 0.00 0.00 0.00 3.51
2684 5799 7.933577 AGCTCTTCGAATATTATTTGACCATCA 59.066 33.333 0.00 0.00 0.00 3.07
2685 5800 8.559536 GCTCTTCGAATATTATTTGACCATCAA 58.440 33.333 0.00 0.00 34.03 2.57
2696 5811 3.096489 TGACCATCAAACTTTGCAAGC 57.904 42.857 0.00 0.00 0.00 4.01
2697 5812 2.429971 TGACCATCAAACTTTGCAAGCA 59.570 40.909 0.00 0.00 0.00 3.91
2698 5813 2.796593 GACCATCAAACTTTGCAAGCAC 59.203 45.455 0.00 0.00 0.00 4.40
2699 5814 2.137523 CCATCAAACTTTGCAAGCACC 58.862 47.619 0.00 0.00 0.00 5.01
2700 5815 2.137523 CATCAAACTTTGCAAGCACCC 58.862 47.619 0.00 0.00 0.00 4.61
2701 5816 1.189752 TCAAACTTTGCAAGCACCCA 58.810 45.000 0.00 0.00 0.00 4.51
2702 5817 1.761784 TCAAACTTTGCAAGCACCCAT 59.238 42.857 0.00 0.00 0.00 4.00
2703 5818 2.961741 TCAAACTTTGCAAGCACCCATA 59.038 40.909 0.00 0.00 0.00 2.74
2704 5819 3.386078 TCAAACTTTGCAAGCACCCATAA 59.614 39.130 0.00 0.00 0.00 1.90
2705 5820 3.385193 AACTTTGCAAGCACCCATAAC 57.615 42.857 0.00 0.00 0.00 1.89
2706 5821 2.315176 ACTTTGCAAGCACCCATAACA 58.685 42.857 0.00 0.00 0.00 2.41
2707 5822 2.899256 ACTTTGCAAGCACCCATAACAT 59.101 40.909 0.00 0.00 0.00 2.71
2708 5823 3.255725 CTTTGCAAGCACCCATAACATG 58.744 45.455 0.00 0.00 0.00 3.21
2709 5824 1.921982 TGCAAGCACCCATAACATGT 58.078 45.000 0.00 0.00 0.00 3.21
2710 5825 1.545136 TGCAAGCACCCATAACATGTG 59.455 47.619 0.00 0.00 0.00 3.21
2711 5826 1.545582 GCAAGCACCCATAACATGTGT 59.454 47.619 0.00 0.00 32.62 3.72
2712 5827 2.029110 GCAAGCACCCATAACATGTGTT 60.029 45.455 0.00 3.64 41.73 3.32
2713 5828 3.577667 CAAGCACCCATAACATGTGTTG 58.422 45.455 0.00 0.00 38.90 3.33
2714 5829 3.153369 AGCACCCATAACATGTGTTGA 57.847 42.857 0.00 0.00 38.90 3.18
2715 5830 3.700538 AGCACCCATAACATGTGTTGAT 58.299 40.909 0.00 0.00 38.90 2.57
2716 5831 3.444742 AGCACCCATAACATGTGTTGATG 59.555 43.478 0.00 1.28 38.90 3.07
2717 5832 3.443329 GCACCCATAACATGTGTTGATGA 59.557 43.478 0.00 0.00 38.90 2.92
2718 5833 4.098349 GCACCCATAACATGTGTTGATGAT 59.902 41.667 0.00 0.00 38.90 2.45
2719 5834 5.734220 GCACCCATAACATGTGTTGATGATC 60.734 44.000 0.00 0.00 38.90 2.92
2720 5835 5.357596 CACCCATAACATGTGTTGATGATCA 59.642 40.000 0.00 0.00 38.90 2.92
2721 5836 6.040054 CACCCATAACATGTGTTGATGATCAT 59.960 38.462 8.25 8.25 38.90 2.45
2722 5837 6.608405 ACCCATAACATGTGTTGATGATCATT 59.392 34.615 10.14 0.00 38.90 2.57
2723 5838 7.143340 CCCATAACATGTGTTGATGATCATTC 58.857 38.462 10.14 4.08 38.90 2.67
2724 5839 7.143340 CCATAACATGTGTTGATGATCATTCC 58.857 38.462 10.14 0.00 38.90 3.01
2725 5840 5.587388 AACATGTGTTGATGATCATTCCC 57.413 39.130 10.14 0.00 36.80 3.97
2726 5841 4.602107 ACATGTGTTGATGATCATTCCCA 58.398 39.130 10.14 0.14 0.00 4.37
2727 5842 4.400251 ACATGTGTTGATGATCATTCCCAC 59.600 41.667 10.14 15.49 0.00 4.61
2728 5843 4.031636 TGTGTTGATGATCATTCCCACA 57.968 40.909 21.54 21.54 0.00 4.17
2729 5844 4.405548 TGTGTTGATGATCATTCCCACAA 58.594 39.130 22.44 14.38 0.00 3.33
2730 5845 4.831710 TGTGTTGATGATCATTCCCACAAA 59.168 37.500 22.44 11.85 0.00 2.83
2731 5846 5.047872 TGTGTTGATGATCATTCCCACAAAG 60.048 40.000 22.44 0.00 0.00 2.77
2732 5847 5.047802 GTGTTGATGATCATTCCCACAAAGT 60.048 40.000 10.14 0.00 0.00 2.66
2733 5848 5.539574 TGTTGATGATCATTCCCACAAAGTT 59.460 36.000 10.14 0.00 0.00 2.66
2734 5849 6.041865 TGTTGATGATCATTCCCACAAAGTTT 59.958 34.615 10.14 0.00 0.00 2.66
2735 5850 6.271488 TGATGATCATTCCCACAAAGTTTC 57.729 37.500 10.14 0.00 0.00 2.78
2736 5851 5.774184 TGATGATCATTCCCACAAAGTTTCA 59.226 36.000 10.14 0.00 0.00 2.69
2737 5852 5.710513 TGATCATTCCCACAAAGTTTCAG 57.289 39.130 0.00 0.00 0.00 3.02
2738 5853 5.384336 TGATCATTCCCACAAAGTTTCAGA 58.616 37.500 0.00 0.00 0.00 3.27
2739 5854 5.832595 TGATCATTCCCACAAAGTTTCAGAA 59.167 36.000 0.00 0.00 0.00 3.02
2740 5855 6.494491 TGATCATTCCCACAAAGTTTCAGAAT 59.506 34.615 0.00 0.00 0.00 2.40
2741 5856 6.729690 TCATTCCCACAAAGTTTCAGAATT 57.270 33.333 0.00 0.00 0.00 2.17
2742 5857 7.123355 TCATTCCCACAAAGTTTCAGAATTT 57.877 32.000 0.00 0.00 0.00 1.82
2743 5858 7.563906 TCATTCCCACAAAGTTTCAGAATTTT 58.436 30.769 0.00 0.00 0.00 1.82
2744 5859 8.046107 TCATTCCCACAAAGTTTCAGAATTTTT 58.954 29.630 0.00 0.00 0.00 1.94
2770 5885 7.468922 AAAGTCTTTTGCTATGTTTTCTTGC 57.531 32.000 0.00 0.00 0.00 4.01
2771 5886 5.215160 AGTCTTTTGCTATGTTTTCTTGCG 58.785 37.500 0.00 0.00 0.00 4.85
2772 5887 4.976116 GTCTTTTGCTATGTTTTCTTGCGT 59.024 37.500 0.00 0.00 0.00 5.24
2773 5888 4.975502 TCTTTTGCTATGTTTTCTTGCGTG 59.024 37.500 0.00 0.00 0.00 5.34
2774 5889 2.987413 TGCTATGTTTTCTTGCGTGG 57.013 45.000 0.00 0.00 0.00 4.94
2775 5890 1.539388 TGCTATGTTTTCTTGCGTGGG 59.461 47.619 0.00 0.00 0.00 4.61
2776 5891 1.539827 GCTATGTTTTCTTGCGTGGGT 59.460 47.619 0.00 0.00 0.00 4.51
2777 5892 2.668279 GCTATGTTTTCTTGCGTGGGTG 60.668 50.000 0.00 0.00 0.00 4.61
2778 5893 0.031994 ATGTTTTCTTGCGTGGGTGC 59.968 50.000 0.00 0.00 0.00 5.01
2779 5894 1.315981 TGTTTTCTTGCGTGGGTGCA 61.316 50.000 0.00 0.00 44.61 4.57
2780 5895 0.869880 GTTTTCTTGCGTGGGTGCAC 60.870 55.000 8.80 8.80 46.25 4.57
2781 5896 2.010582 TTTTCTTGCGTGGGTGCACC 62.011 55.000 28.57 28.57 46.25 5.01
2945 6323 4.651045 TGCTACTCCTCATGTCATGTATGT 59.349 41.667 12.54 9.75 0.00 2.29
3014 7011 0.893727 AAACCACGGCTAGGGCTTTG 60.894 55.000 0.00 0.00 38.73 2.77
3056 7053 2.168936 CCCCAAGTACATGCATGCAATT 59.831 45.455 26.68 16.63 0.00 2.32
3066 7063 3.591196 TGCATGCAATTCCCAGTAAAC 57.409 42.857 20.30 0.00 0.00 2.01
3070 7067 4.754114 GCATGCAATTCCCAGTAAACAAAA 59.246 37.500 14.21 0.00 0.00 2.44
3071 7068 5.412286 GCATGCAATTCCCAGTAAACAAAAT 59.588 36.000 14.21 0.00 0.00 1.82
3119 7121 5.161358 CCCTTCAAGCCGAAAGAAAATAAC 58.839 41.667 0.00 0.00 31.71 1.89
3250 7253 5.765677 GGGGAAGTATCCTAAGAAGAAATGC 59.234 44.000 0.00 0.00 45.77 3.56
3272 7275 7.395190 TGCATTAGTGGCATTGATATTATCC 57.605 36.000 0.00 0.00 36.11 2.59
3406 7410 9.883142 AACCTAAACAAAATCAAAACAATGAGA 57.117 25.926 0.00 0.00 31.76 3.27
3435 7439 5.904362 AAGGAAGAATGAATTAGTGGCAC 57.096 39.130 10.29 10.29 0.00 5.01
3558 7614 9.342308 CTAAGAAGGAATGAATTAGTGGCATTA 57.658 33.333 0.00 0.00 32.80 1.90
3802 7868 7.595488 ACTCCCTTCCATCCATATTAATTGTT 58.405 34.615 0.00 0.00 0.00 2.83
3804 7870 6.782000 TCCCTTCCATCCATATTAATTGTTGG 59.218 38.462 0.00 0.00 0.00 3.77
3846 7912 9.243105 TCAAATAATGAGGTTTTCTAAGGAAGG 57.757 33.333 0.00 0.00 33.04 3.46
3867 7933 8.956426 GGAAGGATGAATTAGTGACATTTGTAA 58.044 33.333 0.00 0.00 0.00 2.41
4572 8730 2.347150 TGCGTATACATTTGCACTCACG 59.653 45.455 3.32 0.00 31.31 4.35
4640 8833 8.862325 AAAGAAAAACAAAAACAGAGGGAAAT 57.138 26.923 0.00 0.00 0.00 2.17
4794 8990 4.420522 AAAGGAGCAAAAATCAAAGGCA 57.579 36.364 0.00 0.00 0.00 4.75
4799 8995 5.066375 AGGAGCAAAAATCAAAGGCAAAAAC 59.934 36.000 0.00 0.00 0.00 2.43
4881 9079 1.135972 CCGTTCACTGCCGAAAGATTG 60.136 52.381 0.00 0.00 0.00 2.67
4894 9094 5.569413 CCGAAAGATTGTTTTTCTATCCGG 58.431 41.667 0.00 0.00 33.44 5.14
4896 9096 5.353123 CGAAAGATTGTTTTTCTATCCGGGA 59.647 40.000 0.00 0.00 33.44 5.14
4961 9169 5.689819 ACGATTTGTGCAGATTTTGTAGTC 58.310 37.500 0.00 0.00 0.00 2.59
5070 9775 4.260620 CGGCAAATAGTTTAAGCTACGCAT 60.261 41.667 14.79 0.00 0.00 4.73
5099 9804 1.847798 AAGACATGGCGGCCCACTTA 61.848 55.000 17.97 0.00 45.77 2.24
5312 10064 9.421806 TCATTTTATTTCTGTAGTGCCAAATTG 57.578 29.630 0.00 0.00 0.00 2.32
5403 10170 8.730970 TTCGAAAAATATTCTGGTTTTAACGG 57.269 30.769 0.00 0.00 33.03 4.44
5408 10175 9.819267 AAAAATATTCTGGTTTTAACGGTTTCA 57.181 25.926 0.00 0.00 0.00 2.69
5499 10272 0.653636 TTTTGTGCGTCCGTCTGTTC 59.346 50.000 0.00 0.00 0.00 3.18
5528 10305 4.142038 AGCAACCCTGATTTTCGTACTTT 58.858 39.130 0.00 0.00 0.00 2.66
5587 10364 0.036732 ATTTGCCTCCTCACGAAGCA 59.963 50.000 0.00 0.00 36.10 3.91
5648 10425 1.037493 TATTCGCACAGGACGCCTAT 58.963 50.000 0.00 0.00 29.64 2.57
5672 10450 2.239812 GCCGGCCCGTTACGTTATC 61.240 63.158 18.11 0.00 0.00 1.75
5673 10451 1.438814 CCGGCCCGTTACGTTATCT 59.561 57.895 0.85 0.00 0.00 1.98
6328 11185 2.898840 CCATGGCTAGCAGCACGG 60.899 66.667 18.24 4.22 44.75 4.94
6365 11222 2.345641 GGTCATGTGTTCGATCGTTCAG 59.654 50.000 15.94 4.71 0.00 3.02
6422 11280 1.981256 ACAAAGGTCATTTCGGTGCT 58.019 45.000 0.00 0.00 0.00 4.40
6751 11620 5.105351 GGAATAGTCCCACCTTGGAATTTTG 60.105 44.000 0.00 0.00 40.96 2.44
6800 11671 5.407387 TGTCGCTAAGTTGTCTGGAAATAAC 59.593 40.000 0.00 0.00 0.00 1.89
7111 11988 5.738118 ACAAAATTTGTGCACTCCAATTG 57.262 34.783 19.41 18.24 43.48 2.32
7129 12006 5.407387 CCAATTGGTAATCTATCCGGTTACG 59.593 44.000 16.90 0.00 40.55 3.18
7413 12291 6.040729 TGTGGGGAATGCTGACATATTATTTG 59.959 38.462 0.00 0.00 34.62 2.32
7986 12865 2.626266 TGTAGCTCTTTGAAGTCCGACA 59.374 45.455 0.40 0.00 0.00 4.35
7987 12866 2.910688 AGCTCTTTGAAGTCCGACAA 57.089 45.000 0.40 0.00 0.00 3.18
8022 12902 9.763465 GAACGATTTATTTTTCGACAATTCCTA 57.237 29.630 0.00 0.00 38.67 2.94
8190 13075 0.104304 GCCGATGACACCTAACCGAT 59.896 55.000 0.00 0.00 0.00 4.18
8361 13246 1.299850 CGTGGAAGAGTGTGTGCGA 60.300 57.895 0.00 0.00 0.00 5.10
8425 13310 2.143925 GCACGGGCATATTTCCTAGTC 58.856 52.381 3.77 0.00 40.72 2.59
8439 13324 4.377839 TCCTAGTCAATTCTCAAGCGAG 57.622 45.455 0.00 0.00 40.98 5.03
8503 13389 6.673537 ACAATGTCCATTTTGGGGAAGATATT 59.326 34.615 0.00 0.00 38.32 1.28
8578 13467 1.285667 AGTGGGTCATGCATGATTGGA 59.714 47.619 30.89 13.54 39.30 3.53
8963 13856 1.133915 GGGTGTTGTGTTCCCAAGAGA 60.134 52.381 0.00 0.00 40.79 3.10
9059 13952 4.693566 TCACAAAAGACATGAATCCGGTAC 59.306 41.667 0.00 0.00 0.00 3.34
9109 14002 1.813337 CGTGCACACACTCCACACA 60.813 57.895 18.64 0.00 45.10 3.72
9118 14011 2.140792 ACTCCACACAGACGGGCTT 61.141 57.895 0.00 0.00 0.00 4.35
9120 14013 2.669569 CCACACAGACGGGCTTGG 60.670 66.667 0.00 0.00 0.00 3.61
9143 14036 1.252175 ATACGCCAACACCAATGCAA 58.748 45.000 0.00 0.00 0.00 4.08
9227 14123 1.080995 CGCTTGCTGGTAGCTCAGTC 61.081 60.000 4.51 0.00 42.97 3.51
9234 14130 2.665165 CTGGTAGCTCAGTCTGATCCT 58.335 52.381 2.22 5.78 0.00 3.24
9255 14151 1.831736 GCTCTCCTAGTTTACCTGCCA 59.168 52.381 0.00 0.00 0.00 4.92
9335 14231 3.243636 GGCATGACAAATGAAGGCCATAG 60.244 47.826 5.01 0.00 39.66 2.23
9379 14275 3.585289 TGTGTTGGAAGTATGCCCTAGAA 59.415 43.478 0.00 0.00 24.52 2.10
9458 14354 4.941263 TGTTATAACTGTTGTGATCCTGCC 59.059 41.667 16.33 0.00 0.00 4.85
9459 14355 2.093306 TAACTGTTGTGATCCTGCCG 57.907 50.000 2.69 0.00 0.00 5.69
9460 14356 0.108585 AACTGTTGTGATCCTGCCGT 59.891 50.000 0.00 0.00 0.00 5.68
9461 14357 0.108585 ACTGTTGTGATCCTGCCGTT 59.891 50.000 0.00 0.00 0.00 4.44
9462 14358 0.518636 CTGTTGTGATCCTGCCGTTG 59.481 55.000 0.00 0.00 0.00 4.10
9463 14359 0.888736 TGTTGTGATCCTGCCGTTGG 60.889 55.000 0.00 0.00 0.00 3.77
9464 14360 1.303236 TTGTGATCCTGCCGTTGGG 60.303 57.895 0.00 0.00 0.00 4.12
9465 14361 1.773856 TTGTGATCCTGCCGTTGGGA 61.774 55.000 0.00 0.00 35.96 4.37
9466 14362 1.002624 GTGATCCTGCCGTTGGGAA 60.003 57.895 0.00 0.00 35.08 3.97
9467 14363 0.608035 GTGATCCTGCCGTTGGGAAA 60.608 55.000 0.00 0.00 35.08 3.13
9468 14364 0.608035 TGATCCTGCCGTTGGGAAAC 60.608 55.000 0.00 0.00 35.08 2.78
9469 14365 1.644786 GATCCTGCCGTTGGGAAACG 61.645 60.000 4.09 4.09 45.04 3.60
9470 14366 2.406002 ATCCTGCCGTTGGGAAACGT 62.406 55.000 9.81 0.00 44.04 3.99
9471 14367 1.301874 CCTGCCGTTGGGAAACGTA 60.302 57.895 9.81 0.00 44.04 3.57
9472 14368 1.296056 CCTGCCGTTGGGAAACGTAG 61.296 60.000 9.81 7.59 44.04 3.51
9473 14369 1.908066 CTGCCGTTGGGAAACGTAGC 61.908 60.000 9.81 7.55 44.04 3.58
9474 14370 1.962306 GCCGTTGGGAAACGTAGCA 60.962 57.895 9.81 0.00 44.04 3.49
9475 14371 1.303091 GCCGTTGGGAAACGTAGCAT 61.303 55.000 9.81 0.00 44.04 3.79
9476 14372 0.446222 CCGTTGGGAAACGTAGCATG 59.554 55.000 9.81 0.00 44.04 4.06
9477 14373 0.179200 CGTTGGGAAACGTAGCATGC 60.179 55.000 10.51 10.51 40.94 4.06
9478 14374 0.878416 GTTGGGAAACGTAGCATGCA 59.122 50.000 21.98 2.77 0.00 3.96
9479 14375 1.268352 GTTGGGAAACGTAGCATGCAA 59.732 47.619 21.98 0.00 0.00 4.08
9480 14376 1.832883 TGGGAAACGTAGCATGCAAT 58.167 45.000 21.98 1.90 0.00 3.56
9481 14377 2.166829 TGGGAAACGTAGCATGCAATT 58.833 42.857 21.98 6.80 0.00 2.32
9482 14378 2.560542 TGGGAAACGTAGCATGCAATTT 59.439 40.909 21.98 13.67 0.00 1.82
9483 14379 3.179048 GGGAAACGTAGCATGCAATTTC 58.821 45.455 21.98 20.39 0.00 2.17
9484 14380 3.366883 GGGAAACGTAGCATGCAATTTCA 60.367 43.478 21.98 0.00 0.00 2.69
9485 14381 4.233789 GGAAACGTAGCATGCAATTTCAA 58.766 39.130 21.98 0.00 0.00 2.69
9486 14382 4.683781 GGAAACGTAGCATGCAATTTCAAA 59.316 37.500 21.98 0.00 0.00 2.69
9487 14383 5.176590 GGAAACGTAGCATGCAATTTCAAAA 59.823 36.000 21.98 0.00 0.00 2.44
9488 14384 6.292596 GGAAACGTAGCATGCAATTTCAAAAA 60.293 34.615 21.98 0.00 0.00 1.94
9489 14385 6.783892 AACGTAGCATGCAATTTCAAAAAT 57.216 29.167 21.98 0.00 0.00 1.82
9490 14386 6.783892 ACGTAGCATGCAATTTCAAAAATT 57.216 29.167 21.98 0.00 0.00 1.82
9491 14387 7.188468 ACGTAGCATGCAATTTCAAAAATTT 57.812 28.000 21.98 0.00 0.00 1.82
9492 14388 7.290118 ACGTAGCATGCAATTTCAAAAATTTC 58.710 30.769 21.98 0.00 0.00 2.17
9493 14389 6.737750 CGTAGCATGCAATTTCAAAAATTTCC 59.262 34.615 21.98 0.00 0.00 3.13
9494 14390 6.887626 AGCATGCAATTTCAAAAATTTCCT 57.112 29.167 21.98 0.00 0.00 3.36
9495 14391 7.982761 AGCATGCAATTTCAAAAATTTCCTA 57.017 28.000 21.98 0.00 0.00 2.94
9496 14392 7.809665 AGCATGCAATTTCAAAAATTTCCTAC 58.190 30.769 21.98 0.00 0.00 3.18
9497 14393 7.444792 AGCATGCAATTTCAAAAATTTCCTACA 59.555 29.630 21.98 0.00 0.00 2.74
9498 14394 7.534918 GCATGCAATTTCAAAAATTTCCTACAC 59.465 33.333 14.21 0.00 0.00 2.90
9499 14395 8.776470 CATGCAATTTCAAAAATTTCCTACACT 58.224 29.630 0.00 0.00 0.00 3.55
9500 14396 8.364129 TGCAATTTCAAAAATTTCCTACACTC 57.636 30.769 0.00 0.00 0.00 3.51
9501 14397 7.984050 TGCAATTTCAAAAATTTCCTACACTCA 59.016 29.630 0.00 0.00 0.00 3.41
9502 14398 8.275632 GCAATTTCAAAAATTTCCTACACTCAC 58.724 33.333 0.00 0.00 0.00 3.51
9503 14399 8.479280 CAATTTCAAAAATTTCCTACACTCACG 58.521 33.333 0.00 0.00 0.00 4.35
9504 14400 5.103290 TCAAAAATTTCCTACACTCACGC 57.897 39.130 0.00 0.00 0.00 5.34
9505 14401 4.576873 TCAAAAATTTCCTACACTCACGCA 59.423 37.500 0.00 0.00 0.00 5.24
9506 14402 5.066634 TCAAAAATTTCCTACACTCACGCAA 59.933 36.000 0.00 0.00 0.00 4.85
9508 14404 3.678056 ATTTCCTACACTCACGCAAGA 57.322 42.857 0.00 0.00 43.62 3.02
9509 14405 3.678056 TTTCCTACACTCACGCAAGAT 57.322 42.857 0.00 0.00 43.62 2.40
9510 14406 2.941453 TCCTACACTCACGCAAGATC 57.059 50.000 0.00 0.00 43.62 2.75
9511 14407 2.447443 TCCTACACTCACGCAAGATCT 58.553 47.619 0.00 0.00 43.62 2.75
9512 14408 3.617284 TCCTACACTCACGCAAGATCTA 58.383 45.455 0.00 0.00 43.62 1.98
9513 14409 4.207955 TCCTACACTCACGCAAGATCTAT 58.792 43.478 0.00 0.00 43.62 1.98
9514 14410 4.276183 TCCTACACTCACGCAAGATCTATC 59.724 45.833 0.00 0.00 43.62 2.08
9515 14411 4.277174 CCTACACTCACGCAAGATCTATCT 59.723 45.833 0.00 0.00 43.62 1.98
9516 14412 5.470437 CCTACACTCACGCAAGATCTATCTA 59.530 44.000 0.00 0.00 43.62 1.98
9517 14413 5.431420 ACACTCACGCAAGATCTATCTAG 57.569 43.478 0.00 0.00 43.62 2.43
9518 14414 4.277174 ACACTCACGCAAGATCTATCTAGG 59.723 45.833 0.00 0.00 43.62 3.02
9519 14415 4.517075 CACTCACGCAAGATCTATCTAGGA 59.483 45.833 0.00 0.00 43.62 2.94
9520 14416 4.759693 ACTCACGCAAGATCTATCTAGGAG 59.240 45.833 0.00 2.36 43.62 3.69
9521 14417 4.974399 TCACGCAAGATCTATCTAGGAGA 58.026 43.478 0.00 0.00 43.62 3.71
9522 14418 5.565509 TCACGCAAGATCTATCTAGGAGAT 58.434 41.667 0.00 7.55 38.77 2.75
9523 14419 5.414144 TCACGCAAGATCTATCTAGGAGATG 59.586 44.000 11.48 2.82 36.70 2.90
9524 14420 4.157656 ACGCAAGATCTATCTAGGAGATGC 59.842 45.833 11.48 9.81 36.70 3.91
9525 14421 4.157472 CGCAAGATCTATCTAGGAGATGCA 59.843 45.833 11.48 0.00 35.65 3.96
9526 14422 5.163530 CGCAAGATCTATCTAGGAGATGCAT 60.164 44.000 0.00 0.00 35.65 3.96
9527 14423 6.039159 CGCAAGATCTATCTAGGAGATGCATA 59.961 42.308 0.00 0.00 35.65 3.14
9528 14424 7.428020 GCAAGATCTATCTAGGAGATGCATAG 58.572 42.308 0.00 0.00 35.37 2.23
9529 14425 7.428020 CAAGATCTATCTAGGAGATGCATAGC 58.572 42.308 0.00 0.00 35.37 2.97
9530 14426 6.671605 AGATCTATCTAGGAGATGCATAGCA 58.328 40.000 0.00 0.00 38.03 3.49
9531 14427 7.124721 AGATCTATCTAGGAGATGCATAGCAA 58.875 38.462 0.00 0.00 37.47 3.91
9532 14428 6.522625 TCTATCTAGGAGATGCATAGCAAC 57.477 41.667 0.00 0.00 43.62 4.17
9533 14429 3.650070 TCTAGGAGATGCATAGCAACG 57.350 47.619 0.00 0.00 43.62 4.10
9534 14430 3.222603 TCTAGGAGATGCATAGCAACGA 58.777 45.455 0.00 0.00 43.62 3.85
9535 14431 2.522836 AGGAGATGCATAGCAACGAG 57.477 50.000 0.00 0.00 43.62 4.18
9536 14432 2.034878 AGGAGATGCATAGCAACGAGA 58.965 47.619 0.00 0.00 43.62 4.04
9537 14433 2.035704 AGGAGATGCATAGCAACGAGAG 59.964 50.000 0.00 0.00 43.62 3.20
9538 14434 2.402305 GAGATGCATAGCAACGAGAGG 58.598 52.381 0.00 0.00 43.62 3.69
9539 14435 1.069823 AGATGCATAGCAACGAGAGGG 59.930 52.381 0.00 0.00 43.62 4.30
9540 14436 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
9541 14437 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
9542 14438 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
9543 14439 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
9544 14440 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
9545 14441 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
9546 14442 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
9547 14443 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
9548 14444 0.244994 CAACGAGAGGGGAGAGTGTG 59.755 60.000 0.00 0.00 0.00 3.82
9549 14445 0.178958 AACGAGAGGGGAGAGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
9550 14446 0.609681 ACGAGAGGGGAGAGTGTGTC 60.610 60.000 0.00 0.00 0.00 3.67
9551 14447 0.322997 CGAGAGGGGAGAGTGTGTCT 60.323 60.000 0.00 0.00 38.71 3.41
9552 14448 1.065345 CGAGAGGGGAGAGTGTGTCTA 60.065 57.143 0.00 0.00 34.71 2.59
9553 14449 2.371306 GAGAGGGGAGAGTGTGTCTAC 58.629 57.143 0.00 0.00 34.71 2.59
9554 14450 1.096416 GAGGGGAGAGTGTGTCTACG 58.904 60.000 0.00 0.00 36.91 3.51
9555 14451 0.404812 AGGGGAGAGTGTGTCTACGT 59.595 55.000 0.00 0.00 36.91 3.57
9556 14452 1.632409 AGGGGAGAGTGTGTCTACGTA 59.368 52.381 0.00 0.00 36.91 3.57
9557 14453 1.742268 GGGGAGAGTGTGTCTACGTAC 59.258 57.143 0.00 0.00 36.91 3.67
9558 14454 1.742268 GGGAGAGTGTGTCTACGTACC 59.258 57.143 0.00 0.00 36.91 3.34
9559 14455 1.742268 GGAGAGTGTGTCTACGTACCC 59.258 57.143 0.00 0.00 34.71 3.69
9560 14456 2.617532 GGAGAGTGTGTCTACGTACCCT 60.618 54.545 0.00 0.00 34.71 4.34
9561 14457 2.677337 GAGAGTGTGTCTACGTACCCTC 59.323 54.545 0.00 0.00 34.71 4.30
9562 14458 1.396301 GAGTGTGTCTACGTACCCTCG 59.604 57.143 0.00 0.00 0.00 4.63
9563 14459 1.160137 GTGTGTCTACGTACCCTCGT 58.840 55.000 0.00 0.00 45.97 4.18
9564 14460 2.028112 AGTGTGTCTACGTACCCTCGTA 60.028 50.000 0.00 0.00 43.80 3.43
9569 14465 3.362581 TACGTACCCTCGTAGACCG 57.637 57.895 0.00 0.00 43.80 4.79
9570 14466 0.535335 TACGTACCCTCGTAGACCGT 59.465 55.000 0.00 0.00 43.80 4.83
9571 14467 0.321653 ACGTACCCTCGTAGACCGTT 60.322 55.000 0.00 0.00 42.35 4.44
9572 14468 1.066430 ACGTACCCTCGTAGACCGTTA 60.066 52.381 0.00 0.00 42.35 3.18
9573 14469 2.006888 CGTACCCTCGTAGACCGTTAA 58.993 52.381 0.00 0.00 37.94 2.01
9574 14470 2.030946 CGTACCCTCGTAGACCGTTAAG 59.969 54.545 0.00 0.00 37.94 1.85
9575 14471 2.206576 ACCCTCGTAGACCGTTAAGT 57.793 50.000 0.00 0.00 37.94 2.24
9576 14472 1.815003 ACCCTCGTAGACCGTTAAGTG 59.185 52.381 0.00 0.00 37.94 3.16
9577 14473 1.133790 CCCTCGTAGACCGTTAAGTGG 59.866 57.143 0.00 0.00 37.94 4.00
9578 14474 2.086869 CCTCGTAGACCGTTAAGTGGA 58.913 52.381 0.75 0.00 37.94 4.02
9579 14475 2.489329 CCTCGTAGACCGTTAAGTGGAA 59.511 50.000 0.75 0.00 37.94 3.53
9580 14476 3.427233 CCTCGTAGACCGTTAAGTGGAAG 60.427 52.174 0.75 0.00 37.94 3.46
9581 14477 2.095059 TCGTAGACCGTTAAGTGGAAGC 60.095 50.000 0.75 0.00 37.94 3.86
9582 14478 2.257034 GTAGACCGTTAAGTGGAAGCG 58.743 52.381 0.75 0.00 0.00 4.68
9583 14479 0.677842 AGACCGTTAAGTGGAAGCGT 59.322 50.000 0.75 0.00 0.00 5.07
9584 14480 1.069668 AGACCGTTAAGTGGAAGCGTT 59.930 47.619 0.75 0.00 0.00 4.84
9585 14481 1.869132 GACCGTTAAGTGGAAGCGTTT 59.131 47.619 0.75 0.00 0.00 3.60
9586 14482 3.059166 GACCGTTAAGTGGAAGCGTTTA 58.941 45.455 0.75 0.00 0.00 2.01
9587 14483 3.667360 ACCGTTAAGTGGAAGCGTTTAT 58.333 40.909 0.75 0.00 0.00 1.40
9588 14484 3.681417 ACCGTTAAGTGGAAGCGTTTATC 59.319 43.478 0.75 0.00 0.00 1.75
9589 14485 3.680937 CCGTTAAGTGGAAGCGTTTATCA 59.319 43.478 0.00 0.00 0.00 2.15
9590 14486 4.435121 CCGTTAAGTGGAAGCGTTTATCAC 60.435 45.833 9.02 9.02 0.00 3.06
9600 14496 2.071604 CGTTTATCACGCGGTTGATG 57.928 50.000 19.22 4.98 43.37 3.07
9601 14497 1.392168 CGTTTATCACGCGGTTGATGT 59.608 47.619 19.22 1.03 43.37 3.06
9602 14498 2.599527 CGTTTATCACGCGGTTGATGTA 59.400 45.455 19.22 7.19 43.37 2.29
9603 14499 3.301579 CGTTTATCACGCGGTTGATGTAG 60.302 47.826 19.22 7.03 43.37 2.74
9604 14500 3.513680 TTATCACGCGGTTGATGTAGT 57.486 42.857 19.22 0.00 36.84 2.73
9605 14501 1.922570 ATCACGCGGTTGATGTAGTC 58.077 50.000 12.47 0.00 34.79 2.59
9606 14502 0.455464 TCACGCGGTTGATGTAGTCG 60.455 55.000 12.47 0.00 0.00 4.18
9607 14503 0.731514 CACGCGGTTGATGTAGTCGT 60.732 55.000 12.47 0.00 0.00 4.34
9608 14504 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
9609 14505 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
9610 14506 1.202110 CGCGGTTGATGTAGTCGTACT 60.202 52.381 0.00 0.00 0.00 2.73
9611 14507 2.448219 GCGGTTGATGTAGTCGTACTC 58.552 52.381 0.00 0.00 0.00 2.59
9612 14508 2.097142 GCGGTTGATGTAGTCGTACTCT 59.903 50.000 0.00 0.00 0.00 3.24
9613 14509 3.427233 GCGGTTGATGTAGTCGTACTCTT 60.427 47.826 0.00 0.00 0.00 2.85
9614 14510 4.341099 CGGTTGATGTAGTCGTACTCTTC 58.659 47.826 0.00 0.00 0.00 2.87
9615 14511 4.341099 GGTTGATGTAGTCGTACTCTTCG 58.659 47.826 0.00 0.00 0.00 3.79
9616 14512 3.670311 TGATGTAGTCGTACTCTTCGC 57.330 47.619 0.00 0.00 0.00 4.70
9617 14513 2.030091 TGATGTAGTCGTACTCTTCGCG 59.970 50.000 0.00 0.00 0.00 5.87
9618 14514 1.713597 TGTAGTCGTACTCTTCGCGA 58.286 50.000 3.71 3.71 0.00 5.87
9619 14515 2.274437 TGTAGTCGTACTCTTCGCGAT 58.726 47.619 10.88 0.00 37.00 4.58
9620 14516 2.283617 TGTAGTCGTACTCTTCGCGATC 59.716 50.000 10.88 0.00 37.00 3.69
9621 14517 0.656785 AGTCGTACTCTTCGCGATCC 59.343 55.000 10.88 0.00 37.00 3.36
9622 14518 0.653897 GTCGTACTCTTCGCGATCCG 60.654 60.000 10.88 6.45 37.00 4.18
9623 14519 0.807275 TCGTACTCTTCGCGATCCGA 60.807 55.000 10.88 8.82 45.77 4.55
9624 14520 0.235144 CGTACTCTTCGCGATCCGAT 59.765 55.000 10.88 0.00 46.81 4.18
9625 14521 1.722119 CGTACTCTTCGCGATCCGATC 60.722 57.143 10.88 0.00 46.81 3.69
9626 14522 1.263484 GTACTCTTCGCGATCCGATCA 59.737 52.381 10.88 0.00 46.81 2.92
9627 14523 0.955178 ACTCTTCGCGATCCGATCAT 59.045 50.000 10.88 0.00 46.81 2.45
9628 14524 1.334994 CTCTTCGCGATCCGATCATG 58.665 55.000 10.88 0.40 46.81 3.07
9629 14525 0.951558 TCTTCGCGATCCGATCATGA 59.048 50.000 10.88 0.00 46.81 3.07
9630 14526 1.541588 TCTTCGCGATCCGATCATGAT 59.458 47.619 10.88 8.25 46.81 2.45
9631 14527 1.916651 CTTCGCGATCCGATCATGATC 59.083 52.381 23.42 23.42 46.81 2.92
9632 14528 0.171231 TCGCGATCCGATCATGATCC 59.829 55.000 26.30 13.44 41.89 3.36
9633 14529 0.109132 CGCGATCCGATCATGATCCA 60.109 55.000 26.30 15.56 40.02 3.41
9634 14530 1.669795 CGCGATCCGATCATGATCCAA 60.670 52.381 26.30 16.47 40.02 3.53
9635 14531 1.728971 GCGATCCGATCATGATCCAAC 59.271 52.381 26.30 15.38 36.15 3.77
9636 14532 2.341257 CGATCCGATCATGATCCAACC 58.659 52.381 26.30 14.10 36.15 3.77
9637 14533 2.341257 GATCCGATCATGATCCAACCG 58.659 52.381 26.30 16.42 33.94 4.44
9638 14534 1.408969 TCCGATCATGATCCAACCGA 58.591 50.000 26.30 13.09 34.40 4.69
9639 14535 1.970640 TCCGATCATGATCCAACCGAT 59.029 47.619 26.30 0.00 34.40 4.18
9640 14536 2.029020 TCCGATCATGATCCAACCGATC 60.029 50.000 26.30 3.81 46.70 3.69
9641 14537 2.028658 CCGATCATGATCCAACCGATCT 60.029 50.000 26.30 0.00 46.65 2.75
9642 14538 3.193479 CCGATCATGATCCAACCGATCTA 59.807 47.826 26.30 0.00 46.65 1.98
9643 14539 4.419280 CGATCATGATCCAACCGATCTAG 58.581 47.826 26.30 7.17 46.65 2.43
9644 14540 4.082517 CGATCATGATCCAACCGATCTAGT 60.083 45.833 26.30 0.00 46.65 2.57
9645 14541 4.590850 TCATGATCCAACCGATCTAGTG 57.409 45.455 0.00 0.00 46.65 2.74
9646 14542 2.890808 TGATCCAACCGATCTAGTGC 57.109 50.000 1.77 0.00 46.65 4.40
9647 14543 1.412710 TGATCCAACCGATCTAGTGCC 59.587 52.381 1.77 0.00 46.65 5.01
9648 14544 0.389391 ATCCAACCGATCTAGTGCCG 59.611 55.000 0.00 0.00 0.00 5.69
9649 14545 4.790436 GATCCAACCGATCTAGTGCCGG 62.790 59.091 15.05 15.05 43.65 6.13
9650 14546 1.672854 CCAACCGATCTAGTGCCGGA 61.673 60.000 20.71 0.00 45.58 5.14
9651 14547 0.527817 CAACCGATCTAGTGCCGGAC 60.528 60.000 20.71 0.00 45.58 4.79
9652 14548 2.001361 AACCGATCTAGTGCCGGACG 62.001 60.000 20.71 0.00 45.58 4.79
9653 14549 2.331805 CGATCTAGTGCCGGACGG 59.668 66.667 5.05 6.35 38.57 4.79
9654 14550 2.184830 CGATCTAGTGCCGGACGGA 61.185 63.158 15.99 5.52 37.50 4.69
9655 14551 1.359475 GATCTAGTGCCGGACGGAC 59.641 63.158 15.99 9.75 37.50 4.79
9656 14552 2.389866 GATCTAGTGCCGGACGGACG 62.390 65.000 15.99 0.00 37.50 4.79
9674 14570 3.168773 GGCACCTCCGAATTTAGCA 57.831 52.632 0.00 0.00 0.00 3.49
9675 14571 0.733150 GGCACCTCCGAATTTAGCAC 59.267 55.000 0.00 0.00 0.00 4.40
9676 14572 1.448985 GCACCTCCGAATTTAGCACA 58.551 50.000 0.00 0.00 0.00 4.57
9677 14573 1.130561 GCACCTCCGAATTTAGCACAC 59.869 52.381 0.00 0.00 0.00 3.82
9678 14574 1.393539 CACCTCCGAATTTAGCACACG 59.606 52.381 0.00 0.00 0.00 4.49
9679 14575 1.001633 ACCTCCGAATTTAGCACACGT 59.998 47.619 0.00 0.00 0.00 4.49
9680 14576 1.393539 CCTCCGAATTTAGCACACGTG 59.606 52.381 15.48 15.48 0.00 4.49
9691 14587 3.034569 CACACGTGCATCTCGATGA 57.965 52.632 17.22 0.00 41.20 2.92
9692 14588 0.642291 CACACGTGCATCTCGATGAC 59.358 55.000 17.22 5.54 41.20 3.06
9693 14589 0.798389 ACACGTGCATCTCGATGACG 60.798 55.000 17.22 20.03 42.40 4.35
9694 14590 0.798389 CACGTGCATCTCGATGACGT 60.798 55.000 20.86 20.86 46.13 4.34
9695 14591 0.523546 ACGTGCATCTCGATGACGTC 60.524 55.000 20.86 9.11 44.19 4.34
9696 14592 0.248255 CGTGCATCTCGATGACGTCT 60.248 55.000 17.92 1.84 41.20 4.18
9697 14593 1.471964 GTGCATCTCGATGACGTCTC 58.528 55.000 17.92 10.63 41.20 3.36
9698 14594 0.382158 TGCATCTCGATGACGTCTCC 59.618 55.000 17.92 7.37 41.20 3.71
9699 14595 0.665835 GCATCTCGATGACGTCTCCT 59.334 55.000 17.92 1.02 41.20 3.69
9700 14596 1.334599 GCATCTCGATGACGTCTCCTC 60.335 57.143 17.92 9.84 41.20 3.71
9701 14597 1.265635 CATCTCGATGACGTCTCCTCC 59.734 57.143 17.92 0.53 41.20 4.30
9702 14598 0.542333 TCTCGATGACGTCTCCTCCT 59.458 55.000 17.92 0.00 40.69 3.69
9703 14599 1.065345 TCTCGATGACGTCTCCTCCTT 60.065 52.381 17.92 0.00 40.69 3.36
9704 14600 1.332375 CTCGATGACGTCTCCTCCTTC 59.668 57.143 17.92 1.90 40.69 3.46
9705 14601 1.065345 TCGATGACGTCTCCTCCTTCT 60.065 52.381 17.92 0.00 40.69 2.85
9706 14602 1.746220 CGATGACGTCTCCTCCTTCTT 59.254 52.381 17.92 0.00 34.56 2.52
9707 14603 2.478709 CGATGACGTCTCCTCCTTCTTG 60.479 54.545 17.92 0.00 34.56 3.02
9708 14604 2.287977 TGACGTCTCCTCCTTCTTGA 57.712 50.000 17.92 0.00 0.00 3.02
9709 14605 2.808919 TGACGTCTCCTCCTTCTTGAT 58.191 47.619 17.92 0.00 0.00 2.57
9710 14606 2.755655 TGACGTCTCCTCCTTCTTGATC 59.244 50.000 17.92 0.00 0.00 2.92
9711 14607 2.100087 GACGTCTCCTCCTTCTTGATCC 59.900 54.545 8.70 0.00 0.00 3.36
9712 14608 2.103373 CGTCTCCTCCTTCTTGATCCA 58.897 52.381 0.00 0.00 0.00 3.41
9713 14609 2.100584 CGTCTCCTCCTTCTTGATCCAG 59.899 54.545 0.00 0.00 0.00 3.86
9714 14610 2.114616 TCTCCTCCTTCTTGATCCAGC 58.885 52.381 0.00 0.00 0.00 4.85
9715 14611 1.836166 CTCCTCCTTCTTGATCCAGCA 59.164 52.381 0.00 0.00 0.00 4.41
9716 14612 2.238144 CTCCTCCTTCTTGATCCAGCAA 59.762 50.000 0.00 0.00 0.00 3.91
9717 14613 2.238144 TCCTCCTTCTTGATCCAGCAAG 59.762 50.000 0.00 0.00 45.10 4.01
9718 14614 2.015587 CTCCTTCTTGATCCAGCAAGC 58.984 52.381 0.00 0.00 43.78 4.01
9719 14615 1.352017 TCCTTCTTGATCCAGCAAGCA 59.648 47.619 0.00 0.00 43.78 3.91
9720 14616 1.743958 CCTTCTTGATCCAGCAAGCAG 59.256 52.381 0.00 0.00 43.78 4.24
9721 14617 1.743958 CTTCTTGATCCAGCAAGCAGG 59.256 52.381 0.00 0.00 43.78 4.85
9722 14618 0.986527 TCTTGATCCAGCAAGCAGGA 59.013 50.000 8.68 8.68 43.78 3.86
9723 14619 1.065636 TCTTGATCCAGCAAGCAGGAG 60.066 52.381 11.84 0.00 43.78 3.69
9724 14620 0.986527 TTGATCCAGCAAGCAGGAGA 59.013 50.000 11.84 0.00 35.10 3.71
9725 14621 0.540454 TGATCCAGCAAGCAGGAGAG 59.460 55.000 11.84 0.00 35.10 3.20
9726 14622 0.179051 GATCCAGCAAGCAGGAGAGG 60.179 60.000 11.84 0.00 35.10 3.69
9727 14623 0.619832 ATCCAGCAAGCAGGAGAGGA 60.620 55.000 11.84 1.49 35.10 3.71
9728 14624 1.221293 CCAGCAAGCAGGAGAGGAG 59.779 63.158 0.00 0.00 0.00 3.69
9729 14625 1.263342 CCAGCAAGCAGGAGAGGAGA 61.263 60.000 0.00 0.00 0.00 3.71
9730 14626 0.612229 CAGCAAGCAGGAGAGGAGAA 59.388 55.000 0.00 0.00 0.00 2.87
9731 14627 0.903942 AGCAAGCAGGAGAGGAGAAG 59.096 55.000 0.00 0.00 0.00 2.85
9732 14628 0.612744 GCAAGCAGGAGAGGAGAAGT 59.387 55.000 0.00 0.00 0.00 3.01
9733 14629 1.827969 GCAAGCAGGAGAGGAGAAGTA 59.172 52.381 0.00 0.00 0.00 2.24
9734 14630 2.159114 GCAAGCAGGAGAGGAGAAGTAG 60.159 54.545 0.00 0.00 0.00 2.57
9735 14631 3.360867 CAAGCAGGAGAGGAGAAGTAGA 58.639 50.000 0.00 0.00 0.00 2.59
9736 14632 3.960102 CAAGCAGGAGAGGAGAAGTAGAT 59.040 47.826 0.00 0.00 0.00 1.98
9737 14633 3.565307 AGCAGGAGAGGAGAAGTAGATG 58.435 50.000 0.00 0.00 0.00 2.90
9738 14634 2.627699 GCAGGAGAGGAGAAGTAGATGG 59.372 54.545 0.00 0.00 0.00 3.51
9739 14635 3.230134 CAGGAGAGGAGAAGTAGATGGG 58.770 54.545 0.00 0.00 0.00 4.00
9740 14636 3.117322 CAGGAGAGGAGAAGTAGATGGGA 60.117 52.174 0.00 0.00 0.00 4.37
9741 14637 3.732204 AGGAGAGGAGAAGTAGATGGGAT 59.268 47.826 0.00 0.00 0.00 3.85
9742 14638 4.086457 GGAGAGGAGAAGTAGATGGGATC 58.914 52.174 0.00 0.00 0.00 3.36
9743 14639 4.448493 GGAGAGGAGAAGTAGATGGGATCA 60.448 50.000 0.00 0.00 0.00 2.92
9744 14640 4.479158 AGAGGAGAAGTAGATGGGATCAC 58.521 47.826 0.00 0.00 0.00 3.06
9745 14641 4.078922 AGAGGAGAAGTAGATGGGATCACA 60.079 45.833 0.00 0.00 0.00 3.58
9746 14642 4.624913 AGGAGAAGTAGATGGGATCACAA 58.375 43.478 0.00 0.00 0.00 3.33
9747 14643 4.407296 AGGAGAAGTAGATGGGATCACAAC 59.593 45.833 0.00 0.00 0.00 3.32
9748 14644 4.443598 GGAGAAGTAGATGGGATCACAACC 60.444 50.000 0.00 0.00 0.00 3.77
9749 14645 4.104086 AGAAGTAGATGGGATCACAACCA 58.896 43.478 0.00 0.00 41.76 3.67
9750 14646 4.536090 AGAAGTAGATGGGATCACAACCAA 59.464 41.667 0.00 0.00 40.73 3.67
9751 14647 4.222124 AGTAGATGGGATCACAACCAAC 57.778 45.455 0.00 0.64 40.73 3.77
9752 14648 3.587061 AGTAGATGGGATCACAACCAACA 59.413 43.478 0.00 0.00 40.73 3.33
9753 14649 2.795329 AGATGGGATCACAACCAACAC 58.205 47.619 0.00 0.00 40.73 3.32
9754 14650 1.468520 GATGGGATCACAACCAACACG 59.531 52.381 0.00 0.00 40.73 4.49
9755 14651 0.470341 TGGGATCACAACCAACACGA 59.530 50.000 0.00 0.00 32.89 4.35
9756 14652 1.073125 TGGGATCACAACCAACACGAT 59.927 47.619 0.00 0.00 32.89 3.73
9757 14653 1.468520 GGGATCACAACCAACACGATG 59.531 52.381 0.00 0.00 0.00 3.84
9758 14654 1.468520 GGATCACAACCAACACGATGG 59.531 52.381 0.00 0.00 46.38 3.51
9759 14655 0.881118 ATCACAACCAACACGATGGC 59.119 50.000 6.57 0.00 44.75 4.40
9760 14656 0.464554 TCACAACCAACACGATGGCA 60.465 50.000 0.00 0.00 44.75 4.92
9761 14657 0.597568 CACAACCAACACGATGGCAT 59.402 50.000 0.00 0.00 44.75 4.40
9762 14658 0.597568 ACAACCAACACGATGGCATG 59.402 50.000 3.81 0.00 44.75 4.06
9763 14659 0.109179 CAACCAACACGATGGCATGG 60.109 55.000 3.81 6.26 44.75 3.66
9764 14660 0.539438 AACCAACACGATGGCATGGT 60.539 50.000 9.51 9.51 45.97 3.55
9765 14661 1.243342 ACCAACACGATGGCATGGTG 61.243 55.000 32.46 32.46 44.75 4.17
9766 14662 1.507630 CAACACGATGGCATGGTGG 59.492 57.895 35.29 20.99 42.40 4.61
9767 14663 1.074775 AACACGATGGCATGGTGGT 59.925 52.632 35.29 30.74 42.40 4.16
9768 14664 1.243342 AACACGATGGCATGGTGGTG 61.243 55.000 35.29 23.98 42.40 4.17
9769 14665 1.377072 CACGATGGCATGGTGGTGA 60.377 57.895 28.52 0.00 35.65 4.02
9770 14666 0.749091 CACGATGGCATGGTGGTGAT 60.749 55.000 28.52 0.00 35.65 3.06
9771 14667 0.749091 ACGATGGCATGGTGGTGATG 60.749 55.000 14.63 0.00 0.00 3.07
9772 14668 1.449726 CGATGGCATGGTGGTGATGG 61.450 60.000 3.81 0.00 0.00 3.51
9773 14669 0.396139 GATGGCATGGTGGTGATGGT 60.396 55.000 3.81 0.00 0.00 3.55
9774 14670 0.685131 ATGGCATGGTGGTGATGGTG 60.685 55.000 0.00 0.00 0.00 4.17
9775 14671 2.053865 GGCATGGTGGTGATGGTGG 61.054 63.158 0.00 0.00 0.00 4.61
9776 14672 1.304381 GCATGGTGGTGATGGTGGT 60.304 57.895 0.00 0.00 0.00 4.16
9777 14673 1.597797 GCATGGTGGTGATGGTGGTG 61.598 60.000 0.00 0.00 0.00 4.17
9778 14674 0.966875 CATGGTGGTGATGGTGGTGG 60.967 60.000 0.00 0.00 0.00 4.61
9779 14675 1.434513 ATGGTGGTGATGGTGGTGGT 61.435 55.000 0.00 0.00 0.00 4.16
9780 14676 1.603455 GGTGGTGATGGTGGTGGTG 60.603 63.158 0.00 0.00 0.00 4.17
9781 14677 1.603455 GTGGTGATGGTGGTGGTGG 60.603 63.158 0.00 0.00 0.00 4.61
9782 14678 1.772156 TGGTGATGGTGGTGGTGGA 60.772 57.895 0.00 0.00 0.00 4.02
9783 14679 1.356494 TGGTGATGGTGGTGGTGGAA 61.356 55.000 0.00 0.00 0.00 3.53
9784 14680 0.893727 GGTGATGGTGGTGGTGGAAC 60.894 60.000 0.00 0.00 0.00 3.62
9785 14681 0.179004 GTGATGGTGGTGGTGGAACA 60.179 55.000 0.00 0.00 39.98 3.18
9796 14692 2.502093 TGGAACACCGACAACGCT 59.498 55.556 0.00 0.00 38.29 5.07
9797 14693 1.153329 TGGAACACCGACAACGCTT 60.153 52.632 0.00 0.00 38.29 4.68
9798 14694 1.155424 TGGAACACCGACAACGCTTC 61.155 55.000 0.00 0.00 38.29 3.86
9799 14695 1.200839 GAACACCGACAACGCTTCG 59.799 57.895 0.00 0.00 38.29 3.79
9800 14696 2.743871 GAACACCGACAACGCTTCGC 62.744 60.000 0.00 0.00 38.29 4.70
9801 14697 3.036084 CACCGACAACGCTTCGCT 61.036 61.111 0.00 0.00 38.29 4.93
9802 14698 1.731613 CACCGACAACGCTTCGCTA 60.732 57.895 0.00 0.00 38.29 4.26
9803 14699 1.007038 ACCGACAACGCTTCGCTAA 60.007 52.632 0.00 0.00 38.29 3.09
9804 14700 1.007336 ACCGACAACGCTTCGCTAAG 61.007 55.000 0.00 0.00 38.29 2.18
9812 14708 2.923854 CTTCGCTAAGCATCGCCG 59.076 61.111 0.00 0.00 0.00 6.46
9813 14709 2.584970 TTCGCTAAGCATCGCCGG 60.585 61.111 0.00 0.00 0.00 6.13
9814 14710 4.585526 TCGCTAAGCATCGCCGGG 62.586 66.667 2.18 0.00 0.00 5.73
9815 14711 4.585526 CGCTAAGCATCGCCGGGA 62.586 66.667 2.18 0.00 0.00 5.14
9816 14712 2.967615 GCTAAGCATCGCCGGGAC 60.968 66.667 2.18 0.00 0.00 4.46
9829 14725 4.754667 GGGACGAGGCGGTGGAAC 62.755 72.222 0.00 0.00 0.00 3.62
9830 14726 3.692406 GGACGAGGCGGTGGAACT 61.692 66.667 0.00 0.00 36.74 3.01
9831 14727 2.345760 GGACGAGGCGGTGGAACTA 61.346 63.158 0.00 0.00 36.74 2.24
9832 14728 1.673808 GGACGAGGCGGTGGAACTAT 61.674 60.000 0.00 0.00 36.74 2.12
9833 14729 0.527817 GACGAGGCGGTGGAACTATG 60.528 60.000 0.00 0.00 36.74 2.23
9834 14730 1.227263 CGAGGCGGTGGAACTATGG 60.227 63.158 0.00 0.00 36.74 2.74
9835 14731 1.672854 CGAGGCGGTGGAACTATGGA 61.673 60.000 0.00 0.00 36.74 3.41
9836 14732 0.105039 GAGGCGGTGGAACTATGGAG 59.895 60.000 0.00 0.00 36.74 3.86
9837 14733 0.617820 AGGCGGTGGAACTATGGAGT 60.618 55.000 0.00 0.00 37.59 3.85
9838 14734 1.117150 GGCGGTGGAACTATGGAGTA 58.883 55.000 0.00 0.00 33.58 2.59
9839 14735 1.483415 GGCGGTGGAACTATGGAGTAA 59.517 52.381 0.00 0.00 33.58 2.24
9840 14736 2.104281 GGCGGTGGAACTATGGAGTAAT 59.896 50.000 0.00 0.00 33.58 1.89
9841 14737 3.131396 GCGGTGGAACTATGGAGTAATG 58.869 50.000 0.00 0.00 33.58 1.90
9842 14738 3.728845 CGGTGGAACTATGGAGTAATGG 58.271 50.000 0.00 0.00 33.58 3.16
9843 14739 3.494398 CGGTGGAACTATGGAGTAATGGG 60.494 52.174 0.00 0.00 33.58 4.00
9844 14740 3.714798 GGTGGAACTATGGAGTAATGGGA 59.285 47.826 0.00 0.00 33.58 4.37
9845 14741 4.202367 GGTGGAACTATGGAGTAATGGGAG 60.202 50.000 0.00 0.00 33.58 4.30
9846 14742 4.654262 GTGGAACTATGGAGTAATGGGAGA 59.346 45.833 0.00 0.00 33.58 3.71
9847 14743 4.901849 TGGAACTATGGAGTAATGGGAGAG 59.098 45.833 0.00 0.00 33.58 3.20
9848 14744 5.148502 GGAACTATGGAGTAATGGGAGAGA 58.851 45.833 0.00 0.00 33.58 3.10
9849 14745 5.245075 GGAACTATGGAGTAATGGGAGAGAG 59.755 48.000 0.00 0.00 33.58 3.20
9850 14746 5.671463 ACTATGGAGTAATGGGAGAGAGA 57.329 43.478 0.00 0.00 32.65 3.10
9851 14747 5.640147 ACTATGGAGTAATGGGAGAGAGAG 58.360 45.833 0.00 0.00 32.65 3.20
9852 14748 3.320610 TGGAGTAATGGGAGAGAGAGG 57.679 52.381 0.00 0.00 0.00 3.69
9853 14749 2.091055 TGGAGTAATGGGAGAGAGAGGG 60.091 54.545 0.00 0.00 0.00 4.30
9854 14750 2.604139 GAGTAATGGGAGAGAGAGGGG 58.396 57.143 0.00 0.00 0.00 4.79
9855 14751 1.052617 GTAATGGGAGAGAGAGGGGC 58.947 60.000 0.00 0.00 0.00 5.80
9856 14752 0.470080 TAATGGGAGAGAGAGGGGCG 60.470 60.000 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.967326 TGCTGCATACATACTACTCCCTT 59.033 43.478 0.00 0.00 0.00 3.95
52 53 9.557061 TCATGATCCATTTTCAAAAACAATTGA 57.443 25.926 13.59 0.00 37.53 2.57
63 64 8.905660 AACAAATTTGTCATGATCCATTTTCA 57.094 26.923 23.47 0.00 41.31 2.69
447 462 7.537306 ACTTAGCAAAACAAATGCACGTATAAG 59.463 33.333 0.00 2.90 46.22 1.73
554 569 7.554118 TGTAAATTGGCCATGAAAAAGACAAAA 59.446 29.630 6.09 0.00 0.00 2.44
558 573 6.481644 TGTTGTAAATTGGCCATGAAAAAGAC 59.518 34.615 6.09 0.50 0.00 3.01
559 574 6.586344 TGTTGTAAATTGGCCATGAAAAAGA 58.414 32.000 6.09 0.00 0.00 2.52
560 575 6.857777 TGTTGTAAATTGGCCATGAAAAAG 57.142 33.333 6.09 0.00 0.00 2.27
561 576 8.908786 TTATGTTGTAAATTGGCCATGAAAAA 57.091 26.923 6.09 0.00 0.00 1.94
722 2510 0.247655 CGAACCATTGGCGAATGTCG 60.248 55.000 18.58 17.24 43.89 4.35
760 2548 5.132502 CCCAAATATCTGGCTGACATTGTA 58.867 41.667 0.00 0.00 34.88 2.41
786 2574 2.432510 CCTCCGTCTGCCTTATCTCTTT 59.567 50.000 0.00 0.00 0.00 2.52
831 2619 1.649171 GCGTTCAGTAGTCACACATCG 59.351 52.381 0.00 0.00 0.00 3.84
838 2626 0.949397 ACTCACGCGTTCAGTAGTCA 59.051 50.000 10.22 0.00 0.00 3.41
861 2649 0.322322 AATTTACACCGGTCGCCTCA 59.678 50.000 2.59 0.00 0.00 3.86
867 2655 3.394313 CGGCTAAAATTTACACCGGTC 57.606 47.619 2.59 0.00 37.04 4.79
870 2658 2.222863 CGACCGGCTAAAATTTACACCG 60.223 50.000 15.19 15.19 40.30 4.94
871 2659 2.096335 CCGACCGGCTAAAATTTACACC 59.904 50.000 0.00 0.00 0.00 4.16
942 2730 3.361786 GGACTAGGCAGAGAAGAGAACT 58.638 50.000 0.00 0.00 0.00 3.01
964 2752 2.446435 TCAGATGTGGCTTTTAAGGGC 58.554 47.619 0.00 0.00 0.00 5.19
968 2756 6.489700 TGTTCTTGATCAGATGTGGCTTTTAA 59.510 34.615 0.00 0.00 0.00 1.52
1158 2956 1.048724 CGGCAATCTGGGAGAGGGTA 61.049 60.000 0.00 0.00 0.00 3.69
1882 3881 1.353022 ACGGGTTGCCTAGGAATTGAA 59.647 47.619 14.75 0.00 0.00 2.69
1928 5043 1.368641 TTCCGTGTGTATGCATGCTC 58.631 50.000 20.33 12.69 0.00 4.26
1929 5044 1.739466 CTTTCCGTGTGTATGCATGCT 59.261 47.619 20.33 7.07 0.00 3.79
1965 5080 3.423154 CTTTCCGTGTCCGCTGCC 61.423 66.667 0.00 0.00 0.00 4.85
2492 5607 2.912771 CATTTGGCCTCCACATACGTA 58.087 47.619 3.32 0.00 30.78 3.57
2493 5608 1.750193 CATTTGGCCTCCACATACGT 58.250 50.000 3.32 0.00 30.78 3.57
2494 5609 0.381801 GCATTTGGCCTCCACATACG 59.618 55.000 3.32 0.00 36.11 3.06
2495 5610 1.473258 TGCATTTGGCCTCCACATAC 58.527 50.000 3.32 0.00 43.89 2.39
2496 5611 1.824230 GTTGCATTTGGCCTCCACATA 59.176 47.619 3.32 0.00 43.89 2.29
2497 5612 0.609662 GTTGCATTTGGCCTCCACAT 59.390 50.000 3.32 0.00 43.89 3.21
2498 5613 0.758310 TGTTGCATTTGGCCTCCACA 60.758 50.000 3.32 0.00 43.89 4.17
2499 5614 0.319813 GTGTTGCATTTGGCCTCCAC 60.320 55.000 3.32 0.00 43.89 4.02
2500 5615 0.758310 TGTGTTGCATTTGGCCTCCA 60.758 50.000 3.32 0.00 43.89 3.86
2501 5616 0.609662 ATGTGTTGCATTTGGCCTCC 59.390 50.000 3.32 0.00 43.89 4.30
2519 5634 5.473066 AACTTTGCAAGCTTCCATAACAT 57.527 34.783 0.00 0.00 0.00 2.71
2521 5636 4.448732 CCAAACTTTGCAAGCTTCCATAAC 59.551 41.667 0.00 0.00 0.00 1.89
2522 5637 4.100808 ACCAAACTTTGCAAGCTTCCATAA 59.899 37.500 0.00 0.00 0.00 1.90
2523 5638 3.640967 ACCAAACTTTGCAAGCTTCCATA 59.359 39.130 0.00 0.00 0.00 2.74
2524 5639 2.435437 ACCAAACTTTGCAAGCTTCCAT 59.565 40.909 0.00 0.00 0.00 3.41
2525 5640 1.830477 ACCAAACTTTGCAAGCTTCCA 59.170 42.857 0.00 0.00 0.00 3.53
2526 5641 2.204237 CACCAAACTTTGCAAGCTTCC 58.796 47.619 0.00 0.00 0.00 3.46
2527 5642 2.204237 CCACCAAACTTTGCAAGCTTC 58.796 47.619 0.00 0.00 0.00 3.86
2528 5643 1.554617 ACCACCAAACTTTGCAAGCTT 59.445 42.857 0.00 0.00 0.00 3.74
2533 5648 3.902881 ATTTGACCACCAAACTTTGCA 57.097 38.095 0.00 0.00 46.41 4.08
2534 5649 5.112686 TGTTATTTGACCACCAAACTTTGC 58.887 37.500 0.00 0.00 46.41 3.68
2535 5650 7.784633 AATGTTATTTGACCACCAAACTTTG 57.215 32.000 0.00 0.00 46.41 2.77
2537 5652 7.560368 TCAAATGTTATTTGACCACCAAACTT 58.440 30.769 11.71 0.00 46.41 2.66
2539 5654 6.423604 CCTCAAATGTTATTTGACCACCAAAC 59.576 38.462 11.71 0.00 46.41 2.93
2542 5657 5.389520 TCCTCAAATGTTATTTGACCACCA 58.610 37.500 11.71 0.00 34.96 4.17
2543 5658 5.622233 GCTCCTCAAATGTTATTTGACCACC 60.622 44.000 11.71 0.84 34.96 4.61
2544 5659 5.183904 AGCTCCTCAAATGTTATTTGACCAC 59.816 40.000 11.71 4.25 34.96 4.16
2546 5661 5.904362 AGCTCCTCAAATGTTATTTGACC 57.096 39.130 11.71 3.45 34.96 4.02
2547 5662 7.147976 ACAAAGCTCCTCAAATGTTATTTGAC 58.852 34.615 11.71 4.40 34.96 3.18
2548 5663 7.288810 ACAAAGCTCCTCAAATGTTATTTGA 57.711 32.000 14.22 14.22 36.98 2.69
2549 5664 8.081633 TGTACAAAGCTCCTCAAATGTTATTTG 58.918 33.333 7.73 7.73 0.00 2.32
2550 5665 8.177119 TGTACAAAGCTCCTCAAATGTTATTT 57.823 30.769 0.00 0.00 0.00 1.40
2551 5666 7.759489 TGTACAAAGCTCCTCAAATGTTATT 57.241 32.000 0.00 0.00 0.00 1.40
2552 5667 7.759489 TTGTACAAAGCTCCTCAAATGTTAT 57.241 32.000 5.64 0.00 0.00 1.89
2553 5668 7.575414 TTTGTACAAAGCTCCTCAAATGTTA 57.425 32.000 17.01 0.00 0.00 2.41
2555 5670 6.463995 TTTTGTACAAAGCTCCTCAAATGT 57.536 33.333 19.72 0.00 0.00 2.71
2586 5701 8.819974 CACTGTTTGAGCAGATTTTGTATTTTT 58.180 29.630 1.73 0.00 39.62 1.94
2587 5702 7.042523 GCACTGTTTGAGCAGATTTTGTATTTT 60.043 33.333 1.73 0.00 39.62 1.82
2588 5703 6.421801 GCACTGTTTGAGCAGATTTTGTATTT 59.578 34.615 1.73 0.00 39.62 1.40
2589 5704 5.922544 GCACTGTTTGAGCAGATTTTGTATT 59.077 36.000 1.73 0.00 39.62 1.89
2590 5705 5.009911 TGCACTGTTTGAGCAGATTTTGTAT 59.990 36.000 1.73 0.00 37.35 2.29
2591 5706 4.337836 TGCACTGTTTGAGCAGATTTTGTA 59.662 37.500 1.73 0.00 37.35 2.41
2592 5707 3.130869 TGCACTGTTTGAGCAGATTTTGT 59.869 39.130 1.73 0.00 37.35 2.83
2593 5708 3.488310 GTGCACTGTTTGAGCAGATTTTG 59.512 43.478 10.32 0.00 42.56 2.44
2594 5709 3.382546 AGTGCACTGTTTGAGCAGATTTT 59.617 39.130 20.97 0.00 42.56 1.82
2595 5710 2.954318 AGTGCACTGTTTGAGCAGATTT 59.046 40.909 20.97 0.00 42.56 2.17
2596 5711 2.551459 GAGTGCACTGTTTGAGCAGATT 59.449 45.455 27.27 0.00 42.56 2.40
2597 5712 2.149578 GAGTGCACTGTTTGAGCAGAT 58.850 47.619 27.27 0.00 42.56 2.90
2598 5713 1.134431 TGAGTGCACTGTTTGAGCAGA 60.134 47.619 27.27 0.00 42.56 4.26
2599 5714 1.003116 GTGAGTGCACTGTTTGAGCAG 60.003 52.381 27.27 0.00 42.56 4.24
2600 5715 1.016627 GTGAGTGCACTGTTTGAGCA 58.983 50.000 27.27 11.32 41.84 4.26
2601 5716 1.016627 TGTGAGTGCACTGTTTGAGC 58.983 50.000 27.27 8.42 45.36 4.26
2602 5717 3.976793 AATGTGAGTGCACTGTTTGAG 57.023 42.857 27.27 0.00 45.36 3.02
2603 5718 4.157472 TCAAAATGTGAGTGCACTGTTTGA 59.843 37.500 27.27 24.00 45.42 2.69
2604 5719 4.422840 TCAAAATGTGAGTGCACTGTTTG 58.577 39.130 27.27 22.39 45.36 2.93
2605 5720 4.717233 TCAAAATGTGAGTGCACTGTTT 57.283 36.364 27.27 15.90 45.36 2.83
2606 5721 4.924305 ATCAAAATGTGAGTGCACTGTT 57.076 36.364 27.27 10.65 45.36 3.16
2607 5722 6.579666 ATTATCAAAATGTGAGTGCACTGT 57.420 33.333 27.27 0.00 45.36 3.55
2608 5723 7.878477 AAATTATCAAAATGTGAGTGCACTG 57.122 32.000 27.27 8.21 45.36 3.66
2609 5724 8.143193 TGAAAATTATCAAAATGTGAGTGCACT 58.857 29.630 21.88 21.88 45.36 4.40
2610 5725 8.296799 TGAAAATTATCAAAATGTGAGTGCAC 57.703 30.769 9.40 9.40 45.35 4.57
2611 5726 8.143193 ACTGAAAATTATCAAAATGTGAGTGCA 58.857 29.630 0.00 0.00 40.43 4.57
2612 5727 8.430063 CACTGAAAATTATCAAAATGTGAGTGC 58.570 33.333 0.00 0.00 40.43 4.40
2613 5728 9.681692 TCACTGAAAATTATCAAAATGTGAGTG 57.318 29.630 0.00 0.00 40.43 3.51
2641 5756 9.647797 TCGAAGAGCTATGTATAAAAAGACAAA 57.352 29.630 0.00 0.00 0.00 2.83
2642 5757 9.647797 TTCGAAGAGCTATGTATAAAAAGACAA 57.352 29.630 0.00 0.00 38.43 3.18
2643 5758 9.817809 ATTCGAAGAGCTATGTATAAAAAGACA 57.182 29.630 3.35 0.00 38.43 3.41
2654 5769 9.209175 GGTCAAATAATATTCGAAGAGCTATGT 57.791 33.333 3.35 0.00 38.43 2.29
2655 5770 9.208022 TGGTCAAATAATATTCGAAGAGCTATG 57.792 33.333 3.35 0.00 38.43 2.23
2656 5771 9.950496 ATGGTCAAATAATATTCGAAGAGCTAT 57.050 29.630 3.35 0.00 38.43 2.97
2657 5772 9.424319 GATGGTCAAATAATATTCGAAGAGCTA 57.576 33.333 3.35 0.00 38.43 3.32
2658 5773 7.933577 TGATGGTCAAATAATATTCGAAGAGCT 59.066 33.333 3.35 0.00 38.43 4.09
2659 5774 8.087982 TGATGGTCAAATAATATTCGAAGAGC 57.912 34.615 3.35 3.13 38.43 4.09
2667 5782 9.941325 TGCAAAGTTTGATGGTCAAATAATATT 57.059 25.926 19.82 0.00 46.55 1.28
2668 5783 9.941325 TTGCAAAGTTTGATGGTCAAATAATAT 57.059 25.926 19.82 0.00 46.55 1.28
2669 5784 9.421806 CTTGCAAAGTTTGATGGTCAAATAATA 57.578 29.630 19.82 0.00 46.55 0.98
2670 5785 7.095102 GCTTGCAAAGTTTGATGGTCAAATAAT 60.095 33.333 19.82 0.00 46.55 1.28
2671 5786 6.202570 GCTTGCAAAGTTTGATGGTCAAATAA 59.797 34.615 19.82 0.00 46.55 1.40
2672 5787 5.695816 GCTTGCAAAGTTTGATGGTCAAATA 59.304 36.000 19.82 0.00 46.55 1.40
2673 5788 4.512571 GCTTGCAAAGTTTGATGGTCAAAT 59.487 37.500 19.82 0.00 46.55 2.32
2684 5799 8.587072 ACATGTTATGGGTGCTTGCAAAGTTT 62.587 38.462 0.00 0.00 39.64 2.66
2685 5800 7.197924 ACATGTTATGGGTGCTTGCAAAGTT 62.198 40.000 0.00 0.00 39.64 2.66
2686 5801 5.776452 ACATGTTATGGGTGCTTGCAAAGT 61.776 41.667 0.00 0.00 39.64 2.66
2687 5802 3.306225 ACATGTTATGGGTGCTTGCAAAG 60.306 43.478 0.00 0.00 40.18 2.77
2688 5803 2.632028 ACATGTTATGGGTGCTTGCAAA 59.368 40.909 0.00 0.00 33.60 3.68
2689 5804 2.029200 CACATGTTATGGGTGCTTGCAA 60.029 45.455 0.00 0.00 33.60 4.08
2690 5805 1.545136 CACATGTTATGGGTGCTTGCA 59.455 47.619 0.00 0.00 33.60 4.08
2691 5806 2.282701 CACATGTTATGGGTGCTTGC 57.717 50.000 0.00 0.00 33.60 4.01
2698 5813 6.644248 ATGATCATCAACACATGTTATGGG 57.356 37.500 1.18 0.00 40.30 4.00
2699 5814 7.143340 GGAATGATCATCAACACATGTTATGG 58.857 38.462 9.06 0.00 36.32 2.74
2700 5815 7.143340 GGGAATGATCATCAACACATGTTATG 58.857 38.462 9.06 0.00 36.32 1.90
2701 5816 6.834969 TGGGAATGATCATCAACACATGTTAT 59.165 34.615 9.06 0.00 36.32 1.89
2702 5817 6.095300 GTGGGAATGATCATCAACACATGTTA 59.905 38.462 21.82 0.00 36.32 2.41
2703 5818 5.018149 TGGGAATGATCATCAACACATGTT 58.982 37.500 9.06 0.00 39.12 2.71
2704 5819 4.400251 GTGGGAATGATCATCAACACATGT 59.600 41.667 21.82 0.00 0.00 3.21
2705 5820 4.399934 TGTGGGAATGATCATCAACACATG 59.600 41.667 23.92 0.00 31.21 3.21
2706 5821 4.602107 TGTGGGAATGATCATCAACACAT 58.398 39.130 23.92 4.75 31.21 3.21
2707 5822 4.031636 TGTGGGAATGATCATCAACACA 57.968 40.909 23.92 23.92 32.57 3.72
2708 5823 5.047802 ACTTTGTGGGAATGATCATCAACAC 60.048 40.000 20.76 20.76 0.00 3.32
2709 5824 5.078949 ACTTTGTGGGAATGATCATCAACA 58.921 37.500 9.06 4.59 0.00 3.33
2710 5825 5.649782 ACTTTGTGGGAATGATCATCAAC 57.350 39.130 9.06 1.76 0.00 3.18
2711 5826 6.267242 TGAAACTTTGTGGGAATGATCATCAA 59.733 34.615 9.06 5.69 0.00 2.57
2712 5827 5.774184 TGAAACTTTGTGGGAATGATCATCA 59.226 36.000 9.06 0.00 0.00 3.07
2713 5828 6.151648 TCTGAAACTTTGTGGGAATGATCATC 59.848 38.462 9.06 2.77 0.00 2.92
2714 5829 6.012113 TCTGAAACTTTGTGGGAATGATCAT 58.988 36.000 1.18 1.18 0.00 2.45
2715 5830 5.384336 TCTGAAACTTTGTGGGAATGATCA 58.616 37.500 0.00 0.00 0.00 2.92
2716 5831 5.964958 TCTGAAACTTTGTGGGAATGATC 57.035 39.130 0.00 0.00 0.00 2.92
2717 5832 6.923199 ATTCTGAAACTTTGTGGGAATGAT 57.077 33.333 0.00 0.00 0.00 2.45
2718 5833 6.729690 AATTCTGAAACTTTGTGGGAATGA 57.270 33.333 0.00 0.00 0.00 2.57
2719 5834 7.790823 AAAATTCTGAAACTTTGTGGGAATG 57.209 32.000 0.00 0.00 0.00 2.67
2744 5859 9.030301 GCAAGAAAACATAGCAAAAGACTTTAA 57.970 29.630 0.00 0.00 0.00 1.52
2745 5860 7.378461 CGCAAGAAAACATAGCAAAAGACTTTA 59.622 33.333 0.00 0.00 43.02 1.85
2746 5861 6.198966 CGCAAGAAAACATAGCAAAAGACTTT 59.801 34.615 0.00 0.00 43.02 2.66
2747 5862 5.687285 CGCAAGAAAACATAGCAAAAGACTT 59.313 36.000 0.00 0.00 43.02 3.01
2748 5863 5.215160 CGCAAGAAAACATAGCAAAAGACT 58.785 37.500 0.00 0.00 43.02 3.24
2749 5864 4.976116 ACGCAAGAAAACATAGCAAAAGAC 59.024 37.500 0.00 0.00 43.62 3.01
2750 5865 4.975502 CACGCAAGAAAACATAGCAAAAGA 59.024 37.500 0.00 0.00 43.62 2.52
2751 5866 4.148696 CCACGCAAGAAAACATAGCAAAAG 59.851 41.667 0.00 0.00 43.62 2.27
2752 5867 4.047822 CCACGCAAGAAAACATAGCAAAA 58.952 39.130 0.00 0.00 43.62 2.44
2753 5868 3.551863 CCCACGCAAGAAAACATAGCAAA 60.552 43.478 0.00 0.00 43.62 3.68
2754 5869 2.030363 CCCACGCAAGAAAACATAGCAA 60.030 45.455 0.00 0.00 43.62 3.91
2755 5870 1.539388 CCCACGCAAGAAAACATAGCA 59.461 47.619 0.00 0.00 43.62 3.49
2756 5871 1.539827 ACCCACGCAAGAAAACATAGC 59.460 47.619 0.00 0.00 43.62 2.97
2757 5872 2.668279 GCACCCACGCAAGAAAACATAG 60.668 50.000 0.00 0.00 43.62 2.23
2758 5873 1.268352 GCACCCACGCAAGAAAACATA 59.732 47.619 0.00 0.00 43.62 2.29
2759 5874 0.031994 GCACCCACGCAAGAAAACAT 59.968 50.000 0.00 0.00 43.62 2.71
2760 5875 1.315981 TGCACCCACGCAAGAAAACA 61.316 50.000 0.00 0.00 39.45 2.83
2761 5876 0.869880 GTGCACCCACGCAAGAAAAC 60.870 55.000 5.22 0.00 45.14 2.43
2762 5877 1.435515 GTGCACCCACGCAAGAAAA 59.564 52.632 5.22 0.00 45.14 2.29
2763 5878 2.485795 GGTGCACCCACGCAAGAAA 61.486 57.895 26.31 0.00 45.14 2.52
2764 5879 2.904866 GGTGCACCCACGCAAGAA 60.905 61.111 26.31 0.00 45.14 2.52
2773 5888 0.609681 TAAAATGGGACGGTGCACCC 60.610 55.000 29.95 16.75 45.74 4.61
2774 5889 0.524414 GTAAAATGGGACGGTGCACC 59.476 55.000 26.78 26.78 0.00 5.01
2775 5890 0.524414 GGTAAAATGGGACGGTGCAC 59.476 55.000 8.80 8.80 0.00 4.57
2776 5891 0.110678 TGGTAAAATGGGACGGTGCA 59.889 50.000 1.14 0.00 0.00 4.57
2777 5892 0.524414 GTGGTAAAATGGGACGGTGC 59.476 55.000 0.00 0.00 0.00 5.01
2778 5893 1.810151 CAGTGGTAAAATGGGACGGTG 59.190 52.381 0.00 0.00 0.00 4.94
2779 5894 1.271707 CCAGTGGTAAAATGGGACGGT 60.272 52.381 0.00 0.00 0.00 4.83
2780 5895 1.271707 ACCAGTGGTAAAATGGGACGG 60.272 52.381 14.87 0.00 38.48 4.79
2781 5896 2.081462 GACCAGTGGTAAAATGGGACG 58.919 52.381 16.72 0.00 38.48 4.79
2782 5897 2.041216 AGGACCAGTGGTAAAATGGGAC 59.959 50.000 16.72 0.00 38.48 4.46
2783 5898 2.354328 AGGACCAGTGGTAAAATGGGA 58.646 47.619 16.72 0.00 38.48 4.37
2784 5899 2.899303 AGGACCAGTGGTAAAATGGG 57.101 50.000 16.72 0.00 38.48 4.00
2785 5900 4.261801 CACTAGGACCAGTGGTAAAATGG 58.738 47.826 16.72 6.10 41.88 3.16
2847 5964 0.106708 CCATACTGGTGCGTATGCCT 59.893 55.000 4.05 0.00 43.31 4.75
2929 6047 6.169094 GGATCCTTACATACATGACATGAGG 58.831 44.000 22.19 15.76 0.00 3.86
2945 6323 2.016604 GCAATGCACGTGGGATCCTTA 61.017 52.381 18.88 0.00 0.00 2.69
2997 6994 2.351276 CAAAGCCCTAGCCGTGGT 59.649 61.111 0.00 0.00 41.25 4.16
3014 7011 5.839606 GGGGTACTCCTATATATCCATCACC 59.160 48.000 3.84 0.00 35.33 4.02
3087 7088 3.558033 TCGGCTTGAAGGGTTAGTTTTT 58.442 40.909 0.00 0.00 0.00 1.94
3119 7121 8.614469 TTGGCCCTTCTTTGTTTTAATTTATG 57.386 30.769 0.00 0.00 0.00 1.90
3335 7338 6.440965 AGAGTAATACCAAAGCCACTAACTCT 59.559 38.462 0.00 0.00 36.15 3.24
3411 7415 7.349598 AGTGCCACTAATTCATTCTTCCTTAT 58.650 34.615 0.00 0.00 0.00 1.73
3603 7659 9.787435 TTCCTAGAAAACTCATTACTTTGCTTA 57.213 29.630 0.00 0.00 0.00 3.09
3919 7985 7.915508 TCGCAACTTTTGTGTATATTCTATGG 58.084 34.615 0.00 0.00 41.72 2.74
4004 8070 8.348507 GCTAACAATTCATTCCTTCTAGGATTG 58.651 37.037 10.08 10.08 45.34 2.67
4008 8074 7.814264 ATGCTAACAATTCATTCCTTCTAGG 57.186 36.000 0.00 0.00 36.46 3.02
4214 8340 7.114106 TGTGTATATTGTGTGCAAAATTTGTCG 59.886 33.333 7.60 0.00 38.21 4.35
4301 8427 8.410673 AATTCCTTCCTTCTTAGAAAACTTCC 57.589 34.615 0.00 0.00 0.00 3.46
4471 8616 6.393990 TGCAATTTCAGTGTAAAGTTGTGTT 58.606 32.000 0.00 0.00 0.00 3.32
4572 8730 3.509575 TGTGGTTATTCTTGGGATGTTGC 59.490 43.478 0.00 0.00 0.00 4.17
4881 9079 5.032327 AGTACCATCCCGGATAGAAAAAC 57.968 43.478 0.73 0.00 38.63 2.43
4894 9094 7.201582 CGGATGTACAAAAGTTTAGTACCATCC 60.202 40.741 16.58 16.58 39.59 3.51
4896 9096 7.163441 ACGGATGTACAAAAGTTTAGTACCAT 58.837 34.615 0.00 0.00 37.82 3.55
4991 9199 0.541764 TGGGCAGGAAAACATGGGTC 60.542 55.000 0.00 0.00 0.00 4.46
5070 9775 2.589540 CATGTCTTGGGCGCCCTA 59.410 61.111 43.34 35.88 36.94 3.53
5099 9804 8.816640 ATAAAATGAAACAGAACGCAGAAAAT 57.183 26.923 0.00 0.00 0.00 1.82
5180 9926 9.983804 GAACTTTTTAATAATCTCGGATTTCGT 57.016 29.630 4.76 0.00 40.32 3.85
5181 9927 9.144085 CGAACTTTTTAATAATCTCGGATTTCG 57.856 33.333 4.76 0.00 40.90 3.46
5301 10053 7.872113 TTAAAATTTGAACCAATTTGGCACT 57.128 28.000 15.49 0.13 42.67 4.40
5499 10272 6.852664 ACGAAAATCAGGGTTGCTAATAAAG 58.147 36.000 0.00 0.00 0.00 1.85
5596 10373 3.938653 GCCCCAAGCGTTAAATAGC 57.061 52.632 0.00 0.00 0.00 2.97
5608 10385 1.971505 CTGACTATCTGCCGCCCCAA 61.972 60.000 0.00 0.00 0.00 4.12
5648 10425 2.996153 TAACGGGCCGGCACAGTA 60.996 61.111 31.47 17.29 0.00 2.74
5779 10599 7.922505 TCAAACATTCATAAAAACAGGAACG 57.077 32.000 0.00 0.00 0.00 3.95
5866 10701 6.654793 TTGGAAAACACAAACAGTTATTGC 57.345 33.333 0.00 0.00 0.00 3.56
5870 10706 7.162082 ACCATTTTGGAAAACACAAACAGTTA 58.838 30.769 0.00 0.00 40.96 2.24
6328 11185 3.655276 TGACCTTAAAGACTCGACCAC 57.345 47.619 0.00 0.00 0.00 4.16
6365 11222 7.480810 AGTAATAATTCAGAAAAATGACGGGC 58.519 34.615 0.00 0.00 0.00 6.13
6751 11620 9.646336 CATATAAAAACTGGTGCGATTTAGTAC 57.354 33.333 0.00 0.00 0.00 2.73
6800 11671 5.765182 ACTTCCTTATTCTCACACAACCTTG 59.235 40.000 0.00 0.00 0.00 3.61
7111 11988 4.540824 GTGACGTAACCGGATAGATTACC 58.459 47.826 9.46 0.00 38.78 2.85
7129 12006 1.096416 CCACTCTCTCCTACGGTGAC 58.904 60.000 0.00 0.00 0.00 3.67
8028 12912 6.959639 ATACATTGTTTCTGACCACTTGTT 57.040 33.333 0.00 0.00 0.00 2.83
8190 13075 2.106938 CATTAGAGCTCGGCCGCA 59.893 61.111 23.51 8.85 0.00 5.69
8361 13246 1.918262 TCTCAGCATTTCCCACATCCT 59.082 47.619 0.00 0.00 0.00 3.24
8425 13310 7.383572 AGCTATATGTAACTCGCTTGAGAATTG 59.616 37.037 0.00 0.00 42.66 2.32
8439 13324 8.608844 AATGGAGCACTTTAGCTATATGTAAC 57.391 34.615 0.00 0.00 46.75 2.50
8516 13402 7.031372 GTGATGAGCATTAATTGACAACATGT 58.969 34.615 0.00 0.00 0.00 3.21
8578 13467 0.969149 TTGATGCAGTCCTCGTCACT 59.031 50.000 0.00 0.00 0.00 3.41
8963 13856 1.352083 TAGCTGAGAAGCCCACACTT 58.648 50.000 0.00 0.00 34.90 3.16
9059 13952 5.176958 GGGTATTCGTGGAGTATGAAATTCG 59.823 44.000 0.00 0.00 37.81 3.34
9109 14002 1.153429 GTATTCGCCAAGCCCGTCT 60.153 57.895 0.00 0.00 0.00 4.18
9143 14036 1.315257 GGCACGCCCACTTCATGAAT 61.315 55.000 8.96 0.00 0.00 2.57
9205 14098 2.435586 AGCTACCAGCAAGCGCAG 60.436 61.111 11.47 2.01 45.56 5.18
9227 14123 4.038642 GGTAAACTAGGAGAGCAGGATCAG 59.961 50.000 0.00 0.00 0.00 2.90
9234 14130 1.831736 GGCAGGTAAACTAGGAGAGCA 59.168 52.381 0.00 0.00 0.00 4.26
9255 14151 8.177119 TGTGTTTAGTTTTCTTCCTATGCATT 57.823 30.769 3.54 0.00 0.00 3.56
9335 14231 3.698029 ATCTTGATGGTATGCGTTTGC 57.302 42.857 0.00 0.00 43.20 3.68
9437 14333 4.188462 CGGCAGGATCACAACAGTTATAA 58.812 43.478 0.00 0.00 0.00 0.98
9459 14355 0.878416 TGCATGCTACGTTTCCCAAC 59.122 50.000 20.33 0.00 0.00 3.77
9460 14356 1.610363 TTGCATGCTACGTTTCCCAA 58.390 45.000 20.33 0.00 0.00 4.12
9461 14357 1.832883 ATTGCATGCTACGTTTCCCA 58.167 45.000 20.33 0.00 0.00 4.37
9462 14358 2.939460 AATTGCATGCTACGTTTCCC 57.061 45.000 20.33 0.00 0.00 3.97
9463 14359 3.832276 TGAAATTGCATGCTACGTTTCC 58.168 40.909 20.33 8.84 0.00 3.13
9464 14360 5.820926 TTTGAAATTGCATGCTACGTTTC 57.179 34.783 20.33 20.42 0.00 2.78
9465 14361 6.595772 TTTTTGAAATTGCATGCTACGTTT 57.404 29.167 20.33 13.51 0.00 3.60
9466 14362 6.783892 ATTTTTGAAATTGCATGCTACGTT 57.216 29.167 20.33 9.33 0.00 3.99
9467 14363 6.783892 AATTTTTGAAATTGCATGCTACGT 57.216 29.167 20.33 2.42 0.00 3.57
9468 14364 6.737750 GGAAATTTTTGAAATTGCATGCTACG 59.262 34.615 20.33 0.00 0.00 3.51
9469 14365 7.809665 AGGAAATTTTTGAAATTGCATGCTAC 58.190 30.769 20.33 6.26 0.00 3.58
9470 14366 7.982761 AGGAAATTTTTGAAATTGCATGCTA 57.017 28.000 20.33 12.49 0.00 3.49
9471 14367 6.887626 AGGAAATTTTTGAAATTGCATGCT 57.112 29.167 20.33 0.00 0.00 3.79
9472 14368 7.534918 GTGTAGGAAATTTTTGAAATTGCATGC 59.465 33.333 11.82 11.82 0.00 4.06
9473 14369 8.776470 AGTGTAGGAAATTTTTGAAATTGCATG 58.224 29.630 6.48 0.00 0.00 4.06
9474 14370 8.907222 AGTGTAGGAAATTTTTGAAATTGCAT 57.093 26.923 6.48 2.43 0.00 3.96
9475 14371 7.984050 TGAGTGTAGGAAATTTTTGAAATTGCA 59.016 29.630 6.48 0.00 0.00 4.08
9476 14372 8.275632 GTGAGTGTAGGAAATTTTTGAAATTGC 58.724 33.333 0.00 0.00 0.00 3.56
9477 14373 8.479280 CGTGAGTGTAGGAAATTTTTGAAATTG 58.521 33.333 0.00 0.00 0.00 2.32
9478 14374 7.169140 GCGTGAGTGTAGGAAATTTTTGAAATT 59.831 33.333 0.00 0.00 0.00 1.82
9479 14375 6.640907 GCGTGAGTGTAGGAAATTTTTGAAAT 59.359 34.615 0.00 0.00 0.00 2.17
9480 14376 5.974751 GCGTGAGTGTAGGAAATTTTTGAAA 59.025 36.000 0.00 0.00 0.00 2.69
9481 14377 5.066634 TGCGTGAGTGTAGGAAATTTTTGAA 59.933 36.000 0.00 0.00 0.00 2.69
9482 14378 4.576873 TGCGTGAGTGTAGGAAATTTTTGA 59.423 37.500 0.00 0.00 0.00 2.69
9483 14379 4.854399 TGCGTGAGTGTAGGAAATTTTTG 58.146 39.130 0.00 0.00 0.00 2.44
9484 14380 5.298276 TCTTGCGTGAGTGTAGGAAATTTTT 59.702 36.000 0.00 0.00 0.00 1.94
9485 14381 4.819630 TCTTGCGTGAGTGTAGGAAATTTT 59.180 37.500 0.00 0.00 0.00 1.82
9486 14382 4.385825 TCTTGCGTGAGTGTAGGAAATTT 58.614 39.130 0.00 0.00 0.00 1.82
9487 14383 4.002906 TCTTGCGTGAGTGTAGGAAATT 57.997 40.909 0.00 0.00 0.00 1.82
9488 14384 3.678056 TCTTGCGTGAGTGTAGGAAAT 57.322 42.857 0.00 0.00 0.00 2.17
9489 14385 3.258372 AGATCTTGCGTGAGTGTAGGAAA 59.742 43.478 0.00 0.00 0.00 3.13
9490 14386 2.826128 AGATCTTGCGTGAGTGTAGGAA 59.174 45.455 0.00 0.00 0.00 3.36
9491 14387 2.447443 AGATCTTGCGTGAGTGTAGGA 58.553 47.619 0.00 0.00 0.00 2.94
9492 14388 2.949451 AGATCTTGCGTGAGTGTAGG 57.051 50.000 0.00 0.00 0.00 3.18
9493 14389 5.431420 AGATAGATCTTGCGTGAGTGTAG 57.569 43.478 0.00 0.00 31.97 2.74
9494 14390 5.470437 CCTAGATAGATCTTGCGTGAGTGTA 59.530 44.000 0.00 0.00 38.32 2.90
9495 14391 4.277174 CCTAGATAGATCTTGCGTGAGTGT 59.723 45.833 0.00 0.00 38.32 3.55
9496 14392 4.517075 TCCTAGATAGATCTTGCGTGAGTG 59.483 45.833 0.00 0.00 38.32 3.51
9497 14393 4.720046 TCCTAGATAGATCTTGCGTGAGT 58.280 43.478 0.00 0.00 38.32 3.41
9498 14394 5.000591 TCTCCTAGATAGATCTTGCGTGAG 58.999 45.833 0.00 1.23 38.32 3.51
9499 14395 4.974399 TCTCCTAGATAGATCTTGCGTGA 58.026 43.478 0.00 0.00 38.32 4.35
9500 14396 5.639757 CATCTCCTAGATAGATCTTGCGTG 58.360 45.833 0.00 0.00 38.32 5.34
9501 14397 4.157656 GCATCTCCTAGATAGATCTTGCGT 59.842 45.833 0.00 0.00 38.32 5.24
9502 14398 4.157472 TGCATCTCCTAGATAGATCTTGCG 59.843 45.833 0.00 0.00 36.48 4.85
9503 14399 5.657826 TGCATCTCCTAGATAGATCTTGC 57.342 43.478 0.00 0.69 38.32 4.01
9504 14400 7.068470 TGCTATGCATCTCCTAGATAGATCTTG 59.932 40.741 0.19 0.00 32.12 3.02
9505 14401 7.124721 TGCTATGCATCTCCTAGATAGATCTT 58.875 38.462 0.19 0.00 32.12 2.40
9506 14402 6.671605 TGCTATGCATCTCCTAGATAGATCT 58.328 40.000 0.19 0.00 32.12 2.75
9507 14403 6.957920 TGCTATGCATCTCCTAGATAGATC 57.042 41.667 0.19 0.00 32.12 2.75
9508 14404 6.183360 CGTTGCTATGCATCTCCTAGATAGAT 60.183 42.308 0.19 0.00 38.76 1.98
9509 14405 5.124617 CGTTGCTATGCATCTCCTAGATAGA 59.875 44.000 0.19 0.00 38.76 1.98
9510 14406 5.124617 TCGTTGCTATGCATCTCCTAGATAG 59.875 44.000 0.19 0.00 38.76 2.08
9511 14407 5.010282 TCGTTGCTATGCATCTCCTAGATA 58.990 41.667 0.19 0.00 38.76 1.98
9512 14408 3.829026 TCGTTGCTATGCATCTCCTAGAT 59.171 43.478 0.19 0.00 38.76 1.98
9513 14409 3.222603 TCGTTGCTATGCATCTCCTAGA 58.777 45.455 0.19 0.00 38.76 2.43
9514 14410 3.254411 TCTCGTTGCTATGCATCTCCTAG 59.746 47.826 0.19 0.00 38.76 3.02
9515 14411 3.222603 TCTCGTTGCTATGCATCTCCTA 58.777 45.455 0.19 0.00 38.76 2.94
9516 14412 2.034878 TCTCGTTGCTATGCATCTCCT 58.965 47.619 0.19 0.00 38.76 3.69
9517 14413 2.402305 CTCTCGTTGCTATGCATCTCC 58.598 52.381 0.19 0.00 38.76 3.71
9518 14414 2.402305 CCTCTCGTTGCTATGCATCTC 58.598 52.381 0.19 0.00 38.76 2.75
9519 14415 1.069823 CCCTCTCGTTGCTATGCATCT 59.930 52.381 0.19 0.00 38.76 2.90
9520 14416 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
9521 14417 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
9522 14418 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
9523 14419 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
9524 14420 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
9525 14421 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
9526 14422 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
9527 14423 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
9528 14424 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
9529 14425 0.244994 CACACTCTCCCCTCTCGTTG 59.755 60.000 0.00 0.00 0.00 4.10
9530 14426 0.178958 ACACACTCTCCCCTCTCGTT 60.179 55.000 0.00 0.00 0.00 3.85
9531 14427 0.609681 GACACACTCTCCCCTCTCGT 60.610 60.000 0.00 0.00 0.00 4.18
9532 14428 0.322997 AGACACACTCTCCCCTCTCG 60.323 60.000 0.00 0.00 0.00 4.04
9533 14429 2.371306 GTAGACACACTCTCCCCTCTC 58.629 57.143 0.00 0.00 0.00 3.20
9534 14430 1.340211 CGTAGACACACTCTCCCCTCT 60.340 57.143 0.00 0.00 0.00 3.69
9535 14431 1.096416 CGTAGACACACTCTCCCCTC 58.904 60.000 0.00 0.00 0.00 4.30
9536 14432 0.404812 ACGTAGACACACTCTCCCCT 59.595 55.000 0.00 0.00 0.00 4.79
9537 14433 1.742268 GTACGTAGACACACTCTCCCC 59.258 57.143 0.00 0.00 0.00 4.81
9538 14434 1.742268 GGTACGTAGACACACTCTCCC 59.258 57.143 0.00 0.00 0.00 4.30
9539 14435 1.742268 GGGTACGTAGACACACTCTCC 59.258 57.143 0.00 0.00 0.00 3.71
9540 14436 2.677337 GAGGGTACGTAGACACACTCTC 59.323 54.545 10.55 4.79 41.06 3.20
9541 14437 2.709213 GAGGGTACGTAGACACACTCT 58.291 52.381 10.55 0.00 41.06 3.24
9542 14438 1.396301 CGAGGGTACGTAGACACACTC 59.604 57.143 8.17 8.17 40.93 3.51
9543 14439 1.271054 ACGAGGGTACGTAGACACACT 60.271 52.381 0.00 0.00 44.72 3.55
9544 14440 1.160137 ACGAGGGTACGTAGACACAC 58.840 55.000 0.00 0.00 44.72 3.82
9545 14441 2.760634 TACGAGGGTACGTAGACACA 57.239 50.000 0.00 0.00 44.72 3.72
9562 14458 2.257034 CGCTTCCACTTAACGGTCTAC 58.743 52.381 0.00 0.00 0.00 2.59
9563 14459 1.888512 ACGCTTCCACTTAACGGTCTA 59.111 47.619 0.00 0.00 0.00 2.59
9564 14460 0.677842 ACGCTTCCACTTAACGGTCT 59.322 50.000 0.00 0.00 0.00 3.85
9565 14461 1.505425 AACGCTTCCACTTAACGGTC 58.495 50.000 0.00 0.00 0.00 4.79
9566 14462 1.957668 AAACGCTTCCACTTAACGGT 58.042 45.000 0.00 0.00 0.00 4.83
9567 14463 3.680937 TGATAAACGCTTCCACTTAACGG 59.319 43.478 0.00 0.00 0.00 4.44
9568 14464 4.634991 GTGATAAACGCTTCCACTTAACG 58.365 43.478 0.00 0.00 0.00 3.18
9569 14465 4.634991 CGTGATAAACGCTTCCACTTAAC 58.365 43.478 0.00 0.00 46.99 2.01
9570 14466 4.914312 CGTGATAAACGCTTCCACTTAA 57.086 40.909 0.00 0.00 46.99 1.85
9582 14478 3.615496 ACTACATCAACCGCGTGATAAAC 59.385 43.478 11.38 0.00 36.04 2.01
9583 14479 3.852286 ACTACATCAACCGCGTGATAAA 58.148 40.909 11.38 3.25 36.04 1.40
9584 14480 3.441163 GACTACATCAACCGCGTGATAA 58.559 45.455 11.38 3.56 36.04 1.75
9585 14481 2.540157 CGACTACATCAACCGCGTGATA 60.540 50.000 11.38 0.00 36.04 2.15
9586 14482 1.797713 CGACTACATCAACCGCGTGAT 60.798 52.381 4.92 5.79 38.84 3.06
9587 14483 0.455464 CGACTACATCAACCGCGTGA 60.455 55.000 4.92 3.05 0.00 4.35
9588 14484 0.731514 ACGACTACATCAACCGCGTG 60.732 55.000 4.92 0.00 0.00 5.34
9589 14485 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
9590 14486 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
9591 14487 2.097142 AGAGTACGACTACATCAACCGC 59.903 50.000 0.00 0.00 0.00 5.68
9592 14488 4.341099 GAAGAGTACGACTACATCAACCG 58.659 47.826 0.00 0.00 0.00 4.44
9593 14489 4.341099 CGAAGAGTACGACTACATCAACC 58.659 47.826 0.00 0.00 0.00 3.77
9594 14490 3.784994 GCGAAGAGTACGACTACATCAAC 59.215 47.826 0.00 0.00 0.00 3.18
9595 14491 3.484721 CGCGAAGAGTACGACTACATCAA 60.485 47.826 0.00 0.00 0.00 2.57
9596 14492 2.030091 CGCGAAGAGTACGACTACATCA 59.970 50.000 0.00 0.00 0.00 3.07
9597 14493 2.283617 TCGCGAAGAGTACGACTACATC 59.716 50.000 6.20 0.00 0.00 3.06
9598 14494 2.274437 TCGCGAAGAGTACGACTACAT 58.726 47.619 6.20 0.00 0.00 2.29
9599 14495 1.713597 TCGCGAAGAGTACGACTACA 58.286 50.000 6.20 0.00 0.00 2.74
9600 14496 2.348404 GGATCGCGAAGAGTACGACTAC 60.348 54.545 15.24 0.00 38.85 2.73
9601 14497 1.863454 GGATCGCGAAGAGTACGACTA 59.137 52.381 15.24 0.00 38.85 2.59
9602 14498 0.656785 GGATCGCGAAGAGTACGACT 59.343 55.000 15.24 0.00 38.85 4.18
9603 14499 0.653897 CGGATCGCGAAGAGTACGAC 60.654 60.000 15.24 0.00 38.85 4.34
9604 14500 0.807275 TCGGATCGCGAAGAGTACGA 60.807 55.000 15.24 12.48 40.53 3.43
9605 14501 0.235144 ATCGGATCGCGAAGAGTACG 59.765 55.000 15.24 9.75 0.00 3.67
9606 14502 1.263484 TGATCGGATCGCGAAGAGTAC 59.737 52.381 15.24 4.78 0.00 2.73
9607 14503 1.589803 TGATCGGATCGCGAAGAGTA 58.410 50.000 15.24 3.88 0.00 2.59
9608 14504 0.955178 ATGATCGGATCGCGAAGAGT 59.045 50.000 15.24 0.00 0.00 3.24
9609 14505 1.068954 TCATGATCGGATCGCGAAGAG 60.069 52.381 15.24 7.37 0.00 2.85
9610 14506 0.951558 TCATGATCGGATCGCGAAGA 59.048 50.000 15.24 13.98 0.00 2.87
9611 14507 1.916651 GATCATGATCGGATCGCGAAG 59.083 52.381 19.55 8.20 32.62 3.79
9612 14508 1.402852 GGATCATGATCGGATCGCGAA 60.403 52.381 25.60 0.00 41.62 4.70
9613 14509 0.171231 GGATCATGATCGGATCGCGA 59.829 55.000 25.60 13.09 41.62 5.87
9614 14510 0.109132 TGGATCATGATCGGATCGCG 60.109 55.000 25.60 0.00 41.62 5.87
9615 14511 1.728971 GTTGGATCATGATCGGATCGC 59.271 52.381 25.60 13.45 41.62 4.58
9616 14512 2.341257 GGTTGGATCATGATCGGATCG 58.659 52.381 25.60 0.44 41.62 3.69
9617 14513 2.029020 TCGGTTGGATCATGATCGGATC 60.029 50.000 25.60 16.82 40.31 3.36
9618 14514 1.970640 TCGGTTGGATCATGATCGGAT 59.029 47.619 25.60 0.00 38.69 4.18
9619 14515 1.408969 TCGGTTGGATCATGATCGGA 58.591 50.000 25.60 15.56 38.69 4.55
9620 14516 2.462456 ATCGGTTGGATCATGATCGG 57.538 50.000 25.60 13.92 38.69 4.18
9629 14525 0.389391 CGGCACTAGATCGGTTGGAT 59.611 55.000 0.00 0.00 38.35 3.41
9630 14526 1.672854 CCGGCACTAGATCGGTTGGA 61.673 60.000 0.00 0.00 39.04 3.53
9631 14527 1.227263 CCGGCACTAGATCGGTTGG 60.227 63.158 0.00 0.00 39.04 3.77
9632 14528 0.527817 GTCCGGCACTAGATCGGTTG 60.528 60.000 17.46 0.00 43.75 3.77
9633 14529 1.814527 GTCCGGCACTAGATCGGTT 59.185 57.895 17.46 0.00 43.75 4.44
9634 14530 2.478890 CGTCCGGCACTAGATCGGT 61.479 63.158 17.46 0.00 43.75 4.69
9635 14531 2.331805 CGTCCGGCACTAGATCGG 59.668 66.667 13.88 13.88 44.59 4.18
9636 14532 2.184830 TCCGTCCGGCACTAGATCG 61.185 63.158 0.00 0.00 34.68 3.69
9637 14533 1.359475 GTCCGTCCGGCACTAGATC 59.641 63.158 0.00 0.00 34.68 2.75
9638 14534 2.478890 CGTCCGTCCGGCACTAGAT 61.479 63.158 0.00 0.00 34.68 1.98
9639 14535 3.129502 CGTCCGTCCGGCACTAGA 61.130 66.667 0.00 0.00 34.68 2.43
9640 14536 4.189188 CCGTCCGTCCGGCACTAG 62.189 72.222 0.00 0.00 41.78 2.57
9656 14552 0.733150 GTGCTAAATTCGGAGGTGCC 59.267 55.000 0.00 0.00 0.00 5.01
9657 14553 1.130561 GTGTGCTAAATTCGGAGGTGC 59.869 52.381 0.00 0.00 0.00 5.01
9658 14554 1.393539 CGTGTGCTAAATTCGGAGGTG 59.606 52.381 0.00 0.00 0.00 4.00
9659 14555 1.001633 ACGTGTGCTAAATTCGGAGGT 59.998 47.619 0.00 0.00 0.00 3.85
9660 14556 1.393539 CACGTGTGCTAAATTCGGAGG 59.606 52.381 7.58 0.00 0.00 4.30
9661 14557 2.787723 CACGTGTGCTAAATTCGGAG 57.212 50.000 7.58 0.00 0.00 4.63
9673 14569 0.642291 GTCATCGAGATGCACGTGTG 59.358 55.000 18.38 4.76 38.65 3.82
9674 14570 0.798389 CGTCATCGAGATGCACGTGT 60.798 55.000 18.38 0.00 37.46 4.49
9675 14571 0.798389 ACGTCATCGAGATGCACGTG 60.798 55.000 26.42 12.28 44.92 4.49
9676 14572 0.523546 GACGTCATCGAGATGCACGT 60.524 55.000 26.88 26.88 46.90 4.49
9677 14573 0.248255 AGACGTCATCGAGATGCACG 60.248 55.000 19.50 23.13 42.40 5.34
9678 14574 1.471964 GAGACGTCATCGAGATGCAC 58.528 55.000 19.50 6.84 38.65 4.57
9679 14575 0.382158 GGAGACGTCATCGAGATGCA 59.618 55.000 19.50 0.00 38.65 3.96
9680 14576 0.665835 AGGAGACGTCATCGAGATGC 59.334 55.000 19.50 0.00 38.65 3.91
9681 14577 1.265635 GGAGGAGACGTCATCGAGATG 59.734 57.143 19.50 6.74 40.62 2.90
9682 14578 1.142060 AGGAGGAGACGTCATCGAGAT 59.858 52.381 19.50 0.00 40.62 2.75
9683 14579 0.542333 AGGAGGAGACGTCATCGAGA 59.458 55.000 19.50 0.00 40.62 4.04
9684 14580 1.332375 GAAGGAGGAGACGTCATCGAG 59.668 57.143 19.50 0.00 40.62 4.04
9685 14581 1.065345 AGAAGGAGGAGACGTCATCGA 60.065 52.381 19.50 0.00 40.62 3.59
9686 14582 1.384525 AGAAGGAGGAGACGTCATCG 58.615 55.000 19.50 0.00 43.34 3.84
9687 14583 2.755655 TCAAGAAGGAGGAGACGTCATC 59.244 50.000 19.50 12.22 32.43 2.92
9688 14584 2.808919 TCAAGAAGGAGGAGACGTCAT 58.191 47.619 19.50 2.61 0.00 3.06
9689 14585 2.287977 TCAAGAAGGAGGAGACGTCA 57.712 50.000 19.50 0.00 0.00 4.35
9690 14586 2.100087 GGATCAAGAAGGAGGAGACGTC 59.900 54.545 7.70 7.70 0.00 4.34
9691 14587 2.104170 GGATCAAGAAGGAGGAGACGT 58.896 52.381 0.00 0.00 0.00 4.34
9692 14588 2.100584 CTGGATCAAGAAGGAGGAGACG 59.899 54.545 0.00 0.00 0.00 4.18
9693 14589 2.158971 GCTGGATCAAGAAGGAGGAGAC 60.159 54.545 0.00 0.00 0.00 3.36
9694 14590 2.114616 GCTGGATCAAGAAGGAGGAGA 58.885 52.381 0.00 0.00 0.00 3.71
9695 14591 1.836166 TGCTGGATCAAGAAGGAGGAG 59.164 52.381 0.00 0.00 0.00 3.69
9696 14592 1.956869 TGCTGGATCAAGAAGGAGGA 58.043 50.000 0.00 0.00 0.00 3.71
9697 14593 2.641305 CTTGCTGGATCAAGAAGGAGG 58.359 52.381 0.00 0.00 44.61 4.30
9698 14594 2.015587 GCTTGCTGGATCAAGAAGGAG 58.984 52.381 0.00 0.00 44.61 3.69
9699 14595 1.352017 TGCTTGCTGGATCAAGAAGGA 59.648 47.619 0.00 0.63 44.61 3.36
9700 14596 1.743958 CTGCTTGCTGGATCAAGAAGG 59.256 52.381 0.00 0.00 43.11 3.46
9701 14597 1.743958 CCTGCTTGCTGGATCAAGAAG 59.256 52.381 12.31 6.17 45.30 2.85
9702 14598 1.352017 TCCTGCTTGCTGGATCAAGAA 59.648 47.619 15.62 0.00 44.61 2.52
9703 14599 0.986527 TCCTGCTTGCTGGATCAAGA 59.013 50.000 15.62 0.00 44.61 3.02
9704 14600 1.065636 TCTCCTGCTTGCTGGATCAAG 60.066 52.381 18.95 9.58 44.63 3.02
9705 14601 0.986527 TCTCCTGCTTGCTGGATCAA 59.013 50.000 18.95 7.67 0.00 2.57
9706 14602 0.540454 CTCTCCTGCTTGCTGGATCA 59.460 55.000 18.95 9.84 0.00 2.92
9707 14603 0.179051 CCTCTCCTGCTTGCTGGATC 60.179 60.000 18.95 0.00 0.00 3.36
9708 14604 0.619832 TCCTCTCCTGCTTGCTGGAT 60.620 55.000 18.95 0.00 0.00 3.41
9709 14605 1.229304 TCCTCTCCTGCTTGCTGGA 60.229 57.895 17.91 17.91 0.00 3.86
9710 14606 1.221293 CTCCTCTCCTGCTTGCTGG 59.779 63.158 11.57 11.57 0.00 4.85
9711 14607 0.612229 TTCTCCTCTCCTGCTTGCTG 59.388 55.000 0.00 0.00 0.00 4.41
9712 14608 0.903942 CTTCTCCTCTCCTGCTTGCT 59.096 55.000 0.00 0.00 0.00 3.91
9713 14609 0.612744 ACTTCTCCTCTCCTGCTTGC 59.387 55.000 0.00 0.00 0.00 4.01
9714 14610 3.360867 TCTACTTCTCCTCTCCTGCTTG 58.639 50.000 0.00 0.00 0.00 4.01
9715 14611 3.748645 TCTACTTCTCCTCTCCTGCTT 57.251 47.619 0.00 0.00 0.00 3.91
9716 14612 3.565307 CATCTACTTCTCCTCTCCTGCT 58.435 50.000 0.00 0.00 0.00 4.24
9717 14613 2.627699 CCATCTACTTCTCCTCTCCTGC 59.372 54.545 0.00 0.00 0.00 4.85
9718 14614 3.117322 TCCCATCTACTTCTCCTCTCCTG 60.117 52.174 0.00 0.00 0.00 3.86
9719 14615 3.135279 TCCCATCTACTTCTCCTCTCCT 58.865 50.000 0.00 0.00 0.00 3.69
9720 14616 3.603965 TCCCATCTACTTCTCCTCTCC 57.396 52.381 0.00 0.00 0.00 3.71
9721 14617 4.522789 GTGATCCCATCTACTTCTCCTCTC 59.477 50.000 0.00 0.00 0.00 3.20
9722 14618 4.078922 TGTGATCCCATCTACTTCTCCTCT 60.079 45.833 0.00 0.00 0.00 3.69
9723 14619 4.219115 TGTGATCCCATCTACTTCTCCTC 58.781 47.826 0.00 0.00 0.00 3.71
9724 14620 4.271807 TGTGATCCCATCTACTTCTCCT 57.728 45.455 0.00 0.00 0.00 3.69
9725 14621 4.443598 GGTTGTGATCCCATCTACTTCTCC 60.444 50.000 0.00 0.00 0.00 3.71
9726 14622 4.162320 TGGTTGTGATCCCATCTACTTCTC 59.838 45.833 0.00 0.00 0.00 2.87
9727 14623 4.104086 TGGTTGTGATCCCATCTACTTCT 58.896 43.478 0.00 0.00 0.00 2.85
9728 14624 4.487714 TGGTTGTGATCCCATCTACTTC 57.512 45.455 0.00 0.00 0.00 3.01
9729 14625 4.042809 TGTTGGTTGTGATCCCATCTACTT 59.957 41.667 0.00 0.00 0.00 2.24
9730 14626 3.587061 TGTTGGTTGTGATCCCATCTACT 59.413 43.478 0.00 0.00 0.00 2.57
9731 14627 3.689649 GTGTTGGTTGTGATCCCATCTAC 59.310 47.826 0.00 0.00 0.00 2.59
9732 14628 3.618752 CGTGTTGGTTGTGATCCCATCTA 60.619 47.826 0.00 0.00 0.00 1.98
9733 14629 2.795329 GTGTTGGTTGTGATCCCATCT 58.205 47.619 0.00 0.00 0.00 2.90
9734 14630 1.468520 CGTGTTGGTTGTGATCCCATC 59.531 52.381 0.00 0.00 0.00 3.51
9735 14631 1.073125 TCGTGTTGGTTGTGATCCCAT 59.927 47.619 0.00 0.00 0.00 4.00
9736 14632 0.470341 TCGTGTTGGTTGTGATCCCA 59.530 50.000 0.00 0.00 0.00 4.37
9737 14633 1.468520 CATCGTGTTGGTTGTGATCCC 59.531 52.381 0.00 0.00 0.00 3.85
9738 14634 1.468520 CCATCGTGTTGGTTGTGATCC 59.531 52.381 0.00 0.00 31.74 3.36
9739 14635 1.135689 GCCATCGTGTTGGTTGTGATC 60.136 52.381 0.00 0.00 39.11 2.92
9740 14636 0.881118 GCCATCGTGTTGGTTGTGAT 59.119 50.000 0.00 0.00 39.11 3.06
9741 14637 0.464554 TGCCATCGTGTTGGTTGTGA 60.465 50.000 0.00 0.00 39.11 3.58
9742 14638 0.597568 ATGCCATCGTGTTGGTTGTG 59.402 50.000 0.00 0.00 39.11 3.33
9743 14639 0.597568 CATGCCATCGTGTTGGTTGT 59.402 50.000 0.00 0.00 39.11 3.32
9744 14640 0.109179 CCATGCCATCGTGTTGGTTG 60.109 55.000 0.00 0.00 39.11 3.77
9745 14641 0.539438 ACCATGCCATCGTGTTGGTT 60.539 50.000 0.00 0.00 37.40 3.67
9746 14642 1.074775 ACCATGCCATCGTGTTGGT 59.925 52.632 0.00 0.00 39.11 3.67
9747 14643 1.507630 CACCATGCCATCGTGTTGG 59.492 57.895 0.00 0.00 39.94 3.77
9748 14644 1.243342 ACCACCATGCCATCGTGTTG 61.243 55.000 1.78 0.00 0.00 3.33
9749 14645 1.074775 ACCACCATGCCATCGTGTT 59.925 52.632 1.78 0.00 0.00 3.32
9750 14646 1.675310 CACCACCATGCCATCGTGT 60.675 57.895 1.78 0.00 0.00 4.49
9751 14647 0.749091 ATCACCACCATGCCATCGTG 60.749 55.000 0.00 0.00 0.00 4.35
9752 14648 0.749091 CATCACCACCATGCCATCGT 60.749 55.000 0.00 0.00 0.00 3.73
9753 14649 1.449726 CCATCACCACCATGCCATCG 61.450 60.000 0.00 0.00 0.00 3.84
9754 14650 0.396139 ACCATCACCACCATGCCATC 60.396 55.000 0.00 0.00 0.00 3.51
9755 14651 0.685131 CACCATCACCACCATGCCAT 60.685 55.000 0.00 0.00 0.00 4.40
9756 14652 1.304299 CACCATCACCACCATGCCA 60.304 57.895 0.00 0.00 0.00 4.92
9757 14653 2.053865 CCACCATCACCACCATGCC 61.054 63.158 0.00 0.00 0.00 4.40
9758 14654 1.304381 ACCACCATCACCACCATGC 60.304 57.895 0.00 0.00 0.00 4.06
9759 14655 0.966875 CCACCACCATCACCACCATG 60.967 60.000 0.00 0.00 0.00 3.66
9760 14656 1.383799 CCACCACCATCACCACCAT 59.616 57.895 0.00 0.00 0.00 3.55
9761 14657 2.081787 ACCACCACCATCACCACCA 61.082 57.895 0.00 0.00 0.00 4.17
9762 14658 1.603455 CACCACCACCATCACCACC 60.603 63.158 0.00 0.00 0.00 4.61
9763 14659 1.603455 CCACCACCACCATCACCAC 60.603 63.158 0.00 0.00 0.00 4.16
9764 14660 1.356494 TTCCACCACCACCATCACCA 61.356 55.000 0.00 0.00 0.00 4.17
9765 14661 0.893727 GTTCCACCACCACCATCACC 60.894 60.000 0.00 0.00 0.00 4.02
9766 14662 0.179004 TGTTCCACCACCACCATCAC 60.179 55.000 0.00 0.00 0.00 3.06
9767 14663 0.179004 GTGTTCCACCACCACCATCA 60.179 55.000 0.00 0.00 0.00 3.07
9768 14664 2.641197 GTGTTCCACCACCACCATC 58.359 57.895 0.00 0.00 0.00 3.51
9769 14665 4.920828 GTGTTCCACCACCACCAT 57.079 55.556 0.00 0.00 0.00 3.55
9778 14674 1.885850 AGCGTTGTCGGTGTTCCAC 60.886 57.895 0.00 0.00 46.08 4.02
9779 14675 2.502093 AGCGTTGTCGGTGTTCCA 59.498 55.556 0.00 0.00 46.08 3.53
9795 14691 2.589492 CCGGCGATGCTTAGCGAAG 61.589 63.158 9.30 1.67 35.60 3.79
9796 14692 2.584970 CCGGCGATGCTTAGCGAA 60.585 61.111 9.30 0.00 0.00 4.70
9797 14693 4.585526 CCCGGCGATGCTTAGCGA 62.586 66.667 9.30 0.00 0.00 4.93
9798 14694 4.585526 TCCCGGCGATGCTTAGCG 62.586 66.667 9.30 0.00 0.00 4.26
9799 14695 2.967615 GTCCCGGCGATGCTTAGC 60.968 66.667 9.30 0.00 0.00 3.09
9800 14696 2.658593 CGTCCCGGCGATGCTTAG 60.659 66.667 9.30 0.00 0.00 2.18
9801 14697 3.133767 CTCGTCCCGGCGATGCTTA 62.134 63.158 9.30 0.00 40.29 3.09
9802 14698 4.514577 CTCGTCCCGGCGATGCTT 62.515 66.667 9.30 0.00 40.29 3.91
9812 14708 4.754667 GTTCCACCGCCTCGTCCC 62.755 72.222 0.00 0.00 0.00 4.46
9813 14709 1.673808 ATAGTTCCACCGCCTCGTCC 61.674 60.000 0.00 0.00 0.00 4.79
9814 14710 0.527817 CATAGTTCCACCGCCTCGTC 60.528 60.000 0.00 0.00 0.00 4.20
9815 14711 1.515954 CATAGTTCCACCGCCTCGT 59.484 57.895 0.00 0.00 0.00 4.18
9816 14712 1.227263 CCATAGTTCCACCGCCTCG 60.227 63.158 0.00 0.00 0.00 4.63
9817 14713 0.105039 CTCCATAGTTCCACCGCCTC 59.895 60.000 0.00 0.00 0.00 4.70
9818 14714 0.617820 ACTCCATAGTTCCACCGCCT 60.618 55.000 0.00 0.00 29.00 5.52
9819 14715 1.117150 TACTCCATAGTTCCACCGCC 58.883 55.000 0.00 0.00 37.15 6.13
9820 14716 2.973694 TTACTCCATAGTTCCACCGC 57.026 50.000 0.00 0.00 37.15 5.68
9821 14717 3.494398 CCCATTACTCCATAGTTCCACCG 60.494 52.174 0.00 0.00 37.15 4.94
9822 14718 3.714798 TCCCATTACTCCATAGTTCCACC 59.285 47.826 0.00 0.00 37.15 4.61
9823 14719 4.654262 TCTCCCATTACTCCATAGTTCCAC 59.346 45.833 0.00 0.00 37.15 4.02
9824 14720 4.890988 TCTCCCATTACTCCATAGTTCCA 58.109 43.478 0.00 0.00 37.15 3.53
9825 14721 5.148502 TCTCTCCCATTACTCCATAGTTCC 58.851 45.833 0.00 0.00 37.15 3.62
9826 14722 6.071984 TCTCTCTCCCATTACTCCATAGTTC 58.928 44.000 0.00 0.00 37.15 3.01
9827 14723 6.031964 TCTCTCTCCCATTACTCCATAGTT 57.968 41.667 0.00 0.00 37.15 2.24
9828 14724 5.458948 CCTCTCTCTCCCATTACTCCATAGT 60.459 48.000 0.00 0.00 39.91 2.12
9829 14725 5.016173 CCTCTCTCTCCCATTACTCCATAG 58.984 50.000 0.00 0.00 0.00 2.23
9830 14726 4.202727 CCCTCTCTCTCCCATTACTCCATA 60.203 50.000 0.00 0.00 0.00 2.74
9831 14727 3.439260 CCCTCTCTCTCCCATTACTCCAT 60.439 52.174 0.00 0.00 0.00 3.41
9832 14728 2.091055 CCCTCTCTCTCCCATTACTCCA 60.091 54.545 0.00 0.00 0.00 3.86
9833 14729 2.604139 CCCTCTCTCTCCCATTACTCC 58.396 57.143 0.00 0.00 0.00 3.85
9834 14730 2.604139 CCCCTCTCTCTCCCATTACTC 58.396 57.143 0.00 0.00 0.00 2.59
9835 14731 1.413808 GCCCCTCTCTCTCCCATTACT 60.414 57.143 0.00 0.00 0.00 2.24
9836 14732 1.052617 GCCCCTCTCTCTCCCATTAC 58.947 60.000 0.00 0.00 0.00 1.89
9837 14733 0.470080 CGCCCCTCTCTCTCCCATTA 60.470 60.000 0.00 0.00 0.00 1.90
9838 14734 1.764054 CGCCCCTCTCTCTCCCATT 60.764 63.158 0.00 0.00 0.00 3.16
9839 14735 2.123077 CGCCCCTCTCTCTCCCAT 60.123 66.667 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.