Multiple sequence alignment - TraesCS1D01G336400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G336400 chr1D 100.000 3376 0 0 3071 6446 426596984 426600359 0.000000e+00 6235.0
1 TraesCS1D01G336400 chr1D 100.000 2126 0 0 662 2787 426594575 426596700 0.000000e+00 3927.0
2 TraesCS1D01G336400 chr1D 100.000 366 0 0 1 366 426593914 426594279 0.000000e+00 676.0
3 TraesCS1D01G336400 chr1B 94.111 2615 116 23 3376 5963 576217188 576219791 0.000000e+00 3941.0
4 TraesCS1D01G336400 chr1B 90.692 1719 91 25 663 2333 576214365 576216062 0.000000e+00 2224.0
5 TraesCS1D01G336400 chr1B 93.284 402 27 0 2386 2787 576216069 576216470 1.550000e-165 593.0
6 TraesCS1D01G336400 chr1B 89.330 403 39 3 3655 4054 576221362 576221763 2.680000e-138 503.0
7 TraesCS1D01G336400 chr1B 86.279 481 41 13 1202 1666 290847077 290847548 3.470000e-137 499.0
8 TraesCS1D01G336400 chr1B 91.798 317 25 1 3073 3389 576216722 576217037 2.130000e-119 440.0
9 TraesCS1D01G336400 chr1B 88.288 222 3 6 153 366 576213960 576214166 1.800000e-60 244.0
10 TraesCS1D01G336400 chr1B 78.846 312 24 21 5542 5829 576222809 576223102 8.590000e-39 172.0
11 TraesCS1D01G336400 chr1B 84.821 112 8 2 4058 4168 576221812 576221915 3.180000e-18 104.0
12 TraesCS1D01G336400 chr1A 94.510 2386 88 23 3600 5963 521642479 521644843 0.000000e+00 3640.0
13 TraesCS1D01G336400 chr1A 89.856 1252 79 15 746 1968 521639366 521640598 0.000000e+00 1565.0
14 TraesCS1D01G336400 chr1A 90.291 824 41 18 1969 2787 521641009 521641798 0.000000e+00 1042.0
15 TraesCS1D01G336400 chr1A 93.928 527 31 1 3071 3596 521641866 521642392 0.000000e+00 795.0
16 TraesCS1D01G336400 chr1A 87.438 406 42 7 3655 4054 521672352 521672754 5.890000e-125 459.0
17 TraesCS1D01G336400 chr1A 90.517 116 6 5 86 199 521638878 521638990 1.450000e-31 148.0
18 TraesCS1D01G336400 chr1A 96.667 60 2 0 307 366 521639048 521639107 4.110000e-17 100.0
19 TraesCS1D01G336400 chr1A 97.297 37 1 0 21 57 521638831 521638867 5.400000e-06 63.9
20 TraesCS1D01G336400 chr5B 87.013 770 65 20 995 1747 85623389 85622638 0.000000e+00 835.0
21 TraesCS1D01G336400 chr5B 84.805 770 69 24 995 1747 85619517 85618779 0.000000e+00 730.0
22 TraesCS1D01G336400 chr5B 89.545 440 23 11 6008 6446 142354503 142354086 2.640000e-148 536.0
23 TraesCS1D01G336400 chr6B 86.606 769 63 24 995 1747 406881030 406880286 0.000000e+00 813.0
24 TraesCS1D01G336400 chr6B 94.444 162 6 3 6286 6446 562773620 562773461 4.990000e-61 246.0
25 TraesCS1D01G336400 chr6B 83.756 197 11 7 1014 1210 653201384 653201209 4.000000e-37 167.0
26 TraesCS1D01G336400 chr2B 91.136 440 23 10 6008 6446 619776661 619777085 3.350000e-162 582.0
27 TraesCS1D01G336400 chr3B 89.103 312 28 4 1431 1742 275005963 275005658 3.650000e-102 383.0
28 TraesCS1D01G336400 chr3B 94.444 162 6 3 6286 6446 122392542 122392383 4.990000e-61 246.0
29 TraesCS1D01G336400 chr7B 88.215 297 26 6 995 1291 112652885 112653172 4.780000e-91 346.0
30 TraesCS1D01G336400 chr7B 83.612 299 25 9 1450 1747 112653205 112653480 6.410000e-65 259.0
31 TraesCS1D01G336400 chr7B 94.444 162 6 3 6286 6446 91100470 91100311 4.990000e-61 246.0
32 TraesCS1D01G336400 chr3D 85.588 340 25 9 1409 1747 218736447 218736763 1.040000e-87 335.0
33 TraesCS1D01G336400 chr3D 86.644 292 23 6 995 1285 218735546 218735822 6.280000e-80 309.0
34 TraesCS1D01G336400 chr3D 88.426 216 15 5 1014 1228 41135196 41135402 1.070000e-62 252.0
35 TraesCS1D01G336400 chr5A 84.342 281 34 5 3708 3985 649472186 649471913 3.830000e-67 267.0
36 TraesCS1D01G336400 chr4B 84.739 249 26 7 1014 1259 654802925 654802686 8.350000e-59 239.0
37 TraesCS1D01G336400 chr4A 86.111 216 20 5 1014 1228 636216939 636216733 2.340000e-54 224.0
38 TraesCS1D01G336400 chr2A 80.000 195 14 11 6109 6290 15232624 15232806 3.160000e-23 121.0
39 TraesCS1D01G336400 chr2D 79.487 156 16 10 6109 6250 13203184 13203337 5.320000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G336400 chr1D 426593914 426600359 6445 False 3612.666667 6235 100.000000 1 6446 3 chr1D.!!$F1 6445
1 TraesCS1D01G336400 chr1B 576213960 576223102 9142 False 1027.625000 3941 88.896250 153 5963 8 chr1B.!!$F2 5810
2 TraesCS1D01G336400 chr1A 521638831 521644843 6012 False 1050.557143 3640 93.295143 21 5963 7 chr1A.!!$F2 5942
3 TraesCS1D01G336400 chr5B 85618779 85623389 4610 True 782.500000 835 85.909000 995 1747 2 chr5B.!!$R2 752
4 TraesCS1D01G336400 chr6B 406880286 406881030 744 True 813.000000 813 86.606000 995 1747 1 chr6B.!!$R1 752
5 TraesCS1D01G336400 chr7B 112652885 112653480 595 False 302.500000 346 85.913500 995 1747 2 chr7B.!!$F1 752
6 TraesCS1D01G336400 chr3D 218735546 218736763 1217 False 322.000000 335 86.116000 995 1747 2 chr3D.!!$F2 752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.108945 GTACGTACCACTGCCTGGAC 60.109 60.0 15.00 0.0 43.95 4.02 F
687 699 1.172180 ATTTCGCACCACCCACACAG 61.172 55.0 0.00 0.0 0.00 3.66 F
1973 2529 0.704664 CAGGCCTTTTTCTAGGGGGT 59.295 55.0 0.00 0.0 35.74 4.95 F
2225 3276 0.819582 CCGCTTCATGGGCTTCAATT 59.180 50.0 9.23 0.0 0.00 2.32 F
3150 4422 0.980423 AGGGACTGAGAAGAAGCCAC 59.020 55.0 0.00 0.0 37.18 5.01 F
3985 5515 0.865111 TTCCATTGCTGACGTGTTCG 59.135 50.0 0.00 0.0 43.34 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1429 1977 0.036952 ATCCTCAGACCACGCAACAG 60.037 55.000 0.00 0.0 0.00 3.16 R
2397 3669 0.511221 GTTGTTACTCGTGTGCGCAT 59.489 50.000 15.91 0.0 38.14 4.73 R
3384 4821 1.213678 CCTCAAATCCCAGAGGCATCA 59.786 52.381 0.00 0.0 44.37 3.07 R
3968 5498 2.234613 ACGAACACGTCAGCAATGG 58.765 52.632 0.00 0.0 35.22 3.16 R
4926 6956 1.418342 CGCCGTCGTATGGTTTCTGG 61.418 60.000 0.00 0.0 0.00 3.86 R
5881 8822 0.036164 TGCCATCGTTTGCACCTACT 59.964 50.000 0.00 0.0 31.31 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.668294 AAGTCCACTGCTGGTCTCG 59.332 57.895 0.00 0.00 35.11 4.04
19 20 0.827925 AAGTCCACTGCTGGTCTCGA 60.828 55.000 0.00 0.00 35.11 4.04
68 69 3.613702 CCGTCGGCGCAATCGTAC 61.614 66.667 10.83 3.65 38.14 3.67
69 70 3.956320 CGTCGGCGCAATCGTACG 61.956 66.667 10.83 9.53 38.71 3.67
70 71 2.877582 GTCGGCGCAATCGTACGT 60.878 61.111 16.05 0.00 38.57 3.57
71 72 1.583451 GTCGGCGCAATCGTACGTA 60.583 57.895 16.05 2.34 38.57 3.57
72 73 1.583451 TCGGCGCAATCGTACGTAC 60.583 57.895 15.90 15.90 38.57 3.67
73 74 2.570678 CGGCGCAATCGTACGTACC 61.571 63.158 19.67 4.60 38.14 3.34
74 75 1.516821 GGCGCAATCGTACGTACCA 60.517 57.895 19.67 7.92 38.14 3.25
75 76 1.627424 GCGCAATCGTACGTACCAC 59.373 57.895 19.67 0.00 38.14 4.16
76 77 0.799534 GCGCAATCGTACGTACCACT 60.800 55.000 19.67 0.00 38.14 4.00
77 78 0.911856 CGCAATCGTACGTACCACTG 59.088 55.000 19.67 8.78 0.00 3.66
78 79 0.643820 GCAATCGTACGTACCACTGC 59.356 55.000 19.67 15.19 0.00 4.40
79 80 1.274596 CAATCGTACGTACCACTGCC 58.725 55.000 19.67 0.00 0.00 4.85
80 81 1.135199 CAATCGTACGTACCACTGCCT 60.135 52.381 19.67 0.00 0.00 4.75
81 82 0.454600 ATCGTACGTACCACTGCCTG 59.545 55.000 19.67 3.56 0.00 4.85
83 84 1.588824 CGTACGTACCACTGCCTGGA 61.589 60.000 19.67 0.00 43.95 3.86
84 85 0.108945 GTACGTACCACTGCCTGGAC 60.109 60.000 15.00 0.00 43.95 4.02
104 105 3.630148 CACCGCACCGATCGATGC 61.630 66.667 24.95 24.95 38.52 3.91
106 107 3.630148 CCGCACCGATCGATGCAC 61.630 66.667 32.45 6.13 42.17 4.57
107 108 3.976375 CGCACCGATCGATGCACG 61.976 66.667 32.45 14.85 42.17 5.34
111 112 4.889856 CCGATCGATGCACGGCCA 62.890 66.667 18.66 0.00 42.82 5.36
112 113 3.630148 CGATCGATGCACGGCCAC 61.630 66.667 10.26 0.00 42.82 5.01
289 301 4.735132 CGCGGCCACGAAGAAGGA 62.735 66.667 7.58 0.00 44.60 3.36
290 302 2.358247 GCGGCCACGAAGAAGGAA 60.358 61.111 2.24 0.00 44.60 3.36
291 303 2.391389 GCGGCCACGAAGAAGGAAG 61.391 63.158 2.24 0.00 44.60 3.46
292 304 1.741770 CGGCCACGAAGAAGGAAGG 60.742 63.158 2.24 0.00 44.60 3.46
293 305 1.377333 GGCCACGAAGAAGGAAGGG 60.377 63.158 0.00 0.00 0.00 3.95
294 306 1.377333 GCCACGAAGAAGGAAGGGG 60.377 63.158 0.00 0.00 0.00 4.79
295 307 1.299976 CCACGAAGAAGGAAGGGGG 59.700 63.158 0.00 0.00 0.00 5.40
684 696 1.900981 CCATTTCGCACCACCCACA 60.901 57.895 0.00 0.00 0.00 4.17
687 699 1.172180 ATTTCGCACCACCCACACAG 61.172 55.000 0.00 0.00 0.00 3.66
688 700 2.544590 TTTCGCACCACCCACACAGT 62.545 55.000 0.00 0.00 0.00 3.55
692 708 1.887242 CACCACCCACACAGTCACG 60.887 63.158 0.00 0.00 0.00 4.35
719 735 3.334583 ACTTCACATACGGACAGCATT 57.665 42.857 0.00 0.00 0.00 3.56
724 740 4.765273 TCACATACGGACAGCATTAATGT 58.235 39.130 16.61 0.00 0.00 2.71
817 836 1.711206 GATCCCGCTTACTTATCCGC 58.289 55.000 0.00 0.00 0.00 5.54
925 954 1.386772 ATCCCCTTTATCCGCCCCA 60.387 57.895 0.00 0.00 0.00 4.96
986 1031 1.608717 GAGAGATCACAGCCCCGTGT 61.609 60.000 0.00 0.00 38.12 4.49
1515 2063 1.668047 GCAGCTGCTGATTGTGGAAAC 60.668 52.381 32.30 7.30 38.21 2.78
1528 2076 3.105187 GGAAACGGTCCTGTGGTTT 57.895 52.632 0.32 0.00 43.98 3.27
1550 2098 0.817013 TTTCATCCATTTCAGGCGGC 59.183 50.000 0.00 0.00 0.00 6.53
1573 2124 1.000827 CCTCGCCAGTACTAGCATCTG 60.001 57.143 13.78 0.00 0.00 2.90
1821 2375 1.913778 TGGTTGCAGCATGAGTTCAT 58.086 45.000 2.05 0.00 39.69 2.57
1843 2398 6.487331 TCATACGTTACTTTTTGGTGACCAAT 59.513 34.615 19.03 5.60 43.55 3.16
1849 2404 5.806654 ACTTTTTGGTGACCAATGCTAAT 57.193 34.783 19.03 0.00 43.55 1.73
1851 2406 3.591196 TTTGGTGACCAATGCTAATGC 57.409 42.857 19.03 0.00 43.55 3.56
1936 2491 8.352201 TGTTCATATATGGAAGTTGCTTATTGC 58.648 33.333 12.78 0.00 43.25 3.56
1947 2503 4.717233 TTGCTTATTGCGACAATTGGAT 57.283 36.364 10.83 0.00 46.63 3.41
1949 2505 5.070770 TGCTTATTGCGACAATTGGATTT 57.929 34.783 10.83 0.00 46.63 2.17
1955 2511 4.780275 TGCGACAATTGGATTTGATTCA 57.220 36.364 10.83 0.00 0.00 2.57
1956 2512 4.735985 TGCGACAATTGGATTTGATTCAG 58.264 39.130 10.83 0.00 0.00 3.02
1961 2517 4.533311 ACAATTGGATTTGATTCAGGCCTT 59.467 37.500 0.00 0.00 0.00 4.35
1968 2524 6.153340 TGGATTTGATTCAGGCCTTTTTCTAG 59.847 38.462 0.00 0.00 0.00 2.43
1973 2529 0.704664 CAGGCCTTTTTCTAGGGGGT 59.295 55.000 0.00 0.00 35.74 4.95
1974 2530 1.920351 CAGGCCTTTTTCTAGGGGGTA 59.080 52.381 0.00 0.00 35.74 3.69
2011 2976 7.406031 AAAAGCTTTACTTCTATTTAGGGGC 57.594 36.000 13.10 0.00 37.75 5.80
2015 2980 5.760743 GCTTTACTTCTATTTAGGGGCTCTG 59.239 44.000 0.00 0.00 0.00 3.35
2225 3276 0.819582 CCGCTTCATGGGCTTCAATT 59.180 50.000 9.23 0.00 0.00 2.32
2285 3336 6.151144 CCAAACTGCCTAGTAATAAGCAACTT 59.849 38.462 0.00 0.00 35.69 2.66
2313 3585 5.469084 GGACAAGTATCCGTCTTTTTCAAGT 59.531 40.000 0.00 0.00 32.57 3.16
2387 3659 9.720769 AATATGGAAAATAATGTAGGTACCTCG 57.279 33.333 20.32 0.00 0.00 4.63
2388 3660 6.795144 TGGAAAATAATGTAGGTACCTCGA 57.205 37.500 20.32 6.46 0.00 4.04
2390 3662 7.622713 TGGAAAATAATGTAGGTACCTCGAAA 58.377 34.615 20.32 0.00 0.00 3.46
2391 3663 8.269317 TGGAAAATAATGTAGGTACCTCGAAAT 58.731 33.333 20.32 0.00 0.00 2.17
2392 3664 9.768662 GGAAAATAATGTAGGTACCTCGAAATA 57.231 33.333 20.32 7.23 0.00 1.40
2399 3671 8.888579 ATGTAGGTACCTCGAAATAAGAAATG 57.111 34.615 20.32 0.00 0.00 2.32
2400 3672 6.759827 TGTAGGTACCTCGAAATAAGAAATGC 59.240 38.462 20.32 0.00 0.00 3.56
2401 3673 4.809426 AGGTACCTCGAAATAAGAAATGCG 59.191 41.667 9.21 0.00 0.00 4.73
2402 3674 3.675467 ACCTCGAAATAAGAAATGCGC 57.325 42.857 0.00 0.00 0.00 6.09
2403 3675 3.006940 ACCTCGAAATAAGAAATGCGCA 58.993 40.909 14.96 14.96 0.00 6.09
2404 3676 3.181510 ACCTCGAAATAAGAAATGCGCAC 60.182 43.478 14.90 0.00 0.00 5.34
2405 3677 3.181511 CCTCGAAATAAGAAATGCGCACA 60.182 43.478 14.90 0.00 0.00 4.57
2407 3679 2.521933 CGAAATAAGAAATGCGCACACG 59.478 45.455 14.90 2.77 44.07 4.49
2408 3680 3.723542 CGAAATAAGAAATGCGCACACGA 60.724 43.478 14.90 0.00 43.93 4.35
2409 3681 3.389687 AATAAGAAATGCGCACACGAG 57.610 42.857 14.90 0.00 43.93 4.18
2491 3763 8.211629 ACCAGAGTACAGTCTTGTTTAGAAAAT 58.788 33.333 0.00 0.00 38.76 1.82
2492 3764 9.057089 CCAGAGTACAGTCTTGTTTAGAAAATT 57.943 33.333 0.00 0.00 38.76 1.82
2504 3776 7.354751 TGTTTAGAAAATTGGGTGCTACTTT 57.645 32.000 0.00 0.00 0.00 2.66
2557 3829 4.876580 ACGAGGACCCTTATACCTACTTT 58.123 43.478 0.00 0.00 33.89 2.66
2778 4050 4.580868 TGACAAAACCGCCTAATATGTCA 58.419 39.130 0.00 0.00 42.22 3.58
3095 4367 5.825593 ATCCGTGGTACATCTCCAATTAT 57.174 39.130 0.00 0.00 44.52 1.28
3129 4401 9.905713 TCCAGTTTATGATTTACTAAAGCAGAT 57.094 29.630 5.75 0.00 40.47 2.90
3150 4422 0.980423 AGGGACTGAGAAGAAGCCAC 59.020 55.000 0.00 0.00 37.18 5.01
3187 4459 7.118680 TGTCATTCTTTCGTTTGGGTAGTATTC 59.881 37.037 0.00 0.00 0.00 1.75
3249 4521 9.566432 ACAGCTTAGGAGATTAATCAAAATAGG 57.434 33.333 17.56 6.52 0.00 2.57
3267 4539 3.382083 AGGGACAATGATTAACCACCC 57.618 47.619 0.00 0.00 36.67 4.61
3453 4890 1.953686 CAAAACGTGGATGAACCCAGT 59.046 47.619 0.00 0.00 36.78 4.00
3460 4897 3.058501 CGTGGATGAACCCAGTAAACAAC 60.059 47.826 0.00 0.00 36.78 3.32
3464 4901 4.698780 GGATGAACCCAGTAAACAACCTAC 59.301 45.833 0.00 0.00 0.00 3.18
3491 4928 7.465353 TTCCTCATCTGTATTTTGATTTGCA 57.535 32.000 0.00 0.00 0.00 4.08
3811 5340 7.069986 AGCTGAGGTGAGGTCTAAATATTCTA 58.930 38.462 0.00 0.00 0.00 2.10
3847 5376 4.823442 TGCTAGCTGATTGGTGGATTATTG 59.177 41.667 17.23 0.00 0.00 1.90
3871 5400 7.782049 TGATGACTACTGGATTACAAAGTAGG 58.218 38.462 12.33 0.00 45.02 3.18
3968 5498 8.638565 CATGTTCATTCATTTTAACCTCGTTTC 58.361 33.333 0.00 0.00 0.00 2.78
3985 5515 0.865111 TTCCATTGCTGACGTGTTCG 59.135 50.000 0.00 0.00 43.34 3.95
4070 5605 8.322906 TGTCAGTTTCTGGTAGTTAATTCATG 57.677 34.615 0.00 0.00 31.51 3.07
4163 5699 2.939103 GTGCGAGGAATCTGCTTTATGT 59.061 45.455 0.00 0.00 0.00 2.29
4287 5823 5.124936 TGTTAGCTTCTTCACAGCGATACTA 59.875 40.000 0.00 0.00 42.55 1.82
4288 5824 4.035278 AGCTTCTTCACAGCGATACTAC 57.965 45.455 0.00 0.00 42.55 2.73
4290 5826 3.731264 GCTTCTTCACAGCGATACTACGT 60.731 47.826 0.00 0.00 35.59 3.57
4291 5827 3.400505 TCTTCACAGCGATACTACGTG 57.599 47.619 0.00 0.00 35.59 4.49
4325 5861 5.139727 TGAATCAAAAGAAGGACCACATGT 58.860 37.500 0.00 0.00 0.00 3.21
4337 5873 4.709397 AGGACCACATGTTCTTTTTGACAA 59.291 37.500 0.00 0.00 22.26 3.18
4450 5987 6.274908 ACCTCTTCCACCTAGTTATTCCTTTT 59.725 38.462 0.00 0.00 0.00 2.27
4455 5992 4.569865 CCACCTAGTTATTCCTTTTGCCCT 60.570 45.833 0.00 0.00 0.00 5.19
4568 6113 5.840693 TCATGCATTCTCCATCTAGTAGGAA 59.159 40.000 0.00 0.00 32.57 3.36
4771 6800 1.742831 GCATTTGATAAGTGACCGCCA 59.257 47.619 0.00 0.00 0.00 5.69
4875 6905 5.643379 TGGCCTGAACATTGTTTTATCTC 57.357 39.130 3.32 0.00 0.00 2.75
5531 8457 4.778143 CGGGAGAAAGGGGTGGCG 62.778 72.222 0.00 0.00 0.00 5.69
5661 8587 2.435372 GGTGATTTACCCATGGAGCA 57.565 50.000 15.22 0.00 44.15 4.26
5709 8635 5.323900 CGTTTTACCGTTCACGTAGATAGA 58.676 41.667 0.00 0.00 37.74 1.98
5710 8636 5.225949 CGTTTTACCGTTCACGTAGATAGAC 59.774 44.000 0.00 0.00 37.74 2.59
5711 8637 5.878332 TTTACCGTTCACGTAGATAGACA 57.122 39.130 0.00 0.00 37.74 3.41
5712 8638 5.475273 TTACCGTTCACGTAGATAGACAG 57.525 43.478 0.00 0.00 37.74 3.51
5713 8639 3.603532 ACCGTTCACGTAGATAGACAGA 58.396 45.455 0.00 0.00 37.74 3.41
5714 8640 4.005650 ACCGTTCACGTAGATAGACAGAA 58.994 43.478 0.00 0.00 37.74 3.02
5715 8641 4.094590 ACCGTTCACGTAGATAGACAGAAG 59.905 45.833 0.00 0.00 37.74 2.85
5716 8642 4.029704 CGTTCACGTAGATAGACAGAAGC 58.970 47.826 0.00 0.00 34.11 3.86
5717 8643 4.201832 CGTTCACGTAGATAGACAGAAGCT 60.202 45.833 0.00 0.00 34.11 3.74
5718 8644 5.642686 GTTCACGTAGATAGACAGAAGCTT 58.357 41.667 0.00 0.00 0.00 3.74
5719 8645 5.236655 TCACGTAGATAGACAGAAGCTTG 57.763 43.478 2.10 0.00 0.00 4.01
5727 8665 3.051081 AGACAGAAGCTTGACATGGTC 57.949 47.619 2.10 2.28 0.00 4.02
5778 8716 3.869065 ACCCTTGTACATGTCGTTATGG 58.131 45.455 0.00 0.00 32.32 2.74
5800 8738 0.112412 ACCTTCCTCCAATGCCGTTT 59.888 50.000 0.00 0.00 0.00 3.60
5848 8788 8.097662 TGTGGTCTACATGTCATTGTAATGTTA 58.902 33.333 0.00 0.00 36.08 2.41
5886 8830 9.599866 TTGTATCATTGTCTGATTGTTAGTAGG 57.400 33.333 0.00 0.00 42.07 3.18
5897 8841 5.121611 TGATTGTTAGTAGGTGCAAACGATG 59.878 40.000 4.51 0.00 0.00 3.84
5904 8848 0.179156 GGTGCAAACGATGGCATGAG 60.179 55.000 3.81 0.67 42.75 2.90
5911 8855 4.297510 CAAACGATGGCATGAGTGAAAAA 58.702 39.130 3.81 0.00 0.00 1.94
5934 8878 0.250858 CAGCAACTCACCACCATGGA 60.251 55.000 21.47 0.00 40.96 3.41
5938 8882 0.850100 AACTCACCACCATGGAACCA 59.150 50.000 21.47 0.00 40.96 3.67
5951 8895 2.607499 TGGAACCAAAATGGATGCAGT 58.393 42.857 2.85 0.00 40.96 4.40
5952 8896 3.772387 TGGAACCAAAATGGATGCAGTA 58.228 40.909 2.85 0.00 40.96 2.74
5953 8897 3.763360 TGGAACCAAAATGGATGCAGTAG 59.237 43.478 2.85 0.00 40.96 2.57
5954 8898 3.763897 GGAACCAAAATGGATGCAGTAGT 59.236 43.478 2.85 0.00 40.96 2.73
5956 8900 5.163652 GGAACCAAAATGGATGCAGTAGTAC 60.164 44.000 2.85 0.00 40.96 2.73
5958 8902 5.509498 ACCAAAATGGATGCAGTAGTACAT 58.491 37.500 2.85 0.00 40.96 2.29
5959 8903 6.658849 ACCAAAATGGATGCAGTAGTACATA 58.341 36.000 2.85 0.00 40.96 2.29
5960 8904 6.542370 ACCAAAATGGATGCAGTAGTACATAC 59.458 38.462 2.85 0.00 40.96 2.39
5961 8905 6.017109 CCAAAATGGATGCAGTAGTACATACC 60.017 42.308 2.52 0.00 40.96 2.73
5962 8906 5.887214 AATGGATGCAGTAGTACATACCA 57.113 39.130 2.52 5.33 34.67 3.25
5963 8907 4.937201 TGGATGCAGTAGTACATACCAG 57.063 45.455 2.52 0.00 34.67 4.00
5966 8910 5.301045 TGGATGCAGTAGTACATACCAGTAC 59.699 44.000 2.52 0.00 43.61 2.73
5969 8913 4.573607 TGCAGTAGTACATACCAGTACGAG 59.426 45.833 2.52 0.00 46.85 4.18
5970 8914 4.554330 GCAGTAGTACATACCAGTACGAGC 60.554 50.000 2.52 0.00 46.85 5.03
5972 8916 2.636830 AGTACATACCAGTACGAGCGT 58.363 47.619 0.00 0.00 46.85 5.07
5973 8917 3.012518 AGTACATACCAGTACGAGCGTT 58.987 45.455 0.00 0.00 46.85 4.84
5975 8919 4.818546 AGTACATACCAGTACGAGCGTTAT 59.181 41.667 0.00 0.00 46.85 1.89
5976 8920 3.961182 ACATACCAGTACGAGCGTTATG 58.039 45.455 0.00 5.59 0.00 1.90
5977 8921 3.628942 ACATACCAGTACGAGCGTTATGA 59.371 43.478 14.78 0.00 0.00 2.15
5979 8923 3.795623 ACCAGTACGAGCGTTATGATT 57.204 42.857 0.00 0.00 0.00 2.57
5980 8924 4.119442 ACCAGTACGAGCGTTATGATTT 57.881 40.909 0.00 0.00 0.00 2.17
5981 8925 4.501071 ACCAGTACGAGCGTTATGATTTT 58.499 39.130 0.00 0.00 0.00 1.82
5982 8926 4.328983 ACCAGTACGAGCGTTATGATTTTG 59.671 41.667 0.00 0.00 0.00 2.44
5983 8927 4.328983 CCAGTACGAGCGTTATGATTTTGT 59.671 41.667 0.00 0.00 0.00 2.83
5984 8928 5.517411 CCAGTACGAGCGTTATGATTTTGTA 59.483 40.000 0.00 0.00 0.00 2.41
5986 8930 7.254319 CCAGTACGAGCGTTATGATTTTGTATT 60.254 37.037 0.00 0.00 0.00 1.89
5988 8932 9.304731 AGTACGAGCGTTATGATTTTGTATTTA 57.695 29.630 0.00 0.00 0.00 1.40
5989 8933 9.564041 GTACGAGCGTTATGATTTTGTATTTAG 57.436 33.333 0.00 0.00 0.00 1.85
5990 8934 8.193250 ACGAGCGTTATGATTTTGTATTTAGT 57.807 30.769 0.00 0.00 0.00 2.24
5991 8935 9.304731 ACGAGCGTTATGATTTTGTATTTAGTA 57.695 29.630 0.00 0.00 0.00 1.82
6003 8947 9.819267 ATTTTGTATTTAGTACAGACTAGAGGC 57.181 33.333 0.00 0.00 43.79 4.70
6004 8948 7.949690 TTGTATTTAGTACAGACTAGAGGCA 57.050 36.000 0.00 0.00 43.79 4.75
6005 8949 8.534954 TTGTATTTAGTACAGACTAGAGGCAT 57.465 34.615 0.00 0.00 43.79 4.40
6006 8950 9.636789 TTGTATTTAGTACAGACTAGAGGCATA 57.363 33.333 0.00 0.00 43.79 3.14
6009 8953 2.879646 AGTACAGACTAGAGGCATACGC 59.120 50.000 0.00 0.00 32.65 4.42
6019 8963 3.568686 GCATACGCCGTTTGGTCA 58.431 55.556 9.64 0.00 37.67 4.02
6020 8964 1.870383 GCATACGCCGTTTGGTCAA 59.130 52.632 9.64 0.00 37.67 3.18
6021 8965 0.238817 GCATACGCCGTTTGGTCAAA 59.761 50.000 9.64 0.00 37.67 2.69
6022 8966 1.335142 GCATACGCCGTTTGGTCAAAA 60.335 47.619 9.64 0.00 37.67 2.44
6023 8967 2.859032 GCATACGCCGTTTGGTCAAAAA 60.859 45.455 9.64 0.00 37.67 1.94
6025 8969 2.128367 ACGCCGTTTGGTCAAAAATC 57.872 45.000 0.00 0.00 37.67 2.17
6026 8970 1.405821 ACGCCGTTTGGTCAAAAATCA 59.594 42.857 0.00 0.00 37.67 2.57
6027 8971 2.159226 ACGCCGTTTGGTCAAAAATCAA 60.159 40.909 0.00 0.00 37.67 2.57
6028 8972 2.860735 CGCCGTTTGGTCAAAAATCAAA 59.139 40.909 0.00 0.00 37.67 2.69
6029 8973 3.307242 CGCCGTTTGGTCAAAAATCAAAA 59.693 39.130 0.00 0.00 37.67 2.44
6030 8974 4.025313 CGCCGTTTGGTCAAAAATCAAAAT 60.025 37.500 0.00 0.00 37.67 1.82
6031 8975 5.204101 GCCGTTTGGTCAAAAATCAAAATG 58.796 37.500 0.00 0.00 37.67 2.32
6032 8976 5.204101 CCGTTTGGTCAAAAATCAAAATGC 58.796 37.500 0.00 0.00 33.05 3.56
6033 8977 5.007528 CCGTTTGGTCAAAAATCAAAATGCT 59.992 36.000 0.00 0.00 33.05 3.79
6034 8978 6.458070 CCGTTTGGTCAAAAATCAAAATGCTT 60.458 34.615 0.00 0.00 33.05 3.91
6037 11839 4.820716 TGGTCAAAAATCAAAATGCTTGGG 59.179 37.500 0.00 0.00 0.00 4.12
6040 11842 5.008911 GTCAAAAATCAAAATGCTTGGGCTT 59.991 36.000 0.00 0.00 39.59 4.35
6042 11844 4.354893 AAATCAAAATGCTTGGGCTTGA 57.645 36.364 0.00 0.00 39.59 3.02
6049 11851 2.529780 TGCTTGGGCTTGATTGTTTG 57.470 45.000 0.00 0.00 39.59 2.93
6056 11858 3.706594 TGGGCTTGATTGTTTGGTTTACA 59.293 39.130 0.00 0.00 0.00 2.41
6058 11860 4.306600 GGCTTGATTGTTTGGTTTACAGG 58.693 43.478 0.00 0.00 0.00 4.00
6060 11862 4.306600 CTTGATTGTTTGGTTTACAGGCC 58.693 43.478 0.00 0.00 0.00 5.19
6062 11864 3.900601 TGATTGTTTGGTTTACAGGCCAT 59.099 39.130 5.01 0.00 34.37 4.40
6065 11867 4.065321 TGTTTGGTTTACAGGCCATTTG 57.935 40.909 5.01 0.00 34.37 2.32
6077 11879 3.558674 CCATTTGGGCTCTCGTTCT 57.441 52.632 0.00 0.00 0.00 3.01
6078 11880 1.826385 CCATTTGGGCTCTCGTTCTT 58.174 50.000 0.00 0.00 0.00 2.52
6079 11881 2.162681 CCATTTGGGCTCTCGTTCTTT 58.837 47.619 0.00 0.00 0.00 2.52
6080 11882 2.558359 CCATTTGGGCTCTCGTTCTTTT 59.442 45.455 0.00 0.00 0.00 2.27
6081 11883 3.568538 CATTTGGGCTCTCGTTCTTTTG 58.431 45.455 0.00 0.00 0.00 2.44
6083 11885 0.472471 TGGGCTCTCGTTCTTTTGGT 59.528 50.000 0.00 0.00 0.00 3.67
6084 11886 0.875059 GGGCTCTCGTTCTTTTGGTG 59.125 55.000 0.00 0.00 0.00 4.17
6085 11887 1.594331 GGCTCTCGTTCTTTTGGTGT 58.406 50.000 0.00 0.00 0.00 4.16
6086 11888 1.531578 GGCTCTCGTTCTTTTGGTGTC 59.468 52.381 0.00 0.00 0.00 3.67
6087 11889 2.210116 GCTCTCGTTCTTTTGGTGTCA 58.790 47.619 0.00 0.00 0.00 3.58
6088 11890 2.808543 GCTCTCGTTCTTTTGGTGTCAT 59.191 45.455 0.00 0.00 0.00 3.06
6089 11891 3.994392 GCTCTCGTTCTTTTGGTGTCATA 59.006 43.478 0.00 0.00 0.00 2.15
6090 11892 4.451096 GCTCTCGTTCTTTTGGTGTCATAA 59.549 41.667 0.00 0.00 0.00 1.90
6093 11895 5.237779 TCTCGTTCTTTTGGTGTCATAAACC 59.762 40.000 0.00 0.00 38.26 3.27
6094 11896 4.276431 TCGTTCTTTTGGTGTCATAAACCC 59.724 41.667 0.00 0.00 36.83 4.11
6095 11897 4.036971 CGTTCTTTTGGTGTCATAAACCCA 59.963 41.667 0.00 0.00 36.83 4.51
6096 11898 5.450688 CGTTCTTTTGGTGTCATAAACCCAA 60.451 40.000 0.00 0.00 36.80 4.12
6097 11899 6.342111 GTTCTTTTGGTGTCATAAACCCAAA 58.658 36.000 0.00 0.00 41.98 3.28
6099 11901 6.342111 TCTTTTGGTGTCATAAACCCAAAAC 58.658 36.000 11.40 0.00 44.44 2.43
6101 11903 5.878406 TTGGTGTCATAAACCCAAAACAT 57.122 34.783 0.00 0.00 36.12 2.71
6102 11904 6.978674 TTGGTGTCATAAACCCAAAACATA 57.021 33.333 0.00 0.00 36.12 2.29
6104 11906 5.047660 TGGTGTCATAAACCCAAAACATAGC 60.048 40.000 0.00 0.00 36.83 2.97
6106 11908 6.451393 GTGTCATAAACCCAAAACATAGCAA 58.549 36.000 0.00 0.00 0.00 3.91
6108 11910 5.576774 GTCATAAACCCAAAACATAGCAAGC 59.423 40.000 0.00 0.00 0.00 4.01
6110 11912 4.414337 AAACCCAAAACATAGCAAGCAA 57.586 36.364 0.00 0.00 0.00 3.91
6112 11914 4.622260 ACCCAAAACATAGCAAGCAATT 57.378 36.364 0.00 0.00 0.00 2.32
6113 11915 4.317488 ACCCAAAACATAGCAAGCAATTG 58.683 39.130 0.00 0.00 0.00 2.32
6120 11922 4.584688 GCAAGCAATTGCAGGGAC 57.415 55.556 30.89 12.41 46.60 4.46
6121 11923 1.079612 GCAAGCAATTGCAGGGACC 60.080 57.895 30.89 9.97 46.60 4.46
6123 11925 0.971386 CAAGCAATTGCAGGGACCTT 59.029 50.000 30.89 12.65 45.16 3.50
6124 11926 2.170166 CAAGCAATTGCAGGGACCTTA 58.830 47.619 30.89 0.00 45.16 2.69
6126 11928 2.381911 AGCAATTGCAGGGACCTTATG 58.618 47.619 30.89 0.00 45.16 1.90
6127 11929 2.025037 AGCAATTGCAGGGACCTTATGA 60.025 45.455 30.89 0.00 45.16 2.15
6128 11930 2.760092 GCAATTGCAGGGACCTTATGAA 59.240 45.455 25.36 0.00 41.59 2.57
6130 11932 4.747810 CAATTGCAGGGACCTTATGAAAC 58.252 43.478 0.00 0.00 0.00 2.78
6131 11933 3.517296 TTGCAGGGACCTTATGAAACA 57.483 42.857 0.00 0.00 0.00 2.83
6132 11934 3.737559 TGCAGGGACCTTATGAAACAT 57.262 42.857 0.00 0.00 0.00 2.71
6133 11935 3.620488 TGCAGGGACCTTATGAAACATC 58.380 45.455 0.00 0.00 0.00 3.06
6135 11937 3.624707 GCAGGGACCTTATGAAACATCCA 60.625 47.826 0.00 0.00 0.00 3.41
6136 11938 3.947834 CAGGGACCTTATGAAACATCCAC 59.052 47.826 0.00 0.00 0.00 4.02
6137 11939 3.852578 AGGGACCTTATGAAACATCCACT 59.147 43.478 0.00 0.00 0.00 4.00
6138 11940 3.947834 GGGACCTTATGAAACATCCACTG 59.052 47.826 0.00 0.00 0.00 3.66
6139 11941 4.324254 GGGACCTTATGAAACATCCACTGA 60.324 45.833 0.00 0.00 0.00 3.41
6140 11942 5.253330 GGACCTTATGAAACATCCACTGAA 58.747 41.667 0.00 0.00 0.00 3.02
6141 11943 5.355350 GGACCTTATGAAACATCCACTGAAG 59.645 44.000 0.00 0.00 0.00 3.02
6143 11945 6.306987 ACCTTATGAAACATCCACTGAAGTT 58.693 36.000 0.00 0.00 34.06 2.66
6144 11946 6.207417 ACCTTATGAAACATCCACTGAAGTTG 59.793 38.462 0.00 0.00 33.03 3.16
6145 11947 6.430925 CCTTATGAAACATCCACTGAAGTTGA 59.569 38.462 0.00 0.00 33.03 3.18
6146 11948 5.954296 ATGAAACATCCACTGAAGTTGAG 57.046 39.130 0.00 0.00 33.03 3.02
6147 11949 3.565482 TGAAACATCCACTGAAGTTGAGC 59.435 43.478 0.00 0.00 33.03 4.26
6148 11950 3.498774 AACATCCACTGAAGTTGAGCT 57.501 42.857 0.00 0.00 31.59 4.09
6149 11951 2.775890 ACATCCACTGAAGTTGAGCTG 58.224 47.619 0.00 0.00 0.00 4.24
6150 11952 2.369860 ACATCCACTGAAGTTGAGCTGA 59.630 45.455 0.00 0.00 0.00 4.26
6151 11953 3.181451 ACATCCACTGAAGTTGAGCTGAA 60.181 43.478 0.00 0.00 0.00 3.02
6153 11955 4.890158 TCCACTGAAGTTGAGCTGAATA 57.110 40.909 0.00 0.00 0.00 1.75
6154 11956 5.227569 TCCACTGAAGTTGAGCTGAATAA 57.772 39.130 0.00 0.00 0.00 1.40
6170 11972 6.258230 CTGAATAAGCAACTTGAATGTCCA 57.742 37.500 0.00 0.00 0.00 4.02
6171 11973 6.012658 TGAATAAGCAACTTGAATGTCCAC 57.987 37.500 0.00 0.00 0.00 4.02
6172 11974 5.534278 TGAATAAGCAACTTGAATGTCCACA 59.466 36.000 0.00 0.00 0.00 4.17
6173 11975 6.209192 TGAATAAGCAACTTGAATGTCCACAT 59.791 34.615 0.00 0.00 38.41 3.21
6176 11978 4.397420 AGCAACTTGAATGTCCACATACA 58.603 39.130 0.00 0.00 35.10 2.29
6177 11979 5.012239 AGCAACTTGAATGTCCACATACAT 58.988 37.500 0.00 0.00 41.87 2.29
6178 11980 6.179756 AGCAACTTGAATGTCCACATACATA 58.820 36.000 0.00 0.00 39.16 2.29
6180 11982 6.747280 GCAACTTGAATGTCCACATACATAAC 59.253 38.462 0.00 0.00 39.16 1.89
6181 11983 7.574779 GCAACTTGAATGTCCACATACATAACA 60.575 37.037 0.00 0.00 39.16 2.41
6182 11984 7.615582 ACTTGAATGTCCACATACATAACAG 57.384 36.000 0.00 0.00 39.16 3.16
6183 11985 7.394016 ACTTGAATGTCCACATACATAACAGA 58.606 34.615 0.00 0.00 39.16 3.41
6184 11986 7.882791 ACTTGAATGTCCACATACATAACAGAA 59.117 33.333 0.00 0.00 39.16 3.02
6185 11987 8.628630 TTGAATGTCCACATACATAACAGAAA 57.371 30.769 0.00 0.00 39.16 2.52
6186 11988 8.039603 TGAATGTCCACATACATAACAGAAAC 57.960 34.615 0.00 0.00 39.16 2.78
6187 11989 7.663493 TGAATGTCCACATACATAACAGAAACA 59.337 33.333 0.00 0.00 39.16 2.83
6188 11990 8.579850 AATGTCCACATACATAACAGAAACAT 57.420 30.769 0.00 0.00 39.16 2.71
6189 11991 7.376435 TGTCCACATACATAACAGAAACATG 57.624 36.000 0.00 0.00 0.00 3.21
6190 11992 7.164803 TGTCCACATACATAACAGAAACATGA 58.835 34.615 0.00 0.00 0.00 3.07
6191 11993 7.119116 TGTCCACATACATAACAGAAACATGAC 59.881 37.037 0.00 0.00 0.00 3.06
6192 11994 7.119116 GTCCACATACATAACAGAAACATGACA 59.881 37.037 0.00 0.00 0.00 3.58
6194 11996 9.108284 CCACATACATAACAGAAACATGACATA 57.892 33.333 0.00 0.00 0.00 2.29
6195 11997 9.920826 CACATACATAACAGAAACATGACATAC 57.079 33.333 0.00 0.00 0.00 2.39
6196 11998 9.665719 ACATACATAACAGAAACATGACATACA 57.334 29.630 0.00 0.00 0.00 2.29
6204 12006 9.587772 AACAGAAACATGACATACATAGAGTAC 57.412 33.333 0.00 0.00 37.46 2.73
6205 12007 8.749354 ACAGAAACATGACATACATAGAGTACA 58.251 33.333 0.00 0.00 37.46 2.90
6207 12009 8.972127 AGAAACATGACATACATAGAGTACACT 58.028 33.333 0.00 0.00 37.46 3.55
6208 12010 8.932945 AAACATGACATACATAGAGTACACTG 57.067 34.615 0.00 0.00 37.46 3.66
6209 12011 7.881775 ACATGACATACATAGAGTACACTGA 57.118 36.000 0.00 0.00 37.46 3.41
6210 12012 8.293699 ACATGACATACATAGAGTACACTGAA 57.706 34.615 0.00 0.00 37.46 3.02
6211 12013 8.749354 ACATGACATACATAGAGTACACTGAAA 58.251 33.333 0.00 0.00 37.46 2.69
6212 12014 9.755804 CATGACATACATAGAGTACACTGAAAT 57.244 33.333 2.75 0.00 37.46 2.17
6223 12025 7.952671 AGAGTACACTGAAATTAAGAGACACA 58.047 34.615 0.00 0.00 0.00 3.72
6224 12026 8.589338 AGAGTACACTGAAATTAAGAGACACAT 58.411 33.333 0.00 0.00 0.00 3.21
6226 12028 9.640963 AGTACACTGAAATTAAGAGACACATAC 57.359 33.333 0.00 0.00 0.00 2.39
6227 12029 7.582435 ACACTGAAATTAAGAGACACATACG 57.418 36.000 0.00 0.00 0.00 3.06
6228 12030 7.375834 ACACTGAAATTAAGAGACACATACGA 58.624 34.615 0.00 0.00 0.00 3.43
6230 12032 9.516314 CACTGAAATTAAGAGACACATACGATA 57.484 33.333 0.00 0.00 0.00 2.92
6237 12039 9.737427 ATTAAGAGACACATACGATAAGTCTTG 57.263 33.333 0.00 0.00 39.47 3.02
6238 12040 5.583495 AGAGACACATACGATAAGTCTTGC 58.417 41.667 0.00 0.00 39.47 4.01
6239 12041 4.683832 AGACACATACGATAAGTCTTGCC 58.316 43.478 0.00 0.00 36.21 4.52
6240 12042 4.159693 AGACACATACGATAAGTCTTGCCA 59.840 41.667 0.00 0.00 36.21 4.92
6242 12044 4.180817 CACATACGATAAGTCTTGCCACA 58.819 43.478 0.00 0.00 0.00 4.17
6243 12045 4.629634 CACATACGATAAGTCTTGCCACAA 59.370 41.667 0.00 0.00 0.00 3.33
6245 12047 3.402628 ACGATAAGTCTTGCCACAACT 57.597 42.857 0.00 0.00 0.00 3.16
6246 12048 3.326747 ACGATAAGTCTTGCCACAACTC 58.673 45.455 0.00 0.00 0.00 3.01
6247 12049 3.244078 ACGATAAGTCTTGCCACAACTCA 60.244 43.478 0.00 0.00 0.00 3.41
6248 12050 3.935203 CGATAAGTCTTGCCACAACTCAT 59.065 43.478 0.00 0.00 0.00 2.90
6249 12051 5.109210 CGATAAGTCTTGCCACAACTCATA 58.891 41.667 0.00 0.00 0.00 2.15
6250 12052 5.580691 CGATAAGTCTTGCCACAACTCATAA 59.419 40.000 0.00 0.00 0.00 1.90
6251 12053 6.455646 CGATAAGTCTTGCCACAACTCATAAC 60.456 42.308 0.00 0.00 0.00 1.89
6252 12054 3.412386 AGTCTTGCCACAACTCATAACC 58.588 45.455 0.00 0.00 0.00 2.85
6253 12055 3.146066 GTCTTGCCACAACTCATAACCA 58.854 45.455 0.00 0.00 0.00 3.67
6255 12057 4.941263 GTCTTGCCACAACTCATAACCATA 59.059 41.667 0.00 0.00 0.00 2.74
6256 12058 4.941263 TCTTGCCACAACTCATAACCATAC 59.059 41.667 0.00 0.00 0.00 2.39
6258 12060 3.009584 TGCCACAACTCATAACCATACCA 59.990 43.478 0.00 0.00 0.00 3.25
6259 12061 3.627577 GCCACAACTCATAACCATACCAG 59.372 47.826 0.00 0.00 0.00 4.00
6260 12062 4.199310 CCACAACTCATAACCATACCAGG 58.801 47.826 0.00 0.00 0.00 4.45
6262 12064 4.635765 CACAACTCATAACCATACCAGGTG 59.364 45.833 0.76 0.00 42.25 4.00
6263 12065 3.560636 ACTCATAACCATACCAGGTGC 57.439 47.619 0.76 0.00 42.25 5.01
6265 12067 3.459598 ACTCATAACCATACCAGGTGCAT 59.540 43.478 0.76 0.00 42.25 3.96
6267 12069 2.727123 TAACCATACCAGGTGCATGG 57.273 50.000 17.20 17.20 42.25 3.66
6268 12070 0.033208 AACCATACCAGGTGCATGGG 60.033 55.000 21.29 9.87 45.25 4.00
6269 12071 1.214305 ACCATACCAGGTGCATGGGT 61.214 55.000 21.29 11.03 45.25 4.51
6270 12072 0.466189 CCATACCAGGTGCATGGGTC 60.466 60.000 12.35 0.00 45.25 4.46
6271 12073 0.255604 CATACCAGGTGCATGGGTCA 59.744 55.000 11.02 0.00 45.25 4.02
6272 12074 0.255890 ATACCAGGTGCATGGGTCAC 59.744 55.000 11.02 0.00 45.25 3.67
6277 12079 4.625800 GTGCATGGGTCACCTCTC 57.374 61.111 0.00 0.00 37.76 3.20
6278 12080 1.078143 GTGCATGGGTCACCTCTCC 60.078 63.158 0.00 0.00 37.76 3.71
6279 12081 2.187946 GCATGGGTCACCTCTCCG 59.812 66.667 0.00 0.00 37.76 4.63
6282 12084 2.060980 ATGGGTCACCTCTCCGAGC 61.061 63.158 0.00 0.00 37.76 5.03
6283 12085 3.462678 GGGTCACCTCTCCGAGCC 61.463 72.222 0.00 0.00 42.14 4.70
6285 12087 1.076923 GGTCACCTCTCCGAGCCTA 60.077 63.158 0.00 0.00 0.00 3.93
6286 12088 0.683504 GGTCACCTCTCCGAGCCTAA 60.684 60.000 0.00 0.00 0.00 2.69
6287 12089 1.404843 GTCACCTCTCCGAGCCTAAT 58.595 55.000 0.00 0.00 0.00 1.73
6288 12090 1.338655 GTCACCTCTCCGAGCCTAATC 59.661 57.143 0.00 0.00 0.00 1.75
6290 12092 1.339610 CACCTCTCCGAGCCTAATCAG 59.660 57.143 0.00 0.00 0.00 2.90
6291 12093 0.316841 CCTCTCCGAGCCTAATCAGC 59.683 60.000 0.00 0.00 0.00 4.26
6294 12096 0.749649 CTCCGAGCCTAATCAGCTGT 59.250 55.000 14.67 0.00 41.75 4.40
6295 12097 0.461548 TCCGAGCCTAATCAGCTGTG 59.538 55.000 14.67 2.90 41.75 3.66
6296 12098 1.156645 CCGAGCCTAATCAGCTGTGC 61.157 60.000 14.67 9.84 41.75 4.57
6297 12099 0.460811 CGAGCCTAATCAGCTGTGCA 60.461 55.000 14.67 0.00 41.75 4.57
6298 12100 1.297664 GAGCCTAATCAGCTGTGCAG 58.702 55.000 14.67 8.73 41.75 4.41
6300 12102 0.107508 GCCTAATCAGCTGTGCAGGA 60.108 55.000 24.79 4.03 0.00 3.86
6301 12103 1.679944 GCCTAATCAGCTGTGCAGGAA 60.680 52.381 24.79 3.36 0.00 3.36
6302 12104 2.286872 CCTAATCAGCTGTGCAGGAAG 58.713 52.381 14.67 3.19 0.00 3.46
6303 12105 1.669779 CTAATCAGCTGTGCAGGAAGC 59.330 52.381 14.67 7.70 45.96 3.86
6337 12139 6.570672 CAGAATGCTTTATATCATGCCACT 57.429 37.500 0.00 0.00 0.00 4.00
6338 12140 6.978338 CAGAATGCTTTATATCATGCCACTT 58.022 36.000 0.00 0.00 0.00 3.16
6341 12143 9.305555 AGAATGCTTTATATCATGCCACTTAAT 57.694 29.630 0.00 0.00 0.00 1.40
6346 12148 9.626045 GCTTTATATCATGCCACTTAATAAACC 57.374 33.333 0.00 0.00 0.00 3.27
6349 12151 9.634021 TTATATCATGCCACTTAATAAACCACA 57.366 29.630 0.00 0.00 0.00 4.17
6350 12152 6.849085 ATCATGCCACTTAATAAACCACAA 57.151 33.333 0.00 0.00 0.00 3.33
6352 12154 6.686630 TCATGCCACTTAATAAACCACAAAG 58.313 36.000 0.00 0.00 0.00 2.77
6354 12156 6.325919 TGCCACTTAATAAACCACAAAGAG 57.674 37.500 0.00 0.00 0.00 2.85
6355 12157 5.161358 GCCACTTAATAAACCACAAAGAGC 58.839 41.667 0.00 0.00 0.00 4.09
6356 12158 5.278758 GCCACTTAATAAACCACAAAGAGCA 60.279 40.000 0.00 0.00 0.00 4.26
6357 12159 6.381801 CCACTTAATAAACCACAAAGAGCAG 58.618 40.000 0.00 0.00 0.00 4.24
6359 12161 7.078228 CACTTAATAAACCACAAAGAGCAGAC 58.922 38.462 0.00 0.00 0.00 3.51
6361 12163 7.502561 ACTTAATAAACCACAAAGAGCAGACTT 59.497 33.333 0.00 0.00 0.00 3.01
6363 12165 7.817418 AATAAACCACAAAGAGCAGACTTTA 57.183 32.000 0.00 0.00 37.91 1.85
6364 12166 8.409358 AATAAACCACAAAGAGCAGACTTTAT 57.591 30.769 0.00 0.00 37.91 1.40
6366 12168 5.695851 ACCACAAAGAGCAGACTTTATTG 57.304 39.130 0.00 0.00 37.91 1.90
6369 12171 5.471456 CCACAAAGAGCAGACTTTATTGACT 59.529 40.000 0.00 0.00 37.91 3.41
6371 12173 7.074502 CACAAAGAGCAGACTTTATTGACTTC 58.925 38.462 0.00 0.00 37.91 3.01
6372 12174 6.767902 ACAAAGAGCAGACTTTATTGACTTCA 59.232 34.615 0.00 0.00 37.91 3.02
6375 12177 6.529220 AGAGCAGACTTTATTGACTTCACTT 58.471 36.000 0.00 0.00 0.00 3.16
6376 12178 6.995091 AGAGCAGACTTTATTGACTTCACTTT 59.005 34.615 0.00 0.00 0.00 2.66
6378 12180 8.089115 AGCAGACTTTATTGACTTCACTTTAC 57.911 34.615 0.00 0.00 0.00 2.01
6380 12182 9.204570 GCAGACTTTATTGACTTCACTTTACTA 57.795 33.333 0.00 0.00 0.00 1.82
6388 12190 8.594881 ATTGACTTCACTTTACTACTCAACTG 57.405 34.615 0.00 0.00 0.00 3.16
6389 12191 7.108841 TGACTTCACTTTACTACTCAACTGT 57.891 36.000 0.00 0.00 0.00 3.55
6391 12193 7.108841 ACTTCACTTTACTACTCAACTGTGA 57.891 36.000 0.00 0.00 0.00 3.58
6392 12194 7.727181 ACTTCACTTTACTACTCAACTGTGAT 58.273 34.615 0.00 0.00 33.98 3.06
6393 12195 7.653713 ACTTCACTTTACTACTCAACTGTGATG 59.346 37.037 0.00 0.00 33.98 3.07
6394 12196 5.926542 TCACTTTACTACTCAACTGTGATGC 59.073 40.000 0.00 0.00 31.85 3.91
6395 12197 5.928839 CACTTTACTACTCAACTGTGATGCT 59.071 40.000 0.00 0.00 31.85 3.79
6398 12200 3.668447 ACTACTCAACTGTGATGCTTGG 58.332 45.455 0.00 0.00 31.85 3.61
6399 12201 2.645838 ACTCAACTGTGATGCTTGGT 57.354 45.000 0.00 0.00 31.85 3.67
6400 12202 2.936202 ACTCAACTGTGATGCTTGGTT 58.064 42.857 0.00 0.00 31.85 3.67
6401 12203 2.620115 ACTCAACTGTGATGCTTGGTTG 59.380 45.455 0.00 0.00 38.69 3.77
6403 12205 1.338973 CAACTGTGATGCTTGGTTGCT 59.661 47.619 0.00 0.00 32.50 3.91
6404 12206 1.242076 ACTGTGATGCTTGGTTGCTC 58.758 50.000 0.00 0.00 0.00 4.26
6405 12207 0.524862 CTGTGATGCTTGGTTGCTCC 59.475 55.000 0.00 0.00 0.00 4.70
6407 12209 1.350684 TGTGATGCTTGGTTGCTCCTA 59.649 47.619 0.80 0.00 37.07 2.94
6421 12223 2.704572 GCTCCTAGCAAAAGCTCAAGA 58.295 47.619 0.00 0.00 41.89 3.02
6422 12224 3.077359 GCTCCTAGCAAAAGCTCAAGAA 58.923 45.455 0.00 0.00 41.89 2.52
6423 12225 3.120025 GCTCCTAGCAAAAGCTCAAGAAC 60.120 47.826 0.00 0.00 41.89 3.01
6424 12226 4.067896 CTCCTAGCAAAAGCTCAAGAACA 58.932 43.478 0.00 0.00 0.00 3.18
6425 12227 4.460263 TCCTAGCAAAAGCTCAAGAACAA 58.540 39.130 0.00 0.00 0.00 2.83
6426 12228 4.887071 TCCTAGCAAAAGCTCAAGAACAAA 59.113 37.500 0.00 0.00 0.00 2.83
6427 12229 5.536161 TCCTAGCAAAAGCTCAAGAACAAAT 59.464 36.000 0.00 0.00 0.00 2.32
6428 12230 6.040842 TCCTAGCAAAAGCTCAAGAACAAATT 59.959 34.615 0.00 0.00 0.00 1.82
6429 12231 7.230510 TCCTAGCAAAAGCTCAAGAACAAATTA 59.769 33.333 0.00 0.00 0.00 1.40
6430 12232 7.540055 CCTAGCAAAAGCTCAAGAACAAATTAG 59.460 37.037 0.00 0.00 0.00 1.73
6431 12233 7.042797 AGCAAAAGCTCAAGAACAAATTAGA 57.957 32.000 0.00 0.00 0.00 2.10
6432 12234 6.920210 AGCAAAAGCTCAAGAACAAATTAGAC 59.080 34.615 0.00 0.00 0.00 2.59
6433 12235 6.697019 GCAAAAGCTCAAGAACAAATTAGACA 59.303 34.615 0.00 0.00 0.00 3.41
6434 12236 7.222611 GCAAAAGCTCAAGAACAAATTAGACAA 59.777 33.333 0.00 0.00 0.00 3.18
6435 12237 9.252962 CAAAAGCTCAAGAACAAATTAGACAAT 57.747 29.630 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.170116 GAGACTCGAGACCAGCAGTG 59.830 60.000 21.68 0.00 0.00 3.66
6 7 1.302383 CGAGACTCGAGACCAGCAGT 61.302 60.000 21.68 0.00 43.74 4.40
7 8 1.021920 TCGAGACTCGAGACCAGCAG 61.022 60.000 23.27 3.69 44.82 4.24
8 9 1.003718 TCGAGACTCGAGACCAGCA 60.004 57.895 23.27 0.00 44.82 4.41
9 10 3.892122 TCGAGACTCGAGACCAGC 58.108 61.111 23.27 4.75 44.82 4.85
17 18 1.433879 GTGGACCCATCGAGACTCG 59.566 63.158 18.91 18.91 42.10 4.18
18 19 1.030488 TCGTGGACCCATCGAGACTC 61.030 60.000 8.78 0.00 0.00 3.36
19 20 1.001269 TCGTGGACCCATCGAGACT 60.001 57.895 8.78 0.00 0.00 3.24
57 58 0.799534 AGTGGTACGTACGATTGCGC 60.800 55.000 24.41 11.26 42.48 6.09
60 61 1.135199 AGGCAGTGGTACGTACGATTG 60.135 52.381 24.41 22.95 0.00 2.67
63 64 1.588824 CCAGGCAGTGGTACGTACGA 61.589 60.000 24.41 13.07 42.17 3.43
64 65 1.153901 CCAGGCAGTGGTACGTACG 60.154 63.158 18.98 15.01 42.17 3.67
65 66 4.904466 CCAGGCAGTGGTACGTAC 57.096 61.111 17.56 17.56 42.17 3.67
684 696 2.351726 GTGAAGTTTTCTGCGTGACTGT 59.648 45.455 0.00 0.00 0.00 3.55
687 699 3.609103 ATGTGAAGTTTTCTGCGTGAC 57.391 42.857 0.00 0.00 0.00 3.67
688 700 3.183574 CGTATGTGAAGTTTTCTGCGTGA 59.816 43.478 0.00 0.00 0.00 4.35
692 708 3.496884 TGTCCGTATGTGAAGTTTTCTGC 59.503 43.478 0.00 0.00 0.00 4.26
719 735 1.149627 GCACGGGGCCCATACATTA 59.850 57.895 26.86 0.00 36.11 1.90
809 828 2.280186 GGGGTGCTCGCGGATAAG 60.280 66.667 6.13 0.00 0.00 1.73
855 874 2.487428 CAGTGAGACGAGCCGAGG 59.513 66.667 1.50 0.00 0.00 4.63
857 876 4.103103 CGCAGTGAGACGAGCCGA 62.103 66.667 0.00 0.00 0.00 5.54
859 878 4.427661 AGCGCAGTGAGACGAGCC 62.428 66.667 11.47 0.00 0.00 4.70
861 880 3.177920 GCAGCGCAGTGAGACGAG 61.178 66.667 11.47 0.00 0.00 4.18
925 954 2.835431 CGAGGCGAGAGATGGGGT 60.835 66.667 0.00 0.00 0.00 4.95
986 1031 2.981302 CCATGCTGGAGACGGTCA 59.019 61.111 11.27 0.00 40.96 4.02
1148 1193 2.037527 ACCACCTCTCCTCGTCCC 59.962 66.667 0.00 0.00 0.00 4.46
1429 1977 0.036952 ATCCTCAGACCACGCAACAG 60.037 55.000 0.00 0.00 0.00 3.16
1515 2063 2.226330 TGAAATGAAACCACAGGACCG 58.774 47.619 0.00 0.00 0.00 4.79
1528 2076 2.689471 CCGCCTGAAATGGATGAAATGA 59.311 45.455 0.00 0.00 0.00 2.57
1550 2098 0.752009 TGCTAGTACTGGCGAGGAGG 60.752 60.000 24.04 0.00 40.17 4.30
1583 2134 1.406180 TCATTCCCGCAATTGCATCTG 59.594 47.619 28.77 17.34 42.21 2.90
1723 2274 6.572119 GCATCTGAAGATATCACTAGTCCCAG 60.572 46.154 5.32 0.00 33.47 4.45
1852 2407 7.785028 TGGTCCTACAATCTCACTGTATAGATT 59.215 37.037 10.26 10.26 41.92 2.40
1853 2408 7.298374 TGGTCCTACAATCTCACTGTATAGAT 58.702 38.462 0.00 0.33 33.87 1.98
1854 2409 6.669631 TGGTCCTACAATCTCACTGTATAGA 58.330 40.000 0.00 0.00 0.00 1.98
1855 2410 6.961360 TGGTCCTACAATCTCACTGTATAG 57.039 41.667 0.00 0.00 0.00 1.31
1856 2411 6.895756 ACTTGGTCCTACAATCTCACTGTATA 59.104 38.462 0.00 0.00 0.00 1.47
1857 2412 5.721960 ACTTGGTCCTACAATCTCACTGTAT 59.278 40.000 0.00 0.00 0.00 2.29
1858 2413 5.084519 ACTTGGTCCTACAATCTCACTGTA 58.915 41.667 0.00 0.00 0.00 2.74
1859 2414 3.904339 ACTTGGTCCTACAATCTCACTGT 59.096 43.478 0.00 0.00 0.00 3.55
1936 2491 4.107622 GCCTGAATCAAATCCAATTGTCG 58.892 43.478 4.43 0.00 0.00 4.35
1940 2496 5.767277 AAAGGCCTGAATCAAATCCAATT 57.233 34.783 5.69 0.00 0.00 2.32
1945 2501 6.406288 CCCTAGAAAAAGGCCTGAATCAAATC 60.406 42.308 5.69 0.00 35.09 2.17
1947 2503 4.772100 CCCTAGAAAAAGGCCTGAATCAAA 59.228 41.667 5.69 0.00 35.09 2.69
1949 2505 3.309121 CCCCTAGAAAAAGGCCTGAATCA 60.309 47.826 5.69 0.00 35.09 2.57
1955 2511 2.371391 TACCCCCTAGAAAAAGGCCT 57.629 50.000 0.00 0.00 35.09 5.19
1956 2512 3.682592 ATTACCCCCTAGAAAAAGGCC 57.317 47.619 0.00 0.00 35.09 5.19
1968 2524 8.879427 AGCTTTTACATATCATTATTACCCCC 57.121 34.615 0.00 0.00 0.00 5.40
1984 2949 9.457436 CCCCTAAATAGAAGTAAAGCTTTTACA 57.543 33.333 18.47 0.00 37.59 2.41
1985 2950 8.404000 GCCCCTAAATAGAAGTAAAGCTTTTAC 58.596 37.037 18.47 12.89 37.59 2.01
1995 2960 9.839185 ATTATACAGAGCCCCTAAATAGAAGTA 57.161 33.333 0.00 0.00 0.00 2.24
2159 3127 6.745116 AGTTATAAACACAAAGGAGCCAAAC 58.255 36.000 0.00 0.00 0.00 2.93
2253 3304 1.003233 ACTAGGCAGTTTGGCACTACC 59.997 52.381 5.41 0.00 46.46 3.18
2258 3309 3.945285 GCTTATTACTAGGCAGTTTGGCA 59.055 43.478 5.41 0.00 46.46 4.92
2285 3336 7.218614 TGAAAAAGACGGATACTTGTCCTTTA 58.781 34.615 0.00 0.00 36.07 1.85
2362 3634 9.096823 TCGAGGTACCTACATTATTTTCCATAT 57.903 33.333 16.29 0.00 0.00 1.78
2381 3653 4.033587 GTGCGCATTTCTTATTTCGAGGTA 59.966 41.667 15.91 0.00 0.00 3.08
2382 3654 3.006940 TGCGCATTTCTTATTTCGAGGT 58.993 40.909 5.66 0.00 0.00 3.85
2383 3655 3.181511 TGTGCGCATTTCTTATTTCGAGG 60.182 43.478 15.91 0.00 0.00 4.63
2385 3657 3.723542 CGTGTGCGCATTTCTTATTTCGA 60.724 43.478 15.91 0.00 0.00 3.71
2386 3658 2.521933 CGTGTGCGCATTTCTTATTTCG 59.478 45.455 15.91 3.05 0.00 3.46
2387 3659 3.742786 TCGTGTGCGCATTTCTTATTTC 58.257 40.909 15.91 0.00 38.14 2.17
2388 3660 3.188460 ACTCGTGTGCGCATTTCTTATTT 59.812 39.130 15.91 0.00 38.14 1.40
2390 3662 2.346803 ACTCGTGTGCGCATTTCTTAT 58.653 42.857 15.91 0.00 38.14 1.73
2391 3663 1.790755 ACTCGTGTGCGCATTTCTTA 58.209 45.000 15.91 0.00 38.14 2.10
2392 3664 1.790755 TACTCGTGTGCGCATTTCTT 58.209 45.000 15.91 0.00 38.14 2.52
2395 3667 1.222300 TGTTACTCGTGTGCGCATTT 58.778 45.000 15.91 0.00 38.14 2.32
2396 3668 1.070175 GTTGTTACTCGTGTGCGCATT 60.070 47.619 15.91 0.00 38.14 3.56
2397 3669 0.511221 GTTGTTACTCGTGTGCGCAT 59.489 50.000 15.91 0.00 38.14 4.73
2398 3670 1.813212 CGTTGTTACTCGTGTGCGCA 61.813 55.000 5.66 5.66 38.14 6.09
2399 3671 1.154908 CGTTGTTACTCGTGTGCGC 60.155 57.895 0.00 0.00 38.14 6.09
2400 3672 0.573521 AACGTTGTTACTCGTGTGCG 59.426 50.000 0.00 0.54 40.19 5.34
2401 3673 1.914257 GCAACGTTGTTACTCGTGTGC 60.914 52.381 27.78 7.41 40.19 4.57
2402 3674 1.332552 GGCAACGTTGTTACTCGTGTG 60.333 52.381 27.78 0.41 40.19 3.82
2403 3675 0.932399 GGCAACGTTGTTACTCGTGT 59.068 50.000 27.78 0.00 40.19 4.49
2404 3676 1.070843 CAGGCAACGTTGTTACTCGTG 60.071 52.381 27.78 17.82 46.39 4.35
2405 3677 1.214367 CAGGCAACGTTGTTACTCGT 58.786 50.000 27.78 10.69 46.39 4.18
2407 3679 1.194772 GAGCAGGCAACGTTGTTACTC 59.805 52.381 27.78 22.83 46.39 2.59
2408 3680 1.202651 AGAGCAGGCAACGTTGTTACT 60.203 47.619 27.78 20.11 46.39 2.24
2409 3681 1.194772 GAGAGCAGGCAACGTTGTTAC 59.805 52.381 27.78 18.36 46.39 2.50
2453 3725 6.388278 ACTGTACTCTGGTAAAAAGATCGTC 58.612 40.000 0.00 0.00 0.00 4.20
2454 3726 6.208994 AGACTGTACTCTGGTAAAAAGATCGT 59.791 38.462 0.00 0.00 0.00 3.73
2504 3776 8.846943 ATGTATATGTTGTGACTGAGTGAAAA 57.153 30.769 0.00 0.00 0.00 2.29
2508 3780 7.463251 CGTGAATGTATATGTTGTGACTGAGTG 60.463 40.741 0.00 0.00 0.00 3.51
3118 4390 5.273208 TCTCAGTCCCTAATCTGCTTTAGT 58.727 41.667 0.00 0.00 0.00 2.24
3129 4401 2.567615 GTGGCTTCTTCTCAGTCCCTAA 59.432 50.000 0.00 0.00 0.00 2.69
3150 4422 2.279582 AGAATGACACGGACTAAGCG 57.720 50.000 0.00 0.00 0.00 4.68
3187 4459 2.047002 TGTCCATGCCATCATGTGAG 57.953 50.000 4.80 0.00 46.64 3.51
3249 4521 2.758423 GTGGGGTGGTTAATCATTGTCC 59.242 50.000 0.00 0.00 0.00 4.02
3267 4539 1.616159 AAGGTCAAATGAACCGGTGG 58.384 50.000 8.52 0.00 30.36 4.61
3347 4620 8.031864 CACCATGTAATTTAACAGTGCCATAAA 58.968 33.333 0.00 0.00 31.70 1.40
3384 4821 1.213678 CCTCAAATCCCAGAGGCATCA 59.786 52.381 0.00 0.00 44.37 3.07
3453 4890 7.514721 ACAGATGAGGAAAAGTAGGTTGTTTA 58.485 34.615 0.00 0.00 0.00 2.01
3460 4897 8.792830 TCAAAATACAGATGAGGAAAAGTAGG 57.207 34.615 0.00 0.00 0.00 3.18
3464 4901 8.866956 GCAAATCAAAATACAGATGAGGAAAAG 58.133 33.333 0.00 0.00 0.00 2.27
3557 5001 4.472833 AGATAAGTCTGCATGGAGGAAACT 59.527 41.667 14.84 7.78 36.88 2.66
3811 5340 7.362401 CCAATCAGCTAGCAAAACTGAAGTTAT 60.362 37.037 18.83 0.00 43.23 1.89
3847 5376 7.783042 ACCTACTTTGTAATCCAGTAGTCATC 58.217 38.462 5.17 0.00 38.84 2.92
3871 5400 9.159470 CTCACTTGAAACTTAATCGAAAAAGAC 57.841 33.333 14.90 7.84 0.00 3.01
3968 5498 2.234613 ACGAACACGTCAGCAATGG 58.765 52.632 0.00 0.00 35.22 3.16
3985 5515 8.547967 TGAGACAGTAATAAGATTGTTTGGAC 57.452 34.615 0.00 0.00 0.00 4.02
4040 5575 5.552870 AACTACCAGAAACTGACAGATGT 57.447 39.130 10.08 0.00 32.44 3.06
4070 5605 9.186323 CACTTATGCACAGAATAGTACATACTC 57.814 37.037 1.67 0.00 37.73 2.59
4146 5681 6.529477 GCAGAAAAACATAAAGCAGATTCCTC 59.471 38.462 0.00 0.00 0.00 3.71
4163 5699 6.436847 TGAATCCAACATGATAGGCAGAAAAA 59.563 34.615 0.00 0.00 0.00 1.94
4287 5823 8.402472 TCTTTTGATTCAAATGTTCTAACACGT 58.598 29.630 18.93 0.00 42.51 4.49
4288 5824 8.781067 TCTTTTGATTCAAATGTTCTAACACG 57.219 30.769 18.93 0.00 42.51 4.49
4290 5826 9.748708 CCTTCTTTTGATTCAAATGTTCTAACA 57.251 29.630 18.93 0.00 44.06 2.41
4291 5827 9.965824 TCCTTCTTTTGATTCAAATGTTCTAAC 57.034 29.630 18.93 0.00 33.19 2.34
4337 5873 7.373493 CAAGACAGAACTTTATTTTGGCAGAT 58.627 34.615 0.00 0.00 0.00 2.90
4455 5992 2.124445 CCTAGCAGCATGGCAGCA 60.124 61.111 8.29 0.00 43.44 4.41
4683 6712 3.732212 AGCTTTGGTTGGCTTCAAAATC 58.268 40.909 0.00 0.00 34.96 2.17
4771 6800 5.650703 AGCGCCAAAATACTTGGTACTTATT 59.349 36.000 2.29 0.00 41.53 1.40
4875 6905 3.181485 GGAAGTCCGATCTAGAAGTGTGG 60.181 52.174 0.00 0.00 0.00 4.17
4926 6956 1.418342 CGCCGTCGTATGGTTTCTGG 61.418 60.000 0.00 0.00 0.00 3.86
5073 7737 3.944015 GGATACTGCAGTGCATTCTTCTT 59.056 43.478 29.57 0.00 38.13 2.52
5531 8457 2.561733 TGCGAGTACAGTATCACAGC 57.438 50.000 0.00 0.00 0.00 4.40
5671 8597 1.535204 AAACGGCATTGGAGCAAGGG 61.535 55.000 0.00 0.00 35.83 3.95
5709 8635 2.551721 CCAGACCATGTCAAGCTTCTGT 60.552 50.000 0.00 0.00 34.60 3.41
5710 8636 2.082231 CCAGACCATGTCAAGCTTCTG 58.918 52.381 0.00 0.00 34.60 3.02
5711 8637 1.004044 CCCAGACCATGTCAAGCTTCT 59.996 52.381 0.00 0.00 34.60 2.85
5712 8638 1.457346 CCCAGACCATGTCAAGCTTC 58.543 55.000 0.00 0.00 34.60 3.86
5713 8639 0.038744 CCCCAGACCATGTCAAGCTT 59.961 55.000 0.00 0.00 34.60 3.74
5714 8640 1.687612 CCCCAGACCATGTCAAGCT 59.312 57.895 0.00 0.00 34.60 3.74
5715 8641 2.048603 GCCCCAGACCATGTCAAGC 61.049 63.158 0.00 0.00 34.60 4.01
5716 8642 0.679002 CAGCCCCAGACCATGTCAAG 60.679 60.000 0.00 0.00 34.60 3.02
5717 8643 1.379916 CAGCCCCAGACCATGTCAA 59.620 57.895 0.00 0.00 34.60 3.18
5718 8644 3.080641 CAGCCCCAGACCATGTCA 58.919 61.111 0.00 0.00 34.60 3.58
5719 8645 1.626356 TAGCAGCCCCAGACCATGTC 61.626 60.000 0.00 0.00 0.00 3.06
5727 8665 1.225426 TGCAGATTAGCAGCCCCAG 59.775 57.895 0.00 0.00 40.11 4.45
5778 8716 1.339727 ACGGCATTGGAGGAAGGTAAC 60.340 52.381 0.00 0.00 0.00 2.50
5800 8738 3.655615 AAGGGATACATTGCCGGTAAA 57.344 42.857 9.67 0.94 40.46 2.01
5881 8822 0.036164 TGCCATCGTTTGCACCTACT 59.964 50.000 0.00 0.00 31.31 2.57
5886 8830 0.523072 ACTCATGCCATCGTTTGCAC 59.477 50.000 0.00 0.00 40.88 4.57
5897 8841 2.863704 GCTGGTGTTTTTCACTCATGCC 60.864 50.000 0.00 0.00 45.50 4.40
5904 8848 3.179048 GTGAGTTGCTGGTGTTTTTCAC 58.821 45.455 0.00 0.00 45.47 3.18
5911 8855 1.152963 GGTGGTGAGTTGCTGGTGT 60.153 57.895 0.00 0.00 0.00 4.16
5934 8878 5.321102 TGTACTACTGCATCCATTTTGGTT 58.679 37.500 0.00 0.00 39.03 3.67
5938 8882 6.658849 TGGTATGTACTACTGCATCCATTTT 58.341 36.000 0.00 0.00 0.00 1.82
5951 8895 3.797039 ACGCTCGTACTGGTATGTACTA 58.203 45.455 0.00 0.00 40.25 1.82
5952 8896 2.636830 ACGCTCGTACTGGTATGTACT 58.363 47.619 0.00 0.00 40.25 2.73
5953 8897 3.411415 AACGCTCGTACTGGTATGTAC 57.589 47.619 0.00 0.00 39.35 2.90
5954 8898 4.815846 TCATAACGCTCGTACTGGTATGTA 59.184 41.667 0.00 0.00 0.00 2.29
5956 8900 4.219143 TCATAACGCTCGTACTGGTATG 57.781 45.455 0.00 0.57 0.00 2.39
5958 8902 4.906065 AATCATAACGCTCGTACTGGTA 57.094 40.909 0.00 0.00 0.00 3.25
5959 8903 3.795623 AATCATAACGCTCGTACTGGT 57.204 42.857 0.00 0.00 0.00 4.00
5960 8904 4.328983 ACAAAATCATAACGCTCGTACTGG 59.671 41.667 0.00 0.00 0.00 4.00
5961 8905 5.450376 ACAAAATCATAACGCTCGTACTG 57.550 39.130 0.00 0.00 0.00 2.74
5962 8906 7.766219 AATACAAAATCATAACGCTCGTACT 57.234 32.000 0.00 0.00 0.00 2.73
5963 8907 9.564041 CTAAATACAAAATCATAACGCTCGTAC 57.436 33.333 0.00 0.00 0.00 3.67
5966 8910 9.564041 GTACTAAATACAAAATCATAACGCTCG 57.436 33.333 0.00 0.00 33.54 5.03
5977 8921 9.819267 GCCTCTAGTCTGTACTAAATACAAAAT 57.181 33.333 0.00 0.00 43.35 1.82
5979 8923 8.357290 TGCCTCTAGTCTGTACTAAATACAAA 57.643 34.615 0.00 0.00 43.35 2.83
5980 8924 7.949690 TGCCTCTAGTCTGTACTAAATACAA 57.050 36.000 0.00 0.00 43.35 2.41
5981 8925 9.064706 GTATGCCTCTAGTCTGTACTAAATACA 57.935 37.037 0.00 0.00 41.71 2.29
5982 8926 8.229137 CGTATGCCTCTAGTCTGTACTAAATAC 58.771 40.741 0.00 0.00 37.75 1.89
5983 8927 7.094890 GCGTATGCCTCTAGTCTGTACTAAATA 60.095 40.741 0.00 0.00 34.74 1.40
5984 8928 6.294065 GCGTATGCCTCTAGTCTGTACTAAAT 60.294 42.308 0.00 0.00 34.74 1.40
5986 8930 4.514441 GCGTATGCCTCTAGTCTGTACTAA 59.486 45.833 0.00 0.00 34.74 2.24
5988 8932 2.879646 GCGTATGCCTCTAGTCTGTACT 59.120 50.000 0.00 0.00 35.85 2.73
5989 8933 3.270962 GCGTATGCCTCTAGTCTGTAC 57.729 52.381 0.00 0.00 33.98 2.90
6002 8946 0.238817 TTTGACCAAACGGCGTATGC 59.761 50.000 15.20 0.00 41.71 3.14
6003 8947 2.690173 TTTTGACCAAACGGCGTATG 57.310 45.000 15.20 7.45 0.00 2.39
6004 8948 3.253677 TGATTTTTGACCAAACGGCGTAT 59.746 39.130 15.20 0.00 0.00 3.06
6005 8949 2.617308 TGATTTTTGACCAAACGGCGTA 59.383 40.909 15.20 0.00 0.00 4.42
6006 8950 1.405821 TGATTTTTGACCAAACGGCGT 59.594 42.857 6.77 6.77 0.00 5.68
6009 8953 5.007528 AGCATTTTGATTTTTGACCAAACGG 59.992 36.000 0.00 0.00 30.55 4.44
6011 8955 6.692249 CCAAGCATTTTGATTTTTGACCAAAC 59.308 34.615 0.00 0.00 30.55 2.93
6012 8956 6.183360 CCCAAGCATTTTGATTTTTGACCAAA 60.183 34.615 0.00 0.00 0.00 3.28
6014 8958 4.820716 CCCAAGCATTTTGATTTTTGACCA 59.179 37.500 0.00 0.00 0.00 4.02
6015 8959 4.320421 GCCCAAGCATTTTGATTTTTGACC 60.320 41.667 0.00 0.00 39.53 4.02
6016 8960 4.516321 AGCCCAAGCATTTTGATTTTTGAC 59.484 37.500 0.00 0.00 43.56 3.18
6017 8961 4.716794 AGCCCAAGCATTTTGATTTTTGA 58.283 34.783 0.00 0.00 43.56 2.69
6018 8962 5.008811 TCAAGCCCAAGCATTTTGATTTTTG 59.991 36.000 0.00 0.00 43.56 2.44
6019 8963 5.131784 TCAAGCCCAAGCATTTTGATTTTT 58.868 33.333 0.00 0.00 43.56 1.94
6020 8964 4.716794 TCAAGCCCAAGCATTTTGATTTT 58.283 34.783 0.00 0.00 43.56 1.82
6021 8965 4.354893 TCAAGCCCAAGCATTTTGATTT 57.645 36.364 0.00 0.00 43.56 2.17
6022 8966 4.563140 ATCAAGCCCAAGCATTTTGATT 57.437 36.364 0.00 0.00 37.87 2.57
6023 8967 4.258543 CAATCAAGCCCAAGCATTTTGAT 58.741 39.130 0.00 0.00 40.94 2.57
6025 8969 3.404899 ACAATCAAGCCCAAGCATTTTG 58.595 40.909 0.00 0.00 43.56 2.44
6026 8970 3.775261 ACAATCAAGCCCAAGCATTTT 57.225 38.095 0.00 0.00 43.56 1.82
6027 8971 3.775261 AACAATCAAGCCCAAGCATTT 57.225 38.095 0.00 0.00 43.56 2.32
6028 8972 3.404899 CAAACAATCAAGCCCAAGCATT 58.595 40.909 0.00 0.00 43.56 3.56
6029 8973 2.289819 CCAAACAATCAAGCCCAAGCAT 60.290 45.455 0.00 0.00 43.56 3.79
6030 8974 1.070445 CCAAACAATCAAGCCCAAGCA 59.930 47.619 0.00 0.00 43.56 3.91
6031 8975 1.070601 ACCAAACAATCAAGCCCAAGC 59.929 47.619 0.00 0.00 40.32 4.01
6032 8976 3.473923 AACCAAACAATCAAGCCCAAG 57.526 42.857 0.00 0.00 0.00 3.61
6033 8977 3.922171 AAACCAAACAATCAAGCCCAA 57.078 38.095 0.00 0.00 0.00 4.12
6034 8978 3.706594 TGTAAACCAAACAATCAAGCCCA 59.293 39.130 0.00 0.00 0.00 5.36
6037 11839 3.740832 GCCTGTAAACCAAACAATCAAGC 59.259 43.478 0.00 0.00 0.00 4.01
6040 11842 3.300388 TGGCCTGTAAACCAAACAATCA 58.700 40.909 3.32 0.00 31.46 2.57
6042 11844 4.972751 AATGGCCTGTAAACCAAACAAT 57.027 36.364 3.32 0.00 39.96 2.71
6060 11862 3.568538 CAAAAGAACGAGAGCCCAAATG 58.431 45.455 0.00 0.00 0.00 2.32
6062 11864 1.953686 CCAAAAGAACGAGAGCCCAAA 59.046 47.619 0.00 0.00 0.00 3.28
6065 11867 0.875059 CACCAAAAGAACGAGAGCCC 59.125 55.000 0.00 0.00 0.00 5.19
6068 11870 6.363473 GTTTATGACACCAAAAGAACGAGAG 58.637 40.000 0.00 0.00 0.00 3.20
6074 11876 6.546428 TTTGGGTTTATGACACCAAAAGAA 57.454 33.333 5.34 0.00 41.48 2.52
6076 11878 6.109359 TGTTTTGGGTTTATGACACCAAAAG 58.891 36.000 17.71 0.00 46.85 2.27
6077 11879 6.049955 TGTTTTGGGTTTATGACACCAAAA 57.950 33.333 14.40 14.40 45.66 2.44
6078 11880 5.677319 TGTTTTGGGTTTATGACACCAAA 57.323 34.783 3.79 3.79 42.10 3.28
6079 11881 5.878406 ATGTTTTGGGTTTATGACACCAA 57.122 34.783 0.00 0.00 37.03 3.67
6080 11882 5.047660 GCTATGTTTTGGGTTTATGACACCA 60.048 40.000 0.00 0.00 35.80 4.17
6081 11883 5.047660 TGCTATGTTTTGGGTTTATGACACC 60.048 40.000 0.00 0.00 0.00 4.16
6083 11885 6.656632 TTGCTATGTTTTGGGTTTATGACA 57.343 33.333 0.00 0.00 0.00 3.58
6084 11886 5.576774 GCTTGCTATGTTTTGGGTTTATGAC 59.423 40.000 0.00 0.00 0.00 3.06
6085 11887 5.244851 TGCTTGCTATGTTTTGGGTTTATGA 59.755 36.000 0.00 0.00 0.00 2.15
6086 11888 5.477510 TGCTTGCTATGTTTTGGGTTTATG 58.522 37.500 0.00 0.00 0.00 1.90
6087 11889 5.736951 TGCTTGCTATGTTTTGGGTTTAT 57.263 34.783 0.00 0.00 0.00 1.40
6088 11890 5.537300 TTGCTTGCTATGTTTTGGGTTTA 57.463 34.783 0.00 0.00 0.00 2.01
6089 11891 4.414337 TTGCTTGCTATGTTTTGGGTTT 57.586 36.364 0.00 0.00 0.00 3.27
6090 11892 4.622260 ATTGCTTGCTATGTTTTGGGTT 57.378 36.364 0.00 0.00 0.00 4.11
6104 11906 0.971386 AAGGTCCCTGCAATTGCTTG 59.029 50.000 29.37 21.04 42.66 4.01
6106 11908 2.025037 TCATAAGGTCCCTGCAATTGCT 60.025 45.455 29.37 10.59 42.66 3.91
6108 11910 4.220382 TGTTTCATAAGGTCCCTGCAATTG 59.780 41.667 0.00 0.00 0.00 2.32
6110 11912 4.046286 TGTTTCATAAGGTCCCTGCAAT 57.954 40.909 0.00 0.00 0.00 3.56
6112 11914 3.620488 GATGTTTCATAAGGTCCCTGCA 58.380 45.455 0.00 0.00 0.00 4.41
6113 11915 2.952310 GGATGTTTCATAAGGTCCCTGC 59.048 50.000 0.00 0.00 0.00 4.85
6114 11916 3.947834 GTGGATGTTTCATAAGGTCCCTG 59.052 47.826 0.00 0.00 0.00 4.45
6115 11917 3.852578 AGTGGATGTTTCATAAGGTCCCT 59.147 43.478 0.00 0.00 0.00 4.20
6116 11918 3.947834 CAGTGGATGTTTCATAAGGTCCC 59.052 47.826 0.00 0.00 0.00 4.46
6117 11919 4.843728 TCAGTGGATGTTTCATAAGGTCC 58.156 43.478 0.00 0.00 0.00 4.46
6118 11920 5.940470 ACTTCAGTGGATGTTTCATAAGGTC 59.060 40.000 0.00 0.00 0.00 3.85
6120 11922 6.430925 TCAACTTCAGTGGATGTTTCATAAGG 59.569 38.462 0.00 0.00 38.82 2.69
6121 11923 7.439157 TCAACTTCAGTGGATGTTTCATAAG 57.561 36.000 0.00 0.00 38.82 1.73
6123 11925 5.412594 GCTCAACTTCAGTGGATGTTTCATA 59.587 40.000 0.00 0.00 38.82 2.15
6124 11926 4.217118 GCTCAACTTCAGTGGATGTTTCAT 59.783 41.667 0.00 0.00 38.82 2.57
6126 11928 3.817647 AGCTCAACTTCAGTGGATGTTTC 59.182 43.478 0.00 0.00 38.82 2.78
6127 11929 3.567164 CAGCTCAACTTCAGTGGATGTTT 59.433 43.478 0.00 0.00 38.82 2.83
6128 11930 3.144506 CAGCTCAACTTCAGTGGATGTT 58.855 45.455 0.00 0.00 40.77 2.71
6130 11932 3.049708 TCAGCTCAACTTCAGTGGATG 57.950 47.619 0.00 0.00 0.00 3.51
6131 11933 3.777106 TTCAGCTCAACTTCAGTGGAT 57.223 42.857 0.00 0.00 0.00 3.41
6132 11934 3.777106 ATTCAGCTCAACTTCAGTGGA 57.223 42.857 0.00 0.00 0.00 4.02
6133 11935 4.142730 GCTTATTCAGCTCAACTTCAGTGG 60.143 45.833 0.00 0.00 46.27 4.00
6135 11937 8.600665 AAGTTGCTTATTCAGCTCAACTTCAGT 61.601 37.037 17.17 1.55 45.22 3.41
6136 11938 6.293845 AAGTTGCTTATTCAGCTCAACTTCAG 60.294 38.462 17.17 0.00 45.22 3.02
6137 11939 5.532406 AAGTTGCTTATTCAGCTCAACTTCA 59.468 36.000 17.17 0.00 45.22 3.02
6138 11940 5.855395 CAAGTTGCTTATTCAGCTCAACTTC 59.145 40.000 19.08 0.00 45.22 3.01
6147 11949 6.088824 GTGGACATTCAAGTTGCTTATTCAG 58.911 40.000 0.00 0.00 0.00 3.02
6148 11950 5.534278 TGTGGACATTCAAGTTGCTTATTCA 59.466 36.000 0.00 0.00 0.00 2.57
6149 11951 6.012658 TGTGGACATTCAAGTTGCTTATTC 57.987 37.500 0.00 0.00 0.00 1.75
6150 11952 6.594788 ATGTGGACATTCAAGTTGCTTATT 57.405 33.333 0.00 0.00 31.37 1.40
6151 11953 6.658816 TGTATGTGGACATTCAAGTTGCTTAT 59.341 34.615 0.00 0.00 37.76 1.73
6153 11955 4.826733 TGTATGTGGACATTCAAGTTGCTT 59.173 37.500 0.00 0.00 37.76 3.91
6154 11956 4.397420 TGTATGTGGACATTCAAGTTGCT 58.603 39.130 0.00 0.00 37.76 3.91
6156 11958 7.815641 TGTTATGTATGTGGACATTCAAGTTG 58.184 34.615 3.56 0.00 40.54 3.16
6157 11959 7.882791 TCTGTTATGTATGTGGACATTCAAGTT 59.117 33.333 3.56 0.00 40.54 2.66
6158 11960 7.394016 TCTGTTATGTATGTGGACATTCAAGT 58.606 34.615 3.56 0.00 40.54 3.16
6159 11961 7.848223 TCTGTTATGTATGTGGACATTCAAG 57.152 36.000 3.56 0.00 40.54 3.02
6161 11963 7.663493 TGTTTCTGTTATGTATGTGGACATTCA 59.337 33.333 0.00 0.00 40.54 2.57
6164 11966 7.828717 TCATGTTTCTGTTATGTATGTGGACAT 59.171 33.333 0.00 0.00 42.68 3.06
6165 11967 7.119116 GTCATGTTTCTGTTATGTATGTGGACA 59.881 37.037 0.00 0.00 0.00 4.02
6166 11968 7.119116 TGTCATGTTTCTGTTATGTATGTGGAC 59.881 37.037 0.00 0.00 0.00 4.02
6167 11969 7.164803 TGTCATGTTTCTGTTATGTATGTGGA 58.835 34.615 0.00 0.00 0.00 4.02
6168 11970 7.376435 TGTCATGTTTCTGTTATGTATGTGG 57.624 36.000 0.00 0.00 0.00 4.17
6169 11971 9.920826 GTATGTCATGTTTCTGTTATGTATGTG 57.079 33.333 0.00 0.00 0.00 3.21
6170 11972 9.665719 TGTATGTCATGTTTCTGTTATGTATGT 57.334 29.630 0.00 0.00 0.00 2.29
6178 11980 9.587772 GTACTCTATGTATGTCATGTTTCTGTT 57.412 33.333 0.00 0.00 37.91 3.16
6180 11982 9.025020 GTGTACTCTATGTATGTCATGTTTCTG 57.975 37.037 0.00 0.00 37.91 3.02
6181 11983 8.972127 AGTGTACTCTATGTATGTCATGTTTCT 58.028 33.333 0.00 0.00 37.91 2.52
6182 11984 9.025020 CAGTGTACTCTATGTATGTCATGTTTC 57.975 37.037 0.00 0.00 37.91 2.78
6183 11985 8.749354 TCAGTGTACTCTATGTATGTCATGTTT 58.251 33.333 0.00 0.00 37.91 2.83
6184 11986 8.293699 TCAGTGTACTCTATGTATGTCATGTT 57.706 34.615 0.00 0.00 37.91 2.71
6185 11987 7.881775 TCAGTGTACTCTATGTATGTCATGT 57.118 36.000 0.00 0.00 37.91 3.21
6186 11988 9.755804 ATTTCAGTGTACTCTATGTATGTCATG 57.244 33.333 0.00 0.00 37.91 3.07
6198 12000 7.952671 TGTGTCTCTTAATTTCAGTGTACTCT 58.047 34.615 0.00 0.00 0.00 3.24
6199 12001 8.764524 ATGTGTCTCTTAATTTCAGTGTACTC 57.235 34.615 0.00 0.00 0.00 2.59
6201 12003 8.584600 CGTATGTGTCTCTTAATTTCAGTGTAC 58.415 37.037 0.00 0.00 0.00 2.90
6202 12004 8.517056 TCGTATGTGTCTCTTAATTTCAGTGTA 58.483 33.333 0.00 0.00 0.00 2.90
6203 12005 7.375834 TCGTATGTGTCTCTTAATTTCAGTGT 58.624 34.615 0.00 0.00 0.00 3.55
6204 12006 7.812309 TCGTATGTGTCTCTTAATTTCAGTG 57.188 36.000 0.00 0.00 0.00 3.66
6211 12013 9.737427 CAAGACTTATCGTATGTGTCTCTTAAT 57.263 33.333 0.00 0.00 37.05 1.40
6212 12014 7.701078 GCAAGACTTATCGTATGTGTCTCTTAA 59.299 37.037 0.00 0.00 37.05 1.85
6214 12016 6.037098 GCAAGACTTATCGTATGTGTCTCTT 58.963 40.000 0.00 0.00 37.05 2.85
6215 12017 5.450688 GGCAAGACTTATCGTATGTGTCTCT 60.451 44.000 0.00 0.00 37.05 3.10
6216 12018 4.740695 GGCAAGACTTATCGTATGTGTCTC 59.259 45.833 0.00 0.00 37.05 3.36
6217 12019 4.159693 TGGCAAGACTTATCGTATGTGTCT 59.840 41.667 0.00 0.00 39.35 3.41
6218 12020 4.267928 GTGGCAAGACTTATCGTATGTGTC 59.732 45.833 0.00 0.00 0.00 3.67
6219 12021 4.181578 GTGGCAAGACTTATCGTATGTGT 58.818 43.478 0.00 0.00 0.00 3.72
6220 12022 4.180817 TGTGGCAAGACTTATCGTATGTG 58.819 43.478 0.00 0.00 0.00 3.21
6221 12023 4.465632 TGTGGCAAGACTTATCGTATGT 57.534 40.909 0.00 0.00 0.00 2.29
6222 12024 4.870426 AGTTGTGGCAAGACTTATCGTATG 59.130 41.667 0.00 0.00 0.00 2.39
6223 12025 5.086104 AGTTGTGGCAAGACTTATCGTAT 57.914 39.130 0.00 0.00 0.00 3.06
6224 12026 4.021807 TGAGTTGTGGCAAGACTTATCGTA 60.022 41.667 5.61 0.00 0.00 3.43
6226 12028 3.325870 TGAGTTGTGGCAAGACTTATCG 58.674 45.455 5.61 0.00 0.00 2.92
6227 12029 6.183360 GGTTATGAGTTGTGGCAAGACTTATC 60.183 42.308 10.66 1.38 0.00 1.75
6228 12030 5.648092 GGTTATGAGTTGTGGCAAGACTTAT 59.352 40.000 11.65 11.65 0.00 1.73
6230 12032 3.821033 GGTTATGAGTTGTGGCAAGACTT 59.179 43.478 5.61 0.00 0.00 3.01
6231 12033 3.181445 TGGTTATGAGTTGTGGCAAGACT 60.181 43.478 3.91 3.91 0.00 3.24
6232 12034 3.146066 TGGTTATGAGTTGTGGCAAGAC 58.854 45.455 0.00 0.00 0.00 3.01
6233 12035 3.500448 TGGTTATGAGTTGTGGCAAGA 57.500 42.857 0.00 0.00 0.00 3.02
6235 12037 4.013728 GGTATGGTTATGAGTTGTGGCAA 58.986 43.478 0.00 0.00 0.00 4.52
6236 12038 3.009584 TGGTATGGTTATGAGTTGTGGCA 59.990 43.478 0.00 0.00 0.00 4.92
6237 12039 3.616219 TGGTATGGTTATGAGTTGTGGC 58.384 45.455 0.00 0.00 0.00 5.01
6238 12040 4.199310 CCTGGTATGGTTATGAGTTGTGG 58.801 47.826 0.00 0.00 0.00 4.17
6239 12041 4.635765 CACCTGGTATGGTTATGAGTTGTG 59.364 45.833 0.00 0.00 38.45 3.33
6240 12042 4.843728 CACCTGGTATGGTTATGAGTTGT 58.156 43.478 0.00 0.00 38.45 3.32
6242 12044 3.265737 TGCACCTGGTATGGTTATGAGTT 59.734 43.478 0.00 0.00 38.45 3.01
6243 12045 2.843730 TGCACCTGGTATGGTTATGAGT 59.156 45.455 0.00 0.00 38.45 3.41
6245 12047 3.819368 CATGCACCTGGTATGGTTATGA 58.181 45.455 0.00 0.00 38.45 2.15
6252 12054 0.255604 TGACCCATGCACCTGGTATG 59.744 55.000 0.00 0.21 39.11 2.39
6253 12055 0.255890 GTGACCCATGCACCTGGTAT 59.744 55.000 0.00 0.00 34.23 2.73
6255 12057 2.436109 GTGACCCATGCACCTGGT 59.564 61.111 5.63 4.54 34.23 4.00
6260 12062 1.078143 GGAGAGGTGACCCATGCAC 60.078 63.158 0.00 0.00 35.56 4.57
6262 12064 2.187946 CGGAGAGGTGACCCATGC 59.812 66.667 0.00 0.00 0.00 4.06
6263 12065 4.034246 TCGGAGAGGTGACCCATG 57.966 61.111 0.00 0.00 0.00 3.66
6274 12076 1.035923 CAGCTGATTAGGCTCGGAGA 58.964 55.000 8.42 0.00 38.03 3.71
6275 12077 0.749649 ACAGCTGATTAGGCTCGGAG 59.250 55.000 23.35 0.00 38.03 4.63
6276 12078 0.461548 CACAGCTGATTAGGCTCGGA 59.538 55.000 23.35 0.00 38.03 4.55
6277 12079 1.156645 GCACAGCTGATTAGGCTCGG 61.157 60.000 23.35 0.00 38.03 4.63
6278 12080 0.460811 TGCACAGCTGATTAGGCTCG 60.461 55.000 23.35 0.00 38.03 5.03
6279 12081 1.297664 CTGCACAGCTGATTAGGCTC 58.702 55.000 23.35 0.40 38.03 4.70
6282 12084 2.286872 CTTCCTGCACAGCTGATTAGG 58.713 52.381 23.35 21.87 0.00 2.69
6283 12085 1.669779 GCTTCCTGCACAGCTGATTAG 59.330 52.381 23.35 14.05 42.31 1.73
6285 12087 2.564471 GCTTCCTGCACAGCTGATT 58.436 52.632 23.35 0.00 42.31 2.57
6286 12088 4.315588 GCTTCCTGCACAGCTGAT 57.684 55.556 23.35 1.19 42.31 2.90
6313 12115 5.048224 AGTGGCATGATATAAAGCATTCTGC 60.048 40.000 0.00 0.00 45.46 4.26
6314 12116 6.570672 AGTGGCATGATATAAAGCATTCTG 57.429 37.500 0.00 0.00 26.26 3.02
6315 12117 8.696043 TTAAGTGGCATGATATAAAGCATTCT 57.304 30.769 0.00 0.00 26.26 2.40
6320 12122 9.626045 GGTTTATTAAGTGGCATGATATAAAGC 57.374 33.333 0.00 15.03 31.59 3.51
6324 12126 9.634021 TTGTGGTTTATTAAGTGGCATGATATA 57.366 29.630 0.00 0.00 0.00 0.86
6328 12130 6.491745 TCTTTGTGGTTTATTAAGTGGCATGA 59.508 34.615 0.00 0.00 0.00 3.07
6329 12131 6.686630 TCTTTGTGGTTTATTAAGTGGCATG 58.313 36.000 0.00 0.00 0.00 4.06
6330 12132 6.572314 GCTCTTTGTGGTTTATTAAGTGGCAT 60.572 38.462 0.00 0.00 0.00 4.40
6331 12133 5.278758 GCTCTTTGTGGTTTATTAAGTGGCA 60.279 40.000 0.00 0.00 0.00 4.92
6332 12134 5.161358 GCTCTTTGTGGTTTATTAAGTGGC 58.839 41.667 0.00 0.00 0.00 5.01
6336 12138 7.440523 AGTCTGCTCTTTGTGGTTTATTAAG 57.559 36.000 0.00 0.00 0.00 1.85
6337 12139 7.817418 AAGTCTGCTCTTTGTGGTTTATTAA 57.183 32.000 0.00 0.00 0.00 1.40
6338 12140 7.817418 AAAGTCTGCTCTTTGTGGTTTATTA 57.183 32.000 0.00 0.00 36.46 0.98
6341 12143 7.500892 TCAATAAAGTCTGCTCTTTGTGGTTTA 59.499 33.333 10.61 0.00 38.02 2.01
6342 12144 6.321181 TCAATAAAGTCTGCTCTTTGTGGTTT 59.679 34.615 10.61 0.00 38.02 3.27
6343 12145 5.827797 TCAATAAAGTCTGCTCTTTGTGGTT 59.172 36.000 10.61 1.80 38.02 3.67
6344 12146 5.239525 GTCAATAAAGTCTGCTCTTTGTGGT 59.760 40.000 10.61 0.00 38.02 4.16
6345 12147 5.471456 AGTCAATAAAGTCTGCTCTTTGTGG 59.529 40.000 10.61 4.37 38.02 4.17
6346 12148 6.551385 AGTCAATAAAGTCTGCTCTTTGTG 57.449 37.500 10.61 9.05 38.02 3.33
6347 12149 6.767902 TGAAGTCAATAAAGTCTGCTCTTTGT 59.232 34.615 10.61 3.79 38.02 2.83
6348 12150 7.041508 AGTGAAGTCAATAAAGTCTGCTCTTTG 60.042 37.037 10.61 0.00 38.02 2.77
6349 12151 6.995091 AGTGAAGTCAATAAAGTCTGCTCTTT 59.005 34.615 7.13 7.13 40.22 2.52
6350 12152 6.529220 AGTGAAGTCAATAAAGTCTGCTCTT 58.471 36.000 0.00 0.00 0.00 2.85
6352 12154 6.793492 AAGTGAAGTCAATAAAGTCTGCTC 57.207 37.500 0.00 0.00 0.00 4.26
6354 12156 8.089115 AGTAAAGTGAAGTCAATAAAGTCTGC 57.911 34.615 0.00 0.00 0.00 4.26
6363 12165 8.204836 ACAGTTGAGTAGTAAAGTGAAGTCAAT 58.795 33.333 9.20 0.00 34.70 2.57
6364 12166 7.491372 CACAGTTGAGTAGTAAAGTGAAGTCAA 59.509 37.037 9.20 0.00 32.24 3.18
6366 12168 7.201145 TCACAGTTGAGTAGTAAAGTGAAGTC 58.799 38.462 9.20 0.00 32.46 3.01
6369 12171 6.423905 GCATCACAGTTGAGTAGTAAAGTGAA 59.576 38.462 9.20 0.00 38.14 3.18
6371 12173 5.928839 AGCATCACAGTTGAGTAGTAAAGTG 59.071 40.000 1.35 1.35 34.35 3.16
6372 12174 6.102897 AGCATCACAGTTGAGTAGTAAAGT 57.897 37.500 0.00 0.00 34.35 2.66
6375 12177 5.221641 ACCAAGCATCACAGTTGAGTAGTAA 60.222 40.000 0.00 0.00 34.35 2.24
6376 12178 4.283467 ACCAAGCATCACAGTTGAGTAGTA 59.717 41.667 0.00 0.00 34.35 1.82
6378 12180 3.668447 ACCAAGCATCACAGTTGAGTAG 58.332 45.455 0.00 0.00 34.35 2.57
6380 12182 2.620115 CAACCAAGCATCACAGTTGAGT 59.380 45.455 0.00 0.00 40.12 3.41
6382 12184 1.337703 GCAACCAAGCATCACAGTTGA 59.662 47.619 5.43 0.00 40.12 3.18
6383 12185 1.338973 AGCAACCAAGCATCACAGTTG 59.661 47.619 0.00 0.00 40.55 3.16
6384 12186 1.610522 GAGCAACCAAGCATCACAGTT 59.389 47.619 0.00 0.00 36.85 3.16
6385 12187 1.242076 GAGCAACCAAGCATCACAGT 58.758 50.000 0.00 0.00 36.85 3.55
6386 12188 0.524862 GGAGCAACCAAGCATCACAG 59.475 55.000 0.00 0.00 38.79 3.66
6388 12190 2.012673 CTAGGAGCAACCAAGCATCAC 58.987 52.381 2.96 0.00 42.04 3.06
6389 12191 1.679944 GCTAGGAGCAACCAAGCATCA 60.680 52.381 2.96 0.00 41.89 3.07
6391 12193 3.181526 GCTAGGAGCAACCAAGCAT 57.818 52.632 2.96 0.00 41.89 3.79
6392 12194 4.722193 GCTAGGAGCAACCAAGCA 57.278 55.556 2.96 0.00 41.89 3.91
6409 12211 8.633075 TTGTCTAATTTGTTCTTGAGCTTTTG 57.367 30.769 0.00 0.00 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.