Multiple sequence alignment - TraesCS1D01G329800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G329800 chr1D 100.000 5495 0 0 1 5495 420661676 420656182 0.000000e+00 10148
1 TraesCS1D01G329800 chr1D 97.891 806 17 0 1 806 61776848 61776043 0.000000e+00 1395
2 TraesCS1D01G329800 chr1D 97.640 805 19 0 1 805 433019075 433019879 0.000000e+00 1382
3 TraesCS1D01G329800 chr1D 92.551 537 36 3 4963 5495 28241120 28240584 0.000000e+00 767
4 TraesCS1D01G329800 chr1D 92.222 540 38 3 4960 5495 443437761 443437222 0.000000e+00 761
5 TraesCS1D01G329800 chr1D 84.884 516 59 14 819 1319 420748230 420747719 2.280000e-138 503
6 TraesCS1D01G329800 chr1D 87.258 361 34 9 951 1300 420853298 420852939 8.570000e-108 401
7 TraesCS1D01G329800 chr1D 79.956 454 64 17 1463 1899 420747622 420747179 5.350000e-80 309
8 TraesCS1D01G329800 chr1D 79.736 454 65 17 1463 1899 420848237 420847794 2.490000e-78 303
9 TraesCS1D01G329800 chr1D 85.526 152 7 4 2417 2553 420659138 420658987 1.600000e-30 145
10 TraesCS1D01G329800 chr1D 85.526 152 7 4 2539 2690 420659260 420659124 1.600000e-30 145
11 TraesCS1D01G329800 chr1A 94.004 1551 79 9 812 2360 517106258 517104720 0.000000e+00 2337
12 TraesCS1D01G329800 chr1A 88.938 904 66 24 3969 4858 517102642 517101759 0.000000e+00 1085
13 TraesCS1D01G329800 chr1A 91.425 723 34 8 3110 3822 517104094 517103390 0.000000e+00 966
14 TraesCS1D01G329800 chr1A 92.751 538 36 2 4961 5495 100689732 100690269 0.000000e+00 774
15 TraesCS1D01G329800 chr1A 80.041 972 129 40 968 1899 517188515 517187569 0.000000e+00 660
16 TraesCS1D01G329800 chr1A 91.099 191 17 0 2898 3088 517104405 517104215 5.460000e-65 259
17 TraesCS1D01G329800 chr1B 87.927 1317 77 33 2544 3838 568970954 568969698 0.000000e+00 1476
18 TraesCS1D01G329800 chr1B 87.462 1308 99 36 1262 2553 568972073 568970815 0.000000e+00 1447
19 TraesCS1D01G329800 chr1B 91.183 930 56 11 3910 4829 568969069 568968156 0.000000e+00 1240
20 TraesCS1D01G329800 chr1B 94.708 359 7 4 842 1198 568972755 568972407 1.040000e-151 547
21 TraesCS1D01G329800 chr1B 85.288 503 46 14 819 1303 569543288 569542796 1.380000e-135 494
22 TraesCS1D01G329800 chr2D 98.012 805 16 0 1 805 207548097 207548901 0.000000e+00 1399
23 TraesCS1D01G329800 chr2D 94.783 805 18 7 1 805 414963302 414962522 0.000000e+00 1232
24 TraesCS1D01G329800 chr6B 96.278 806 25 3 1 805 708053894 708054695 0.000000e+00 1317
25 TraesCS1D01G329800 chr2A 96.044 809 30 2 1 808 575886235 575885428 0.000000e+00 1315
26 TraesCS1D01G329800 chr2A 95.539 807 28 4 1 806 293900250 293901049 0.000000e+00 1284
27 TraesCS1D01G329800 chr2A 92.193 538 39 2 4961 5495 22562259 22562796 0.000000e+00 758
28 TraesCS1D01G329800 chr4A 94.296 824 41 6 1 822 713131143 713130324 0.000000e+00 1256
29 TraesCS1D01G329800 chr7B 94.548 807 41 3 1 805 164693736 164694541 0.000000e+00 1243
30 TraesCS1D01G329800 chr7A 95.378 714 30 3 1 712 71230885 71230173 0.000000e+00 1133
31 TraesCS1D01G329800 chr6D 94.622 502 26 1 4995 5495 470107806 470107305 0.000000e+00 776
32 TraesCS1D01G329800 chr6D 91.822 538 43 1 4959 5495 281870153 281869616 0.000000e+00 749
33 TraesCS1D01G329800 chr4B 92.871 533 37 1 4962 5493 45492201 45492733 0.000000e+00 773
34 TraesCS1D01G329800 chr2B 92.537 536 39 1 4961 5495 698224504 698225039 0.000000e+00 767
35 TraesCS1D01G329800 chrUn 91.651 539 41 3 4961 5495 319766569 319767107 0.000000e+00 743


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G329800 chr1D 420656182 420661676 5494 True 3479.333333 10148 90.350667 1 5495 3 chr1D.!!$R6 5494
1 TraesCS1D01G329800 chr1D 61776043 61776848 805 True 1395.000000 1395 97.891000 1 806 1 chr1D.!!$R2 805
2 TraesCS1D01G329800 chr1D 433019075 433019879 804 False 1382.000000 1382 97.640000 1 805 1 chr1D.!!$F1 804
3 TraesCS1D01G329800 chr1D 28240584 28241120 536 True 767.000000 767 92.551000 4963 5495 1 chr1D.!!$R1 532
4 TraesCS1D01G329800 chr1D 443437222 443437761 539 True 761.000000 761 92.222000 4960 5495 1 chr1D.!!$R5 535
5 TraesCS1D01G329800 chr1D 420747179 420748230 1051 True 406.000000 503 82.420000 819 1899 2 chr1D.!!$R7 1080
6 TraesCS1D01G329800 chr1A 517101759 517106258 4499 True 1161.750000 2337 91.366500 812 4858 4 chr1A.!!$R2 4046
7 TraesCS1D01G329800 chr1A 100689732 100690269 537 False 774.000000 774 92.751000 4961 5495 1 chr1A.!!$F1 534
8 TraesCS1D01G329800 chr1A 517187569 517188515 946 True 660.000000 660 80.041000 968 1899 1 chr1A.!!$R1 931
9 TraesCS1D01G329800 chr1B 568968156 568972755 4599 True 1177.500000 1476 90.320000 842 4829 4 chr1B.!!$R2 3987
10 TraesCS1D01G329800 chr2D 207548097 207548901 804 False 1399.000000 1399 98.012000 1 805 1 chr2D.!!$F1 804
11 TraesCS1D01G329800 chr2D 414962522 414963302 780 True 1232.000000 1232 94.783000 1 805 1 chr2D.!!$R1 804
12 TraesCS1D01G329800 chr6B 708053894 708054695 801 False 1317.000000 1317 96.278000 1 805 1 chr6B.!!$F1 804
13 TraesCS1D01G329800 chr2A 575885428 575886235 807 True 1315.000000 1315 96.044000 1 808 1 chr2A.!!$R1 807
14 TraesCS1D01G329800 chr2A 293900250 293901049 799 False 1284.000000 1284 95.539000 1 806 1 chr2A.!!$F2 805
15 TraesCS1D01G329800 chr2A 22562259 22562796 537 False 758.000000 758 92.193000 4961 5495 1 chr2A.!!$F1 534
16 TraesCS1D01G329800 chr4A 713130324 713131143 819 True 1256.000000 1256 94.296000 1 822 1 chr4A.!!$R1 821
17 TraesCS1D01G329800 chr7B 164693736 164694541 805 False 1243.000000 1243 94.548000 1 805 1 chr7B.!!$F1 804
18 TraesCS1D01G329800 chr7A 71230173 71230885 712 True 1133.000000 1133 95.378000 1 712 1 chr7A.!!$R1 711
19 TraesCS1D01G329800 chr6D 470107305 470107806 501 True 776.000000 776 94.622000 4995 5495 1 chr6D.!!$R2 500
20 TraesCS1D01G329800 chr6D 281869616 281870153 537 True 749.000000 749 91.822000 4959 5495 1 chr6D.!!$R1 536
21 TraesCS1D01G329800 chr4B 45492201 45492733 532 False 773.000000 773 92.871000 4962 5493 1 chr4B.!!$F1 531
22 TraesCS1D01G329800 chr2B 698224504 698225039 535 False 767.000000 767 92.537000 4961 5495 1 chr2B.!!$F1 534
23 TraesCS1D01G329800 chrUn 319766569 319767107 538 False 743.000000 743 91.651000 4961 5495 1 chrUn.!!$F1 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
469 472 1.614413 GAGAGGGCGACGATAAGGATT 59.386 52.381 0.00 0.00 0.00 3.01 F
1029 1059 0.039911 AGGCGAAGTACCTGGAGACT 59.960 55.000 0.00 0.00 35.72 3.24 F
1475 1784 0.747255 TCGCAAGCTAGGCTAGGAAG 59.253 55.000 22.40 0.20 38.25 3.46 F
2518 2853 0.042708 CGTGCGAGCATAGAACATGC 60.043 55.000 0.00 0.95 44.85 4.06 F
2520 2855 0.107752 TGCGAGCATAGAACATGCCA 60.108 50.000 5.64 0.00 45.59 4.92 F
2944 3382 0.320374 TGCTTTAGTCTGTGGGGACG 59.680 55.000 0.00 0.00 40.76 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2301 2634 0.386113 TACGGTGCAAAAGGTTTGGC 59.614 50.0 0.00 0.0 37.62 4.52 R
2499 2834 0.042708 GCATGTTCTATGCTCGCACG 60.043 55.0 4.73 0.0 41.52 5.34 R
3407 3981 0.038166 GTGCCACTCCAAGAATCCCA 59.962 55.0 0.00 0.0 0.00 4.37 R
3408 3982 0.038166 TGTGCCACTCCAAGAATCCC 59.962 55.0 0.00 0.0 0.00 3.85 R
4238 5421 0.107456 CTGCTAACGATGCCAGGGAT 59.893 55.0 0.00 0.0 0.00 3.85 R
4551 5746 0.317160 AGACAACTCATCGTTCCGCA 59.683 50.0 0.00 0.0 32.27 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.572104 CAAGTTGTAGTAGCCCCTTCCT 59.428 50.000 0.00 0.00 0.00 3.36
62 63 9.192642 GTAGCCCCTTCCTTTATAAATGTTTTA 57.807 33.333 0.00 0.00 0.00 1.52
469 472 1.614413 GAGAGGGCGACGATAAGGATT 59.386 52.381 0.00 0.00 0.00 3.01
694 703 1.894466 TGATGTCCAAACATGCCCAAG 59.106 47.619 0.00 0.00 46.20 3.61
713 722 6.547510 GCCCAAGTATACAAGGAAGAAATGAT 59.452 38.462 13.48 0.00 0.00 2.45
809 818 2.099756 ACGGGCGGTGTACTAGTTAATC 59.900 50.000 0.00 0.00 0.00 1.75
810 819 2.735823 GGGCGGTGTACTAGTTAATCG 58.264 52.381 0.00 3.05 0.00 3.34
830 839 5.440234 TCGATAATGTCTCTGCTCTTACC 57.560 43.478 0.00 0.00 0.00 2.85
953 973 4.524318 CCACCGAACGATCCCCCG 62.524 72.222 0.00 0.00 0.00 5.73
955 975 3.455469 ACCGAACGATCCCCCGAC 61.455 66.667 0.00 0.00 0.00 4.79
956 976 4.217159 CCGAACGATCCCCCGACC 62.217 72.222 0.00 0.00 0.00 4.79
957 977 4.217159 CGAACGATCCCCCGACCC 62.217 72.222 0.00 0.00 0.00 4.46
958 978 3.858225 GAACGATCCCCCGACCCC 61.858 72.222 0.00 0.00 0.00 4.95
1029 1059 0.039911 AGGCGAAGTACCTGGAGACT 59.960 55.000 0.00 0.00 35.72 3.24
1367 1674 6.601613 TGTTTTAATCAGGTAGCATTAGGTGG 59.398 38.462 0.00 0.00 0.00 4.61
1377 1684 4.574674 AGCATTAGGTGGTTGATGAGAA 57.425 40.909 0.00 0.00 34.12 2.87
1378 1685 5.121380 AGCATTAGGTGGTTGATGAGAAT 57.879 39.130 0.00 0.00 34.12 2.40
1389 1696 9.778741 GGTGGTTGATGAGAATATAAACTATGA 57.221 33.333 0.00 0.00 0.00 2.15
1420 1728 2.753989 TGTGCTCATGAACAACAACG 57.246 45.000 0.00 0.00 0.00 4.10
1435 1744 4.447724 ACAACAACGCGCCTTCTATATATG 59.552 41.667 5.73 0.00 0.00 1.78
1439 1748 5.577164 ACAACGCGCCTTCTATATATGATTC 59.423 40.000 5.73 0.00 0.00 2.52
1456 1765 4.148838 TGATTCGGGGATTTGTTTGAGTT 58.851 39.130 0.00 0.00 0.00 3.01
1475 1784 0.747255 TCGCAAGCTAGGCTAGGAAG 59.253 55.000 22.40 0.20 38.25 3.46
1521 1830 8.183536 TGAACTGCAGCATATAGTTTGTTAATG 58.816 33.333 15.27 0.00 34.99 1.90
1541 1850 2.158914 TGGATGATGAAGTCGATGGGTG 60.159 50.000 0.00 0.00 0.00 4.61
1802 2129 5.351233 TTGTGGTGCTTATTGTTCTTACG 57.649 39.130 0.00 0.00 0.00 3.18
1940 2267 6.925718 TGTGTGTTTTCTCTGAGACTAATCAG 59.074 38.462 6.92 0.00 46.70 2.90
1969 2296 5.242838 TGAAACAAATTCCCTGCTCGTTATT 59.757 36.000 0.00 0.00 37.22 1.40
1983 2310 5.815222 TGCTCGTTATTATTGTAGTGCATGT 59.185 36.000 0.00 0.00 0.00 3.21
1991 2318 6.816134 TTATTGTAGTGCATGTGTCAATGT 57.184 33.333 0.00 0.00 0.00 2.71
2151 2478 4.826733 TGTGGAAACAGTCAAATATGCTGT 59.173 37.500 0.00 0.00 44.46 4.40
2226 2553 4.948608 TTCTACAAGAGAGCTAGACACG 57.051 45.455 0.00 0.00 34.93 4.49
2227 2554 3.940319 TCTACAAGAGAGCTAGACACGT 58.060 45.455 0.00 0.00 0.00 4.49
2230 2557 1.068264 CAAGAGAGCTAGACACGTGCA 60.068 52.381 17.22 0.00 0.00 4.57
2243 2570 3.843999 ACACGTGCACTTCAAATGTTTT 58.156 36.364 17.22 0.00 0.00 2.43
2301 2634 4.247267 ACATCTGCAAATGGTTTCAGTG 57.753 40.909 4.77 0.00 0.00 3.66
2351 2684 7.173218 TGAGAAATGAATCCACACAGTTACTTC 59.827 37.037 0.00 0.00 0.00 3.01
2387 2720 6.913170 TCTGACTTGAATGATTTAGTTTGGC 58.087 36.000 0.00 0.00 0.00 4.52
2388 2721 6.489700 TCTGACTTGAATGATTTAGTTTGGCA 59.510 34.615 0.00 0.00 0.00 4.92
2389 2722 7.177216 TCTGACTTGAATGATTTAGTTTGGCAT 59.823 33.333 0.00 0.00 0.00 4.40
2390 2723 7.092079 TGACTTGAATGATTTAGTTTGGCATG 58.908 34.615 0.00 0.00 0.00 4.06
2391 2724 6.996509 ACTTGAATGATTTAGTTTGGCATGT 58.003 32.000 0.00 0.00 0.00 3.21
2392 2725 8.121305 ACTTGAATGATTTAGTTTGGCATGTA 57.879 30.769 0.00 0.00 0.00 2.29
2393 2726 8.752187 ACTTGAATGATTTAGTTTGGCATGTAT 58.248 29.630 0.00 0.00 0.00 2.29
2394 2727 8.929827 TTGAATGATTTAGTTTGGCATGTATG 57.070 30.769 0.00 0.00 0.00 2.39
2395 2728 7.490840 TGAATGATTTAGTTTGGCATGTATGG 58.509 34.615 0.00 0.00 0.00 2.74
2396 2729 7.341512 TGAATGATTTAGTTTGGCATGTATGGA 59.658 33.333 0.00 0.00 0.00 3.41
2397 2730 7.844493 ATGATTTAGTTTGGCATGTATGGAT 57.156 32.000 0.00 0.00 0.00 3.41
2398 2731 7.658525 TGATTTAGTTTGGCATGTATGGATT 57.341 32.000 0.00 0.00 0.00 3.01
2399 2732 8.076910 TGATTTAGTTTGGCATGTATGGATTT 57.923 30.769 0.00 0.00 0.00 2.17
2400 2733 8.538701 TGATTTAGTTTGGCATGTATGGATTTT 58.461 29.630 0.00 0.00 0.00 1.82
2401 2734 8.947055 ATTTAGTTTGGCATGTATGGATTTTC 57.053 30.769 0.00 0.00 0.00 2.29
2402 2735 7.716799 TTAGTTTGGCATGTATGGATTTTCT 57.283 32.000 0.00 0.00 0.00 2.52
2403 2736 5.969423 AGTTTGGCATGTATGGATTTTCTG 58.031 37.500 0.00 0.00 0.00 3.02
2404 2737 5.716228 AGTTTGGCATGTATGGATTTTCTGA 59.284 36.000 0.00 0.00 0.00 3.27
2405 2738 6.381994 AGTTTGGCATGTATGGATTTTCTGAT 59.618 34.615 0.00 0.00 0.00 2.90
2414 2747 8.706492 TGTATGGATTTTCTGATTTTGATTGC 57.294 30.769 0.00 0.00 0.00 3.56
2416 2749 7.605410 ATGGATTTTCTGATTTTGATTGCAC 57.395 32.000 0.00 0.00 0.00 4.57
2417 2750 6.761312 TGGATTTTCTGATTTTGATTGCACT 58.239 32.000 0.00 0.00 0.00 4.40
2419 2752 8.030692 TGGATTTTCTGATTTTGATTGCACTAG 58.969 33.333 0.00 0.00 0.00 2.57
2436 2769 4.437239 CACTAGTTGGGCTATCTGTTGAG 58.563 47.826 0.00 0.00 0.00 3.02
2461 2794 9.125026 AGTTTTAATGATAGTGATTGTCCCATC 57.875 33.333 0.00 0.00 0.00 3.51
2499 2834 4.277672 ACCCTTTTCTTCTAAAAAGTCGCC 59.722 41.667 7.97 0.00 42.23 5.54
2514 2849 3.006706 GCCGTGCGAGCATAGAAC 58.993 61.111 0.00 0.00 0.00 3.01
2515 2850 1.809619 GCCGTGCGAGCATAGAACA 60.810 57.895 0.00 0.00 0.00 3.18
2516 2851 1.154205 GCCGTGCGAGCATAGAACAT 61.154 55.000 0.00 0.00 0.00 2.71
2517 2852 0.578683 CCGTGCGAGCATAGAACATG 59.421 55.000 0.00 0.00 0.00 3.21
2518 2853 0.042708 CGTGCGAGCATAGAACATGC 60.043 55.000 0.00 0.95 44.85 4.06
2519 2854 0.305922 GTGCGAGCATAGAACATGCC 59.694 55.000 0.00 0.00 45.59 4.40
2520 2855 0.107752 TGCGAGCATAGAACATGCCA 60.108 50.000 5.64 0.00 45.59 4.92
2521 2856 1.233019 GCGAGCATAGAACATGCCAT 58.767 50.000 5.64 0.00 45.59 4.40
2522 2857 2.224257 TGCGAGCATAGAACATGCCATA 60.224 45.455 5.64 0.00 45.59 2.74
2523 2858 3.005554 GCGAGCATAGAACATGCCATAT 58.994 45.455 5.64 0.00 45.59 1.78
2524 2859 4.183865 GCGAGCATAGAACATGCCATATA 58.816 43.478 5.64 0.00 45.59 0.86
2525 2860 4.813161 GCGAGCATAGAACATGCCATATAT 59.187 41.667 5.64 0.00 45.59 0.86
2526 2861 5.295292 GCGAGCATAGAACATGCCATATATT 59.705 40.000 5.64 0.00 45.59 1.28
2527 2862 6.183360 GCGAGCATAGAACATGCCATATATTT 60.183 38.462 5.64 0.00 45.59 1.40
2528 2863 7.184779 CGAGCATAGAACATGCCATATATTTG 58.815 38.462 5.64 0.00 45.59 2.32
2529 2864 7.148356 CGAGCATAGAACATGCCATATATTTGT 60.148 37.037 5.64 0.00 45.59 2.83
2530 2865 7.823665 AGCATAGAACATGCCATATATTTGTG 58.176 34.615 5.64 0.00 45.59 3.33
2531 2866 7.666804 AGCATAGAACATGCCATATATTTGTGA 59.333 33.333 5.64 0.00 45.59 3.58
2532 2867 8.298854 GCATAGAACATGCCATATATTTGTGAA 58.701 33.333 0.00 0.00 39.01 3.18
2536 2871 9.537192 AGAACATGCCATATATTTGTGAATTTG 57.463 29.630 0.00 0.00 0.00 2.32
2537 2872 9.316730 GAACATGCCATATATTTGTGAATTTGT 57.683 29.630 0.00 0.00 0.00 2.83
2538 2873 8.876275 ACATGCCATATATTTGTGAATTTGTC 57.124 30.769 0.00 0.00 0.00 3.18
2539 2874 8.698210 ACATGCCATATATTTGTGAATTTGTCT 58.302 29.630 0.00 0.00 0.00 3.41
2547 2882 8.931385 ATATTTGTGAATTTGTCTATGTTGGC 57.069 30.769 0.00 0.00 0.00 4.52
2548 2883 4.782019 TGTGAATTTGTCTATGTTGGCC 57.218 40.909 0.00 0.00 0.00 5.36
2549 2884 4.406456 TGTGAATTTGTCTATGTTGGCCT 58.594 39.130 3.32 0.00 0.00 5.19
2550 2885 5.565509 TGTGAATTTGTCTATGTTGGCCTA 58.434 37.500 3.32 0.00 0.00 3.93
2551 2886 6.186957 TGTGAATTTGTCTATGTTGGCCTAT 58.813 36.000 3.32 0.00 0.00 2.57
2552 2887 6.663093 TGTGAATTTGTCTATGTTGGCCTATT 59.337 34.615 3.32 0.00 0.00 1.73
2553 2888 7.178274 TGTGAATTTGTCTATGTTGGCCTATTT 59.822 33.333 3.32 0.00 0.00 1.40
2554 2889 7.489113 GTGAATTTGTCTATGTTGGCCTATTTG 59.511 37.037 3.32 0.00 0.00 2.32
2555 2890 4.981806 TTGTCTATGTTGGCCTATTTGC 57.018 40.909 3.32 0.00 0.00 3.68
2556 2891 4.235079 TGTCTATGTTGGCCTATTTGCT 57.765 40.909 3.32 0.00 0.00 3.91
2557 2892 4.599041 TGTCTATGTTGGCCTATTTGCTT 58.401 39.130 3.32 0.00 0.00 3.91
2558 2893 5.750524 TGTCTATGTTGGCCTATTTGCTTA 58.249 37.500 3.32 0.00 0.00 3.09
2559 2894 5.822519 TGTCTATGTTGGCCTATTTGCTTAG 59.177 40.000 3.32 0.00 0.00 2.18
2560 2895 6.055588 GTCTATGTTGGCCTATTTGCTTAGA 58.944 40.000 3.32 0.00 0.00 2.10
2561 2896 6.542370 GTCTATGTTGGCCTATTTGCTTAGAA 59.458 38.462 3.32 0.00 0.00 2.10
2562 2897 7.229506 GTCTATGTTGGCCTATTTGCTTAGAAT 59.770 37.037 3.32 0.00 0.00 2.40
2563 2898 6.796785 ATGTTGGCCTATTTGCTTAGAATT 57.203 33.333 3.32 0.00 0.00 2.17
2564 2899 6.603940 TGTTGGCCTATTTGCTTAGAATTT 57.396 33.333 3.32 0.00 0.00 1.82
2565 2900 7.003402 TGTTGGCCTATTTGCTTAGAATTTT 57.997 32.000 3.32 0.00 0.00 1.82
2566 2901 8.128322 TGTTGGCCTATTTGCTTAGAATTTTA 57.872 30.769 3.32 0.00 0.00 1.52
2567 2902 8.589338 TGTTGGCCTATTTGCTTAGAATTTTAA 58.411 29.630 3.32 0.00 0.00 1.52
2568 2903 9.599866 GTTGGCCTATTTGCTTAGAATTTTAAT 57.400 29.630 3.32 0.00 0.00 1.40
2569 2904 9.598517 TTGGCCTATTTGCTTAGAATTTTAATG 57.401 29.630 3.32 0.00 0.00 1.90
2570 2905 8.976353 TGGCCTATTTGCTTAGAATTTTAATGA 58.024 29.630 3.32 0.00 0.00 2.57
2571 2906 9.987272 GGCCTATTTGCTTAGAATTTTAATGAT 57.013 29.630 0.00 0.00 0.00 2.45
2584 2919 9.699410 AGAATTTTAATGATAGTGATTGTCCCA 57.301 29.630 0.00 0.00 0.00 4.37
2587 2922 9.872684 ATTTTAATGATAGTGATTGTCCCATCT 57.127 29.630 0.00 0.00 0.00 2.90
2588 2923 9.699410 TTTTAATGATAGTGATTGTCCCATCTT 57.301 29.630 0.00 0.00 0.00 2.40
2589 2924 8.908786 TTAATGATAGTGATTGTCCCATCTTC 57.091 34.615 0.00 0.00 0.00 2.87
2590 2925 5.955961 TGATAGTGATTGTCCCATCTTCA 57.044 39.130 0.00 0.00 0.00 3.02
2591 2926 6.505048 TGATAGTGATTGTCCCATCTTCAT 57.495 37.500 0.00 0.00 0.00 2.57
2592 2927 7.616528 TGATAGTGATTGTCCCATCTTCATA 57.383 36.000 0.00 0.00 0.00 2.15
2593 2928 8.033178 TGATAGTGATTGTCCCATCTTCATAA 57.967 34.615 0.00 0.00 0.00 1.90
2594 2929 8.663167 TGATAGTGATTGTCCCATCTTCATAAT 58.337 33.333 0.00 0.00 0.00 1.28
2595 2930 9.512588 GATAGTGATTGTCCCATCTTCATAATT 57.487 33.333 0.00 0.00 0.00 1.40
2596 2931 9.872684 ATAGTGATTGTCCCATCTTCATAATTT 57.127 29.630 0.00 0.00 0.00 1.82
2597 2932 8.599624 AGTGATTGTCCCATCTTCATAATTTT 57.400 30.769 0.00 0.00 0.00 1.82
2598 2933 8.472413 AGTGATTGTCCCATCTTCATAATTTTG 58.528 33.333 0.00 0.00 0.00 2.44
2599 2934 8.469200 GTGATTGTCCCATCTTCATAATTTTGA 58.531 33.333 0.00 0.00 0.00 2.69
2600 2935 9.204337 TGATTGTCCCATCTTCATAATTTTGAT 57.796 29.630 0.00 0.00 0.00 2.57
2603 2938 8.463930 TGTCCCATCTTCATAATTTTGATACC 57.536 34.615 0.00 0.00 0.00 2.73
2604 2939 7.505585 TGTCCCATCTTCATAATTTTGATACCC 59.494 37.037 0.00 0.00 0.00 3.69
2605 2940 7.725844 GTCCCATCTTCATAATTTTGATACCCT 59.274 37.037 0.00 0.00 0.00 4.34
2606 2941 7.725397 TCCCATCTTCATAATTTTGATACCCTG 59.275 37.037 0.00 0.00 0.00 4.45
2607 2942 7.506938 CCCATCTTCATAATTTTGATACCCTGT 59.493 37.037 0.00 0.00 0.00 4.00
2608 2943 8.571336 CCATCTTCATAATTTTGATACCCTGTC 58.429 37.037 0.00 0.00 0.00 3.51
2609 2944 8.571336 CATCTTCATAATTTTGATACCCTGTCC 58.429 37.037 0.00 0.00 0.00 4.02
2610 2945 7.872138 TCTTCATAATTTTGATACCCTGTCCT 58.128 34.615 0.00 0.00 0.00 3.85
2611 2946 8.336235 TCTTCATAATTTTGATACCCTGTCCTT 58.664 33.333 0.00 0.00 0.00 3.36
2612 2947 8.519799 TTCATAATTTTGATACCCTGTCCTTC 57.480 34.615 0.00 0.00 0.00 3.46
2613 2948 7.872138 TCATAATTTTGATACCCTGTCCTTCT 58.128 34.615 0.00 0.00 0.00 2.85
2614 2949 8.998814 TCATAATTTTGATACCCTGTCCTTCTA 58.001 33.333 0.00 0.00 0.00 2.10
2615 2950 9.627123 CATAATTTTGATACCCTGTCCTTCTAA 57.373 33.333 0.00 0.00 0.00 2.10
2617 2952 8.950007 AATTTTGATACCCTGTCCTTCTAAAA 57.050 30.769 0.00 0.00 0.00 1.52
2618 2953 9.547279 AATTTTGATACCCTGTCCTTCTAAAAT 57.453 29.630 0.00 0.00 0.00 1.82
2619 2954 7.938140 TTTGATACCCTGTCCTTCTAAAATG 57.062 36.000 0.00 0.00 0.00 2.32
2620 2955 6.636454 TGATACCCTGTCCTTCTAAAATGT 57.364 37.500 0.00 0.00 0.00 2.71
2621 2956 6.650120 TGATACCCTGTCCTTCTAAAATGTC 58.350 40.000 0.00 0.00 0.00 3.06
2622 2957 3.939066 ACCCTGTCCTTCTAAAATGTCG 58.061 45.455 0.00 0.00 0.00 4.35
2623 2958 2.678336 CCCTGTCCTTCTAAAATGTCGC 59.322 50.000 0.00 0.00 0.00 5.19
2624 2959 2.678336 CCTGTCCTTCTAAAATGTCGCC 59.322 50.000 0.00 0.00 0.00 5.54
2625 2960 2.343101 TGTCCTTCTAAAATGTCGCCG 58.657 47.619 0.00 0.00 0.00 6.46
2626 2961 2.289195 TGTCCTTCTAAAATGTCGCCGT 60.289 45.455 0.00 0.00 0.00 5.68
2627 2962 2.093783 GTCCTTCTAAAATGTCGCCGTG 59.906 50.000 0.00 0.00 0.00 4.94
2628 2963 1.202031 CCTTCTAAAATGTCGCCGTGC 60.202 52.381 0.00 0.00 0.00 5.34
2650 2985 3.941483 CGAGCATAGAACATTCCACCTTT 59.059 43.478 0.00 0.00 0.00 3.11
2668 3003 9.527157 TCCACCTTTTTCTTCATATATTTGTGA 57.473 29.630 0.00 0.00 0.00 3.58
2692 3027 7.831690 TGAATTTGTCTATGTTGGCCTATTGTA 59.168 33.333 3.32 0.00 0.00 2.41
2730 3065 8.871629 TTCTAAGCAATATTCTAAACCCACAA 57.128 30.769 0.00 0.00 0.00 3.33
2731 3066 8.276252 TCTAAGCAATATTCTAAACCCACAAC 57.724 34.615 0.00 0.00 0.00 3.32
2732 3067 5.914898 AGCAATATTCTAAACCCACAACC 57.085 39.130 0.00 0.00 0.00 3.77
2733 3068 5.329399 AGCAATATTCTAAACCCACAACCA 58.671 37.500 0.00 0.00 0.00 3.67
2734 3069 5.185056 AGCAATATTCTAAACCCACAACCAC 59.815 40.000 0.00 0.00 0.00 4.16
2754 3089 7.839680 ACCACAAGTTTCAGGATTTAGAATT 57.160 32.000 0.00 0.00 0.00 2.17
2781 3135 8.144862 ACTAGTGTAGTAGTAGTAGGTGTCTT 57.855 38.462 0.00 0.00 42.42 3.01
2798 3152 4.022416 GTGTCTTGGTGGTGATTGCATTTA 60.022 41.667 0.00 0.00 0.00 1.40
2807 3163 6.038356 GTGGTGATTGCATTTATTCCAAGAG 58.962 40.000 0.00 0.00 0.00 2.85
2810 3166 7.395772 TGGTGATTGCATTTATTCCAAGAGTAA 59.604 33.333 0.00 0.00 0.00 2.24
2859 3297 7.064134 TGTCTAGCATGTATTTTGGTTCTTACG 59.936 37.037 0.00 0.00 0.00 3.18
2865 3303 7.220108 GCATGTATTTTGGTTCTTACGGAATTC 59.780 37.037 0.00 0.00 36.24 2.17
2871 3309 6.978343 TTGGTTCTTACGGAATTCATGTAG 57.022 37.500 7.93 0.00 36.24 2.74
2872 3310 4.873827 TGGTTCTTACGGAATTCATGTAGC 59.126 41.667 7.93 1.14 36.24 3.58
2875 3313 6.759827 GGTTCTTACGGAATTCATGTAGCTTA 59.240 38.462 7.93 0.00 36.24 3.09
2877 3315 6.513180 TCTTACGGAATTCATGTAGCTTAGG 58.487 40.000 7.93 0.00 0.00 2.69
2878 3316 6.322969 TCTTACGGAATTCATGTAGCTTAGGA 59.677 38.462 7.93 0.00 0.00 2.94
2879 3317 4.950050 ACGGAATTCATGTAGCTTAGGAG 58.050 43.478 7.93 0.00 0.00 3.69
2880 3318 4.406003 ACGGAATTCATGTAGCTTAGGAGT 59.594 41.667 7.93 0.00 0.00 3.85
2881 3319 5.104900 ACGGAATTCATGTAGCTTAGGAGTT 60.105 40.000 7.93 0.00 0.00 3.01
2882 3320 5.817816 CGGAATTCATGTAGCTTAGGAGTTT 59.182 40.000 7.93 0.00 0.00 2.66
2883 3321 6.316390 CGGAATTCATGTAGCTTAGGAGTTTT 59.684 38.462 7.93 0.00 0.00 2.43
2884 3322 7.148239 CGGAATTCATGTAGCTTAGGAGTTTTT 60.148 37.037 7.93 0.00 0.00 1.94
2885 3323 8.184848 GGAATTCATGTAGCTTAGGAGTTTTTC 58.815 37.037 7.93 0.00 0.00 2.29
2886 3324 8.870075 AATTCATGTAGCTTAGGAGTTTTTCT 57.130 30.769 0.00 0.00 0.00 2.52
2887 3325 8.870075 ATTCATGTAGCTTAGGAGTTTTTCTT 57.130 30.769 0.00 0.00 0.00 2.52
2888 3326 7.672983 TCATGTAGCTTAGGAGTTTTTCTTG 57.327 36.000 0.00 0.00 0.00 3.02
2889 3327 7.224297 TCATGTAGCTTAGGAGTTTTTCTTGT 58.776 34.615 0.00 0.00 0.00 3.16
2890 3328 6.861065 TGTAGCTTAGGAGTTTTTCTTGTG 57.139 37.500 0.00 0.00 0.00 3.33
2891 3329 6.354130 TGTAGCTTAGGAGTTTTTCTTGTGT 58.646 36.000 0.00 0.00 0.00 3.72
2892 3330 7.502696 TGTAGCTTAGGAGTTTTTCTTGTGTA 58.497 34.615 0.00 0.00 0.00 2.90
2893 3331 8.154856 TGTAGCTTAGGAGTTTTTCTTGTGTAT 58.845 33.333 0.00 0.00 0.00 2.29
2894 3332 7.440523 AGCTTAGGAGTTTTTCTTGTGTATG 57.559 36.000 0.00 0.00 0.00 2.39
2895 3333 6.998673 AGCTTAGGAGTTTTTCTTGTGTATGT 59.001 34.615 0.00 0.00 0.00 2.29
2896 3334 8.154856 AGCTTAGGAGTTTTTCTTGTGTATGTA 58.845 33.333 0.00 0.00 0.00 2.29
2900 3338 8.691661 AGGAGTTTTTCTTGTGTATGTATTGT 57.308 30.769 0.00 0.00 0.00 2.71
2909 3347 6.995686 TCTTGTGTATGTATTGTCCAGTGTTT 59.004 34.615 0.00 0.00 0.00 2.83
2917 3355 4.584327 ATTGTCCAGTGTTTTGTTAGGC 57.416 40.909 0.00 0.00 0.00 3.93
2944 3382 0.320374 TGCTTTAGTCTGTGGGGACG 59.680 55.000 0.00 0.00 40.76 4.79
2951 3389 1.764134 AGTCTGTGGGGACGTTTTACA 59.236 47.619 0.00 0.00 40.76 2.41
2958 3396 5.071370 TGTGGGGACGTTTTACATAATTGT 58.929 37.500 0.00 0.00 39.98 2.71
2994 3432 1.486310 TGCATAGTGCCTTCGATTCCT 59.514 47.619 0.00 0.00 44.23 3.36
3022 3460 6.165577 ACCTCAATAAACATTGCCATCAAAC 58.834 36.000 0.00 0.00 35.56 2.93
3023 3461 6.164876 CCTCAATAAACATTGCCATCAAACA 58.835 36.000 0.00 0.00 35.56 2.83
3046 3484 5.074584 TGGTGTAGTTTTGGGTTGTTTTC 57.925 39.130 0.00 0.00 0.00 2.29
3066 3504 2.842496 TCCCATGCAATCTTCTCTCTGT 59.158 45.455 0.00 0.00 0.00 3.41
3083 3521 4.576053 TCTCTGTGGTGATGTTCTGTTTTG 59.424 41.667 0.00 0.00 0.00 2.44
3093 3531 6.005823 TGATGTTCTGTTTTGACTCCATCAT 58.994 36.000 0.00 0.00 37.11 2.45
3096 3534 6.295249 TGTTCTGTTTTGACTCCATCATGTA 58.705 36.000 0.00 0.00 37.11 2.29
3107 3545 9.474920 TTGACTCCATCATGTAAAATTTGAAAC 57.525 29.630 0.00 0.00 37.11 2.78
3108 3651 8.637099 TGACTCCATCATGTAAAATTTGAAACA 58.363 29.630 0.00 0.00 29.99 2.83
3130 3673 6.417258 ACATATGAGATGTCAATGTTCACCA 58.583 36.000 10.38 0.00 35.88 4.17
3152 3695 0.731417 CTCCCTGAGCGATTTTGCAG 59.269 55.000 0.00 0.00 37.31 4.41
3158 3701 3.611113 CCTGAGCGATTTTGCAGAATTTG 59.389 43.478 3.69 1.83 37.31 2.32
3248 3804 2.847327 ACTTGCTGAGCTGCTTCTAA 57.153 45.000 5.83 0.00 0.00 2.10
3299 3855 3.517612 ACCCTAACCTGCTAACTTCAGA 58.482 45.455 0.00 0.00 33.54 3.27
3308 3864 2.170607 TGCTAACTTCAGATGGCCTACC 59.829 50.000 3.32 0.00 0.00 3.18
3318 3874 1.229272 TGGCCTACCACCGGTAACT 60.229 57.895 6.87 0.00 42.67 2.24
3360 3917 6.463995 ACTGCCTGTAACAAGATTGAAAAA 57.536 33.333 0.00 0.00 0.00 1.94
3363 3920 7.653311 ACTGCCTGTAACAAGATTGAAAAATTC 59.347 33.333 0.00 0.00 0.00 2.17
3398 3972 2.408050 CTCTGTGGTTCTTGGTTCTCG 58.592 52.381 0.00 0.00 0.00 4.04
3399 3973 2.035961 CTCTGTGGTTCTTGGTTCTCGA 59.964 50.000 0.00 0.00 0.00 4.04
3400 3974 2.432874 TCTGTGGTTCTTGGTTCTCGAA 59.567 45.455 0.00 0.00 0.00 3.71
3401 3975 2.802816 CTGTGGTTCTTGGTTCTCGAAG 59.197 50.000 0.00 0.00 0.00 3.79
3402 3976 2.432874 TGTGGTTCTTGGTTCTCGAAGA 59.567 45.455 0.00 0.00 36.80 2.87
3403 3977 2.801111 GTGGTTCTTGGTTCTCGAAGAC 59.199 50.000 0.00 0.00 37.94 3.01
3404 3978 2.698797 TGGTTCTTGGTTCTCGAAGACT 59.301 45.455 0.00 0.00 37.94 3.24
3405 3979 3.134081 TGGTTCTTGGTTCTCGAAGACTT 59.866 43.478 0.00 0.00 37.94 3.01
3406 3980 3.741856 GGTTCTTGGTTCTCGAAGACTTC 59.258 47.826 5.03 5.03 37.94 3.01
3407 3981 4.501743 GGTTCTTGGTTCTCGAAGACTTCT 60.502 45.833 13.22 0.00 37.94 2.85
3408 3982 4.244425 TCTTGGTTCTCGAAGACTTCTG 57.756 45.455 13.22 7.09 34.42 3.02
3409 3983 3.005897 TCTTGGTTCTCGAAGACTTCTGG 59.994 47.826 13.22 5.91 34.42 3.86
3410 3984 1.618837 TGGTTCTCGAAGACTTCTGGG 59.381 52.381 13.22 7.04 0.00 4.45
3411 3985 1.893801 GGTTCTCGAAGACTTCTGGGA 59.106 52.381 13.22 9.12 0.00 4.37
3412 3986 2.498078 GGTTCTCGAAGACTTCTGGGAT 59.502 50.000 13.22 0.00 0.00 3.85
3413 3987 3.055747 GGTTCTCGAAGACTTCTGGGATT 60.056 47.826 13.22 0.00 0.00 3.01
3414 3988 4.177783 GTTCTCGAAGACTTCTGGGATTC 58.822 47.826 13.22 5.63 0.00 2.52
3418 3992 3.055819 TCGAAGACTTCTGGGATTCTTGG 60.056 47.826 13.22 0.00 0.00 3.61
3428 4002 1.457346 GGATTCTTGGAGTGGCACAG 58.543 55.000 21.41 8.43 41.80 3.66
3446 4020 4.917415 GCACAGTGGCACTTATTAGTTTTG 59.083 41.667 19.43 6.01 30.26 2.44
3455 4029 8.682710 TGGCACTTATTAGTTTTGAATATGACC 58.317 33.333 0.00 0.00 30.26 4.02
3491 4068 3.554934 TGTTGCAGGAAAACTCTCATGT 58.445 40.909 0.00 0.00 29.86 3.21
3640 4217 3.631250 TCAATGGCCCTTTCACCTTATC 58.369 45.455 0.00 0.00 0.00 1.75
3652 4229 1.859080 CACCTTATCGCGTCTTTAGGC 59.141 52.381 5.77 0.00 0.00 3.93
3704 4281 6.992715 GCTTGTAGGTACTTGATAATGACCAT 59.007 38.462 0.00 0.00 41.75 3.55
3785 4362 2.961062 AGTTGCTTCTTCTGCCATTTGT 59.039 40.909 0.00 0.00 0.00 2.83
3790 4367 3.056322 GCTTCTTCTGCCATTTGTGGATT 60.056 43.478 0.00 0.00 0.00 3.01
3813 4390 5.587388 ATCCATTGTGCTTTTGTCCATAG 57.413 39.130 0.00 0.00 0.00 2.23
3822 4399 8.382030 TGTGCTTTTGTCCATAGTGATATATG 57.618 34.615 0.00 0.00 33.68 1.78
3824 4401 8.840321 GTGCTTTTGTCCATAGTGATATATGTT 58.160 33.333 0.00 0.00 32.27 2.71
3853 4924 6.730960 TTGTTAATACATCGAGGTGGTTTC 57.269 37.500 13.92 1.60 33.44 2.78
3860 4931 3.627577 ACATCGAGGTGGTTTCAATATGC 59.372 43.478 0.00 0.00 0.00 3.14
3879 4950 1.134729 GCCATGCATTGTTTCCCGAAT 60.135 47.619 0.00 0.00 0.00 3.34
3886 4957 7.424803 CATGCATTGTTTCCCGAATTTAGATA 58.575 34.615 0.00 0.00 0.00 1.98
3893 4964 8.036273 TGTTTCCCGAATTTAGATACAAAGTC 57.964 34.615 0.00 0.00 0.00 3.01
3908 4979 9.862371 AGATACAAAGTCAAGTTATGTAGAGTG 57.138 33.333 0.00 0.00 30.76 3.51
3913 5067 9.424319 CAAAGTCAAGTTATGTAGAGTGTACAT 57.576 33.333 16.36 16.36 40.77 2.29
3922 5076 9.378551 GTTATGTAGAGTGTACATCCATTTTCA 57.621 33.333 15.67 0.00 38.84 2.69
3931 5085 9.342308 AGTGTACATCCATTTTCATATTACCTG 57.658 33.333 0.00 0.00 0.00 4.00
3991 5174 5.694995 AGTTTTTCTTCCACTTCAGATCCA 58.305 37.500 0.00 0.00 0.00 3.41
3993 5176 6.208204 AGTTTTTCTTCCACTTCAGATCCATG 59.792 38.462 0.00 0.00 0.00 3.66
4017 5200 2.029470 TCCATTTTTGTTGCCCATCGTC 60.029 45.455 0.00 0.00 0.00 4.20
4127 5310 2.410939 GTCAAAAGGACACGTAGGGAC 58.589 52.381 0.00 0.00 46.19 4.46
4130 5313 0.829182 AAAGGACACGTAGGGACCGT 60.829 55.000 0.00 0.00 39.52 4.83
4260 5443 1.522092 CTGGCATCGTTAGCAGGGA 59.478 57.895 0.00 0.00 0.00 4.20
4355 5543 1.729149 GCTTACGCATCTGTTTGTGCC 60.729 52.381 0.00 0.00 38.08 5.01
4361 5549 1.825090 CATCTGTTTGTGCCTGGCTA 58.175 50.000 21.03 6.16 0.00 3.93
4362 5550 2.372264 CATCTGTTTGTGCCTGGCTAT 58.628 47.619 21.03 0.00 0.00 2.97
4419 5607 5.204409 TCTGTATGTACAACAAACGAGGT 57.796 39.130 0.00 0.00 35.50 3.85
4449 5637 3.996124 ACGCACGAGCTCAAGCCT 61.996 61.111 15.40 3.89 43.38 4.58
4467 5655 2.852748 CCTGAGTACAAGAAGTCGTCG 58.147 52.381 0.00 0.00 0.00 5.12
4498 5686 2.029844 GGTGCTGCTCCGTGAAGAC 61.030 63.158 4.83 0.00 0.00 3.01
4551 5746 3.412386 GAGTACCTGTTGGCTTTGATGT 58.588 45.455 0.00 0.00 36.63 3.06
4606 5801 1.611261 ATGCCTGGGCTGCATTTGT 60.611 52.632 13.05 0.00 46.91 2.83
4628 5827 7.707774 TGTTTGCTTTTTATTAAGAAGGCAC 57.292 32.000 8.34 1.60 0.00 5.01
4691 5891 2.575532 ACAACACATGTCACAGAAGGG 58.424 47.619 0.00 0.00 37.96 3.95
4694 5894 2.851195 ACACATGTCACAGAAGGGAAC 58.149 47.619 0.00 0.00 0.00 3.62
4696 5896 1.691976 ACATGTCACAGAAGGGAACGA 59.308 47.619 0.00 0.00 0.00 3.85
4717 5917 6.873997 ACGAATCTACTGATAAACCACATGA 58.126 36.000 0.00 0.00 31.70 3.07
4756 5958 3.956199 CCAGGGTAGATGCAAATCATGTT 59.044 43.478 0.00 0.00 35.05 2.71
4807 6009 5.070047 TCCTTTTGAGAACTTCCGTACTTCT 59.930 40.000 0.00 0.00 0.00 2.85
4817 6019 8.637099 AGAACTTCCGTACTTCTATATAAACCC 58.363 37.037 0.00 0.00 0.00 4.11
4818 6020 7.902920 ACTTCCGTACTTCTATATAAACCCA 57.097 36.000 0.00 0.00 0.00 4.51
4819 6021 7.949434 ACTTCCGTACTTCTATATAAACCCAG 58.051 38.462 0.00 0.00 0.00 4.45
4820 6022 7.781693 ACTTCCGTACTTCTATATAAACCCAGA 59.218 37.037 0.00 0.00 0.00 3.86
4821 6023 8.716674 TTCCGTACTTCTATATAAACCCAGAT 57.283 34.615 0.00 0.00 0.00 2.90
4849 6051 8.472683 TTGGGCTAAAAACAAATATGAAATCG 57.527 30.769 0.00 0.00 0.00 3.34
4858 6060 6.551385 ACAAATATGAAATCGAGCCTGATC 57.449 37.500 0.00 0.00 0.00 2.92
4859 6061 6.294473 ACAAATATGAAATCGAGCCTGATCT 58.706 36.000 0.00 0.00 0.00 2.75
4860 6062 6.426328 ACAAATATGAAATCGAGCCTGATCTC 59.574 38.462 0.00 0.00 0.00 2.75
4861 6063 5.735285 ATATGAAATCGAGCCTGATCTCA 57.265 39.130 0.00 0.00 30.42 3.27
4862 6064 3.893326 TGAAATCGAGCCTGATCTCAA 57.107 42.857 0.00 0.00 33.41 3.02
4863 6065 4.206477 TGAAATCGAGCCTGATCTCAAA 57.794 40.909 0.00 0.00 33.41 2.69
4864 6066 3.935203 TGAAATCGAGCCTGATCTCAAAC 59.065 43.478 0.00 0.00 33.41 2.93
4865 6067 2.611225 ATCGAGCCTGATCTCAAACC 57.389 50.000 0.00 0.00 33.41 3.27
4866 6068 1.561643 TCGAGCCTGATCTCAAACCT 58.438 50.000 0.00 0.00 33.41 3.50
4867 6069 1.205655 TCGAGCCTGATCTCAAACCTG 59.794 52.381 0.00 0.00 33.41 4.00
4868 6070 1.205655 CGAGCCTGATCTCAAACCTGA 59.794 52.381 0.00 0.00 33.41 3.86
4869 6071 2.354103 CGAGCCTGATCTCAAACCTGAA 60.354 50.000 0.00 0.00 33.41 3.02
4870 6072 3.006247 GAGCCTGATCTCAAACCTGAAC 58.994 50.000 0.00 0.00 33.41 3.18
4871 6073 2.373169 AGCCTGATCTCAAACCTGAACA 59.627 45.455 0.00 0.00 0.00 3.18
4872 6074 3.149196 GCCTGATCTCAAACCTGAACAA 58.851 45.455 0.00 0.00 0.00 2.83
4873 6075 3.760684 GCCTGATCTCAAACCTGAACAAT 59.239 43.478 0.00 0.00 0.00 2.71
4874 6076 4.219288 GCCTGATCTCAAACCTGAACAATT 59.781 41.667 0.00 0.00 0.00 2.32
4875 6077 5.279156 GCCTGATCTCAAACCTGAACAATTT 60.279 40.000 0.00 0.00 0.00 1.82
4876 6078 6.739565 GCCTGATCTCAAACCTGAACAATTTT 60.740 38.462 0.00 0.00 0.00 1.82
4877 6079 6.643770 CCTGATCTCAAACCTGAACAATTTTG 59.356 38.462 0.00 0.00 0.00 2.44
4878 6080 6.514947 TGATCTCAAACCTGAACAATTTTGG 58.485 36.000 0.00 0.00 31.20 3.28
4879 6081 5.275067 TCTCAAACCTGAACAATTTTGGG 57.725 39.130 0.00 0.00 31.76 4.12
4880 6082 3.802866 TCAAACCTGAACAATTTTGGGC 58.197 40.909 0.00 0.00 31.20 5.36
4881 6083 3.454082 TCAAACCTGAACAATTTTGGGCT 59.546 39.130 0.00 0.00 31.20 5.19
4882 6084 4.651503 TCAAACCTGAACAATTTTGGGCTA 59.348 37.500 0.00 0.00 31.20 3.93
4883 6085 5.129485 TCAAACCTGAACAATTTTGGGCTAA 59.871 36.000 0.00 0.00 31.20 3.09
4884 6086 5.622346 AACCTGAACAATTTTGGGCTAAA 57.378 34.783 0.00 0.00 0.00 1.85
4885 6087 5.622346 ACCTGAACAATTTTGGGCTAAAA 57.378 34.783 11.28 11.28 42.10 1.52
4886 6088 5.610398 ACCTGAACAATTTTGGGCTAAAAG 58.390 37.500 14.16 4.60 41.26 2.27
4887 6089 4.452114 CCTGAACAATTTTGGGCTAAAAGC 59.548 41.667 14.16 2.78 41.26 3.51
4888 6090 5.028549 TGAACAATTTTGGGCTAAAAGCA 57.971 34.783 14.16 5.01 44.75 3.91
4889 6091 5.431765 TGAACAATTTTGGGCTAAAAGCAA 58.568 33.333 14.16 0.00 44.75 3.91
4890 6092 5.882557 TGAACAATTTTGGGCTAAAAGCAAA 59.117 32.000 14.16 0.00 44.75 3.68
4891 6093 6.545298 TGAACAATTTTGGGCTAAAAGCAAAT 59.455 30.769 14.16 0.34 44.75 2.32
4892 6094 7.716998 TGAACAATTTTGGGCTAAAAGCAAATA 59.283 29.630 14.16 0.00 44.75 1.40
4893 6095 8.634335 AACAATTTTGGGCTAAAAGCAAATAT 57.366 26.923 14.16 0.00 44.75 1.28
4894 6096 8.042944 ACAATTTTGGGCTAAAAGCAAATATG 57.957 30.769 14.16 7.01 44.75 1.78
4895 6097 7.882271 ACAATTTTGGGCTAAAAGCAAATATGA 59.118 29.630 14.16 0.00 44.75 2.15
4896 6098 8.728833 CAATTTTGGGCTAAAAGCAAATATGAA 58.271 29.630 14.16 0.00 44.75 2.57
4897 6099 8.860780 ATTTTGGGCTAAAAGCAAATATGAAA 57.139 26.923 14.16 0.00 44.75 2.69
4898 6100 8.860780 TTTTGGGCTAAAAGCAAATATGAAAT 57.139 26.923 4.51 0.00 44.75 2.17
4899 6101 8.491331 TTTGGGCTAAAAGCAAATATGAAATC 57.509 30.769 0.78 0.00 44.75 2.17
4900 6102 6.272318 TGGGCTAAAAGCAAATATGAAATCG 58.728 36.000 0.78 0.00 44.75 3.34
4901 6103 6.096141 TGGGCTAAAAGCAAATATGAAATCGA 59.904 34.615 0.78 0.00 44.75 3.59
4902 6104 6.638468 GGGCTAAAAGCAAATATGAAATCGAG 59.362 38.462 0.78 0.00 44.75 4.04
4903 6105 6.142958 GGCTAAAAGCAAATATGAAATCGAGC 59.857 38.462 0.78 0.00 44.75 5.03
4904 6106 6.142958 GCTAAAAGCAAATATGAAATCGAGCC 59.857 38.462 0.00 0.00 41.89 4.70
4905 6107 5.841957 AAAGCAAATATGAAATCGAGCCT 57.158 34.783 0.00 0.00 0.00 4.58
4906 6108 4.825546 AGCAAATATGAAATCGAGCCTG 57.174 40.909 0.00 0.00 0.00 4.85
4907 6109 4.454678 AGCAAATATGAAATCGAGCCTGA 58.545 39.130 0.00 0.00 0.00 3.86
4908 6110 5.068636 AGCAAATATGAAATCGAGCCTGAT 58.931 37.500 0.00 0.00 0.00 2.90
4909 6111 5.180868 AGCAAATATGAAATCGAGCCTGATC 59.819 40.000 0.00 0.00 0.00 2.92
4910 6112 5.180868 GCAAATATGAAATCGAGCCTGATCT 59.819 40.000 0.00 0.00 0.00 2.75
4911 6113 6.293845 GCAAATATGAAATCGAGCCTGATCTT 60.294 38.462 0.00 0.00 0.00 2.40
4912 6114 7.095060 GCAAATATGAAATCGAGCCTGATCTTA 60.095 37.037 0.00 0.00 0.00 2.10
4913 6115 8.777413 CAAATATGAAATCGAGCCTGATCTTAA 58.223 33.333 0.00 0.00 0.00 1.85
4914 6116 8.908786 AATATGAAATCGAGCCTGATCTTAAA 57.091 30.769 0.00 0.00 0.00 1.52
4915 6117 6.610741 ATGAAATCGAGCCTGATCTTAAAC 57.389 37.500 0.00 0.00 0.00 2.01
4916 6118 4.876107 TGAAATCGAGCCTGATCTTAAACC 59.124 41.667 0.00 0.00 0.00 3.27
4917 6119 4.762289 AATCGAGCCTGATCTTAAACCT 57.238 40.909 0.00 0.00 0.00 3.50
4918 6120 3.526931 TCGAGCCTGATCTTAAACCTG 57.473 47.619 0.00 0.00 0.00 4.00
4919 6121 3.096852 TCGAGCCTGATCTTAAACCTGA 58.903 45.455 0.00 0.00 0.00 3.86
4920 6122 3.131223 TCGAGCCTGATCTTAAACCTGAG 59.869 47.826 0.00 0.00 0.00 3.35
4921 6123 3.131223 CGAGCCTGATCTTAAACCTGAGA 59.869 47.826 0.00 0.00 0.00 3.27
4922 6124 4.692228 GAGCCTGATCTTAAACCTGAGAG 58.308 47.826 0.00 0.00 0.00 3.20
4923 6125 3.118445 AGCCTGATCTTAAACCTGAGAGC 60.118 47.826 0.00 0.00 0.00 4.09
4924 6126 3.452474 CCTGATCTTAAACCTGAGAGCG 58.548 50.000 0.00 0.00 31.20 5.03
4925 6127 3.131223 CCTGATCTTAAACCTGAGAGCGA 59.869 47.826 0.00 0.00 31.20 4.93
4926 6128 4.358851 CTGATCTTAAACCTGAGAGCGAG 58.641 47.826 0.00 0.00 31.20 5.03
4927 6129 4.017126 TGATCTTAAACCTGAGAGCGAGA 58.983 43.478 0.00 0.00 31.20 4.04
4928 6130 4.097135 TGATCTTAAACCTGAGAGCGAGAG 59.903 45.833 0.00 0.00 31.20 3.20
4929 6131 3.687125 TCTTAAACCTGAGAGCGAGAGA 58.313 45.455 0.00 0.00 0.00 3.10
4930 6132 3.692101 TCTTAAACCTGAGAGCGAGAGAG 59.308 47.826 0.00 0.00 0.00 3.20
4931 6133 2.208132 AAACCTGAGAGCGAGAGAGA 57.792 50.000 0.00 0.00 0.00 3.10
4932 6134 2.435372 AACCTGAGAGCGAGAGAGAT 57.565 50.000 0.00 0.00 0.00 2.75
4933 6135 2.435372 ACCTGAGAGCGAGAGAGATT 57.565 50.000 0.00 0.00 0.00 2.40
4934 6136 2.023673 ACCTGAGAGCGAGAGAGATTG 58.976 52.381 0.00 0.00 0.00 2.67
4935 6137 2.023673 CCTGAGAGCGAGAGAGATTGT 58.976 52.381 0.00 0.00 0.00 2.71
4936 6138 2.223548 CCTGAGAGCGAGAGAGATTGTG 60.224 54.545 0.00 0.00 0.00 3.33
4937 6139 2.682352 CTGAGAGCGAGAGAGATTGTGA 59.318 50.000 0.00 0.00 0.00 3.58
4938 6140 2.682352 TGAGAGCGAGAGAGATTGTGAG 59.318 50.000 0.00 0.00 0.00 3.51
4939 6141 2.942376 GAGAGCGAGAGAGATTGTGAGA 59.058 50.000 0.00 0.00 0.00 3.27
4940 6142 2.682856 AGAGCGAGAGAGATTGTGAGAC 59.317 50.000 0.00 0.00 0.00 3.36
4941 6143 1.400142 AGCGAGAGAGATTGTGAGACG 59.600 52.381 0.00 0.00 0.00 4.18
4942 6144 1.821336 CGAGAGAGATTGTGAGACGC 58.179 55.000 0.00 0.00 0.00 5.19
4943 6145 1.400142 CGAGAGAGATTGTGAGACGCT 59.600 52.381 0.00 0.00 0.00 5.07
4944 6146 2.609916 CGAGAGAGATTGTGAGACGCTA 59.390 50.000 0.00 0.00 0.00 4.26
4945 6147 3.545228 CGAGAGAGATTGTGAGACGCTAC 60.545 52.174 0.00 0.00 0.00 3.58
4946 6148 2.353269 AGAGAGATTGTGAGACGCTACG 59.647 50.000 0.00 0.00 0.00 3.51
4947 6149 1.192793 GAGATTGTGAGACGCTACGC 58.807 55.000 0.00 0.00 0.00 4.42
4948 6150 0.526211 AGATTGTGAGACGCTACGCA 59.474 50.000 0.00 0.00 0.00 5.24
4949 6151 0.640768 GATTGTGAGACGCTACGCAC 59.359 55.000 6.85 6.85 40.09 5.34
4950 6152 0.243907 ATTGTGAGACGCTACGCACT 59.756 50.000 12.77 0.00 40.27 4.40
4951 6153 0.876399 TTGTGAGACGCTACGCACTA 59.124 50.000 12.77 5.18 40.27 2.74
4952 6154 0.876399 TGTGAGACGCTACGCACTAA 59.124 50.000 12.77 0.00 40.27 2.24
4953 6155 1.471287 TGTGAGACGCTACGCACTAAT 59.529 47.619 12.77 0.00 40.27 1.73
4954 6156 2.094906 TGTGAGACGCTACGCACTAATT 60.095 45.455 12.77 0.00 40.27 1.40
4955 6157 2.921754 GTGAGACGCTACGCACTAATTT 59.078 45.455 6.62 0.00 37.54 1.82
4956 6158 3.367025 GTGAGACGCTACGCACTAATTTT 59.633 43.478 6.62 0.00 37.54 1.82
4957 6159 3.991773 TGAGACGCTACGCACTAATTTTT 59.008 39.130 0.00 0.00 0.00 1.94
5010 6215 8.139989 GCTTTATTCATATGAAGGCATTCTTGT 58.860 33.333 21.97 1.38 37.48 3.16
5065 6271 0.108233 GAGTCTCCTCAAGCCAGCTG 60.108 60.000 6.78 6.78 37.67 4.24
5117 6323 1.819208 CAAAGATGCGCCGGGATGA 60.819 57.895 4.18 0.00 0.00 2.92
5254 6460 1.667724 GTCACCATCTCCAAGCAATCG 59.332 52.381 0.00 0.00 0.00 3.34
5315 6521 1.066858 ACCGAACTCCGTCTCGTAGTA 60.067 52.381 0.00 0.00 36.31 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
232 235 8.884124 AGAAAACATGAGGATCCTTAAATTGA 57.116 30.769 17.42 0.00 0.00 2.57
469 472 1.448497 GGGACACCCGAAGACAACA 59.552 57.895 0.00 0.00 32.13 3.33
493 496 2.671619 CGCCAACCCGTGAACCAT 60.672 61.111 0.00 0.00 0.00 3.55
797 806 9.332301 GCAGAGACATTATCGATTAACTAGTAC 57.668 37.037 1.71 0.00 0.00 2.73
809 818 4.551388 GGGTAAGAGCAGAGACATTATCG 58.449 47.826 0.00 0.00 0.00 2.92
810 819 4.038162 ACGGGTAAGAGCAGAGACATTATC 59.962 45.833 0.00 0.00 0.00 1.75
956 976 3.391382 GGTCTCGTGGTCTGGGGG 61.391 72.222 0.00 0.00 0.00 5.40
957 977 2.603473 TGGTCTCGTGGTCTGGGG 60.603 66.667 0.00 0.00 0.00 4.96
958 978 2.657237 GTGGTCTCGTGGTCTGGG 59.343 66.667 0.00 0.00 0.00 4.45
959 979 2.657237 GGTGGTCTCGTGGTCTGG 59.343 66.667 0.00 0.00 0.00 3.86
960 980 2.657237 GGGTGGTCTCGTGGTCTG 59.343 66.667 0.00 0.00 0.00 3.51
961 981 2.989824 CGGGTGGTCTCGTGGTCT 60.990 66.667 0.00 0.00 0.00 3.85
962 982 4.736896 GCGGGTGGTCTCGTGGTC 62.737 72.222 0.00 0.00 0.00 4.02
1389 1696 4.338012 TCATGAGCACAATTGTCTCCAAT 58.662 39.130 23.52 14.68 43.14 3.16
1420 1728 4.051922 CCCGAATCATATATAGAAGGCGC 58.948 47.826 0.00 0.00 0.00 6.53
1435 1744 4.671766 CGAACTCAAACAAATCCCCGAATC 60.672 45.833 0.00 0.00 0.00 2.52
1439 1748 1.401018 GCGAACTCAAACAAATCCCCG 60.401 52.381 0.00 0.00 0.00 5.73
1456 1765 0.747255 CTTCCTAGCCTAGCTTGCGA 59.253 55.000 0.00 0.00 40.44 5.10
1475 1784 3.945285 TCAACCAGTCTTCACCAAACTTC 59.055 43.478 0.00 0.00 0.00 3.01
1521 1830 2.103094 TCACCCATCGACTTCATCATCC 59.897 50.000 0.00 0.00 0.00 3.51
1533 1842 4.060900 CAGAGATTACCATTCACCCATCG 58.939 47.826 0.00 0.00 0.00 3.84
1541 1850 6.352016 TCCTAGCATCAGAGATTACCATTC 57.648 41.667 0.00 0.00 0.00 2.67
1802 2129 5.391312 ACTGCCATTCCAAATAACAAGTC 57.609 39.130 0.00 0.00 0.00 3.01
1940 2267 3.769300 AGCAGGGAATTTGTTTCATACCC 59.231 43.478 0.00 0.00 35.94 3.69
1969 2296 6.816134 AACATTGACACATGCACTACAATA 57.184 33.333 0.00 0.00 0.00 1.90
2151 2478 9.750125 GACATGACACATCACAGAATTATAGTA 57.250 33.333 0.00 0.00 37.79 1.82
2202 2529 6.071840 ACGTGTCTAGCTCTCTTGTAGAAAAT 60.072 38.462 0.00 0.00 32.46 1.82
2210 2537 1.068264 TGCACGTGTCTAGCTCTCTTG 60.068 52.381 18.38 0.00 0.00 3.02
2301 2634 0.386113 TACGGTGCAAAAGGTTTGGC 59.614 50.000 0.00 0.00 37.62 4.52
2371 2704 7.715657 TCCATACATGCCAAACTAAATCATTC 58.284 34.615 0.00 0.00 0.00 2.67
2372 2705 7.658525 TCCATACATGCCAAACTAAATCATT 57.341 32.000 0.00 0.00 0.00 2.57
2373 2706 7.844493 ATCCATACATGCCAAACTAAATCAT 57.156 32.000 0.00 0.00 0.00 2.45
2374 2707 7.658525 AATCCATACATGCCAAACTAAATCA 57.341 32.000 0.00 0.00 0.00 2.57
2375 2708 8.947055 AAAATCCATACATGCCAAACTAAATC 57.053 30.769 0.00 0.00 0.00 2.17
2376 2709 8.761689 AGAAAATCCATACATGCCAAACTAAAT 58.238 29.630 0.00 0.00 0.00 1.40
2381 2714 5.964758 TCAGAAAATCCATACATGCCAAAC 58.035 37.500 0.00 0.00 0.00 2.93
2383 2716 6.795144 AATCAGAAAATCCATACATGCCAA 57.205 33.333 0.00 0.00 0.00 4.52
2384 2717 6.795144 AAATCAGAAAATCCATACATGCCA 57.205 33.333 0.00 0.00 0.00 4.92
2385 2718 7.267128 TCAAAATCAGAAAATCCATACATGCC 58.733 34.615 0.00 0.00 0.00 4.40
2386 2719 8.882415 ATCAAAATCAGAAAATCCATACATGC 57.118 30.769 0.00 0.00 0.00 4.06
2388 2721 9.321562 GCAATCAAAATCAGAAAATCCATACAT 57.678 29.630 0.00 0.00 0.00 2.29
2389 2722 8.312564 TGCAATCAAAATCAGAAAATCCATACA 58.687 29.630 0.00 0.00 0.00 2.29
2390 2723 8.598075 GTGCAATCAAAATCAGAAAATCCATAC 58.402 33.333 0.00 0.00 0.00 2.39
2391 2724 8.533657 AGTGCAATCAAAATCAGAAAATCCATA 58.466 29.630 0.00 0.00 0.00 2.74
2392 2725 7.391620 AGTGCAATCAAAATCAGAAAATCCAT 58.608 30.769 0.00 0.00 0.00 3.41
2393 2726 6.761312 AGTGCAATCAAAATCAGAAAATCCA 58.239 32.000 0.00 0.00 0.00 3.41
2394 2727 8.031277 ACTAGTGCAATCAAAATCAGAAAATCC 58.969 33.333 0.00 0.00 0.00 3.01
2395 2728 8.976986 ACTAGTGCAATCAAAATCAGAAAATC 57.023 30.769 0.00 0.00 0.00 2.17
2396 2729 9.199982 CAACTAGTGCAATCAAAATCAGAAAAT 57.800 29.630 0.00 0.00 0.00 1.82
2397 2730 7.652909 CCAACTAGTGCAATCAAAATCAGAAAA 59.347 33.333 0.00 0.00 0.00 2.29
2398 2731 7.147312 CCAACTAGTGCAATCAAAATCAGAAA 58.853 34.615 0.00 0.00 0.00 2.52
2399 2732 6.294675 CCCAACTAGTGCAATCAAAATCAGAA 60.295 38.462 0.00 0.00 0.00 3.02
2400 2733 5.183713 CCCAACTAGTGCAATCAAAATCAGA 59.816 40.000 0.00 0.00 0.00 3.27
2401 2734 5.404946 CCCAACTAGTGCAATCAAAATCAG 58.595 41.667 0.00 0.00 0.00 2.90
2402 2735 4.321899 GCCCAACTAGTGCAATCAAAATCA 60.322 41.667 0.00 0.00 0.00 2.57
2403 2736 4.082026 AGCCCAACTAGTGCAATCAAAATC 60.082 41.667 0.00 0.00 0.00 2.17
2404 2737 3.834231 AGCCCAACTAGTGCAATCAAAAT 59.166 39.130 0.00 0.00 0.00 1.82
2405 2738 3.230134 AGCCCAACTAGTGCAATCAAAA 58.770 40.909 0.00 0.00 0.00 2.44
2414 2747 4.081420 ACTCAACAGATAGCCCAACTAGTG 60.081 45.833 0.00 0.00 33.29 2.74
2416 2749 4.744795 ACTCAACAGATAGCCCAACTAG 57.255 45.455 0.00 0.00 33.29 2.57
2417 2750 5.499004 AAACTCAACAGATAGCCCAACTA 57.501 39.130 0.00 0.00 34.64 2.24
2419 2752 6.569179 TTAAAACTCAACAGATAGCCCAAC 57.431 37.500 0.00 0.00 0.00 3.77
2456 2789 8.482852 AAGGGTATCAAAATTATGAAGATGGG 57.517 34.615 0.00 0.00 32.06 4.00
2499 2834 0.042708 GCATGTTCTATGCTCGCACG 60.043 55.000 4.73 0.00 41.52 5.34
2510 2845 9.537192 CAAATTCACAAATATATGGCATGTTCT 57.463 29.630 10.98 0.00 0.00 3.01
2511 2846 9.316730 ACAAATTCACAAATATATGGCATGTTC 57.683 29.630 10.98 0.00 0.00 3.18
2512 2847 9.316730 GACAAATTCACAAATATATGGCATGTT 57.683 29.630 10.98 0.00 0.00 2.71
2513 2848 8.698210 AGACAAATTCACAAATATATGGCATGT 58.302 29.630 10.98 6.03 0.00 3.21
2522 2857 7.981225 GGCCAACATAGACAAATTCACAAATAT 59.019 33.333 0.00 0.00 0.00 1.28
2523 2858 7.178274 AGGCCAACATAGACAAATTCACAAATA 59.822 33.333 5.01 0.00 0.00 1.40
2524 2859 6.014327 AGGCCAACATAGACAAATTCACAAAT 60.014 34.615 5.01 0.00 0.00 2.32
2525 2860 5.304101 AGGCCAACATAGACAAATTCACAAA 59.696 36.000 5.01 0.00 0.00 2.83
2526 2861 4.832266 AGGCCAACATAGACAAATTCACAA 59.168 37.500 5.01 0.00 0.00 3.33
2527 2862 4.406456 AGGCCAACATAGACAAATTCACA 58.594 39.130 5.01 0.00 0.00 3.58
2528 2863 6.699575 ATAGGCCAACATAGACAAATTCAC 57.300 37.500 5.01 0.00 0.00 3.18
2529 2864 7.546358 CAAATAGGCCAACATAGACAAATTCA 58.454 34.615 5.01 0.00 0.00 2.57
2530 2865 6.476706 GCAAATAGGCCAACATAGACAAATTC 59.523 38.462 5.01 0.00 0.00 2.17
2531 2866 6.155049 AGCAAATAGGCCAACATAGACAAATT 59.845 34.615 5.01 0.00 0.00 1.82
2532 2867 5.658190 AGCAAATAGGCCAACATAGACAAAT 59.342 36.000 5.01 0.00 0.00 2.32
2533 2868 5.016173 AGCAAATAGGCCAACATAGACAAA 58.984 37.500 5.01 0.00 0.00 2.83
2534 2869 4.599041 AGCAAATAGGCCAACATAGACAA 58.401 39.130 5.01 0.00 0.00 3.18
2535 2870 4.235079 AGCAAATAGGCCAACATAGACA 57.765 40.909 5.01 0.00 0.00 3.41
2536 2871 6.055588 TCTAAGCAAATAGGCCAACATAGAC 58.944 40.000 5.01 0.00 0.00 2.59
2537 2872 6.247229 TCTAAGCAAATAGGCCAACATAGA 57.753 37.500 5.01 0.00 0.00 1.98
2538 2873 6.942532 TTCTAAGCAAATAGGCCAACATAG 57.057 37.500 5.01 0.00 0.00 2.23
2539 2874 7.896383 AATTCTAAGCAAATAGGCCAACATA 57.104 32.000 5.01 0.00 0.00 2.29
2540 2875 6.796785 AATTCTAAGCAAATAGGCCAACAT 57.203 33.333 5.01 0.00 0.00 2.71
2541 2876 6.603940 AAATTCTAAGCAAATAGGCCAACA 57.396 33.333 5.01 0.00 0.00 3.33
2542 2877 8.996024 TTAAAATTCTAAGCAAATAGGCCAAC 57.004 30.769 5.01 0.00 0.00 3.77
2543 2878 9.598517 CATTAAAATTCTAAGCAAATAGGCCAA 57.401 29.630 5.01 0.00 0.00 4.52
2544 2879 8.976353 TCATTAAAATTCTAAGCAAATAGGCCA 58.024 29.630 5.01 0.00 0.00 5.36
2545 2880 9.987272 ATCATTAAAATTCTAAGCAAATAGGCC 57.013 29.630 0.00 0.00 0.00 5.19
2558 2893 9.699410 TGGGACAATCACTATCATTAAAATTCT 57.301 29.630 0.00 0.00 31.92 2.40
2574 2909 9.204337 ATCAAAATTATGAAGATGGGACAATCA 57.796 29.630 0.00 0.00 35.41 2.57
2577 2912 8.912988 GGTATCAAAATTATGAAGATGGGACAA 58.087 33.333 0.00 0.00 35.41 3.18
2578 2913 7.505585 GGGTATCAAAATTATGAAGATGGGACA 59.494 37.037 0.00 0.00 36.06 4.02
2579 2914 7.725844 AGGGTATCAAAATTATGAAGATGGGAC 59.274 37.037 0.00 0.00 32.06 4.46
2580 2915 7.725397 CAGGGTATCAAAATTATGAAGATGGGA 59.275 37.037 0.00 0.00 32.06 4.37
2581 2916 7.506938 ACAGGGTATCAAAATTATGAAGATGGG 59.493 37.037 0.00 0.00 32.06 4.00
2582 2917 8.469309 ACAGGGTATCAAAATTATGAAGATGG 57.531 34.615 0.00 0.00 32.06 3.51
2583 2918 8.571336 GGACAGGGTATCAAAATTATGAAGATG 58.429 37.037 0.00 0.00 32.06 2.90
2584 2919 8.506083 AGGACAGGGTATCAAAATTATGAAGAT 58.494 33.333 0.00 0.00 32.06 2.40
2585 2920 7.872138 AGGACAGGGTATCAAAATTATGAAGA 58.128 34.615 0.00 0.00 32.06 2.87
2586 2921 8.525290 AAGGACAGGGTATCAAAATTATGAAG 57.475 34.615 0.00 0.00 32.06 3.02
2587 2922 8.336235 AGAAGGACAGGGTATCAAAATTATGAA 58.664 33.333 0.00 0.00 32.06 2.57
2588 2923 7.872138 AGAAGGACAGGGTATCAAAATTATGA 58.128 34.615 0.00 0.00 0.00 2.15
2589 2924 9.627123 TTAGAAGGACAGGGTATCAAAATTATG 57.373 33.333 0.00 0.00 0.00 1.90
2592 2927 8.950007 TTTTAGAAGGACAGGGTATCAAAATT 57.050 30.769 0.00 0.00 0.00 1.82
2593 2928 8.971073 CATTTTAGAAGGACAGGGTATCAAAAT 58.029 33.333 0.00 0.00 0.00 1.82
2594 2929 7.947890 ACATTTTAGAAGGACAGGGTATCAAAA 59.052 33.333 0.00 0.00 0.00 2.44
2595 2930 7.466804 ACATTTTAGAAGGACAGGGTATCAAA 58.533 34.615 0.00 0.00 0.00 2.69
2596 2931 7.027874 ACATTTTAGAAGGACAGGGTATCAA 57.972 36.000 0.00 0.00 0.00 2.57
2597 2932 6.629515 CGACATTTTAGAAGGACAGGGTATCA 60.630 42.308 0.00 0.00 0.00 2.15
2598 2933 5.753921 CGACATTTTAGAAGGACAGGGTATC 59.246 44.000 0.00 0.00 0.00 2.24
2599 2934 5.671493 CGACATTTTAGAAGGACAGGGTAT 58.329 41.667 0.00 0.00 0.00 2.73
2600 2935 4.622220 GCGACATTTTAGAAGGACAGGGTA 60.622 45.833 0.00 0.00 0.00 3.69
2601 2936 3.868754 GCGACATTTTAGAAGGACAGGGT 60.869 47.826 0.00 0.00 0.00 4.34
2602 2937 2.678336 GCGACATTTTAGAAGGACAGGG 59.322 50.000 0.00 0.00 0.00 4.45
2603 2938 2.678336 GGCGACATTTTAGAAGGACAGG 59.322 50.000 0.00 0.00 0.00 4.00
2604 2939 2.348666 CGGCGACATTTTAGAAGGACAG 59.651 50.000 0.00 0.00 0.00 3.51
2605 2940 2.289195 ACGGCGACATTTTAGAAGGACA 60.289 45.455 16.62 0.00 0.00 4.02
2606 2941 2.093783 CACGGCGACATTTTAGAAGGAC 59.906 50.000 16.62 0.00 0.00 3.85
2607 2942 2.343101 CACGGCGACATTTTAGAAGGA 58.657 47.619 16.62 0.00 0.00 3.36
2608 2943 1.202031 GCACGGCGACATTTTAGAAGG 60.202 52.381 16.62 0.00 0.00 3.46
2609 2944 2.159467 GCACGGCGACATTTTAGAAG 57.841 50.000 16.62 0.00 0.00 2.85
2622 2957 1.154205 ATGTTCTATGCTCGCACGGC 61.154 55.000 0.00 0.00 0.00 5.68
2623 2958 1.258982 GAATGTTCTATGCTCGCACGG 59.741 52.381 0.00 0.00 0.00 4.94
2624 2959 1.258982 GGAATGTTCTATGCTCGCACG 59.741 52.381 0.00 0.00 0.00 5.34
2625 2960 2.030946 GTGGAATGTTCTATGCTCGCAC 59.969 50.000 0.00 0.00 0.00 5.34
2626 2961 2.279741 GTGGAATGTTCTATGCTCGCA 58.720 47.619 0.00 0.00 0.00 5.10
2627 2962 1.599542 GGTGGAATGTTCTATGCTCGC 59.400 52.381 0.00 0.00 0.00 5.03
2628 2963 3.185246 AGGTGGAATGTTCTATGCTCG 57.815 47.619 0.00 0.00 0.00 5.03
2629 2964 5.904362 AAAAGGTGGAATGTTCTATGCTC 57.096 39.130 0.00 0.00 0.00 4.26
2630 2965 6.012745 AGAAAAAGGTGGAATGTTCTATGCT 58.987 36.000 0.00 0.00 0.00 3.79
2631 2966 6.272822 AGAAAAAGGTGGAATGTTCTATGC 57.727 37.500 0.00 0.00 0.00 3.14
2632 2967 7.885297 TGAAGAAAAAGGTGGAATGTTCTATG 58.115 34.615 0.00 0.00 0.00 2.23
2633 2968 8.655935 ATGAAGAAAAAGGTGGAATGTTCTAT 57.344 30.769 0.00 0.00 0.00 1.98
2667 3002 7.100458 ACAATAGGCCAACATAGACAAATTC 57.900 36.000 5.01 0.00 0.00 2.17
2668 3003 8.766994 ATACAATAGGCCAACATAGACAAATT 57.233 30.769 5.01 0.00 0.00 1.82
2669 3004 8.220559 AGATACAATAGGCCAACATAGACAAAT 58.779 33.333 5.01 0.00 0.00 2.32
2670 3005 7.498900 CAGATACAATAGGCCAACATAGACAAA 59.501 37.037 5.01 0.00 0.00 2.83
2671 3006 6.992123 CAGATACAATAGGCCAACATAGACAA 59.008 38.462 5.01 0.00 0.00 3.18
2672 3007 6.524734 CAGATACAATAGGCCAACATAGACA 58.475 40.000 5.01 0.00 0.00 3.41
2673 3008 5.409826 GCAGATACAATAGGCCAACATAGAC 59.590 44.000 5.01 0.00 0.00 2.59
2674 3009 5.513094 GGCAGATACAATAGGCCAACATAGA 60.513 44.000 5.01 0.00 44.01 1.98
2692 3027 9.750783 AATATTGCTTAGAATATTCAGGCAGAT 57.249 29.630 17.56 17.38 34.71 2.90
2729 3064 7.839680 ATTCTAAATCCTGAAACTTGTGGTT 57.160 32.000 0.00 0.00 40.28 3.67
2730 3065 7.839680 AATTCTAAATCCTGAAACTTGTGGT 57.160 32.000 0.00 0.00 0.00 4.16
2731 3066 9.626045 GTAAATTCTAAATCCTGAAACTTGTGG 57.374 33.333 0.00 0.00 0.00 4.17
2754 3089 9.261035 AGACACCTACTACTACTACACTAGTAA 57.739 37.037 0.00 0.00 40.49 2.24
2760 3095 5.942826 ACCAAGACACCTACTACTACTACAC 59.057 44.000 0.00 0.00 0.00 2.90
2781 3135 4.092279 TGGAATAAATGCAATCACCACCA 58.908 39.130 0.00 0.00 0.00 4.17
2846 3202 6.642707 ACATGAATTCCGTAAGAACCAAAA 57.357 33.333 0.00 0.00 37.29 2.44
2855 3293 6.097839 ACTCCTAAGCTACATGAATTCCGTAA 59.902 38.462 0.00 0.00 0.00 3.18
2859 3297 7.631717 AAAACTCCTAAGCTACATGAATTCC 57.368 36.000 0.00 0.00 0.00 3.01
2865 3303 7.041098 ACACAAGAAAAACTCCTAAGCTACATG 60.041 37.037 0.00 0.00 0.00 3.21
2871 3309 7.203255 ACATACACAAGAAAAACTCCTAAGC 57.797 36.000 0.00 0.00 0.00 3.09
2875 3313 8.691661 ACAATACATACACAAGAAAAACTCCT 57.308 30.769 0.00 0.00 0.00 3.69
2877 3315 8.564574 TGGACAATACATACACAAGAAAAACTC 58.435 33.333 0.00 0.00 0.00 3.01
2878 3316 8.458573 TGGACAATACATACACAAGAAAAACT 57.541 30.769 0.00 0.00 0.00 2.66
2879 3317 8.349983 ACTGGACAATACATACACAAGAAAAAC 58.650 33.333 0.00 0.00 0.00 2.43
2880 3318 8.349245 CACTGGACAATACATACACAAGAAAAA 58.651 33.333 0.00 0.00 0.00 1.94
2881 3319 7.500892 ACACTGGACAATACATACACAAGAAAA 59.499 33.333 0.00 0.00 0.00 2.29
2882 3320 6.995686 ACACTGGACAATACATACACAAGAAA 59.004 34.615 0.00 0.00 0.00 2.52
2883 3321 6.530120 ACACTGGACAATACATACACAAGAA 58.470 36.000 0.00 0.00 0.00 2.52
2884 3322 6.109156 ACACTGGACAATACATACACAAGA 57.891 37.500 0.00 0.00 0.00 3.02
2885 3323 6.801539 AACACTGGACAATACATACACAAG 57.198 37.500 0.00 0.00 0.00 3.16
2886 3324 7.067615 ACAAAACACTGGACAATACATACACAA 59.932 33.333 0.00 0.00 0.00 3.33
2887 3325 6.544197 ACAAAACACTGGACAATACATACACA 59.456 34.615 0.00 0.00 0.00 3.72
2888 3326 6.966021 ACAAAACACTGGACAATACATACAC 58.034 36.000 0.00 0.00 0.00 2.90
2889 3327 7.575414 AACAAAACACTGGACAATACATACA 57.425 32.000 0.00 0.00 0.00 2.29
2890 3328 8.234546 CCTAACAAAACACTGGACAATACATAC 58.765 37.037 0.00 0.00 0.00 2.39
2891 3329 7.094549 GCCTAACAAAACACTGGACAATACATA 60.095 37.037 0.00 0.00 0.00 2.29
2892 3330 6.294508 GCCTAACAAAACACTGGACAATACAT 60.295 38.462 0.00 0.00 0.00 2.29
2893 3331 5.009210 GCCTAACAAAACACTGGACAATACA 59.991 40.000 0.00 0.00 0.00 2.29
2894 3332 5.458015 GCCTAACAAAACACTGGACAATAC 58.542 41.667 0.00 0.00 0.00 1.89
2895 3333 4.214545 CGCCTAACAAAACACTGGACAATA 59.785 41.667 0.00 0.00 0.00 1.90
2896 3334 3.004315 CGCCTAACAAAACACTGGACAAT 59.996 43.478 0.00 0.00 0.00 2.71
2900 3338 2.623878 TCGCCTAACAAAACACTGGA 57.376 45.000 0.00 0.00 0.00 3.86
2909 3347 0.464036 AGCATCCGATCGCCTAACAA 59.536 50.000 10.32 0.00 0.00 2.83
2917 3355 2.791560 CACAGACTAAAGCATCCGATCG 59.208 50.000 8.51 8.51 0.00 3.69
2994 3432 5.798125 TGGCAATGTTTATTGAGGTTTGA 57.202 34.783 4.33 0.00 45.21 2.69
3022 3460 4.664150 AACAACCCAAAACTACACCATG 57.336 40.909 0.00 0.00 0.00 3.66
3023 3461 5.395879 GGAAAACAACCCAAAACTACACCAT 60.396 40.000 0.00 0.00 0.00 3.55
3046 3484 2.943690 CACAGAGAGAAGATTGCATGGG 59.056 50.000 0.00 0.00 0.00 4.00
3066 3504 3.882888 GGAGTCAAAACAGAACATCACCA 59.117 43.478 0.00 0.00 0.00 4.17
3083 3521 9.643693 ATGTTTCAAATTTTACATGATGGAGTC 57.356 29.630 0.00 0.00 30.51 3.36
3107 3545 6.930667 TGGTGAACATTGACATCTCATATG 57.069 37.500 0.00 0.00 0.00 1.78
3108 3651 6.016527 GCATGGTGAACATTGACATCTCATAT 60.017 38.462 0.00 0.00 37.84 1.78
3152 3695 6.567050 AGGATGTATCAATGTGCACAAATTC 58.433 36.000 25.72 15.09 0.00 2.17
3158 3701 5.124457 ACTGAAAGGATGTATCAATGTGCAC 59.876 40.000 10.75 10.75 39.30 4.57
3268 3824 8.554011 AGTTAGCAGGTTAGGGTTTCAATATTA 58.446 33.333 0.00 0.00 0.00 0.98
3271 3827 6.382919 AGTTAGCAGGTTAGGGTTTCAATA 57.617 37.500 0.00 0.00 0.00 1.90
3285 3841 1.211457 AGGCCATCTGAAGTTAGCAGG 59.789 52.381 5.01 0.00 34.20 4.85
3308 3864 0.601841 GTGGTGACCAGTTACCGGTG 60.602 60.000 19.93 1.45 41.64 4.94
3318 3874 1.057275 TAACCTGCCAGTGGTGACCA 61.057 55.000 11.74 0.00 37.93 4.02
3360 3917 2.428890 AGAGCTGCTAGTAAGTGCGAAT 59.571 45.455 0.15 0.00 32.25 3.34
3363 3920 1.135257 ACAGAGCTGCTAGTAAGTGCG 60.135 52.381 0.15 0.00 32.25 5.34
3398 3972 4.019771 ACTCCAAGAATCCCAGAAGTCTTC 60.020 45.833 4.26 4.26 0.00 2.87
3399 3973 3.913163 ACTCCAAGAATCCCAGAAGTCTT 59.087 43.478 0.00 0.00 0.00 3.01
3400 3974 3.262915 CACTCCAAGAATCCCAGAAGTCT 59.737 47.826 0.00 0.00 0.00 3.24
3401 3975 3.604582 CACTCCAAGAATCCCAGAAGTC 58.395 50.000 0.00 0.00 0.00 3.01
3402 3976 2.307098 CCACTCCAAGAATCCCAGAAGT 59.693 50.000 0.00 0.00 0.00 3.01
3403 3977 2.943199 GCCACTCCAAGAATCCCAGAAG 60.943 54.545 0.00 0.00 0.00 2.85
3404 3978 1.004745 GCCACTCCAAGAATCCCAGAA 59.995 52.381 0.00 0.00 0.00 3.02
3405 3979 0.620556 GCCACTCCAAGAATCCCAGA 59.379 55.000 0.00 0.00 0.00 3.86
3406 3980 0.329261 TGCCACTCCAAGAATCCCAG 59.671 55.000 0.00 0.00 0.00 4.45
3407 3981 0.038166 GTGCCACTCCAAGAATCCCA 59.962 55.000 0.00 0.00 0.00 4.37
3408 3982 0.038166 TGTGCCACTCCAAGAATCCC 59.962 55.000 0.00 0.00 0.00 3.85
3409 3983 1.271597 ACTGTGCCACTCCAAGAATCC 60.272 52.381 0.00 0.00 0.00 3.01
3410 3984 1.808945 CACTGTGCCACTCCAAGAATC 59.191 52.381 0.00 0.00 0.00 2.52
3411 3985 1.546323 CCACTGTGCCACTCCAAGAAT 60.546 52.381 1.29 0.00 0.00 2.40
3412 3986 0.179020 CCACTGTGCCACTCCAAGAA 60.179 55.000 1.29 0.00 0.00 2.52
3413 3987 1.451504 CCACTGTGCCACTCCAAGA 59.548 57.895 1.29 0.00 0.00 3.02
3414 3988 2.263741 GCCACTGTGCCACTCCAAG 61.264 63.158 1.29 0.00 0.00 3.61
3418 3992 0.250295 TAAGTGCCACTGTGCCACTC 60.250 55.000 22.63 6.33 0.00 3.51
3428 4002 9.503427 GTCATATTCAAAACTAATAAGTGCCAC 57.497 33.333 0.00 0.00 35.62 5.01
3446 4020 5.978934 ACGGTTATGTTTCGGTCATATTC 57.021 39.130 0.00 0.00 0.00 1.75
3455 4029 3.364062 TGCAACAAACGGTTATGTTTCG 58.636 40.909 14.45 8.86 39.94 3.46
3459 4033 2.577700 TCCTGCAACAAACGGTTATGT 58.422 42.857 0.00 0.00 37.72 2.29
3491 4068 6.402118 CGAATTTATGCTCGACTTTTCCTTCA 60.402 38.462 0.00 0.00 37.23 3.02
3640 4217 8.378421 GGTTAATTATAATAGCCTAAAGACGCG 58.622 37.037 3.53 3.53 0.00 6.01
3704 4281 1.288188 TGGGTCTCATGCTCATTCCA 58.712 50.000 0.00 0.00 0.00 3.53
3790 4367 6.095300 CACTATGGACAAAAGCACAATGGATA 59.905 38.462 0.00 0.00 0.00 2.59
3824 4401 7.825270 ACCACCTCGATGTATTAACAAATGTTA 59.175 33.333 1.96 1.96 39.58 2.41
3825 4402 6.657541 ACCACCTCGATGTATTAACAAATGTT 59.342 34.615 4.01 4.01 39.58 2.71
3826 4403 6.177610 ACCACCTCGATGTATTAACAAATGT 58.822 36.000 0.00 0.00 39.58 2.71
3860 4931 2.965572 ATTCGGGAAACAATGCATGG 57.034 45.000 0.00 0.00 0.00 3.66
3867 4938 8.398878 ACTTTGTATCTAAATTCGGGAAACAA 57.601 30.769 0.00 0.00 0.00 2.83
3886 4957 8.418662 TGTACACTCTACATAACTTGACTTTGT 58.581 33.333 0.00 0.00 0.00 2.83
3893 4964 8.948631 AATGGATGTACACTCTACATAACTTG 57.051 34.615 0.00 0.00 38.18 3.16
3904 4975 9.561069 AGGTAATATGAAAATGGATGTACACTC 57.439 33.333 0.00 0.00 0.00 3.51
3905 4976 9.342308 CAGGTAATATGAAAATGGATGTACACT 57.658 33.333 0.00 0.00 0.00 3.55
3906 4977 9.120538 ACAGGTAATATGAAAATGGATGTACAC 57.879 33.333 0.00 0.00 0.00 2.90
3991 5174 2.040012 TGGGCAACAAAAATGGATGCAT 59.960 40.909 0.00 0.00 38.73 3.96
3993 5176 2.181954 TGGGCAACAAAAATGGATGC 57.818 45.000 0.00 0.00 39.74 3.91
4017 5200 9.853555 TGACAAGTTATAATTGGCAAATTACAG 57.146 29.630 8.47 0.00 42.63 2.74
4052 5235 4.081406 TCTCCTGCACAGCACAAATTTAT 58.919 39.130 0.00 0.00 33.79 1.40
4127 5310 0.533308 TGTTTTCCAGTTCCCGACGG 60.533 55.000 6.99 6.99 0.00 4.79
4130 5313 5.174037 AGATAATGTTTTCCAGTTCCCGA 57.826 39.130 0.00 0.00 0.00 5.14
4238 5421 0.107456 CTGCTAACGATGCCAGGGAT 59.893 55.000 0.00 0.00 0.00 3.85
4239 5422 1.522092 CTGCTAACGATGCCAGGGA 59.478 57.895 0.00 0.00 0.00 4.20
4265 5448 7.714377 CACTTCATATTAGCAGGACAGATTTCT 59.286 37.037 0.00 0.00 0.00 2.52
4266 5449 7.041508 CCACTTCATATTAGCAGGACAGATTTC 60.042 40.741 0.00 0.00 0.00 2.17
4355 5543 3.418995 AGGAATTGCTGCATATAGCCAG 58.581 45.455 1.84 0.00 44.83 4.85
4361 5549 4.141321 TCTCCTTGAGGAATTGCTGCATAT 60.141 41.667 3.35 0.00 44.91 1.78
4362 5550 3.200605 TCTCCTTGAGGAATTGCTGCATA 59.799 43.478 3.35 0.00 44.91 3.14
4449 5637 2.483106 CTCCGACGACTTCTTGTACTCA 59.517 50.000 0.00 0.00 0.00 3.41
4551 5746 0.317160 AGACAACTCATCGTTCCGCA 59.683 50.000 0.00 0.00 32.27 5.69
4606 5801 7.496747 ACAGTGCCTTCTTAATAAAAAGCAAA 58.503 30.769 0.00 0.00 0.00 3.68
4623 5822 3.559171 CCCATACAGTTACAACAGTGCCT 60.559 47.826 0.87 0.00 30.90 4.75
4628 5827 9.261180 CATCTTATACCCATACAGTTACAACAG 57.739 37.037 0.00 0.00 0.00 3.16
4660 5859 9.965824 CTGTGACATGTGTTGTATATCAGTATA 57.034 33.333 1.15 0.00 39.18 1.47
4661 5860 8.695456 TCTGTGACATGTGTTGTATATCAGTAT 58.305 33.333 1.15 0.00 39.18 2.12
4662 5861 8.062065 TCTGTGACATGTGTTGTATATCAGTA 57.938 34.615 1.15 0.00 39.18 2.74
4663 5862 6.935167 TCTGTGACATGTGTTGTATATCAGT 58.065 36.000 1.15 0.00 39.18 3.41
4664 5863 7.010830 CCTTCTGTGACATGTGTTGTATATCAG 59.989 40.741 1.15 0.00 39.18 2.90
4665 5864 6.818142 CCTTCTGTGACATGTGTTGTATATCA 59.182 38.462 1.15 0.00 39.18 2.15
4666 5865 6.258727 CCCTTCTGTGACATGTGTTGTATATC 59.741 42.308 1.15 0.00 39.18 1.63
4691 5891 7.491372 TCATGTGGTTTATCAGTAGATTCGTTC 59.509 37.037 0.00 0.00 35.67 3.95
4694 5894 7.770801 TTCATGTGGTTTATCAGTAGATTCG 57.229 36.000 0.00 0.00 35.67 3.34
4696 5896 9.739276 TCTTTTCATGTGGTTTATCAGTAGATT 57.261 29.630 0.00 0.00 35.67 2.40
4717 5917 4.832823 ACCCTGGAAATCAAACGATCTTTT 59.167 37.500 0.00 0.00 0.00 2.27
4756 5958 1.443702 CGCACACGTCGAATCCTCA 60.444 57.895 0.00 0.00 33.53 3.86
4825 6027 7.831753 TCGATTTCATATTTGTTTTTAGCCCA 58.168 30.769 0.00 0.00 0.00 5.36
4828 6030 7.702348 AGGCTCGATTTCATATTTGTTTTTAGC 59.298 33.333 0.00 0.00 0.00 3.09
4829 6031 9.013490 CAGGCTCGATTTCATATTTGTTTTTAG 57.987 33.333 0.00 0.00 0.00 1.85
4830 6032 8.735315 TCAGGCTCGATTTCATATTTGTTTTTA 58.265 29.630 0.00 0.00 0.00 1.52
4831 6033 7.601856 TCAGGCTCGATTTCATATTTGTTTTT 58.398 30.769 0.00 0.00 0.00 1.94
4838 6040 6.106648 TGAGATCAGGCTCGATTTCATATT 57.893 37.500 12.70 0.00 37.73 1.28
4844 6046 3.054802 AGGTTTGAGATCAGGCTCGATTT 60.055 43.478 0.00 0.00 37.73 2.17
4849 6051 3.006247 GTTCAGGTTTGAGATCAGGCTC 58.994 50.000 0.00 0.00 34.15 4.70
4858 6060 3.809279 GCCCAAAATTGTTCAGGTTTGAG 59.191 43.478 9.99 1.90 33.70 3.02
4859 6061 3.454082 AGCCCAAAATTGTTCAGGTTTGA 59.546 39.130 9.99 0.00 33.70 2.69
4860 6062 3.807553 AGCCCAAAATTGTTCAGGTTTG 58.192 40.909 0.00 0.00 0.00 2.93
4861 6063 5.622346 TTAGCCCAAAATTGTTCAGGTTT 57.378 34.783 0.00 0.00 0.00 3.27
4862 6064 5.622346 TTTAGCCCAAAATTGTTCAGGTT 57.378 34.783 0.00 0.00 0.00 3.50
4863 6065 5.610398 CTTTTAGCCCAAAATTGTTCAGGT 58.390 37.500 0.00 0.00 35.59 4.00
4864 6066 4.452114 GCTTTTAGCCCAAAATTGTTCAGG 59.548 41.667 0.00 0.00 35.59 3.86
4865 6067 5.055812 TGCTTTTAGCCCAAAATTGTTCAG 58.944 37.500 0.00 0.00 41.51 3.02
4866 6068 5.028549 TGCTTTTAGCCCAAAATTGTTCA 57.971 34.783 0.00 0.00 41.51 3.18
4867 6069 6.370433 TTTGCTTTTAGCCCAAAATTGTTC 57.630 33.333 0.00 0.00 41.51 3.18
4868 6070 6.957920 ATTTGCTTTTAGCCCAAAATTGTT 57.042 29.167 0.00 0.00 41.51 2.83
4869 6071 7.882271 TCATATTTGCTTTTAGCCCAAAATTGT 59.118 29.630 0.00 0.00 41.51 2.71
4870 6072 8.266392 TCATATTTGCTTTTAGCCCAAAATTG 57.734 30.769 0.00 0.00 41.51 2.32
4871 6073 8.860780 TTCATATTTGCTTTTAGCCCAAAATT 57.139 26.923 0.00 0.00 41.51 1.82
4872 6074 8.860780 TTTCATATTTGCTTTTAGCCCAAAAT 57.139 26.923 0.00 0.00 41.51 1.82
4873 6075 8.860780 ATTTCATATTTGCTTTTAGCCCAAAA 57.139 26.923 0.00 0.00 41.51 2.44
4874 6076 7.277539 CGATTTCATATTTGCTTTTAGCCCAAA 59.722 33.333 0.00 0.00 41.51 3.28
4875 6077 6.756074 CGATTTCATATTTGCTTTTAGCCCAA 59.244 34.615 0.00 0.00 41.51 4.12
4876 6078 6.096141 TCGATTTCATATTTGCTTTTAGCCCA 59.904 34.615 0.00 0.00 41.51 5.36
4877 6079 6.503524 TCGATTTCATATTTGCTTTTAGCCC 58.496 36.000 0.00 0.00 41.51 5.19
4878 6080 6.142958 GCTCGATTTCATATTTGCTTTTAGCC 59.857 38.462 0.00 0.00 41.51 3.93
4879 6081 6.142958 GGCTCGATTTCATATTTGCTTTTAGC 59.857 38.462 0.00 0.00 42.82 3.09
4880 6082 7.377928 CAGGCTCGATTTCATATTTGCTTTTAG 59.622 37.037 0.00 0.00 0.00 1.85
4881 6083 7.066887 TCAGGCTCGATTTCATATTTGCTTTTA 59.933 33.333 0.00 0.00 0.00 1.52
4882 6084 6.038356 CAGGCTCGATTTCATATTTGCTTTT 58.962 36.000 0.00 0.00 0.00 2.27
4883 6085 5.357878 TCAGGCTCGATTTCATATTTGCTTT 59.642 36.000 0.00 0.00 0.00 3.51
4884 6086 4.883585 TCAGGCTCGATTTCATATTTGCTT 59.116 37.500 0.00 0.00 0.00 3.91
4885 6087 4.454678 TCAGGCTCGATTTCATATTTGCT 58.545 39.130 0.00 0.00 0.00 3.91
4886 6088 4.818534 TCAGGCTCGATTTCATATTTGC 57.181 40.909 0.00 0.00 0.00 3.68
4887 6089 6.798315 AGATCAGGCTCGATTTCATATTTG 57.202 37.500 0.00 0.00 0.00 2.32
4888 6090 8.908786 TTAAGATCAGGCTCGATTTCATATTT 57.091 30.769 0.00 0.00 0.00 1.40
4889 6091 8.778358 GTTTAAGATCAGGCTCGATTTCATATT 58.222 33.333 0.00 0.00 0.00 1.28
4890 6092 7.389053 GGTTTAAGATCAGGCTCGATTTCATAT 59.611 37.037 0.00 0.00 0.00 1.78
4891 6093 6.706270 GGTTTAAGATCAGGCTCGATTTCATA 59.294 38.462 0.00 0.00 0.00 2.15
4892 6094 5.529060 GGTTTAAGATCAGGCTCGATTTCAT 59.471 40.000 0.00 0.00 0.00 2.57
4893 6095 4.876107 GGTTTAAGATCAGGCTCGATTTCA 59.124 41.667 0.00 0.00 0.00 2.69
4894 6096 5.007136 CAGGTTTAAGATCAGGCTCGATTTC 59.993 44.000 0.00 0.00 0.00 2.17
4895 6097 4.878397 CAGGTTTAAGATCAGGCTCGATTT 59.122 41.667 0.00 0.00 0.00 2.17
4896 6098 4.162320 TCAGGTTTAAGATCAGGCTCGATT 59.838 41.667 0.00 0.00 0.00 3.34
4897 6099 3.706594 TCAGGTTTAAGATCAGGCTCGAT 59.293 43.478 0.00 0.00 0.00 3.59
4898 6100 3.096852 TCAGGTTTAAGATCAGGCTCGA 58.903 45.455 0.00 0.00 0.00 4.04
4899 6101 3.131223 TCTCAGGTTTAAGATCAGGCTCG 59.869 47.826 0.00 0.00 0.00 5.03
4900 6102 4.692228 CTCTCAGGTTTAAGATCAGGCTC 58.308 47.826 0.00 0.00 0.00 4.70
4901 6103 3.118445 GCTCTCAGGTTTAAGATCAGGCT 60.118 47.826 0.00 0.00 0.00 4.58
4902 6104 3.202097 GCTCTCAGGTTTAAGATCAGGC 58.798 50.000 0.00 0.00 0.00 4.85
4903 6105 3.131223 TCGCTCTCAGGTTTAAGATCAGG 59.869 47.826 0.00 0.00 0.00 3.86
4904 6106 4.097135 TCTCGCTCTCAGGTTTAAGATCAG 59.903 45.833 0.00 0.00 0.00 2.90
4905 6107 4.017126 TCTCGCTCTCAGGTTTAAGATCA 58.983 43.478 0.00 0.00 0.00 2.92
4906 6108 4.336993 TCTCTCGCTCTCAGGTTTAAGATC 59.663 45.833 0.00 0.00 0.00 2.75
4907 6109 4.274147 TCTCTCGCTCTCAGGTTTAAGAT 58.726 43.478 0.00 0.00 0.00 2.40
4908 6110 3.687125 TCTCTCGCTCTCAGGTTTAAGA 58.313 45.455 0.00 0.00 0.00 2.10
4909 6111 3.692101 TCTCTCTCGCTCTCAGGTTTAAG 59.308 47.826 0.00 0.00 0.00 1.85
4910 6112 3.687125 TCTCTCTCGCTCTCAGGTTTAA 58.313 45.455 0.00 0.00 0.00 1.52
4911 6113 3.351794 TCTCTCTCGCTCTCAGGTTTA 57.648 47.619 0.00 0.00 0.00 2.01
4912 6114 2.208132 TCTCTCTCGCTCTCAGGTTT 57.792 50.000 0.00 0.00 0.00 3.27
4913 6115 2.426738 CAATCTCTCTCGCTCTCAGGTT 59.573 50.000 0.00 0.00 0.00 3.50
4914 6116 2.023673 CAATCTCTCTCGCTCTCAGGT 58.976 52.381 0.00 0.00 0.00 4.00
4915 6117 2.023673 ACAATCTCTCTCGCTCTCAGG 58.976 52.381 0.00 0.00 0.00 3.86
4916 6118 2.682352 TCACAATCTCTCTCGCTCTCAG 59.318 50.000 0.00 0.00 0.00 3.35
4917 6119 2.682352 CTCACAATCTCTCTCGCTCTCA 59.318 50.000 0.00 0.00 0.00 3.27
4918 6120 2.942376 TCTCACAATCTCTCTCGCTCTC 59.058 50.000 0.00 0.00 0.00 3.20
4919 6121 2.682856 GTCTCACAATCTCTCTCGCTCT 59.317 50.000 0.00 0.00 0.00 4.09
4920 6122 2.538737 CGTCTCACAATCTCTCTCGCTC 60.539 54.545 0.00 0.00 0.00 5.03
4921 6123 1.400142 CGTCTCACAATCTCTCTCGCT 59.600 52.381 0.00 0.00 0.00 4.93
4922 6124 1.821336 CGTCTCACAATCTCTCTCGC 58.179 55.000 0.00 0.00 0.00 5.03
4923 6125 1.400142 AGCGTCTCACAATCTCTCTCG 59.600 52.381 0.00 0.00 0.00 4.04
4924 6126 3.545228 CGTAGCGTCTCACAATCTCTCTC 60.545 52.174 0.00 0.00 0.00 3.20
4925 6127 2.353269 CGTAGCGTCTCACAATCTCTCT 59.647 50.000 0.00 0.00 0.00 3.10
4926 6128 2.710760 CGTAGCGTCTCACAATCTCTC 58.289 52.381 0.00 0.00 0.00 3.20
4927 6129 2.834574 CGTAGCGTCTCACAATCTCT 57.165 50.000 0.00 0.00 0.00 3.10
5065 6271 1.071605 GCACTCTGAATGTGACCGAC 58.928 55.000 1.63 0.00 37.60 4.79
5117 6323 4.080919 TCAGCATGTAAACAGGTCAGCTAT 60.081 41.667 0.00 0.00 37.40 2.97
5254 6460 2.088423 TCGCATGTGGTAATGGAAACC 58.912 47.619 6.39 0.00 37.53 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.