Multiple sequence alignment - TraesCS1D01G332200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G332200 chr1D 100.000 6441 0 0 1 6441 422874416 422867976 0.000000e+00 11895
1 TraesCS1D01G332200 chr1A 93.947 3040 123 33 939 3949 518812250 518809243 0.000000e+00 4538
2 TraesCS1D01G332200 chr1A 91.756 1031 26 15 4613 5632 518809239 518808257 0.000000e+00 1378
3 TraesCS1D01G332200 chr1A 88.147 464 34 3 1 443 518813451 518812988 3.420000e-147 532
4 TraesCS1D01G332200 chr1A 93.538 325 19 1 470 792 518812989 518812665 3.490000e-132 483
5 TraesCS1D01G332200 chr1A 85.079 315 36 2 5822 6125 518806969 518806655 1.740000e-80 311
6 TraesCS1D01G332200 chr1A 79.480 346 35 17 6120 6441 518806587 518806254 5.060000e-51 213
7 TraesCS1D01G332200 chr1A 95.082 122 5 1 790 911 518812495 518812375 2.370000e-44 191
8 TraesCS1D01G332200 chr1B 89.254 1675 78 27 790 2385 571711693 571710042 0.000000e+00 2002
9 TraesCS1D01G332200 chr1B 92.189 973 65 6 2986 3953 571709085 571708119 0.000000e+00 1365
10 TraesCS1D01G332200 chr1B 89.508 1077 85 11 4611 5659 571708121 571707045 0.000000e+00 1338
11 TraesCS1D01G332200 chr1B 88.603 816 66 9 1 792 571712680 571711868 0.000000e+00 966
12 TraesCS1D01G332200 chr1B 91.841 527 31 5 2454 2980 571709639 571709125 0.000000e+00 725
13 TraesCS1D01G332200 chr1B 89.451 474 42 4 5648 6116 571707015 571706545 5.560000e-165 592
14 TraesCS1D01G332200 chr1B 86.429 280 31 7 515 790 571716865 571716589 3.770000e-77 300
15 TraesCS1D01G332200 chr1B 81.381 333 31 13 6122 6441 571706450 571706136 6.450000e-60 243
16 TraesCS1D01G332200 chr4B 94.074 675 32 4 3945 4613 645091207 645091879 0.000000e+00 1018
17 TraesCS1D01G332200 chr7A 91.618 692 23 16 3949 4611 295251110 295251795 0.000000e+00 924
18 TraesCS1D01G332200 chr7A 91.189 681 23 16 3955 4604 724033059 724033733 0.000000e+00 891
19 TraesCS1D01G332200 chr7A 89.985 679 32 16 3954 4604 548561152 548561822 0.000000e+00 845
20 TraesCS1D01G332200 chr7A 89.146 691 35 19 3955 4617 624644499 624645177 0.000000e+00 824
21 TraesCS1D01G332200 chr6A 89.914 694 36 16 3949 4614 561498098 561498785 0.000000e+00 863
22 TraesCS1D01G332200 chr2B 92.701 548 22 2 4072 4614 98282808 98282274 0.000000e+00 774
23 TraesCS1D01G332200 chr2D 93.006 529 20 4 3956 4479 326203552 326203036 0.000000e+00 756
24 TraesCS1D01G332200 chr5A 94.286 420 18 4 3952 4370 523613043 523613457 7.040000e-179 638
25 TraesCS1D01G332200 chr3B 93.769 337 11 5 3950 4279 727320032 727320365 1.250000e-136 497
26 TraesCS1D01G332200 chr3B 93.776 241 14 1 4371 4611 727320842 727321081 1.710000e-95 361
27 TraesCS1D01G332200 chr5B 85.629 167 20 4 4450 4616 710240102 710240264 8.590000e-39 172


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G332200 chr1D 422867976 422874416 6440 True 11895.000000 11895 100.000000 1 6441 1 chr1D.!!$R1 6440
1 TraesCS1D01G332200 chr1A 518806254 518813451 7197 True 1092.285714 4538 89.575571 1 6441 7 chr1A.!!$R1 6440
2 TraesCS1D01G332200 chr1B 571706136 571716865 10729 True 941.375000 2002 88.582000 1 6441 8 chr1B.!!$R1 6440
3 TraesCS1D01G332200 chr4B 645091207 645091879 672 False 1018.000000 1018 94.074000 3945 4613 1 chr4B.!!$F1 668
4 TraesCS1D01G332200 chr7A 295251110 295251795 685 False 924.000000 924 91.618000 3949 4611 1 chr7A.!!$F1 662
5 TraesCS1D01G332200 chr7A 724033059 724033733 674 False 891.000000 891 91.189000 3955 4604 1 chr7A.!!$F4 649
6 TraesCS1D01G332200 chr7A 548561152 548561822 670 False 845.000000 845 89.985000 3954 4604 1 chr7A.!!$F2 650
7 TraesCS1D01G332200 chr7A 624644499 624645177 678 False 824.000000 824 89.146000 3955 4617 1 chr7A.!!$F3 662
8 TraesCS1D01G332200 chr6A 561498098 561498785 687 False 863.000000 863 89.914000 3949 4614 1 chr6A.!!$F1 665
9 TraesCS1D01G332200 chr2B 98282274 98282808 534 True 774.000000 774 92.701000 4072 4614 1 chr2B.!!$R1 542
10 TraesCS1D01G332200 chr2D 326203036 326203552 516 True 756.000000 756 93.006000 3956 4479 1 chr2D.!!$R1 523
11 TraesCS1D01G332200 chr3B 727320032 727321081 1049 False 429.000000 497 93.772500 3950 4611 2 chr3B.!!$F1 661

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
218 4405 0.179000 GAGATGCTCACGGGGAACAT 59.821 55.000 0.00 0.00 35.06 2.71 F
1017 5528 0.172578 GCCATAGCCAAAACCCGTTC 59.827 55.000 0.00 0.00 0.00 3.95 F
1023 5534 0.458260 GCCAAAACCCGTTCAGTGTT 59.542 50.000 0.00 0.00 0.00 3.32 F
1034 5545 0.598158 TTCAGTGTTACCCGCGTGAC 60.598 55.000 4.92 0.00 0.00 3.67 F
2206 6761 1.276622 ACCCATGTACAGACCACTCC 58.723 55.000 0.33 0.00 0.00 3.85 F
2483 7377 1.397343 GCAGATGTCAGTGTGCATCAG 59.603 52.381 22.53 18.23 42.72 2.90 F
4104 9035 1.617850 CTCCCATCGATCTCTTCCCTG 59.382 57.143 0.00 0.00 0.00 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1086 5598 0.692756 TGGGCGAGGAATGGTATGGA 60.693 55.000 0.00 0.00 0.00 3.41 R
2206 6761 0.732538 GCTTTGTCGGCAAATTCCCG 60.733 55.000 16.67 4.94 42.88 5.14 R
2438 7026 2.429971 ACCACATGACATTTGTTGCACA 59.570 40.909 0.00 0.00 0.00 4.57 R
2893 7787 2.657336 GCAAGATTGATTGCGTGGC 58.343 52.632 0.00 0.00 45.43 5.01 R
3813 8744 0.462581 TCTGGATTGCTCGCATCACC 60.463 55.000 0.00 0.00 0.00 4.02 R
4281 9281 1.377594 TGCTCGGCATTGCATCTGT 60.378 52.632 11.39 0.00 33.94 3.41 R
5975 12469 0.539986 TCCGTTATCTCACTTGGGCC 59.460 55.000 0.00 0.00 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 3802 2.248431 GTGAACGTGCGCTGGAAC 59.752 61.111 9.73 0.00 0.00 3.62
52 4238 1.304713 CTGCAATGGCCTGGTTCCT 60.305 57.895 3.32 0.00 40.13 3.36
218 4405 0.179000 GAGATGCTCACGGGGAACAT 59.821 55.000 0.00 0.00 35.06 2.71
256 4443 1.148310 CTCACGTTGACCAAAGCGAT 58.852 50.000 0.00 0.00 0.00 4.58
275 4462 3.674682 CGATAGGAAGGAGATGATTCGGC 60.675 52.174 0.00 0.00 0.00 5.54
279 4466 1.067821 GAAGGAGATGATTCGGCGACT 59.932 52.381 10.16 3.40 0.00 4.18
306 4493 7.434307 GGCTACAAATCATCAGATCAAACAATG 59.566 37.037 0.00 0.00 31.90 2.82
312 4499 1.358787 TCAGATCAAACAATGGGGGCT 59.641 47.619 0.00 0.00 0.00 5.19
517 4728 3.948719 GGCCCCGTGTGAGGAACA 61.949 66.667 0.00 0.00 36.04 3.18
535 4746 1.081892 CACATCCTGAGCAAAGACGG 58.918 55.000 0.00 0.00 0.00 4.79
560 4771 2.032924 GGTTTCCACTCAACCTTTGTCG 59.967 50.000 0.00 0.00 40.66 4.35
664 4876 2.038387 ATCACATGGAAACGTAGGGC 57.962 50.000 0.00 0.00 0.00 5.19
716 4929 8.309019 CGTATTAGTGACACGTATTTACACTTG 58.691 37.037 13.99 0.00 41.17 3.16
929 5331 6.307031 TCTATCTCGAGTATTCAAGACAGC 57.693 41.667 13.13 0.00 0.00 4.40
1016 5527 0.251608 AGCCATAGCCAAAACCCGTT 60.252 50.000 0.00 0.00 41.25 4.44
1017 5528 0.172578 GCCATAGCCAAAACCCGTTC 59.827 55.000 0.00 0.00 0.00 3.95
1018 5529 1.540267 CCATAGCCAAAACCCGTTCA 58.460 50.000 0.00 0.00 0.00 3.18
1023 5534 0.458260 GCCAAAACCCGTTCAGTGTT 59.542 50.000 0.00 0.00 0.00 3.32
1032 5543 1.857364 GTTCAGTGTTACCCGCGTG 59.143 57.895 4.92 0.00 0.00 5.34
1034 5545 0.598158 TTCAGTGTTACCCGCGTGAC 60.598 55.000 4.92 0.00 0.00 3.67
1066 5578 3.372554 CTCTCTTCGCCGGTTCCCC 62.373 68.421 1.90 0.00 0.00 4.81
1086 5598 4.338012 CCCACGGGGTTAGAAAGTTTAAT 58.662 43.478 1.28 0.00 38.25 1.40
1134 5647 3.631250 TCTAATCAATCACCTTTGCCCC 58.369 45.455 0.00 0.00 0.00 5.80
1194 5707 3.842923 ACTGGAGGAGGCGATGCG 61.843 66.667 0.00 0.00 0.00 4.73
1816 6364 2.195727 TCCTCATATGTGAACCAGCCA 58.804 47.619 6.35 0.00 33.05 4.75
1853 6402 2.265739 GTGCTCTGGCGTCATCCA 59.734 61.111 0.00 0.00 42.25 3.41
1984 6535 1.747355 AGCTGGAAAAGGCATCGATTG 59.253 47.619 0.00 0.00 0.00 2.67
2002 6553 2.358737 GGAGGGTTGTGGCGACAG 60.359 66.667 0.70 0.00 44.46 3.51
2014 6569 1.743252 GCGACAGCAGGGAGAAAGG 60.743 63.158 0.00 0.00 44.35 3.11
2061 6616 4.814771 GTGGAATTTTACATACGGAGGGAG 59.185 45.833 0.00 0.00 0.00 4.30
2170 6725 7.141363 AGTGTGCATCTTTCATGTTTAACTTC 58.859 34.615 0.00 0.00 0.00 3.01
2185 6740 6.096987 TGTTTAACTTCCACTTTTGGCATGTA 59.903 34.615 0.00 0.00 43.56 2.29
2186 6741 6.716934 TTAACTTCCACTTTTGGCATGTAA 57.283 33.333 0.00 0.00 43.56 2.41
2206 6761 1.276622 ACCCATGTACAGACCACTCC 58.723 55.000 0.33 0.00 0.00 3.85
2317 6875 6.430000 ACTCAATTGTGCCTAATTACGTCTTT 59.570 34.615 5.13 0.00 0.00 2.52
2318 6876 6.607689 TCAATTGTGCCTAATTACGTCTTTG 58.392 36.000 5.13 0.00 0.00 2.77
2390 6978 6.615088 ACTGTGCATCACTTGTTTTCATATC 58.385 36.000 0.00 0.00 35.11 1.63
2438 7026 6.432162 GTGTGCATATGGGTAATGAGATTCAT 59.568 38.462 4.56 0.00 39.09 2.57
2483 7377 1.397343 GCAGATGTCAGTGTGCATCAG 59.603 52.381 22.53 18.23 42.72 2.90
2592 7486 5.755861 GCAGAGAAAGCGAATAAGAGGTAAT 59.244 40.000 0.00 0.00 0.00 1.89
2669 7563 8.691797 ACTATAACTTGTGTGTCCAATGTTTTT 58.308 29.630 0.00 0.00 0.00 1.94
2670 7564 7.769272 ATAACTTGTGTGTCCAATGTTTTTG 57.231 32.000 0.00 0.00 0.00 2.44
2674 7568 6.484977 ACTTGTGTGTCCAATGTTTTTGTTTT 59.515 30.769 0.00 0.00 0.00 2.43
2928 7822 4.464008 TCTTGCATATGGAGGGTGAATTC 58.536 43.478 6.50 0.00 0.00 2.17
2947 7841 7.689812 GTGAATTCATATTTGTGTGAGAAGACG 59.310 37.037 12.12 0.00 0.00 4.18
2948 7842 7.387673 TGAATTCATATTTGTGTGAGAAGACGT 59.612 33.333 3.38 0.00 0.00 4.34
3083 8011 5.574970 ATCTCATGGAGTTTTATCCCTCC 57.425 43.478 0.00 0.00 46.20 4.30
3289 8220 3.194005 GAATCTAACAGGGATTCGGCA 57.806 47.619 0.00 0.00 39.39 5.69
3393 8324 8.791327 TCTCAAGATGAAAATTGCATACTACA 57.209 30.769 0.00 0.00 0.00 2.74
3394 8325 8.668353 TCTCAAGATGAAAATTGCATACTACAC 58.332 33.333 0.00 0.00 0.00 2.90
3588 8519 6.149474 GTCTTGCTTCTACATTGGTGTGTTAT 59.851 38.462 0.00 0.00 39.39 1.89
3589 8520 7.333423 GTCTTGCTTCTACATTGGTGTGTTATA 59.667 37.037 0.00 0.00 39.39 0.98
3602 8533 8.458573 TTGGTGTGTTATACATATTGAATCCC 57.541 34.615 0.00 0.00 42.24 3.85
3659 8590 2.738846 AGCTGCAATGAGTTTCAGTACG 59.261 45.455 1.02 0.00 0.00 3.67
3674 8605 4.728534 TCAGTACGCCAATTAAATGTTGC 58.271 39.130 0.00 0.00 0.00 4.17
3918 8849 2.244651 CCCGAGAAAATAGGCGCGG 61.245 63.158 8.83 0.00 45.24 6.46
3967 8898 4.853924 ATCCTTACAGCCTGTTTGTTTG 57.146 40.909 1.02 0.00 0.00 2.93
4104 9035 1.617850 CTCCCATCGATCTCTTCCCTG 59.382 57.143 0.00 0.00 0.00 4.45
4281 9281 5.221461 GCCAGCCTAACTGCTTACTAATCTA 60.221 44.000 0.00 0.00 45.78 1.98
4295 9295 4.060900 ACTAATCTACAGATGCAATGCCG 58.939 43.478 1.53 0.00 34.49 5.69
4373 9705 4.697300 TTGCTACGTAACAAAGTTCGAC 57.303 40.909 8.90 0.00 0.00 4.20
4460 9822 1.906574 TGCGTGTCCCCTTCTTTATCT 59.093 47.619 0.00 0.00 0.00 1.98
4769 10131 7.762159 TGCAACGACATAGTAGATTACATTCAA 59.238 33.333 0.00 0.00 0.00 2.69
4866 10230 2.806434 TGCATTGCAGGTAAAGATGGT 58.194 42.857 7.38 0.00 33.32 3.55
5059 10426 5.654650 TGTTGTGAAAAACAACTACATCCCT 59.345 36.000 18.93 0.00 44.97 4.20
5105 10472 5.427378 TCCATGATCAAATGTCTTCGCTAA 58.573 37.500 0.00 0.00 0.00 3.09
5117 10484 4.332543 TGTCTTCGCTAAATATGCAACCTG 59.667 41.667 0.00 0.00 0.00 4.00
5140 10507 0.184211 CATGCCTGGATCATCACCCA 59.816 55.000 0.00 0.00 0.00 4.51
5316 10693 4.474287 TGACCGTTGGGGGTATTTATAGTT 59.526 41.667 0.00 0.00 41.40 2.24
5317 10694 5.044993 TGACCGTTGGGGGTATTTATAGTTT 60.045 40.000 0.00 0.00 41.40 2.66
5405 10789 4.957327 AGAACCTAGACATAGTTGGTCTCC 59.043 45.833 0.00 0.00 44.14 3.71
5420 10809 8.660295 AGTTGGTCTCCGATAACCATATATTA 57.340 34.615 4.14 0.00 44.72 0.98
5472 10861 6.710744 GGTTGAGTCAGACTTTTTATCTTCCA 59.289 38.462 4.05 0.00 0.00 3.53
5476 10865 7.388776 TGAGTCAGACTTTTTATCTTCCACATG 59.611 37.037 4.05 0.00 0.00 3.21
5606 10996 8.546597 AAAACTTTTCCATATGTATTGCAACC 57.453 30.769 0.00 0.00 0.00 3.77
5625 11015 1.204467 CCCCATGTGTTTATGGTGTGC 59.796 52.381 0.00 0.00 44.98 4.57
5643 11033 0.179936 GCTGGAGCTGGCAAGTCTAT 59.820 55.000 0.00 0.00 38.21 1.98
5646 11036 2.104451 CTGGAGCTGGCAAGTCTATCAT 59.896 50.000 0.00 0.00 0.00 2.45
5659 11049 6.536582 GCAAGTCTATCATGAGCAAGTCTTTA 59.463 38.462 0.09 0.00 0.00 1.85
5660 11050 7.065085 GCAAGTCTATCATGAGCAAGTCTTTAA 59.935 37.037 0.09 0.00 0.00 1.52
5684 11115 5.041191 AGGACTATCTAAAGGCATGGTTG 57.959 43.478 0.00 0.00 0.00 3.77
5693 11124 1.742761 AGGCATGGTTGATGAAGTCG 58.257 50.000 0.00 0.00 33.31 4.18
5715 11146 5.048507 CGGTTACATTCTCCCTTAGCTTAC 58.951 45.833 0.00 0.00 0.00 2.34
5749 11180 6.266558 GGGCAACAATATCCATACCACATTTA 59.733 38.462 0.00 0.00 39.74 1.40
5796 11600 7.904558 ATGAATTATGCCGAGATATCCTCTA 57.095 36.000 0.00 0.00 39.78 2.43
5883 12377 6.554334 TGAACGAATTAAACCAAGAGAAGG 57.446 37.500 0.00 0.00 0.00 3.46
5923 12417 0.324614 ACATGCACGACATCCTTGGA 59.675 50.000 0.00 0.00 36.64 3.53
5949 12443 5.884232 CACATCCAATCTCTCCATTCAAAGA 59.116 40.000 0.00 0.00 0.00 2.52
5975 12469 2.877043 AGCAAACTGAAGGCAAACAG 57.123 45.000 0.00 0.00 39.65 3.16
5976 12470 1.410153 AGCAAACTGAAGGCAAACAGG 59.590 47.619 0.00 0.00 38.30 4.00
5998 12497 3.432326 GCCCAAGTGAGATAACGGAGAAT 60.432 47.826 0.00 0.00 0.00 2.40
6005 12504 8.568794 CAAGTGAGATAACGGAGAATATCACTA 58.431 37.037 11.65 0.00 46.36 2.74
6015 12514 6.535508 ACGGAGAATATCACTAAACTTGAAGC 59.464 38.462 0.00 0.00 0.00 3.86
6016 12515 6.018669 CGGAGAATATCACTAAACTTGAAGCC 60.019 42.308 0.00 0.00 0.00 4.35
6020 12519 1.871039 TCACTAAACTTGAAGCCGTGC 59.129 47.619 0.00 0.00 0.00 5.34
6037 12536 1.672898 GCCCAAGGCTTGCATCAAA 59.327 52.632 21.77 0.00 46.69 2.69
6039 12538 1.339342 GCCCAAGGCTTGCATCAAAAT 60.339 47.619 21.77 0.00 46.69 1.82
6047 12546 3.922240 GGCTTGCATCAAAATGTACTGTG 59.078 43.478 0.00 0.00 35.18 3.66
6059 12564 2.237965 TACTGTGGGCAGGGGCATT 61.238 57.895 0.00 0.00 46.62 3.56
6068 12573 2.601905 GGCAGGGGCATTGAATCTTAT 58.398 47.619 0.00 0.00 43.71 1.73
6071 12576 3.638160 GCAGGGGCATTGAATCTTATTGA 59.362 43.478 0.00 0.00 40.72 2.57
6076 12581 5.221126 GGGGCATTGAATCTTATTGACTGAC 60.221 44.000 0.00 0.00 0.00 3.51
6094 12599 1.476891 GACGAGTCATGTCCAAGGCTA 59.523 52.381 0.00 0.00 0.00 3.93
6102 12607 3.117776 TCATGTCCAAGGCTAGCATCAAT 60.118 43.478 18.24 0.00 0.00 2.57
6113 12618 2.742428 AGCATCAATACTGTGGGCAT 57.258 45.000 0.00 0.00 0.00 4.40
6116 12621 2.658285 CATCAATACTGTGGGCATGGT 58.342 47.619 0.00 0.00 0.00 3.55
6117 12622 2.897271 TCAATACTGTGGGCATGGTT 57.103 45.000 0.00 0.00 0.00 3.67
6118 12623 4.206375 CATCAATACTGTGGGCATGGTTA 58.794 43.478 0.00 0.00 0.00 2.85
6140 12734 8.304596 GGTTATGTGTTAATCTATCTCATCCGA 58.695 37.037 0.00 0.00 0.00 4.55
6193 12788 6.089417 GCACACCTAATTTATTTCAGTTGTGC 59.911 38.462 9.60 9.60 39.29 4.57
6219 12814 0.617535 TCATCCGGCTCTTCAGGGAA 60.618 55.000 0.00 0.00 31.24 3.97
6225 12820 2.945668 CCGGCTCTTCAGGGAATTTAAG 59.054 50.000 0.00 0.00 0.00 1.85
6233 12828 4.314522 TCAGGGAATTTAAGTGCATGGA 57.685 40.909 0.00 0.00 0.00 3.41
6234 12829 4.272489 TCAGGGAATTTAAGTGCATGGAG 58.728 43.478 0.00 0.00 0.00 3.86
6235 12830 4.019174 CAGGGAATTTAAGTGCATGGAGT 58.981 43.478 0.00 0.00 0.00 3.85
6237 12832 3.131046 GGGAATTTAAGTGCATGGAGTGG 59.869 47.826 0.00 0.00 0.00 4.00
6238 12833 3.131046 GGAATTTAAGTGCATGGAGTGGG 59.869 47.826 0.00 0.00 0.00 4.61
6240 12835 3.517296 TTTAAGTGCATGGAGTGGGAA 57.483 42.857 0.00 0.00 0.00 3.97
6241 12836 2.787473 TAAGTGCATGGAGTGGGAAG 57.213 50.000 0.00 0.00 0.00 3.46
6242 12837 1.067295 AAGTGCATGGAGTGGGAAGA 58.933 50.000 0.00 0.00 0.00 2.87
6243 12838 1.293062 AGTGCATGGAGTGGGAAGAT 58.707 50.000 0.00 0.00 0.00 2.40
6244 12839 2.481441 AGTGCATGGAGTGGGAAGATA 58.519 47.619 0.00 0.00 0.00 1.98
6245 12840 2.171448 AGTGCATGGAGTGGGAAGATAC 59.829 50.000 0.00 0.00 0.00 2.24
6246 12841 2.092968 GTGCATGGAGTGGGAAGATACA 60.093 50.000 0.00 0.00 0.00 2.29
6247 12842 2.779430 TGCATGGAGTGGGAAGATACAT 59.221 45.455 0.00 0.00 0.00 2.29
6248 12843 3.973305 TGCATGGAGTGGGAAGATACATA 59.027 43.478 0.00 0.00 0.00 2.29
6252 12847 6.537355 CATGGAGTGGGAAGATACATACATT 58.463 40.000 0.00 0.00 0.00 2.71
6289 12884 4.395854 CCTTGTAGTGTTAGATGCAATGCA 59.604 41.667 11.44 11.44 44.86 3.96
6291 12886 3.940852 TGTAGTGTTAGATGCAATGCAGG 59.059 43.478 14.98 0.00 43.65 4.85
6298 12904 3.008835 AGATGCAATGCAGGTACACAT 57.991 42.857 14.98 0.00 43.65 3.21
6304 12910 4.522405 TGCAATGCAGGTACACATAAGTTT 59.478 37.500 2.72 0.00 33.32 2.66
6306 12912 5.564651 GCAATGCAGGTACACATAAGTTTGT 60.565 40.000 0.00 0.00 0.00 2.83
6308 12914 6.737254 ATGCAGGTACACATAAGTTTGTAC 57.263 37.500 7.52 7.52 44.95 2.90
6313 12919 8.943002 GCAGGTACACATAAGTTTGTACTAAAT 58.057 33.333 13.42 0.00 45.01 1.40
6323 12929 6.796705 AGTTTGTACTAAATTGAAGGACCG 57.203 37.500 0.00 0.00 31.21 4.79
6328 12935 9.504708 TTTGTACTAAATTGAAGGACCGAATTA 57.495 29.630 0.00 0.00 0.00 1.40
6334 12941 4.829872 TTGAAGGACCGAATTAGCCTTA 57.170 40.909 0.00 0.00 40.64 2.69
6335 12942 4.402056 TGAAGGACCGAATTAGCCTTAG 57.598 45.455 0.00 0.00 40.64 2.18
6338 12945 5.046159 TGAAGGACCGAATTAGCCTTAGAAA 60.046 40.000 0.00 0.00 40.64 2.52
6350 12965 4.860022 AGCCTTAGAAATTATGTGCCAGT 58.140 39.130 0.00 0.00 0.00 4.00
6351 12966 4.641989 AGCCTTAGAAATTATGTGCCAGTG 59.358 41.667 0.00 0.00 0.00 3.66
6359 12974 8.978874 AGAAATTATGTGCCAGTGTATGAATA 57.021 30.769 0.00 0.00 0.00 1.75
6370 12985 8.811994 TGCCAGTGTATGAATAAGCATAGTATA 58.188 33.333 0.00 0.00 31.80 1.47
6399 13018 3.306917 TTTCCGTGTTCTCGCTTCATA 57.693 42.857 0.00 0.00 0.00 2.15
6407 13026 5.520632 GTGTTCTCGCTTCATATGTAGCTA 58.479 41.667 25.84 17.37 36.47 3.32
6409 13028 6.143118 GTGTTCTCGCTTCATATGTAGCTAAG 59.857 42.308 25.84 22.11 36.47 2.18
6411 13030 3.914312 TCGCTTCATATGTAGCTAAGCC 58.086 45.455 25.84 8.37 39.46 4.35
6412 13031 2.663602 CGCTTCATATGTAGCTAAGCCG 59.336 50.000 25.84 14.36 39.46 5.52
6413 13032 3.654414 GCTTCATATGTAGCTAAGCCGT 58.346 45.455 22.86 0.00 37.24 5.68
6414 13033 4.615223 CGCTTCATATGTAGCTAAGCCGTA 60.615 45.833 25.84 0.00 39.46 4.02
6415 13034 5.227908 GCTTCATATGTAGCTAAGCCGTAA 58.772 41.667 22.86 0.00 37.24 3.18
6416 13035 5.118817 GCTTCATATGTAGCTAAGCCGTAAC 59.881 44.000 22.86 0.00 37.24 2.50
6417 13036 6.401047 TTCATATGTAGCTAAGCCGTAACT 57.599 37.500 1.90 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 4238 2.404186 ACGTCGCGTCCATAGCTCA 61.404 57.895 5.77 0.00 33.69 4.26
102 4288 2.440796 CACCGTCGTAGCCCCCTA 60.441 66.667 0.00 0.00 0.00 3.53
187 4374 1.436748 GCATCTCTGCTCTCGCTCA 59.563 57.895 0.00 0.00 45.32 4.26
218 4405 0.625849 GCAGGAAATCCCCTCCTTCA 59.374 55.000 0.00 0.00 41.61 3.02
256 4443 1.613925 CGCCGAATCATCTCCTTCCTA 59.386 52.381 0.00 0.00 0.00 2.94
275 4462 3.785486 TCTGATGATTTGTAGCCAGTCG 58.215 45.455 0.00 0.00 0.00 4.18
279 4466 5.945191 TGTTTGATCTGATGATTTGTAGCCA 59.055 36.000 0.00 0.00 32.19 4.75
312 4499 1.969064 CCAATGTTTCGGCCGGTCA 60.969 57.895 27.83 21.22 0.00 4.02
399 4607 1.970917 GACCTTGCGAGTTGGATGCG 61.971 60.000 0.00 0.00 0.00 4.73
517 4728 0.036010 CCCGTCTTTGCTCAGGATGT 60.036 55.000 0.00 0.00 37.40 3.06
535 4746 3.341263 GGTTGAGTGGAAACCTCCC 57.659 57.895 0.00 0.00 43.20 4.30
633 4845 5.957842 TTCCATGTGATTTACAGGTGTTC 57.042 39.130 0.00 0.00 43.80 3.18
675 4887 8.056571 GTCACTAATACGACATGTTTATTCTGC 58.943 37.037 13.97 6.93 32.24 4.26
678 4890 8.048436 CGTGTCACTAATACGACATGTTTATTC 58.952 37.037 13.97 4.44 44.40 1.75
1016 5527 1.007038 GTCACGCGGGTAACACTGA 60.007 57.895 8.89 0.00 39.74 3.41
1017 5528 1.006571 AGTCACGCGGGTAACACTG 60.007 57.895 8.89 0.00 39.74 3.66
1018 5529 1.006571 CAGTCACGCGGGTAACACT 60.007 57.895 8.89 0.11 39.74 3.55
1032 5543 2.363147 AGACGGAGAGGCCCAGTC 60.363 66.667 0.00 0.13 33.25 3.51
1034 5545 2.043450 AGAGACGGAGAGGCCCAG 60.043 66.667 0.00 0.00 0.00 4.45
1040 5551 1.725066 GGCGAAGAGAGACGGAGAG 59.275 63.158 0.00 0.00 0.00 3.20
1066 5578 5.005094 TGGATTAAACTTTCTAACCCCGTG 58.995 41.667 0.00 0.00 0.00 4.94
1086 5598 0.692756 TGGGCGAGGAATGGTATGGA 60.693 55.000 0.00 0.00 0.00 3.41
1194 5707 4.525949 GGTTAGGGTCGGGCTCGC 62.526 72.222 0.00 0.00 36.13 5.03
1205 5718 3.793888 GGTCCGGCAGGGGTTAGG 61.794 72.222 2.05 0.00 38.33 2.69
1431 5959 1.141881 ATCTCATGGACGTCGTGCC 59.858 57.895 14.66 10.22 32.54 5.01
1513 6041 1.346365 GTCTCAGCATCGCGTTGTAA 58.654 50.000 17.75 4.05 0.00 2.41
1570 6098 3.950395 ACTTCGATTAGTAGCGTACCCTT 59.050 43.478 0.00 0.00 34.18 3.95
1612 6143 8.681486 TTCCTTCATTTGTACTATGATGATGG 57.319 34.615 17.84 17.55 41.53 3.51
1619 6150 9.490663 GAAATCGTTTCCTTCATTTGTACTATG 57.509 33.333 0.00 0.00 33.56 2.23
1620 6151 9.449719 AGAAATCGTTTCCTTCATTTGTACTAT 57.550 29.630 0.00 0.00 40.54 2.12
1621 6152 8.717821 CAGAAATCGTTTCCTTCATTTGTACTA 58.282 33.333 0.00 0.00 40.54 1.82
1708 6256 2.961522 TTCGTTGAGCAAATTCGACC 57.038 45.000 0.00 0.00 0.00 4.79
1816 6364 3.193267 CACCGATGGACACAAAATGGATT 59.807 43.478 0.00 0.00 0.00 3.01
1853 6402 3.125316 GCAACGCTAGCTGTTCTTGTTAT 59.875 43.478 17.96 0.00 0.00 1.89
1942 6493 5.172053 GCTCGTGAGAACTGACAAAAATTTG 59.828 40.000 0.00 4.40 41.26 2.32
1984 6535 3.901797 CTGTCGCCACAACCCTCCC 62.902 68.421 0.00 0.00 29.82 4.30
2002 6553 2.239907 ACTCCAATACCTTTCTCCCTGC 59.760 50.000 0.00 0.00 0.00 4.85
2005 6556 4.141459 CCCTAACTCCAATACCTTTCTCCC 60.141 50.000 0.00 0.00 0.00 4.30
2014 6569 7.280205 CACACATCTTAACCCTAACTCCAATAC 59.720 40.741 0.00 0.00 0.00 1.89
2092 6647 5.511373 GGGAAACAAAGAATTTCTTGAGGGG 60.511 44.000 12.27 3.68 36.71 4.79
2146 6701 6.363357 GGAAGTTAAACATGAAAGATGCACAC 59.637 38.462 0.00 0.00 0.00 3.82
2185 6740 2.039879 GGAGTGGTCTGTACATGGGTTT 59.960 50.000 0.00 0.00 0.00 3.27
2186 6741 1.628846 GGAGTGGTCTGTACATGGGTT 59.371 52.381 0.00 0.00 0.00 4.11
2206 6761 0.732538 GCTTTGTCGGCAAATTCCCG 60.733 55.000 16.67 4.94 42.88 5.14
2307 6862 8.542497 TGTTTCATAAGTAGCAAAGACGTAAT 57.458 30.769 0.00 0.00 0.00 1.89
2368 6926 6.822667 AGATATGAAAACAAGTGATGCACA 57.177 33.333 0.00 0.00 36.74 4.57
2369 6927 7.978982 ACTAGATATGAAAACAAGTGATGCAC 58.021 34.615 0.00 0.00 34.10 4.57
2390 6978 8.280497 ACACAAATAGTAAAGCGAAACAACTAG 58.720 33.333 0.00 0.00 0.00 2.57
2438 7026 2.429971 ACCACATGACATTTGTTGCACA 59.570 40.909 0.00 0.00 0.00 4.57
2483 7377 3.550437 TCCAATGAGGAAGAGCTAAGC 57.450 47.619 0.00 0.00 45.65 3.09
2893 7787 2.657336 GCAAGATTGATTGCGTGGC 58.343 52.632 0.00 0.00 45.43 5.01
2906 7800 4.079844 TGAATTCACCCTCCATATGCAAGA 60.080 41.667 3.38 0.00 0.00 3.02
2928 7822 8.182227 TCTAGTACGTCTTCTCACACAAATATG 58.818 37.037 0.00 0.00 0.00 1.78
3069 7997 9.634021 ATTTCAATAAGAGGAGGGATAAAACTC 57.366 33.333 0.00 0.00 0.00 3.01
3077 8005 4.079787 CACCCATTTCAATAAGAGGAGGGA 60.080 45.833 0.00 0.00 36.33 4.20
3083 8011 5.105635 ACATGCACACCCATTTCAATAAGAG 60.106 40.000 0.00 0.00 0.00 2.85
3289 8220 4.561105 CTTTTCTACTCCTTGAGCGTCTT 58.439 43.478 0.00 0.00 32.04 3.01
3393 8324 2.419297 GGTCATCAGATTCCTTGCTCGT 60.419 50.000 0.00 0.00 0.00 4.18
3394 8325 2.208431 GGTCATCAGATTCCTTGCTCG 58.792 52.381 0.00 0.00 0.00 5.03
3588 8519 9.046846 AGAGGATAATTCGGGATTCAATATGTA 57.953 33.333 0.00 0.00 0.00 2.29
3589 8520 7.922382 AGAGGATAATTCGGGATTCAATATGT 58.078 34.615 0.00 0.00 0.00 2.29
3600 8531 4.703897 TGTTTGCTAGAGGATAATTCGGG 58.296 43.478 0.00 0.00 0.00 5.14
3602 8533 6.258727 ACACATGTTTGCTAGAGGATAATTCG 59.741 38.462 0.00 0.00 0.00 3.34
3659 8590 6.090628 TCAAATTCTCGCAACATTTAATTGGC 59.909 34.615 2.66 0.00 0.00 4.52
3674 8605 7.545362 ACACTATTGATCCTTCAAATTCTCG 57.455 36.000 0.00 0.00 44.70 4.04
3813 8744 0.462581 TCTGGATTGCTCGCATCACC 60.463 55.000 0.00 0.00 0.00 4.02
3918 8849 4.404073 ACTTCAGGTCTACATCACCATCTC 59.596 45.833 0.00 0.00 36.23 2.75
4281 9281 1.377594 TGCTCGGCATTGCATCTGT 60.378 52.632 11.39 0.00 33.94 3.41
4373 9705 7.659390 AGAATAGAAAGGGAAAATAGATCTGCG 59.341 37.037 5.18 0.00 0.00 5.18
4559 9921 5.400189 GGGATTGGGAATTTATGAGAGGGAA 60.400 44.000 0.00 0.00 0.00 3.97
4818 10182 8.573035 CCATGTTAAATGTTAAACACCTACACT 58.427 33.333 0.00 0.00 38.35 3.55
4866 10230 3.709587 ACCCTCTTCATAGTTTCCTCGA 58.290 45.455 0.00 0.00 0.00 4.04
5037 10404 5.888724 TCAGGGATGTAGTTGTTTTTCACAA 59.111 36.000 0.00 0.00 43.55 3.33
5074 10441 6.611785 AGACATTTGATCATGGATCTGGAAT 58.388 36.000 0.00 3.54 39.56 3.01
5105 10472 2.428171 GGCATGACACAGGTTGCATATT 59.572 45.455 0.00 0.00 33.39 1.28
5117 10484 1.945394 GTGATGATCCAGGCATGACAC 59.055 52.381 0.00 0.00 31.45 3.67
5140 10507 5.103940 AGGAATACCTATGTGCATCCTTTGT 60.104 40.000 0.00 0.00 45.83 2.83
5278 10650 6.155827 CCAACGGTCAACAACAATAATGAAT 58.844 36.000 0.00 0.00 0.00 2.57
5285 10662 1.036707 CCCCAACGGTCAACAACAAT 58.963 50.000 0.00 0.00 0.00 2.71
5316 10693 4.892934 AGAAATGTCCACTTAACAAGCCAA 59.107 37.500 0.00 0.00 0.00 4.52
5317 10694 4.469657 AGAAATGTCCACTTAACAAGCCA 58.530 39.130 0.00 0.00 0.00 4.75
5420 10809 7.289084 ACACCACTTTATTGTCCAATAACCTTT 59.711 33.333 11.07 0.00 41.43 3.11
5443 10832 4.965119 AAAAAGTCTGACTCAACCACAC 57.035 40.909 11.31 0.00 0.00 3.82
5625 11015 1.483827 TGATAGACTTGCCAGCTCCAG 59.516 52.381 0.00 0.00 0.00 3.86
5643 11033 7.187824 AGTCCTATTAAAGACTTGCTCATGA 57.812 36.000 0.00 0.00 40.43 3.07
5646 11036 8.540507 AGATAGTCCTATTAAAGACTTGCTCA 57.459 34.615 10.37 0.00 40.43 4.26
5659 11049 7.072454 TCAACCATGCCTTTAGATAGTCCTATT 59.928 37.037 0.00 0.00 0.00 1.73
5660 11050 6.558775 TCAACCATGCCTTTAGATAGTCCTAT 59.441 38.462 0.00 0.00 0.00 2.57
5680 11111 4.935808 AGAATGTAACCGACTTCATCAACC 59.064 41.667 0.00 0.00 0.00 3.77
5684 11115 4.120589 GGGAGAATGTAACCGACTTCATC 58.879 47.826 0.00 0.00 0.00 2.92
5693 11124 5.048507 CGTAAGCTAAGGGAGAATGTAACC 58.951 45.833 0.00 0.00 0.00 2.85
5715 11146 1.468985 TATTGTTGCCCAATCACCCG 58.531 50.000 2.30 0.00 42.81 5.28
5820 12314 6.817641 TGTAAGATCCGCGTTTTTCCTATTTA 59.182 34.615 4.92 0.00 0.00 1.40
5883 12377 9.000486 GCATGTAAGGTTTAGGAGGATATTTAC 58.000 37.037 0.00 0.00 0.00 2.01
5923 12417 5.183530 TGAATGGAGAGATTGGATGTGTT 57.816 39.130 0.00 0.00 0.00 3.32
5938 12432 2.041485 TGCTGGTGGATCTTTGAATGGA 59.959 45.455 0.00 0.00 0.00 3.41
5943 12437 2.886523 CAGTTTGCTGGTGGATCTTTGA 59.113 45.455 0.00 0.00 39.01 2.69
5949 12443 1.915141 CCTTCAGTTTGCTGGTGGAT 58.085 50.000 0.00 0.00 42.78 3.41
5975 12469 0.539986 TCCGTTATCTCACTTGGGCC 59.460 55.000 0.00 0.00 0.00 5.80
5976 12470 1.480954 TCTCCGTTATCTCACTTGGGC 59.519 52.381 0.00 0.00 0.00 5.36
5998 12497 3.682858 GCACGGCTTCAAGTTTAGTGATA 59.317 43.478 7.53 0.00 0.00 2.15
6005 12504 1.040339 TTGGGCACGGCTTCAAGTTT 61.040 50.000 0.00 0.00 0.00 2.66
6020 12519 2.289819 ACATTTTGATGCAAGCCTTGGG 60.290 45.455 6.57 0.00 0.00 4.12
6037 12536 1.691219 CCCCTGCCCACAGTACATT 59.309 57.895 0.00 0.00 42.81 2.71
6039 12538 3.646715 GCCCCTGCCCACAGTACA 61.647 66.667 0.00 0.00 42.81 2.90
6047 12546 0.688749 AAGATTCAATGCCCCTGCCC 60.689 55.000 0.00 0.00 36.33 5.36
6071 12576 1.273606 CCTTGGACATGACTCGTCAGT 59.726 52.381 0.00 4.31 43.61 3.41
6076 12581 1.804372 GCTAGCCTTGGACATGACTCG 60.804 57.143 2.29 0.00 0.00 4.18
6082 12587 3.589951 ATTGATGCTAGCCTTGGACAT 57.410 42.857 13.29 0.00 0.00 3.06
6086 12591 3.562973 CACAGTATTGATGCTAGCCTTGG 59.437 47.826 13.29 0.00 0.00 3.61
6094 12599 2.304092 CATGCCCACAGTATTGATGCT 58.696 47.619 0.00 0.00 0.00 3.79
6102 12607 2.307392 ACACATAACCATGCCCACAGTA 59.693 45.455 0.00 0.00 35.39 2.74
6113 12618 8.088365 CGGATGAGATAGATTAACACATAACCA 58.912 37.037 0.00 0.00 0.00 3.67
6116 12621 9.078990 AGTCGGATGAGATAGATTAACACATAA 57.921 33.333 0.00 0.00 0.00 1.90
6117 12622 8.515414 CAGTCGGATGAGATAGATTAACACATA 58.485 37.037 0.00 0.00 0.00 2.29
6118 12623 7.374272 CAGTCGGATGAGATAGATTAACACAT 58.626 38.462 0.00 0.00 0.00 3.21
6140 12734 1.622312 GGTCTTACTTCGAACCCCAGT 59.378 52.381 0.00 0.00 0.00 4.00
6193 12788 4.305769 CTGAAGAGCCGGATGAGATTTAG 58.694 47.826 5.05 0.00 0.00 1.85
6219 12814 3.737559 TCCCACTCCATGCACTTAAAT 57.262 42.857 0.00 0.00 0.00 1.40
6225 12820 2.092968 TGTATCTTCCCACTCCATGCAC 60.093 50.000 0.00 0.00 0.00 4.57
6233 12828 6.831664 AAGGAATGTATGTATCTTCCCACT 57.168 37.500 0.00 0.00 38.32 4.00
6234 12829 9.574516 AATTAAGGAATGTATGTATCTTCCCAC 57.425 33.333 0.00 0.00 38.32 4.61
6244 12839 9.401058 CAAGGAGAGAAATTAAGGAATGTATGT 57.599 33.333 0.00 0.00 0.00 2.29
6245 12840 9.401058 ACAAGGAGAGAAATTAAGGAATGTATG 57.599 33.333 0.00 0.00 0.00 2.39
6248 12843 8.606830 ACTACAAGGAGAGAAATTAAGGAATGT 58.393 33.333 0.00 0.00 0.00 2.71
6252 12847 7.554959 ACACTACAAGGAGAGAAATTAAGGA 57.445 36.000 0.00 0.00 0.00 3.36
6298 12904 8.149647 TCGGTCCTTCAATTTAGTACAAACTTA 58.850 33.333 0.00 0.00 37.15 2.24
6304 12910 7.279313 GCTAATTCGGTCCTTCAATTTAGTACA 59.721 37.037 0.00 0.00 0.00 2.90
6306 12912 6.764560 GGCTAATTCGGTCCTTCAATTTAGTA 59.235 38.462 0.00 0.00 0.00 1.82
6308 12914 5.823045 AGGCTAATTCGGTCCTTCAATTTAG 59.177 40.000 0.00 0.00 0.00 1.85
6313 12919 3.713826 AAGGCTAATTCGGTCCTTCAA 57.286 42.857 0.00 0.00 34.00 2.69
6315 12921 4.667519 TCTAAGGCTAATTCGGTCCTTC 57.332 45.455 0.00 0.00 39.45 3.46
6321 12927 7.078228 GCACATAATTTCTAAGGCTAATTCGG 58.922 38.462 0.00 0.00 0.00 4.30
6323 12929 7.940850 TGGCACATAATTTCTAAGGCTAATTC 58.059 34.615 0.00 0.00 0.00 2.17
6328 12935 4.641989 CACTGGCACATAATTTCTAAGGCT 59.358 41.667 0.00 0.00 38.20 4.58
6334 12941 7.886629 ATTCATACACTGGCACATAATTTCT 57.113 32.000 0.00 0.00 38.20 2.52
6335 12942 9.669353 CTTATTCATACACTGGCACATAATTTC 57.331 33.333 0.00 0.00 38.20 2.17
6338 12945 6.772233 TGCTTATTCATACACTGGCACATAAT 59.228 34.615 0.00 0.00 38.20 1.28
6359 12974 8.594550 ACGGAAAATATGGACTATACTATGCTT 58.405 33.333 0.00 0.00 0.00 3.91
6370 12985 4.181578 CGAGAACACGGAAAATATGGACT 58.818 43.478 0.00 0.00 0.00 3.85
6379 12998 2.163818 ATGAAGCGAGAACACGGAAA 57.836 45.000 0.00 0.00 0.00 3.13
6399 13018 4.467198 ACAAGTTACGGCTTAGCTACAT 57.533 40.909 3.59 0.00 0.00 2.29
6407 13026 2.137523 CGTGGTTACAAGTTACGGCTT 58.862 47.619 0.00 0.00 0.00 4.35
6409 13028 1.782044 TCGTGGTTACAAGTTACGGC 58.218 50.000 0.00 0.00 35.63 5.68
6411 13030 8.646356 TGTTTATTATCGTGGTTACAAGTTACG 58.354 33.333 0.00 0.00 36.20 3.18
6414 13033 9.834628 CAATGTTTATTATCGTGGTTACAAGTT 57.165 29.630 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.