Multiple sequence alignment - TraesCS1D01G328500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G328500 chr1D 100.000 2982 0 0 1 2982 420080320 420083301 0.000000e+00 5507.0
1 TraesCS1D01G328500 chr1D 81.800 489 71 7 1593 2077 420103673 420104147 7.750000e-106 394.0
2 TraesCS1D01G328500 chr1D 91.480 223 18 1 2761 2982 420095809 420096031 3.730000e-79 305.0
3 TraesCS1D01G328500 chr1D 81.073 317 52 3 1567 1883 467410519 467410827 2.300000e-61 246.0
4 TraesCS1D01G328500 chr1D 93.151 146 6 1 2663 2804 420095619 420095764 8.370000e-51 211.0
5 TraesCS1D01G328500 chr1D 90.299 134 10 2 1 133 420205950 420206081 3.950000e-39 172.0
6 TraesCS1D01G328500 chr1D 84.270 178 13 4 947 1120 467407241 467407407 3.080000e-35 159.0
7 TraesCS1D01G328500 chr1D 82.209 163 12 8 2465 2623 420095478 420095627 1.120000e-24 124.0
8 TraesCS1D01G328500 chr1B 90.796 1771 93 29 388 2127 567141910 567143641 0.000000e+00 2303.0
9 TraesCS1D01G328500 chr1B 87.071 758 53 26 409 1143 567118544 567119279 0.000000e+00 815.0
10 TraesCS1D01G328500 chr1B 83.210 405 53 5 1593 1994 567206951 567207343 1.020000e-94 357.0
11 TraesCS1D01G328500 chr1B 86.471 170 11 5 2209 2378 567144567 567144724 3.050000e-40 176.0
12 TraesCS1D01G328500 chr1B 96.552 87 3 0 2577 2663 567145116 567145202 8.610000e-31 145.0
13 TraesCS1D01G328500 chr1B 81.529 157 11 3 1 157 567213138 567213276 2.430000e-21 113.0
14 TraesCS1D01G328500 chr1B 91.139 79 6 1 2138 2215 567143697 567143775 4.070000e-19 106.0
15 TraesCS1D01G328500 chr1B 95.918 49 2 0 260 308 567121244 567121292 2.460000e-11 80.5
16 TraesCS1D01G328500 chr1B 81.720 93 13 4 1497 1586 452754461 452754370 1.150000e-09 75.0
17 TraesCS1D01G328500 chr1A 89.769 694 52 7 1444 2136 516689485 516690160 0.000000e+00 870.0
18 TraesCS1D01G328500 chr1A 86.189 572 52 14 729 1280 516687875 516688439 7.120000e-166 593.0
19 TraesCS1D01G328500 chr1A 90.520 327 23 4 2663 2982 516690881 516691206 2.750000e-115 425.0
20 TraesCS1D01G328500 chr1A 82.201 427 60 11 1591 2011 516692409 516692825 1.310000e-93 353.0
21 TraesCS1D01G328500 chr1A 82.789 337 28 12 2136 2462 516690381 516690697 1.050000e-69 274.0
22 TraesCS1D01G328500 chr1A 90.000 160 13 3 1 158 516714847 516715005 1.400000e-48 204.0
23 TraesCS1D01G328500 chr1A 89.286 140 5 4 1277 1407 516689352 516689490 1.840000e-37 167.0
24 TraesCS1D01G328500 chr1A 86.154 130 9 6 1 129 516661954 516662075 6.710000e-27 132.0
25 TraesCS1D01G328500 chr1A 84.553 123 9 7 2466 2581 516715877 516715996 2.430000e-21 113.0
26 TraesCS1D01G328500 chr7D 92.308 156 11 1 4 158 386513209 386513054 1.390000e-53 220.0
27 TraesCS1D01G328500 chr7D 88.000 100 6 5 1172 1270 87374068 87374162 2.430000e-21 113.0
28 TraesCS1D01G328500 chr7D 88.000 100 6 5 1172 1270 87377162 87377256 2.430000e-21 113.0
29 TraesCS1D01G328500 chr7D 87.879 99 6 5 1173 1270 87375626 87375719 8.740000e-21 111.0
30 TraesCS1D01G328500 chr7D 82.828 99 10 3 1497 1595 119897076 119896985 6.850000e-12 82.4
31 TraesCS1D01G328500 chr7D 82.474 97 10 3 1491 1586 174147936 174147846 8.860000e-11 78.7
32 TraesCS1D01G328500 chr2A 84.713 157 16 3 2700 2849 698829026 698828871 1.850000e-32 150.0
33 TraesCS1D01G328500 chr5D 87.000 100 7 4 1172 1270 334230879 334230973 1.130000e-19 108.0
34 TraesCS1D01G328500 chr4B 87.000 100 7 5 1172 1270 111991011 111990917 1.130000e-19 108.0
35 TraesCS1D01G328500 chr2B 86.735 98 7 4 1174 1270 53574341 53574249 1.460000e-18 104.0
36 TraesCS1D01G328500 chr4A 84.848 99 9 4 1173 1270 676360597 676360690 8.800000e-16 95.3
37 TraesCS1D01G328500 chr4D 86.076 79 6 3 1513 1586 500440112 500440034 2.460000e-11 80.5
38 TraesCS1D01G328500 chr7B 82.474 97 10 3 1491 1586 138742434 138742344 8.860000e-11 78.7
39 TraesCS1D01G328500 chr6D 81.522 92 14 2 1508 1597 96747812 96747902 4.120000e-09 73.1
40 TraesCS1D01G328500 chr6A 82.796 93 5 7 1484 1576 563741771 563741852 4.120000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G328500 chr1D 420080320 420083301 2981 False 5507.000000 5507 100.000000 1 2982 1 chr1D.!!$F1 2981
1 TraesCS1D01G328500 chr1D 420095478 420096031 553 False 213.333333 305 88.946667 2465 2982 3 chr1D.!!$F4 517
2 TraesCS1D01G328500 chr1D 467407241 467410827 3586 False 202.500000 246 82.671500 947 1883 2 chr1D.!!$F5 936
3 TraesCS1D01G328500 chr1B 567141910 567145202 3292 False 682.500000 2303 91.239500 388 2663 4 chr1B.!!$F4 2275
4 TraesCS1D01G328500 chr1B 567118544 567121292 2748 False 447.750000 815 91.494500 260 1143 2 chr1B.!!$F3 883
5 TraesCS1D01G328500 chr1A 516687875 516692825 4950 False 447.000000 870 86.792333 729 2982 6 chr1A.!!$F2 2253


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
176 177 0.026285 GCGCTAAATGCAGGTACACG 59.974 55.0 0.0 0.0 43.06 4.49 F
181 182 0.034337 AAATGCAGGTACACGGACGT 59.966 50.0 0.0 0.0 0.00 4.34 F
189 190 0.039256 GTACACGGACGTTGGCACTA 60.039 55.0 0.0 0.0 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1264 1582 0.168788 GTGGCACGCACGTACTACTA 59.831 55.000 0.00 0.00 39.55 1.82 R
1974 5866 0.832626 ATGGCGGTGTGATCAGATCA 59.167 50.000 9.21 9.21 36.84 2.92 R
2012 5904 2.747460 GCCTTCACGCATGAGGCA 60.747 61.111 15.60 0.00 43.31 4.75 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.567308 AGTCCCACTGAAGCTGCA 58.433 55.556 1.02 0.00 0.00 4.41
19 20 1.072159 AGTCCCACTGAAGCTGCAC 59.928 57.895 1.02 0.00 0.00 4.57
20 21 1.227943 GTCCCACTGAAGCTGCACA 60.228 57.895 1.02 0.62 0.00 4.57
21 22 0.819259 GTCCCACTGAAGCTGCACAA 60.819 55.000 1.02 0.00 0.00 3.33
22 23 0.535780 TCCCACTGAAGCTGCACAAG 60.536 55.000 1.02 0.00 0.00 3.16
23 24 0.820891 CCCACTGAAGCTGCACAAGT 60.821 55.000 1.02 0.00 0.00 3.16
24 25 1.027357 CCACTGAAGCTGCACAAGTT 58.973 50.000 1.02 0.00 0.00 2.66
25 26 1.406539 CCACTGAAGCTGCACAAGTTT 59.593 47.619 1.02 0.00 31.00 2.66
26 27 2.159198 CCACTGAAGCTGCACAAGTTTT 60.159 45.455 1.02 0.00 28.01 2.43
27 28 2.855963 CACTGAAGCTGCACAAGTTTTG 59.144 45.455 1.02 0.00 28.01 2.44
28 29 2.159198 ACTGAAGCTGCACAAGTTTTGG 60.159 45.455 1.02 0.00 34.12 3.28
29 30 2.098614 TGAAGCTGCACAAGTTTTGGA 58.901 42.857 1.02 0.00 34.12 3.53
30 31 2.159254 TGAAGCTGCACAAGTTTTGGAC 60.159 45.455 1.02 0.00 34.12 4.02
31 32 1.767759 AGCTGCACAAGTTTTGGACT 58.232 45.000 1.02 0.00 41.47 3.85
32 33 1.678101 AGCTGCACAAGTTTTGGACTC 59.322 47.619 1.02 0.00 37.72 3.36
33 34 1.269257 GCTGCACAAGTTTTGGACTCC 60.269 52.381 0.00 0.00 37.72 3.85
34 35 1.338020 CTGCACAAGTTTTGGACTCCC 59.662 52.381 0.00 0.00 37.72 4.30
35 36 1.064017 TGCACAAGTTTTGGACTCCCT 60.064 47.619 0.00 0.00 37.72 4.20
36 37 2.173782 TGCACAAGTTTTGGACTCCCTA 59.826 45.455 0.00 0.00 37.72 3.53
37 38 3.181434 TGCACAAGTTTTGGACTCCCTAT 60.181 43.478 0.00 0.00 37.72 2.57
38 39 3.826729 GCACAAGTTTTGGACTCCCTATT 59.173 43.478 0.00 0.00 37.72 1.73
39 40 4.082733 GCACAAGTTTTGGACTCCCTATTC 60.083 45.833 0.00 0.00 37.72 1.75
40 41 5.316987 CACAAGTTTTGGACTCCCTATTCT 58.683 41.667 0.00 0.00 37.72 2.40
41 42 5.182001 CACAAGTTTTGGACTCCCTATTCTG 59.818 44.000 0.00 0.00 37.72 3.02
42 43 4.576330 AGTTTTGGACTCCCTATTCTGG 57.424 45.455 0.00 0.00 31.20 3.86
43 44 4.175962 AGTTTTGGACTCCCTATTCTGGA 58.824 43.478 0.00 0.00 31.20 3.86
44 45 4.790790 AGTTTTGGACTCCCTATTCTGGAT 59.209 41.667 0.00 0.00 31.20 3.41
45 46 5.254032 AGTTTTGGACTCCCTATTCTGGATT 59.746 40.000 0.00 0.00 31.20 3.01
46 47 5.796502 TTTGGACTCCCTATTCTGGATTT 57.203 39.130 0.00 0.00 0.00 2.17
47 48 5.373812 TTGGACTCCCTATTCTGGATTTC 57.626 43.478 0.00 0.00 0.00 2.17
48 49 4.635473 TGGACTCCCTATTCTGGATTTCT 58.365 43.478 0.00 0.00 0.00 2.52
49 50 4.410228 TGGACTCCCTATTCTGGATTTCTG 59.590 45.833 0.00 0.00 0.00 3.02
50 51 4.202409 GGACTCCCTATTCTGGATTTCTGG 60.202 50.000 0.00 0.00 0.00 3.86
51 52 4.375313 ACTCCCTATTCTGGATTTCTGGT 58.625 43.478 0.00 0.00 0.00 4.00
52 53 4.410555 ACTCCCTATTCTGGATTTCTGGTC 59.589 45.833 0.00 0.00 0.00 4.02
53 54 3.388024 TCCCTATTCTGGATTTCTGGTCG 59.612 47.826 0.00 0.00 0.00 4.79
54 55 3.388024 CCCTATTCTGGATTTCTGGTCGA 59.612 47.826 0.00 0.00 0.00 4.20
55 56 4.040952 CCCTATTCTGGATTTCTGGTCGAT 59.959 45.833 0.00 0.00 0.00 3.59
56 57 4.993584 CCTATTCTGGATTTCTGGTCGATG 59.006 45.833 0.00 0.00 0.00 3.84
57 58 4.760530 ATTCTGGATTTCTGGTCGATGA 57.239 40.909 0.00 0.00 0.00 2.92
58 59 4.551702 TTCTGGATTTCTGGTCGATGAA 57.448 40.909 0.00 0.00 0.00 2.57
59 60 4.760530 TCTGGATTTCTGGTCGATGAAT 57.239 40.909 0.00 0.00 0.00 2.57
60 61 4.445453 TCTGGATTTCTGGTCGATGAATG 58.555 43.478 0.00 0.00 0.00 2.67
61 62 4.162131 TCTGGATTTCTGGTCGATGAATGA 59.838 41.667 0.00 0.00 0.00 2.57
62 63 4.842574 TGGATTTCTGGTCGATGAATGAA 58.157 39.130 0.00 0.00 0.00 2.57
63 64 5.252547 TGGATTTCTGGTCGATGAATGAAA 58.747 37.500 0.00 0.00 0.00 2.69
64 65 5.887598 TGGATTTCTGGTCGATGAATGAAAT 59.112 36.000 11.63 11.63 37.00 2.17
65 66 6.183360 TGGATTTCTGGTCGATGAATGAAATG 60.183 38.462 14.65 0.00 35.24 2.32
66 67 4.621068 TTCTGGTCGATGAATGAAATGC 57.379 40.909 0.00 0.00 0.00 3.56
67 68 2.945008 TCTGGTCGATGAATGAAATGCC 59.055 45.455 0.00 0.00 0.00 4.40
68 69 1.670295 TGGTCGATGAATGAAATGCCG 59.330 47.619 0.00 0.00 0.00 5.69
69 70 1.597937 GGTCGATGAATGAAATGCCGC 60.598 52.381 0.00 0.00 0.00 6.53
70 71 1.063912 GTCGATGAATGAAATGCCGCA 59.936 47.619 0.00 0.00 0.00 5.69
71 72 1.742268 TCGATGAATGAAATGCCGCAA 59.258 42.857 0.00 0.00 0.00 4.85
72 73 2.358582 TCGATGAATGAAATGCCGCAAT 59.641 40.909 0.00 0.00 0.00 3.56
73 74 2.469886 CGATGAATGAAATGCCGCAATG 59.530 45.455 0.00 0.00 0.00 2.82
74 75 1.642728 TGAATGAAATGCCGCAATGC 58.357 45.000 0.00 0.00 0.00 3.56
75 76 1.067071 TGAATGAAATGCCGCAATGCA 60.067 42.857 5.91 0.00 46.94 3.96
81 82 4.317359 TGCCGCAATGCATACTGT 57.683 50.000 5.91 0.00 36.04 3.55
82 83 1.801983 TGCCGCAATGCATACTGTG 59.198 52.632 5.91 1.80 36.04 3.66
83 84 0.676151 TGCCGCAATGCATACTGTGA 60.676 50.000 12.48 0.00 36.04 3.58
84 85 0.664761 GCCGCAATGCATACTGTGAT 59.335 50.000 12.48 0.00 0.00 3.06
85 86 1.598676 GCCGCAATGCATACTGTGATG 60.599 52.381 12.48 1.10 0.00 3.07
97 98 5.817988 CATACTGTGATGCTGAATTTCTGG 58.182 41.667 5.57 0.00 0.00 3.86
98 99 3.759581 ACTGTGATGCTGAATTTCTGGT 58.240 40.909 5.57 0.00 0.00 4.00
99 100 4.147321 ACTGTGATGCTGAATTTCTGGTT 58.853 39.130 5.57 0.00 0.00 3.67
100 101 5.316167 ACTGTGATGCTGAATTTCTGGTTA 58.684 37.500 5.57 0.00 0.00 2.85
101 102 5.948162 ACTGTGATGCTGAATTTCTGGTTAT 59.052 36.000 5.57 0.00 0.00 1.89
102 103 6.127814 ACTGTGATGCTGAATTTCTGGTTATG 60.128 38.462 5.57 0.00 0.00 1.90
103 104 5.125900 TGTGATGCTGAATTTCTGGTTATGG 59.874 40.000 5.57 0.00 0.00 2.74
104 105 5.126061 GTGATGCTGAATTTCTGGTTATGGT 59.874 40.000 5.57 0.00 0.00 3.55
105 106 5.716228 TGATGCTGAATTTCTGGTTATGGTT 59.284 36.000 5.57 0.00 0.00 3.67
106 107 6.211184 TGATGCTGAATTTCTGGTTATGGTTT 59.789 34.615 5.57 0.00 0.00 3.27
107 108 6.418057 TGCTGAATTTCTGGTTATGGTTTT 57.582 33.333 5.57 0.00 0.00 2.43
108 109 6.222389 TGCTGAATTTCTGGTTATGGTTTTG 58.778 36.000 5.57 0.00 0.00 2.44
109 110 5.639082 GCTGAATTTCTGGTTATGGTTTTGG 59.361 40.000 5.57 0.00 0.00 3.28
110 111 6.107901 TGAATTTCTGGTTATGGTTTTGGG 57.892 37.500 0.00 0.00 0.00 4.12
111 112 5.604650 TGAATTTCTGGTTATGGTTTTGGGT 59.395 36.000 0.00 0.00 0.00 4.51
112 113 6.100424 TGAATTTCTGGTTATGGTTTTGGGTT 59.900 34.615 0.00 0.00 0.00 4.11
113 114 7.290248 TGAATTTCTGGTTATGGTTTTGGGTTA 59.710 33.333 0.00 0.00 0.00 2.85
114 115 6.658188 TTTCTGGTTATGGTTTTGGGTTAG 57.342 37.500 0.00 0.00 0.00 2.34
115 116 5.586155 TCTGGTTATGGTTTTGGGTTAGA 57.414 39.130 0.00 0.00 0.00 2.10
116 117 5.566469 TCTGGTTATGGTTTTGGGTTAGAG 58.434 41.667 0.00 0.00 0.00 2.43
117 118 5.311121 TCTGGTTATGGTTTTGGGTTAGAGA 59.689 40.000 0.00 0.00 0.00 3.10
118 119 5.954757 TGGTTATGGTTTTGGGTTAGAGAA 58.045 37.500 0.00 0.00 0.00 2.87
119 120 6.374588 TGGTTATGGTTTTGGGTTAGAGAAA 58.625 36.000 0.00 0.00 0.00 2.52
120 121 6.492087 TGGTTATGGTTTTGGGTTAGAGAAAG 59.508 38.462 0.00 0.00 0.00 2.62
121 122 6.717997 GGTTATGGTTTTGGGTTAGAGAAAGA 59.282 38.462 0.00 0.00 0.00 2.52
122 123 7.231925 GGTTATGGTTTTGGGTTAGAGAAAGAA 59.768 37.037 0.00 0.00 0.00 2.52
123 124 8.635328 GTTATGGTTTTGGGTTAGAGAAAGAAA 58.365 33.333 0.00 0.00 0.00 2.52
124 125 7.855784 ATGGTTTTGGGTTAGAGAAAGAAAT 57.144 32.000 0.00 0.00 0.00 2.17
125 126 7.669089 TGGTTTTGGGTTAGAGAAAGAAATT 57.331 32.000 0.00 0.00 0.00 1.82
126 127 7.722363 TGGTTTTGGGTTAGAGAAAGAAATTC 58.278 34.615 0.00 0.00 38.39 2.17
140 141 8.329203 AGAAAGAAATTCTGTAAAGGCTACAG 57.671 34.615 10.55 10.55 46.71 2.74
141 142 7.939588 AGAAAGAAATTCTGTAAAGGCTACAGT 59.060 33.333 15.20 0.00 46.71 3.55
142 143 8.465273 AAAGAAATTCTGTAAAGGCTACAGTT 57.535 30.769 15.20 4.81 43.84 3.16
143 144 9.569122 AAAGAAATTCTGTAAAGGCTACAGTTA 57.431 29.630 15.20 7.20 43.84 2.24
144 145 8.779354 AGAAATTCTGTAAAGGCTACAGTTAG 57.221 34.615 15.20 0.00 43.84 2.34
158 159 1.933853 CAGTTAGCTGTAACCGGATGC 59.066 52.381 9.46 0.00 39.65 3.91
159 160 0.928229 GTTAGCTGTAACCGGATGCG 59.072 55.000 9.46 0.00 33.58 4.73
160 161 0.808453 TTAGCTGTAACCGGATGCGC 60.808 55.000 9.46 8.53 0.00 6.09
161 162 1.672854 TAGCTGTAACCGGATGCGCT 61.673 55.000 9.46 15.66 0.00 5.92
162 163 1.227147 GCTGTAACCGGATGCGCTA 60.227 57.895 9.46 0.00 0.00 4.26
163 164 0.808453 GCTGTAACCGGATGCGCTAA 60.808 55.000 9.46 0.00 0.00 3.09
164 165 1.647346 CTGTAACCGGATGCGCTAAA 58.353 50.000 9.46 0.00 0.00 1.85
165 166 2.210116 CTGTAACCGGATGCGCTAAAT 58.790 47.619 9.46 0.00 0.00 1.40
166 167 1.937223 TGTAACCGGATGCGCTAAATG 59.063 47.619 9.46 0.00 0.00 2.32
167 168 0.941542 TAACCGGATGCGCTAAATGC 59.058 50.000 9.46 0.00 38.57 3.56
169 170 1.280746 CCGGATGCGCTAAATGCAG 59.719 57.895 9.73 0.00 46.98 4.41
170 171 1.280746 CGGATGCGCTAAATGCAGG 59.719 57.895 9.73 0.00 46.98 4.85
171 172 1.439353 CGGATGCGCTAAATGCAGGT 61.439 55.000 9.73 0.00 46.98 4.00
172 173 1.593196 GGATGCGCTAAATGCAGGTA 58.407 50.000 9.73 0.00 46.98 3.08
173 174 1.264288 GGATGCGCTAAATGCAGGTAC 59.736 52.381 9.73 0.00 46.98 3.34
174 175 1.939934 GATGCGCTAAATGCAGGTACA 59.060 47.619 9.73 0.00 46.98 2.90
175 176 1.083489 TGCGCTAAATGCAGGTACAC 58.917 50.000 9.73 0.00 43.06 2.90
176 177 0.026285 GCGCTAAATGCAGGTACACG 59.974 55.000 0.00 0.00 43.06 4.49
177 178 0.650512 CGCTAAATGCAGGTACACGG 59.349 55.000 0.00 0.00 43.06 4.94
178 179 1.737696 CGCTAAATGCAGGTACACGGA 60.738 52.381 0.00 0.00 43.06 4.69
179 180 1.664151 GCTAAATGCAGGTACACGGAC 59.336 52.381 0.00 0.00 42.31 4.79
180 181 1.924524 CTAAATGCAGGTACACGGACG 59.075 52.381 0.00 0.00 0.00 4.79
181 182 0.034337 AAATGCAGGTACACGGACGT 59.966 50.000 0.00 0.00 0.00 4.34
182 183 0.034337 AATGCAGGTACACGGACGTT 59.966 50.000 0.00 0.00 0.00 3.99
183 184 0.669318 ATGCAGGTACACGGACGTTG 60.669 55.000 0.00 0.00 0.00 4.10
184 185 2.025418 GCAGGTACACGGACGTTGG 61.025 63.158 0.00 0.00 0.00 3.77
185 186 2.025418 CAGGTACACGGACGTTGGC 61.025 63.158 0.00 0.00 0.00 4.52
186 187 2.029369 GGTACACGGACGTTGGCA 59.971 61.111 0.00 0.00 0.00 4.92
187 188 2.312436 GGTACACGGACGTTGGCAC 61.312 63.158 0.00 0.00 0.00 5.01
188 189 1.300388 GTACACGGACGTTGGCACT 60.300 57.895 0.00 0.00 0.00 4.40
189 190 0.039256 GTACACGGACGTTGGCACTA 60.039 55.000 0.00 0.00 0.00 2.74
190 191 0.672889 TACACGGACGTTGGCACTAA 59.327 50.000 0.00 0.00 0.00 2.24
191 192 0.179078 ACACGGACGTTGGCACTAAA 60.179 50.000 0.00 0.00 0.00 1.85
192 193 1.153353 CACGGACGTTGGCACTAAAT 58.847 50.000 0.00 0.00 0.00 1.40
193 194 1.533731 CACGGACGTTGGCACTAAATT 59.466 47.619 0.00 0.00 0.00 1.82
194 195 1.533731 ACGGACGTTGGCACTAAATTG 59.466 47.619 0.00 0.00 0.00 2.32
195 196 1.801771 CGGACGTTGGCACTAAATTGA 59.198 47.619 0.00 0.00 0.00 2.57
196 197 2.224549 CGGACGTTGGCACTAAATTGAA 59.775 45.455 0.00 0.00 0.00 2.69
197 198 3.666902 CGGACGTTGGCACTAAATTGAAG 60.667 47.826 0.00 0.00 0.00 3.02
198 199 3.500680 GGACGTTGGCACTAAATTGAAGA 59.499 43.478 0.00 0.00 0.00 2.87
199 200 4.023536 GGACGTTGGCACTAAATTGAAGAA 60.024 41.667 0.00 0.00 0.00 2.52
200 201 5.108385 ACGTTGGCACTAAATTGAAGAAG 57.892 39.130 0.00 0.00 0.00 2.85
201 202 3.914364 CGTTGGCACTAAATTGAAGAAGC 59.086 43.478 0.00 0.00 0.00 3.86
202 203 4.556501 CGTTGGCACTAAATTGAAGAAGCA 60.557 41.667 0.00 0.00 0.00 3.91
203 204 5.288804 GTTGGCACTAAATTGAAGAAGCAA 58.711 37.500 0.00 0.00 0.00 3.91
204 205 5.528043 TGGCACTAAATTGAAGAAGCAAA 57.472 34.783 0.00 0.00 0.00 3.68
205 206 5.288804 TGGCACTAAATTGAAGAAGCAAAC 58.711 37.500 0.00 0.00 0.00 2.93
206 207 5.163468 TGGCACTAAATTGAAGAAGCAAACA 60.163 36.000 0.00 0.00 0.00 2.83
207 208 5.403466 GGCACTAAATTGAAGAAGCAAACAG 59.597 40.000 0.00 0.00 0.00 3.16
208 209 5.403466 GCACTAAATTGAAGAAGCAAACAGG 59.597 40.000 0.00 0.00 0.00 4.00
209 210 5.403466 CACTAAATTGAAGAAGCAAACAGGC 59.597 40.000 0.00 0.00 0.00 4.85
210 211 3.391506 AATTGAAGAAGCAAACAGGCC 57.608 42.857 0.00 0.00 0.00 5.19
211 212 2.071778 TTGAAGAAGCAAACAGGCCT 57.928 45.000 0.00 0.00 0.00 5.19
212 213 2.071778 TGAAGAAGCAAACAGGCCTT 57.928 45.000 0.00 0.00 0.00 4.35
213 214 3.222173 TGAAGAAGCAAACAGGCCTTA 57.778 42.857 0.00 0.00 0.00 2.69
214 215 3.561143 TGAAGAAGCAAACAGGCCTTAA 58.439 40.909 0.00 0.00 0.00 1.85
215 216 3.957497 TGAAGAAGCAAACAGGCCTTAAA 59.043 39.130 0.00 0.00 0.00 1.52
216 217 4.404073 TGAAGAAGCAAACAGGCCTTAAAA 59.596 37.500 0.00 0.00 0.00 1.52
217 218 4.590850 AGAAGCAAACAGGCCTTAAAAG 57.409 40.909 0.00 0.00 0.00 2.27
218 219 3.960755 AGAAGCAAACAGGCCTTAAAAGT 59.039 39.130 0.00 0.00 0.00 2.66
219 220 5.137551 AGAAGCAAACAGGCCTTAAAAGTA 58.862 37.500 0.00 0.00 0.00 2.24
220 221 5.241728 AGAAGCAAACAGGCCTTAAAAGTAG 59.758 40.000 0.00 0.00 0.00 2.57
221 222 4.725490 AGCAAACAGGCCTTAAAAGTAGA 58.275 39.130 0.00 0.00 0.00 2.59
222 223 5.325239 AGCAAACAGGCCTTAAAAGTAGAT 58.675 37.500 0.00 0.00 0.00 1.98
223 224 6.481643 AGCAAACAGGCCTTAAAAGTAGATA 58.518 36.000 0.00 0.00 0.00 1.98
224 225 6.374613 AGCAAACAGGCCTTAAAAGTAGATAC 59.625 38.462 0.00 0.00 0.00 2.24
225 226 6.404403 GCAAACAGGCCTTAAAAGTAGATACC 60.404 42.308 0.00 0.00 0.00 2.73
226 227 6.382919 AACAGGCCTTAAAAGTAGATACCA 57.617 37.500 0.00 0.00 0.00 3.25
227 228 5.742063 ACAGGCCTTAAAAGTAGATACCAC 58.258 41.667 0.00 0.00 0.00 4.16
228 229 5.487845 ACAGGCCTTAAAAGTAGATACCACT 59.512 40.000 0.00 0.00 0.00 4.00
229 230 6.670902 ACAGGCCTTAAAAGTAGATACCACTA 59.329 38.462 0.00 0.00 0.00 2.74
230 231 7.347485 ACAGGCCTTAAAAGTAGATACCACTAT 59.653 37.037 0.00 0.00 0.00 2.12
231 232 8.867097 CAGGCCTTAAAAGTAGATACCACTATA 58.133 37.037 0.00 0.00 0.00 1.31
232 233 8.868103 AGGCCTTAAAAGTAGATACCACTATAC 58.132 37.037 0.00 0.00 0.00 1.47
233 234 8.645110 GGCCTTAAAAGTAGATACCACTATACA 58.355 37.037 0.00 0.00 0.00 2.29
266 267 5.738118 AATCACGAAACCAAAACGTAAGA 57.262 34.783 0.00 0.00 43.62 2.10
267 268 4.782252 TCACGAAACCAAAACGTAAGAG 57.218 40.909 0.00 0.00 43.62 2.85
268 269 4.431809 TCACGAAACCAAAACGTAAGAGA 58.568 39.130 0.00 0.00 43.62 3.10
269 270 5.051816 TCACGAAACCAAAACGTAAGAGAT 58.948 37.500 0.00 0.00 43.62 2.75
270 271 5.176223 TCACGAAACCAAAACGTAAGAGATC 59.824 40.000 0.00 0.00 43.62 2.75
271 272 4.149396 ACGAAACCAAAACGTAAGAGATCG 59.851 41.667 0.00 0.00 43.62 3.69
272 273 4.149396 CGAAACCAAAACGTAAGAGATCGT 59.851 41.667 0.00 0.00 42.12 3.73
273 274 5.587033 AAACCAAAACGTAAGAGATCGTC 57.413 39.130 0.00 0.00 39.39 4.20
274 275 3.582780 ACCAAAACGTAAGAGATCGTCC 58.417 45.455 0.00 0.00 39.39 4.79
275 276 3.006110 ACCAAAACGTAAGAGATCGTCCA 59.994 43.478 0.00 0.00 39.39 4.02
276 277 4.181578 CCAAAACGTAAGAGATCGTCCAT 58.818 43.478 0.00 0.00 39.39 3.41
277 278 4.032900 CCAAAACGTAAGAGATCGTCCATG 59.967 45.833 0.00 0.00 39.39 3.66
278 279 4.713824 AAACGTAAGAGATCGTCCATGA 57.286 40.909 0.00 0.00 39.39 3.07
279 280 4.920640 AACGTAAGAGATCGTCCATGAT 57.079 40.909 0.00 0.00 39.39 2.45
280 281 4.920640 ACGTAAGAGATCGTCCATGATT 57.079 40.909 0.00 0.00 43.62 2.57
281 282 5.263968 ACGTAAGAGATCGTCCATGATTT 57.736 39.130 0.00 0.00 43.62 2.17
282 283 5.043903 ACGTAAGAGATCGTCCATGATTTG 58.956 41.667 0.00 0.00 43.62 2.32
283 284 5.043903 CGTAAGAGATCGTCCATGATTTGT 58.956 41.667 0.00 0.00 43.02 2.83
284 285 6.183360 ACGTAAGAGATCGTCCATGATTTGTA 60.183 38.462 0.00 0.00 43.62 2.41
285 286 6.863645 CGTAAGAGATCGTCCATGATTTGTAT 59.136 38.462 0.00 0.00 43.02 2.29
286 287 7.148902 CGTAAGAGATCGTCCATGATTTGTATG 60.149 40.741 0.00 0.00 43.02 2.39
287 288 5.545588 AGAGATCGTCCATGATTTGTATGG 58.454 41.667 0.00 0.00 45.17 2.74
288 289 5.070981 AGAGATCGTCCATGATTTGTATGGT 59.929 40.000 0.00 0.00 44.35 3.55
289 290 5.059161 AGATCGTCCATGATTTGTATGGTG 58.941 41.667 0.00 0.00 44.35 4.17
290 291 2.942376 TCGTCCATGATTTGTATGGTGC 59.058 45.455 0.00 0.00 44.35 5.01
291 292 2.682352 CGTCCATGATTTGTATGGTGCA 59.318 45.455 0.00 0.00 44.35 4.57
292 293 3.128415 CGTCCATGATTTGTATGGTGCAA 59.872 43.478 0.00 0.00 44.35 4.08
293 294 4.380339 CGTCCATGATTTGTATGGTGCAAA 60.380 41.667 0.00 0.00 44.35 3.68
294 295 5.663456 GTCCATGATTTGTATGGTGCAAAT 58.337 37.500 5.84 5.84 45.73 2.32
295 296 5.521010 GTCCATGATTTGTATGGTGCAAATG 59.479 40.000 10.07 0.00 43.87 2.32
296 297 5.187381 TCCATGATTTGTATGGTGCAAATGT 59.813 36.000 10.07 0.00 43.87 2.71
297 298 6.379417 TCCATGATTTGTATGGTGCAAATGTA 59.621 34.615 10.07 1.66 43.87 2.29
298 299 6.698329 CCATGATTTGTATGGTGCAAATGTAG 59.302 38.462 10.07 1.59 43.87 2.74
299 300 6.832520 TGATTTGTATGGTGCAAATGTAGT 57.167 33.333 10.07 0.00 43.87 2.73
300 301 7.929941 TGATTTGTATGGTGCAAATGTAGTA 57.070 32.000 10.07 0.00 43.87 1.82
301 302 8.341892 TGATTTGTATGGTGCAAATGTAGTAA 57.658 30.769 10.07 0.00 43.87 2.24
302 303 8.797438 TGATTTGTATGGTGCAAATGTAGTAAA 58.203 29.630 10.07 0.00 43.87 2.01
303 304 9.801873 GATTTGTATGGTGCAAATGTAGTAAAT 57.198 29.630 10.07 0.00 43.87 1.40
304 305 9.801873 ATTTGTATGGTGCAAATGTAGTAAATC 57.198 29.630 5.42 0.00 42.72 2.17
305 306 7.929941 TGTATGGTGCAAATGTAGTAAATCA 57.070 32.000 0.00 0.00 0.00 2.57
306 307 7.984391 TGTATGGTGCAAATGTAGTAAATCAG 58.016 34.615 0.00 0.00 0.00 2.90
307 308 7.826744 TGTATGGTGCAAATGTAGTAAATCAGA 59.173 33.333 0.00 0.00 0.00 3.27
308 309 7.701539 ATGGTGCAAATGTAGTAAATCAGAA 57.298 32.000 0.00 0.00 0.00 3.02
309 310 6.908825 TGGTGCAAATGTAGTAAATCAGAAC 58.091 36.000 0.00 0.00 0.00 3.01
310 311 6.072175 TGGTGCAAATGTAGTAAATCAGAACC 60.072 38.462 0.00 0.00 0.00 3.62
311 312 6.151144 GGTGCAAATGTAGTAAATCAGAACCT 59.849 38.462 0.00 0.00 0.00 3.50
312 313 7.023575 GTGCAAATGTAGTAAATCAGAACCTG 58.976 38.462 0.00 0.00 0.00 4.00
313 314 6.150976 TGCAAATGTAGTAAATCAGAACCTGG 59.849 38.462 0.00 0.00 31.51 4.45
314 315 6.151144 GCAAATGTAGTAAATCAGAACCTGGT 59.849 38.462 0.00 0.00 31.51 4.00
315 316 7.626452 GCAAATGTAGTAAATCAGAACCTGGTC 60.626 40.741 0.00 0.00 31.51 4.02
316 317 6.875972 ATGTAGTAAATCAGAACCTGGTCT 57.124 37.500 0.00 0.00 31.51 3.85
317 318 6.282199 TGTAGTAAATCAGAACCTGGTCTC 57.718 41.667 0.00 0.20 31.51 3.36
318 319 4.828072 AGTAAATCAGAACCTGGTCTCC 57.172 45.455 0.00 0.00 31.51 3.71
319 320 4.430441 AGTAAATCAGAACCTGGTCTCCT 58.570 43.478 0.00 0.00 31.51 3.69
320 321 4.846940 AGTAAATCAGAACCTGGTCTCCTT 59.153 41.667 0.00 0.00 31.51 3.36
321 322 4.731313 AAATCAGAACCTGGTCTCCTTT 57.269 40.909 0.00 0.00 31.51 3.11
322 323 4.731313 AATCAGAACCTGGTCTCCTTTT 57.269 40.909 0.00 0.00 31.51 2.27
323 324 4.731313 ATCAGAACCTGGTCTCCTTTTT 57.269 40.909 0.00 0.00 31.51 1.94
345 346 7.945033 TTTTGTTTAATTTGCTTCAGCCTAG 57.055 32.000 0.00 0.00 41.18 3.02
346 347 6.648879 TTGTTTAATTTGCTTCAGCCTAGT 57.351 33.333 0.00 0.00 41.18 2.57
347 348 7.753309 TTGTTTAATTTGCTTCAGCCTAGTA 57.247 32.000 0.00 0.00 41.18 1.82
348 349 7.753309 TGTTTAATTTGCTTCAGCCTAGTAA 57.247 32.000 0.00 0.00 41.18 2.24
349 350 8.348285 TGTTTAATTTGCTTCAGCCTAGTAAT 57.652 30.769 0.00 0.00 41.18 1.89
350 351 8.458843 TGTTTAATTTGCTTCAGCCTAGTAATC 58.541 33.333 0.00 0.00 41.18 1.75
351 352 8.678199 GTTTAATTTGCTTCAGCCTAGTAATCT 58.322 33.333 0.00 0.00 41.18 2.40
352 353 6.934048 AATTTGCTTCAGCCTAGTAATCTC 57.066 37.500 0.00 0.00 41.18 2.75
353 354 5.683876 TTTGCTTCAGCCTAGTAATCTCT 57.316 39.130 0.00 0.00 41.18 3.10
354 355 4.927978 TGCTTCAGCCTAGTAATCTCTC 57.072 45.455 0.00 0.00 41.18 3.20
355 356 3.639094 TGCTTCAGCCTAGTAATCTCTCC 59.361 47.826 0.00 0.00 41.18 3.71
356 357 3.895041 GCTTCAGCCTAGTAATCTCTCCT 59.105 47.826 0.00 0.00 34.31 3.69
357 358 4.022329 GCTTCAGCCTAGTAATCTCTCCTC 60.022 50.000 0.00 0.00 34.31 3.71
358 359 4.107127 TCAGCCTAGTAATCTCTCCTCC 57.893 50.000 0.00 0.00 0.00 4.30
359 360 3.463704 TCAGCCTAGTAATCTCTCCTCCA 59.536 47.826 0.00 0.00 0.00 3.86
360 361 3.572255 CAGCCTAGTAATCTCTCCTCCAC 59.428 52.174 0.00 0.00 0.00 4.02
361 362 2.554893 GCCTAGTAATCTCTCCTCCACG 59.445 54.545 0.00 0.00 0.00 4.94
362 363 3.150767 CCTAGTAATCTCTCCTCCACGG 58.849 54.545 0.00 0.00 0.00 4.94
363 364 2.830651 AGTAATCTCTCCTCCACGGT 57.169 50.000 0.00 0.00 0.00 4.83
364 365 3.103080 AGTAATCTCTCCTCCACGGTT 57.897 47.619 0.00 0.00 0.00 4.44
365 366 2.761208 AGTAATCTCTCCTCCACGGTTG 59.239 50.000 0.00 0.00 0.00 3.77
366 367 0.250513 AATCTCTCCTCCACGGTTGC 59.749 55.000 0.00 0.00 0.00 4.17
367 368 0.904865 ATCTCTCCTCCACGGTTGCA 60.905 55.000 0.00 0.00 0.00 4.08
368 369 1.079543 CTCTCCTCCACGGTTGCAG 60.080 63.158 0.00 0.00 0.00 4.41
369 370 2.743928 CTCCTCCACGGTTGCAGC 60.744 66.667 0.00 0.00 0.00 5.25
370 371 4.329545 TCCTCCACGGTTGCAGCC 62.330 66.667 10.00 10.00 0.00 4.85
371 372 4.641645 CCTCCACGGTTGCAGCCA 62.642 66.667 20.42 0.00 0.00 4.75
372 373 2.360350 CTCCACGGTTGCAGCCAT 60.360 61.111 20.42 0.00 0.00 4.40
373 374 2.672651 TCCACGGTTGCAGCCATG 60.673 61.111 20.42 14.90 0.00 3.66
374 375 2.985282 CCACGGTTGCAGCCATGT 60.985 61.111 20.42 7.36 0.00 3.21
375 376 2.256158 CACGGTTGCAGCCATGTG 59.744 61.111 20.42 15.74 0.00 3.21
376 377 2.203337 ACGGTTGCAGCCATGTGT 60.203 55.556 20.42 6.21 0.00 3.72
377 378 2.260869 ACGGTTGCAGCCATGTGTC 61.261 57.895 20.42 0.00 0.00 3.67
378 379 1.968017 CGGTTGCAGCCATGTGTCT 60.968 57.895 20.42 0.00 0.00 3.41
379 380 1.582968 GGTTGCAGCCATGTGTCTG 59.417 57.895 15.64 0.00 0.00 3.51
383 384 2.753043 CAGCCATGTGTCTGCCCC 60.753 66.667 0.00 0.00 0.00 5.80
384 385 4.052518 AGCCATGTGTCTGCCCCC 62.053 66.667 0.00 0.00 0.00 5.40
412 413 4.219070 CCAAGCAATGATGTGAAGAAAGGA 59.781 41.667 0.00 0.00 0.00 3.36
414 415 5.640189 AGCAATGATGTGAAGAAAGGAAG 57.360 39.130 0.00 0.00 0.00 3.46
415 416 5.319453 AGCAATGATGTGAAGAAAGGAAGA 58.681 37.500 0.00 0.00 0.00 2.87
416 417 5.771666 AGCAATGATGTGAAGAAAGGAAGAA 59.228 36.000 0.00 0.00 0.00 2.52
418 419 6.925165 GCAATGATGTGAAGAAAGGAAGAAAA 59.075 34.615 0.00 0.00 0.00 2.29
419 420 7.601508 GCAATGATGTGAAGAAAGGAAGAAAAT 59.398 33.333 0.00 0.00 0.00 1.82
446 447 8.804912 AAAAATCTCTGAAGCTGTCTGAATAT 57.195 30.769 0.00 0.00 34.16 1.28
480 481 4.647564 AAGAATGACACCTGAATCCAGT 57.352 40.909 0.00 0.00 38.74 4.00
532 538 1.137614 GCGCGAGAGAGATGACACA 59.862 57.895 12.10 0.00 0.00 3.72
552 558 2.870372 CAGCCAAACTGCCGTAGC 59.130 61.111 0.00 0.00 40.19 3.58
596 602 3.960102 CCCATTTGCCATGTATAACCTGT 59.040 43.478 0.00 0.00 0.00 4.00
597 603 4.405358 CCCATTTGCCATGTATAACCTGTT 59.595 41.667 0.00 0.00 0.00 3.16
600 606 2.912771 TGCCATGTATAACCTGTTCGG 58.087 47.619 0.00 0.00 39.35 4.30
608 614 5.623169 TGTATAACCTGTTCGGGTTTTTCT 58.377 37.500 19.25 6.98 46.21 2.52
701 718 3.215151 TGGTTAGAGATGTCTAGCGGAG 58.785 50.000 7.50 0.00 37.37 4.63
702 719 2.554893 GGTTAGAGATGTCTAGCGGAGG 59.445 54.545 7.50 0.00 37.37 4.30
703 720 3.478509 GTTAGAGATGTCTAGCGGAGGA 58.521 50.000 0.00 0.00 36.61 3.71
704 721 2.738587 AGAGATGTCTAGCGGAGGAA 57.261 50.000 0.00 0.00 0.00 3.36
705 722 2.303175 AGAGATGTCTAGCGGAGGAAC 58.697 52.381 0.00 0.00 0.00 3.62
706 723 1.002251 GAGATGTCTAGCGGAGGAACG 60.002 57.143 0.00 0.00 0.00 3.95
841 866 1.719766 GTTTAACCGTGCGTGCGTG 60.720 57.895 0.00 0.00 0.00 5.34
874 899 1.154112 CCCGGCGAATTTTCCAACG 60.154 57.895 9.30 0.00 0.00 4.10
898 923 4.383552 GGAATCTGTGATGTCAAGGCTAGT 60.384 45.833 0.00 0.00 0.00 2.57
978 1019 0.759959 CATCTGCCTGGAGAGAGCAT 59.240 55.000 0.00 0.00 35.64 3.79
987 1031 3.008157 CCTGGAGAGAGCATTGCATCTAT 59.992 47.826 11.91 8.02 29.39 1.98
990 1034 4.247258 GGAGAGAGCATTGCATCTATCAG 58.753 47.826 22.45 0.00 35.87 2.90
992 1036 3.071167 AGAGAGCATTGCATCTATCAGCA 59.929 43.478 11.91 0.00 39.32 4.41
993 1037 4.004314 GAGAGCATTGCATCTATCAGCAT 58.996 43.478 11.91 0.00 40.94 3.79
1071 1134 0.833949 AGGCTCTAGGTAAGCAAGCC 59.166 55.000 8.04 8.04 41.66 4.35
1102 1173 0.996462 GAAAATGTCGGTCGATCGCA 59.004 50.000 14.58 15.15 0.00 5.10
1264 1582 2.213499 GCAAATAGCGTATCAGGCAGT 58.787 47.619 0.00 0.00 0.00 4.40
1424 2663 1.338020 GTGCTCCCCAAAAGAGTTGTG 59.662 52.381 0.00 0.00 33.69 3.33
1425 2664 1.064017 TGCTCCCCAAAAGAGTTGTGT 60.064 47.619 0.00 0.00 33.69 3.72
1506 5328 2.036089 GTCAAGTTTCCACTCTCTCGGT 59.964 50.000 0.00 0.00 30.45 4.69
1714 5606 4.742201 GCGTCTTCGGCTCTGGCA 62.742 66.667 0.00 0.00 40.87 4.92
1715 5607 2.507992 CGTCTTCGGCTCTGGCAG 60.508 66.667 8.58 8.58 40.87 4.85
1734 5626 1.605058 GCTCTGGCGGTAGTCAAGGA 61.605 60.000 0.00 0.00 0.00 3.36
1749 5641 2.581354 GGATGCACCTCTGCTCGT 59.419 61.111 0.00 0.00 44.57 4.18
1919 5811 2.444421 CCTTGTCCTACACCGTCTACT 58.556 52.381 0.00 0.00 0.00 2.57
1942 5834 1.642215 CATCCTCGACGACGACGAT 59.358 57.895 21.45 13.72 43.81 3.73
1945 5837 1.296722 CCTCGACGACGACGATGAC 60.297 63.158 21.45 1.87 43.81 3.06
1962 5854 4.039357 CGACGACCAGTCCAGCGT 62.039 66.667 0.00 0.00 46.92 5.07
1974 5866 2.512286 CAGCGTCGGTGGCATCAT 60.512 61.111 16.53 0.00 0.00 2.45
2012 5904 1.356124 TCTTCTTCTTCTGCCTGCCT 58.644 50.000 0.00 0.00 0.00 4.75
2027 5919 2.758089 GCCTGCCTCATGCGTGAAG 61.758 63.158 10.41 5.00 45.60 3.02
2034 5926 1.159285 CTCATGCGTGAAGGCTTTGA 58.841 50.000 10.41 0.00 33.05 2.69
2063 5955 1.802960 CCATCGACCTATGAAGCATGC 59.197 52.381 10.51 10.51 0.00 4.06
2179 6297 2.988493 GTGTGACTTTGTAACGCGGATA 59.012 45.455 12.47 0.00 0.00 2.59
2251 7168 1.941812 GTGAGTTGTCACGGGCAAG 59.058 57.895 0.00 0.00 43.75 4.01
2296 7213 8.846943 AAGTTGTGTTATCAGTTATCACATCA 57.153 30.769 0.00 0.00 39.23 3.07
2297 7214 9.453572 AAGTTGTGTTATCAGTTATCACATCAT 57.546 29.630 0.00 0.00 39.23 2.45
2298 7215 9.453572 AGTTGTGTTATCAGTTATCACATCATT 57.546 29.630 0.00 0.00 39.23 2.57
2342 7259 2.162809 ACAAGGACGTTTGTTTCGCTTT 59.837 40.909 0.00 0.00 38.05 3.51
2355 7272 4.170256 GTTTCGCTTTCTTGGACAACAAA 58.830 39.130 0.00 0.00 38.91 2.83
2378 7296 2.398554 CGGTGGCGCAGTTAGCAAT 61.399 57.895 10.83 0.00 46.13 3.56
2389 7349 3.364062 CAGTTAGCAATCTCGTAGGTCG 58.636 50.000 0.00 0.00 41.41 4.79
2393 7353 0.855349 GCAATCTCGTAGGTCGCATG 59.145 55.000 0.00 0.00 39.67 4.06
2428 7408 2.446848 CGAGCCATCCTCACCCCAT 61.447 63.158 0.00 0.00 40.78 4.00
2437 7417 3.713826 TCCTCACCCCATACTTGAAAC 57.286 47.619 0.00 0.00 0.00 2.78
2444 7427 2.682856 CCCCATACTTGAAACGACCATG 59.317 50.000 0.00 0.00 0.00 3.66
2462 7445 2.254546 TGGTTGTGATGAAACGCTCT 57.745 45.000 0.00 0.00 0.00 4.09
2537 7557 5.432885 TTGTTTTGAAGGTAGTTGCTAGC 57.567 39.130 8.10 8.10 35.02 3.42
2538 7558 4.714632 TGTTTTGAAGGTAGTTGCTAGCT 58.285 39.130 17.23 0.00 45.16 3.32
2555 7575 2.003196 GCTGTAGCTCCACTCTGAAC 57.997 55.000 0.00 0.00 38.21 3.18
2588 8206 6.127338 GGGGAAGTCTGAATTATCCTTTTTGG 60.127 42.308 8.77 0.00 37.10 3.28
2742 8370 9.476761 ACTTTTACAAAAACTTTTACGTACTCG 57.523 29.630 0.00 0.00 43.34 4.18
2763 8395 3.381335 GAAGAGGGATAGTAACCACCCA 58.619 50.000 0.00 0.00 44.25 4.51
2771 8403 2.337359 AGTAACCACCCAGGAGCTAA 57.663 50.000 0.00 0.00 41.22 3.09
2816 8536 5.517411 CGATTGTACTGGTGCGTAAGATTTA 59.483 40.000 0.00 0.00 43.02 1.40
2829 8549 7.846107 GTGCGTAAGATTTATGTAGATGTGTTG 59.154 37.037 0.00 0.00 43.02 3.33
2865 8585 6.540189 GCATTGCTCTTTTTGATCTACTCCTA 59.460 38.462 0.16 0.00 0.00 2.94
2910 8656 7.678947 ATGAGAGTACCTTCATTTGTCTTTG 57.321 36.000 4.35 0.00 0.00 2.77
2911 8657 5.997746 TGAGAGTACCTTCATTTGTCTTTGG 59.002 40.000 0.00 0.00 0.00 3.28
2936 8682 4.341235 CCAGTATGAACCACTCGGATAGAA 59.659 45.833 0.00 0.00 39.69 2.10
2950 8696 7.546667 CACTCGGATAGAACTAGGTACTCTATC 59.453 44.444 15.71 15.71 43.75 2.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.535780 CTTGTGCAGCTTCAGTGGGA 60.536 55.000 0.00 0.00 0.00 4.37
4 5 0.820891 ACTTGTGCAGCTTCAGTGGG 60.821 55.000 0.00 0.00 0.00 4.61
5 6 1.027357 AACTTGTGCAGCTTCAGTGG 58.973 50.000 0.00 0.00 0.00 4.00
6 7 2.855963 CAAAACTTGTGCAGCTTCAGTG 59.144 45.455 0.00 0.00 0.00 3.66
7 8 2.159198 CCAAAACTTGTGCAGCTTCAGT 60.159 45.455 0.00 0.00 0.00 3.41
8 9 2.099592 TCCAAAACTTGTGCAGCTTCAG 59.900 45.455 0.00 0.00 0.00 3.02
9 10 2.098614 TCCAAAACTTGTGCAGCTTCA 58.901 42.857 0.00 0.00 0.00 3.02
10 11 2.099756 AGTCCAAAACTTGTGCAGCTTC 59.900 45.455 0.00 0.00 33.03 3.86
11 12 2.099756 GAGTCCAAAACTTGTGCAGCTT 59.900 45.455 0.00 0.00 38.74 3.74
12 13 1.678101 GAGTCCAAAACTTGTGCAGCT 59.322 47.619 0.00 0.00 38.74 4.24
13 14 1.269257 GGAGTCCAAAACTTGTGCAGC 60.269 52.381 3.60 0.00 38.74 5.25
14 15 1.338020 GGGAGTCCAAAACTTGTGCAG 59.662 52.381 12.30 0.00 38.74 4.41
15 16 1.064017 AGGGAGTCCAAAACTTGTGCA 60.064 47.619 12.30 0.00 38.74 4.57
16 17 1.692411 AGGGAGTCCAAAACTTGTGC 58.308 50.000 12.30 0.00 38.74 4.57
17 18 5.182001 CAGAATAGGGAGTCCAAAACTTGTG 59.818 44.000 12.30 2.22 38.74 3.33
18 19 5.316987 CAGAATAGGGAGTCCAAAACTTGT 58.683 41.667 12.30 0.00 38.74 3.16
19 20 4.702131 CCAGAATAGGGAGTCCAAAACTTG 59.298 45.833 12.30 2.43 38.74 3.16
20 21 4.601857 TCCAGAATAGGGAGTCCAAAACTT 59.398 41.667 12.30 0.00 38.74 2.66
21 22 4.175962 TCCAGAATAGGGAGTCCAAAACT 58.824 43.478 12.30 0.85 42.42 2.66
22 23 4.569719 TCCAGAATAGGGAGTCCAAAAC 57.430 45.455 12.30 0.00 34.83 2.43
23 24 5.796502 AATCCAGAATAGGGAGTCCAAAA 57.203 39.130 12.30 0.00 37.96 2.44
24 25 5.492524 AGAAATCCAGAATAGGGAGTCCAAA 59.507 40.000 12.30 0.00 37.96 3.28
25 26 5.039645 AGAAATCCAGAATAGGGAGTCCAA 58.960 41.667 12.30 0.00 37.96 3.53
26 27 4.410228 CAGAAATCCAGAATAGGGAGTCCA 59.590 45.833 12.30 0.00 37.96 4.02
27 28 4.202409 CCAGAAATCCAGAATAGGGAGTCC 60.202 50.000 0.00 0.00 37.96 3.85
28 29 4.410555 ACCAGAAATCCAGAATAGGGAGTC 59.589 45.833 0.00 0.00 37.96 3.36
29 30 4.375313 ACCAGAAATCCAGAATAGGGAGT 58.625 43.478 0.00 0.00 37.96 3.85
30 31 4.502259 CGACCAGAAATCCAGAATAGGGAG 60.502 50.000 0.00 0.00 37.96 4.30
31 32 3.388024 CGACCAGAAATCCAGAATAGGGA 59.612 47.826 0.00 0.00 39.14 4.20
32 33 3.388024 TCGACCAGAAATCCAGAATAGGG 59.612 47.826 0.00 0.00 0.00 3.53
33 34 4.672587 TCGACCAGAAATCCAGAATAGG 57.327 45.455 0.00 0.00 0.00 2.57
34 35 5.847304 TCATCGACCAGAAATCCAGAATAG 58.153 41.667 0.00 0.00 0.00 1.73
35 36 5.869649 TCATCGACCAGAAATCCAGAATA 57.130 39.130 0.00 0.00 0.00 1.75
36 37 4.760530 TCATCGACCAGAAATCCAGAAT 57.239 40.909 0.00 0.00 0.00 2.40
37 38 4.551702 TTCATCGACCAGAAATCCAGAA 57.448 40.909 0.00 0.00 0.00 3.02
38 39 4.162131 TCATTCATCGACCAGAAATCCAGA 59.838 41.667 0.00 0.00 0.00 3.86
39 40 4.445453 TCATTCATCGACCAGAAATCCAG 58.555 43.478 0.00 0.00 0.00 3.86
40 41 4.486125 TCATTCATCGACCAGAAATCCA 57.514 40.909 0.00 0.00 0.00 3.41
41 42 5.818136 TTTCATTCATCGACCAGAAATCC 57.182 39.130 0.00 0.00 0.00 3.01
42 43 5.684626 GCATTTCATTCATCGACCAGAAATC 59.315 40.000 9.02 3.97 34.52 2.17
43 44 5.450965 GGCATTTCATTCATCGACCAGAAAT 60.451 40.000 0.00 0.00 36.46 2.17
44 45 4.142403 GGCATTTCATTCATCGACCAGAAA 60.142 41.667 0.00 0.00 0.00 2.52
45 46 3.378112 GGCATTTCATTCATCGACCAGAA 59.622 43.478 0.00 0.00 0.00 3.02
46 47 2.945008 GGCATTTCATTCATCGACCAGA 59.055 45.455 0.00 0.00 0.00 3.86
47 48 2.286595 CGGCATTTCATTCATCGACCAG 60.287 50.000 0.00 0.00 0.00 4.00
48 49 1.670295 CGGCATTTCATTCATCGACCA 59.330 47.619 0.00 0.00 0.00 4.02
49 50 1.597937 GCGGCATTTCATTCATCGACC 60.598 52.381 0.00 0.00 0.00 4.79
50 51 1.063912 TGCGGCATTTCATTCATCGAC 59.936 47.619 0.00 0.00 0.00 4.20
51 52 1.377536 TGCGGCATTTCATTCATCGA 58.622 45.000 0.00 0.00 0.00 3.59
52 53 2.191815 TTGCGGCATTTCATTCATCG 57.808 45.000 2.28 0.00 0.00 3.84
53 54 2.220133 GCATTGCGGCATTTCATTCATC 59.780 45.455 2.28 0.00 0.00 2.92
54 55 2.206750 GCATTGCGGCATTTCATTCAT 58.793 42.857 2.28 0.00 0.00 2.57
55 56 1.067071 TGCATTGCGGCATTTCATTCA 60.067 42.857 2.28 0.00 39.25 2.57
56 57 1.642728 TGCATTGCGGCATTTCATTC 58.357 45.000 2.28 0.00 39.25 2.67
57 58 3.836762 TGCATTGCGGCATTTCATT 57.163 42.105 2.28 0.00 39.25 2.57
65 66 0.664761 ATCACAGTATGCATTGCGGC 59.335 50.000 3.54 0.00 42.53 6.53
66 67 2.394545 CATCACAGTATGCATTGCGG 57.605 50.000 3.54 1.88 42.53 5.69
74 75 5.356190 ACCAGAAATTCAGCATCACAGTATG 59.644 40.000 0.00 0.00 46.00 2.39
75 76 5.503927 ACCAGAAATTCAGCATCACAGTAT 58.496 37.500 0.00 0.00 0.00 2.12
76 77 4.910195 ACCAGAAATTCAGCATCACAGTA 58.090 39.130 0.00 0.00 0.00 2.74
77 78 3.759581 ACCAGAAATTCAGCATCACAGT 58.240 40.909 0.00 0.00 0.00 3.55
78 79 4.778534 AACCAGAAATTCAGCATCACAG 57.221 40.909 0.00 0.00 0.00 3.66
79 80 5.125900 CCATAACCAGAAATTCAGCATCACA 59.874 40.000 0.00 0.00 0.00 3.58
80 81 5.126061 ACCATAACCAGAAATTCAGCATCAC 59.874 40.000 0.00 0.00 0.00 3.06
81 82 5.263599 ACCATAACCAGAAATTCAGCATCA 58.736 37.500 0.00 0.00 0.00 3.07
82 83 5.841957 ACCATAACCAGAAATTCAGCATC 57.158 39.130 0.00 0.00 0.00 3.91
83 84 6.610075 AAACCATAACCAGAAATTCAGCAT 57.390 33.333 0.00 0.00 0.00 3.79
84 85 6.222389 CAAAACCATAACCAGAAATTCAGCA 58.778 36.000 0.00 0.00 0.00 4.41
85 86 5.639082 CCAAAACCATAACCAGAAATTCAGC 59.361 40.000 0.00 0.00 0.00 4.26
86 87 6.165577 CCCAAAACCATAACCAGAAATTCAG 58.834 40.000 0.00 0.00 0.00 3.02
87 88 5.604650 ACCCAAAACCATAACCAGAAATTCA 59.395 36.000 0.00 0.00 0.00 2.57
88 89 6.109156 ACCCAAAACCATAACCAGAAATTC 57.891 37.500 0.00 0.00 0.00 2.17
89 90 6.508030 AACCCAAAACCATAACCAGAAATT 57.492 33.333 0.00 0.00 0.00 1.82
90 91 7.013834 TCTAACCCAAAACCATAACCAGAAAT 58.986 34.615 0.00 0.00 0.00 2.17
91 92 6.374588 TCTAACCCAAAACCATAACCAGAAA 58.625 36.000 0.00 0.00 0.00 2.52
92 93 5.954757 TCTAACCCAAAACCATAACCAGAA 58.045 37.500 0.00 0.00 0.00 3.02
93 94 5.311121 TCTCTAACCCAAAACCATAACCAGA 59.689 40.000 0.00 0.00 0.00 3.86
94 95 5.566469 TCTCTAACCCAAAACCATAACCAG 58.434 41.667 0.00 0.00 0.00 4.00
95 96 5.586155 TCTCTAACCCAAAACCATAACCA 57.414 39.130 0.00 0.00 0.00 3.67
96 97 6.717997 TCTTTCTCTAACCCAAAACCATAACC 59.282 38.462 0.00 0.00 0.00 2.85
97 98 7.754851 TCTTTCTCTAACCCAAAACCATAAC 57.245 36.000 0.00 0.00 0.00 1.89
98 99 8.770010 TTTCTTTCTCTAACCCAAAACCATAA 57.230 30.769 0.00 0.00 0.00 1.90
99 100 8.950007 ATTTCTTTCTCTAACCCAAAACCATA 57.050 30.769 0.00 0.00 0.00 2.74
100 101 7.855784 ATTTCTTTCTCTAACCCAAAACCAT 57.144 32.000 0.00 0.00 0.00 3.55
101 102 7.563556 AGAATTTCTTTCTCTAACCCAAAACCA 59.436 33.333 0.00 0.00 40.86 3.67
102 103 7.867909 CAGAATTTCTTTCTCTAACCCAAAACC 59.132 37.037 0.00 0.00 42.98 3.27
103 104 8.414003 ACAGAATTTCTTTCTCTAACCCAAAAC 58.586 33.333 0.00 0.00 42.98 2.43
104 105 8.533569 ACAGAATTTCTTTCTCTAACCCAAAA 57.466 30.769 0.00 0.00 42.98 2.44
105 106 9.635404 TTACAGAATTTCTTTCTCTAACCCAAA 57.365 29.630 0.00 0.00 42.98 3.28
106 107 9.635404 TTTACAGAATTTCTTTCTCTAACCCAA 57.365 29.630 0.00 0.00 42.98 4.12
107 108 9.284968 CTTTACAGAATTTCTTTCTCTAACCCA 57.715 33.333 0.00 0.00 42.98 4.51
108 109 8.731605 CCTTTACAGAATTTCTTTCTCTAACCC 58.268 37.037 0.00 0.00 42.98 4.11
109 110 8.237949 GCCTTTACAGAATTTCTTTCTCTAACC 58.762 37.037 0.00 0.00 42.98 2.85
110 111 9.004717 AGCCTTTACAGAATTTCTTTCTCTAAC 57.995 33.333 0.00 0.00 42.98 2.34
112 113 9.654663 GTAGCCTTTACAGAATTTCTTTCTCTA 57.345 33.333 0.00 0.00 42.98 2.43
113 114 8.157476 TGTAGCCTTTACAGAATTTCTTTCTCT 58.843 33.333 0.00 0.00 42.98 3.10
114 115 8.324163 TGTAGCCTTTACAGAATTTCTTTCTC 57.676 34.615 0.00 0.00 42.98 2.87
115 116 7.939588 ACTGTAGCCTTTACAGAATTTCTTTCT 59.060 33.333 18.28 0.00 45.69 2.52
116 117 8.100508 ACTGTAGCCTTTACAGAATTTCTTTC 57.899 34.615 18.28 0.00 45.69 2.62
117 118 8.465273 AACTGTAGCCTTTACAGAATTTCTTT 57.535 30.769 18.28 0.00 45.69 2.52
118 119 9.220767 CTAACTGTAGCCTTTACAGAATTTCTT 57.779 33.333 18.28 6.22 45.69 2.52
119 120 7.334671 GCTAACTGTAGCCTTTACAGAATTTCT 59.665 37.037 18.28 0.00 46.10 2.52
120 121 7.465173 GCTAACTGTAGCCTTTACAGAATTTC 58.535 38.462 18.28 0.00 46.10 2.17
121 122 7.379098 GCTAACTGTAGCCTTTACAGAATTT 57.621 36.000 18.28 7.36 46.10 1.82
122 123 6.986904 GCTAACTGTAGCCTTTACAGAATT 57.013 37.500 18.28 7.93 46.10 2.17
139 140 1.470979 CGCATCCGGTTACAGCTAACT 60.471 52.381 0.00 0.00 33.83 2.24
140 141 0.928229 CGCATCCGGTTACAGCTAAC 59.072 55.000 0.00 0.00 32.71 2.34
141 142 0.808453 GCGCATCCGGTTACAGCTAA 60.808 55.000 0.30 0.00 34.32 3.09
142 143 1.227147 GCGCATCCGGTTACAGCTA 60.227 57.895 0.30 0.00 34.32 3.32
143 144 1.672854 TAGCGCATCCGGTTACAGCT 61.673 55.000 11.47 15.54 43.57 4.24
144 145 0.808453 TTAGCGCATCCGGTTACAGC 60.808 55.000 11.47 2.24 43.57 4.40
145 146 1.647346 TTTAGCGCATCCGGTTACAG 58.353 50.000 11.47 0.00 43.57 2.74
146 147 1.937223 CATTTAGCGCATCCGGTTACA 59.063 47.619 11.47 0.00 43.57 2.41
147 148 1.333791 GCATTTAGCGCATCCGGTTAC 60.334 52.381 11.47 0.00 43.57 2.50
148 149 0.941542 GCATTTAGCGCATCCGGTTA 59.058 50.000 11.47 0.00 43.57 2.85
149 150 1.727467 GCATTTAGCGCATCCGGTT 59.273 52.632 11.47 0.00 43.57 4.44
159 160 1.664151 GTCCGTGTACCTGCATTTAGC 59.336 52.381 0.00 0.00 45.96 3.09
160 161 1.924524 CGTCCGTGTACCTGCATTTAG 59.075 52.381 0.00 0.00 0.00 1.85
161 162 1.273048 ACGTCCGTGTACCTGCATTTA 59.727 47.619 0.00 0.00 0.00 1.40
162 163 0.034337 ACGTCCGTGTACCTGCATTT 59.966 50.000 0.00 0.00 0.00 2.32
163 164 0.034337 AACGTCCGTGTACCTGCATT 59.966 50.000 0.00 0.00 0.00 3.56
164 165 0.669318 CAACGTCCGTGTACCTGCAT 60.669 55.000 0.00 0.00 0.00 3.96
165 166 1.300311 CAACGTCCGTGTACCTGCA 60.300 57.895 0.00 0.00 0.00 4.41
166 167 2.025418 CCAACGTCCGTGTACCTGC 61.025 63.158 0.00 0.00 0.00 4.85
167 168 2.025418 GCCAACGTCCGTGTACCTG 61.025 63.158 0.00 0.00 0.00 4.00
168 169 2.341176 GCCAACGTCCGTGTACCT 59.659 61.111 0.00 0.00 0.00 3.08
169 170 2.029369 TGCCAACGTCCGTGTACC 59.971 61.111 0.00 0.00 0.00 3.34
170 171 0.039256 TAGTGCCAACGTCCGTGTAC 60.039 55.000 0.00 0.00 0.00 2.90
171 172 0.672889 TTAGTGCCAACGTCCGTGTA 59.327 50.000 0.00 0.00 0.00 2.90
172 173 0.179078 TTTAGTGCCAACGTCCGTGT 60.179 50.000 0.00 0.00 0.00 4.49
173 174 1.153353 ATTTAGTGCCAACGTCCGTG 58.847 50.000 0.00 0.00 0.00 4.94
174 175 1.533731 CAATTTAGTGCCAACGTCCGT 59.466 47.619 0.00 0.00 0.00 4.69
175 176 1.801771 TCAATTTAGTGCCAACGTCCG 59.198 47.619 0.00 0.00 0.00 4.79
176 177 3.500680 TCTTCAATTTAGTGCCAACGTCC 59.499 43.478 0.00 0.00 0.00 4.79
177 178 4.742438 TCTTCAATTTAGTGCCAACGTC 57.258 40.909 0.00 0.00 0.00 4.34
178 179 4.556699 GCTTCTTCAATTTAGTGCCAACGT 60.557 41.667 0.00 0.00 0.00 3.99
179 180 3.914364 GCTTCTTCAATTTAGTGCCAACG 59.086 43.478 0.00 0.00 0.00 4.10
180 181 4.870363 TGCTTCTTCAATTTAGTGCCAAC 58.130 39.130 0.00 0.00 0.00 3.77
181 182 5.528043 TTGCTTCTTCAATTTAGTGCCAA 57.472 34.783 0.00 0.00 0.00 4.52
182 183 5.163468 TGTTTGCTTCTTCAATTTAGTGCCA 60.163 36.000 0.00 0.00 0.00 4.92
183 184 5.288804 TGTTTGCTTCTTCAATTTAGTGCC 58.711 37.500 0.00 0.00 0.00 5.01
184 185 5.403466 CCTGTTTGCTTCTTCAATTTAGTGC 59.597 40.000 0.00 0.00 0.00 4.40
185 186 5.403466 GCCTGTTTGCTTCTTCAATTTAGTG 59.597 40.000 0.00 0.00 0.00 2.74
186 187 5.509670 GGCCTGTTTGCTTCTTCAATTTAGT 60.510 40.000 0.00 0.00 0.00 2.24
187 188 4.925646 GGCCTGTTTGCTTCTTCAATTTAG 59.074 41.667 0.00 0.00 0.00 1.85
188 189 4.588528 AGGCCTGTTTGCTTCTTCAATTTA 59.411 37.500 3.11 0.00 0.00 1.40
189 190 3.389002 AGGCCTGTTTGCTTCTTCAATTT 59.611 39.130 3.11 0.00 0.00 1.82
190 191 2.967887 AGGCCTGTTTGCTTCTTCAATT 59.032 40.909 3.11 0.00 0.00 2.32
191 192 2.601905 AGGCCTGTTTGCTTCTTCAAT 58.398 42.857 3.11 0.00 0.00 2.57
192 193 2.071778 AGGCCTGTTTGCTTCTTCAA 57.928 45.000 3.11 0.00 0.00 2.69
193 194 2.071778 AAGGCCTGTTTGCTTCTTCA 57.928 45.000 5.69 0.00 0.00 3.02
194 195 4.584327 TTTAAGGCCTGTTTGCTTCTTC 57.416 40.909 5.69 0.00 0.00 2.87
195 196 4.405680 ACTTTTAAGGCCTGTTTGCTTCTT 59.594 37.500 5.69 0.00 0.00 2.52
196 197 3.960755 ACTTTTAAGGCCTGTTTGCTTCT 59.039 39.130 5.69 0.00 0.00 2.85
197 198 4.322080 ACTTTTAAGGCCTGTTTGCTTC 57.678 40.909 5.69 0.00 0.00 3.86
198 199 5.137551 TCTACTTTTAAGGCCTGTTTGCTT 58.862 37.500 5.69 0.00 0.00 3.91
199 200 4.725490 TCTACTTTTAAGGCCTGTTTGCT 58.275 39.130 5.69 0.00 0.00 3.91
200 201 5.644977 ATCTACTTTTAAGGCCTGTTTGC 57.355 39.130 5.69 0.00 0.00 3.68
201 202 6.657541 TGGTATCTACTTTTAAGGCCTGTTTG 59.342 38.462 5.69 0.00 0.00 2.93
202 203 6.657966 GTGGTATCTACTTTTAAGGCCTGTTT 59.342 38.462 5.69 0.00 0.00 2.83
203 204 6.012771 AGTGGTATCTACTTTTAAGGCCTGTT 60.013 38.462 5.69 0.00 0.00 3.16
204 205 5.487845 AGTGGTATCTACTTTTAAGGCCTGT 59.512 40.000 5.69 0.87 0.00 4.00
205 206 5.990668 AGTGGTATCTACTTTTAAGGCCTG 58.009 41.667 5.69 0.00 0.00 4.85
206 207 7.932683 ATAGTGGTATCTACTTTTAAGGCCT 57.067 36.000 0.00 0.00 0.00 5.19
207 208 8.645110 TGTATAGTGGTATCTACTTTTAAGGCC 58.355 37.037 0.00 0.00 0.00 5.19
239 240 9.763465 CTTACGTTTTGGTTTCGTGATTATATT 57.237 29.630 0.00 0.00 38.27 1.28
240 241 9.153721 TCTTACGTTTTGGTTTCGTGATTATAT 57.846 29.630 0.00 0.00 38.27 0.86
241 242 8.531622 TCTTACGTTTTGGTTTCGTGATTATA 57.468 30.769 0.00 0.00 38.27 0.98
242 243 7.385752 TCTCTTACGTTTTGGTTTCGTGATTAT 59.614 33.333 0.00 0.00 38.27 1.28
243 244 6.700960 TCTCTTACGTTTTGGTTTCGTGATTA 59.299 34.615 0.00 0.00 38.27 1.75
244 245 5.524646 TCTCTTACGTTTTGGTTTCGTGATT 59.475 36.000 0.00 0.00 38.27 2.57
245 246 5.051816 TCTCTTACGTTTTGGTTTCGTGAT 58.948 37.500 0.00 0.00 38.27 3.06
246 247 4.431809 TCTCTTACGTTTTGGTTTCGTGA 58.568 39.130 0.00 0.00 38.27 4.35
247 248 4.782252 TCTCTTACGTTTTGGTTTCGTG 57.218 40.909 0.00 0.00 38.27 4.35
248 249 4.149396 CGATCTCTTACGTTTTGGTTTCGT 59.851 41.667 0.00 0.00 40.78 3.85
249 250 4.149396 ACGATCTCTTACGTTTTGGTTTCG 59.851 41.667 0.00 0.00 39.75 3.46
250 251 5.389202 GGACGATCTCTTACGTTTTGGTTTC 60.389 44.000 0.00 0.00 42.74 2.78
251 252 4.450080 GGACGATCTCTTACGTTTTGGTTT 59.550 41.667 0.00 0.00 42.74 3.27
252 253 3.992427 GGACGATCTCTTACGTTTTGGTT 59.008 43.478 0.00 0.00 42.74 3.67
253 254 3.006110 TGGACGATCTCTTACGTTTTGGT 59.994 43.478 0.00 0.00 42.74 3.67
254 255 3.581755 TGGACGATCTCTTACGTTTTGG 58.418 45.455 0.00 0.00 42.74 3.28
255 256 4.862574 TCATGGACGATCTCTTACGTTTTG 59.137 41.667 0.00 0.00 42.74 2.44
256 257 5.068234 TCATGGACGATCTCTTACGTTTT 57.932 39.130 0.00 0.00 42.74 2.43
257 258 4.713824 TCATGGACGATCTCTTACGTTT 57.286 40.909 0.00 0.00 42.74 3.60
258 259 4.920640 ATCATGGACGATCTCTTACGTT 57.079 40.909 0.00 0.00 42.74 3.99
259 260 4.920640 AATCATGGACGATCTCTTACGT 57.079 40.909 0.00 0.00 45.32 3.57
260 261 5.043903 ACAAATCATGGACGATCTCTTACG 58.956 41.667 0.00 0.00 0.00 3.18
261 262 7.116948 CCATACAAATCATGGACGATCTCTTAC 59.883 40.741 0.00 0.00 44.95 2.34
262 263 7.154656 CCATACAAATCATGGACGATCTCTTA 58.845 38.462 0.00 0.00 44.95 2.10
263 264 5.994054 CCATACAAATCATGGACGATCTCTT 59.006 40.000 0.00 0.00 44.95 2.85
264 265 5.070981 ACCATACAAATCATGGACGATCTCT 59.929 40.000 8.31 0.00 44.95 3.10
265 266 5.178252 CACCATACAAATCATGGACGATCTC 59.822 44.000 8.31 0.00 44.95 2.75
266 267 5.059161 CACCATACAAATCATGGACGATCT 58.941 41.667 8.31 0.00 44.95 2.75
267 268 4.319766 GCACCATACAAATCATGGACGATC 60.320 45.833 8.31 0.00 44.95 3.69
268 269 3.565482 GCACCATACAAATCATGGACGAT 59.435 43.478 8.31 0.00 44.95 3.73
269 270 2.942376 GCACCATACAAATCATGGACGA 59.058 45.455 8.31 0.00 44.95 4.20
270 271 2.682352 TGCACCATACAAATCATGGACG 59.318 45.455 8.31 0.78 44.95 4.79
271 272 4.717233 TTGCACCATACAAATCATGGAC 57.283 40.909 8.31 1.24 44.95 4.02
272 273 5.187381 ACATTTGCACCATACAAATCATGGA 59.813 36.000 8.31 0.00 43.94 3.41
273 274 5.421277 ACATTTGCACCATACAAATCATGG 58.579 37.500 0.00 0.00 43.94 3.66
274 275 7.259882 ACTACATTTGCACCATACAAATCATG 58.740 34.615 0.00 0.00 43.94 3.07
275 276 7.408756 ACTACATTTGCACCATACAAATCAT 57.591 32.000 0.00 0.00 43.94 2.45
276 277 6.832520 ACTACATTTGCACCATACAAATCA 57.167 33.333 0.00 0.00 43.94 2.57
277 278 9.801873 ATTTACTACATTTGCACCATACAAATC 57.198 29.630 0.00 0.00 43.94 2.17
278 279 9.801873 GATTTACTACATTTGCACCATACAAAT 57.198 29.630 0.00 0.00 46.05 2.32
279 280 8.797438 TGATTTACTACATTTGCACCATACAAA 58.203 29.630 0.00 0.00 40.98 2.83
280 281 8.341892 TGATTTACTACATTTGCACCATACAA 57.658 30.769 0.00 0.00 0.00 2.41
281 282 7.826744 TCTGATTTACTACATTTGCACCATACA 59.173 33.333 0.00 0.00 0.00 2.29
282 283 8.208718 TCTGATTTACTACATTTGCACCATAC 57.791 34.615 0.00 0.00 0.00 2.39
283 284 8.673711 GTTCTGATTTACTACATTTGCACCATA 58.326 33.333 0.00 0.00 0.00 2.74
284 285 7.362920 GGTTCTGATTTACTACATTTGCACCAT 60.363 37.037 0.00 0.00 0.00 3.55
285 286 6.072175 GGTTCTGATTTACTACATTTGCACCA 60.072 38.462 0.00 0.00 0.00 4.17
286 287 6.151144 AGGTTCTGATTTACTACATTTGCACC 59.849 38.462 0.00 0.00 0.00 5.01
287 288 7.023575 CAGGTTCTGATTTACTACATTTGCAC 58.976 38.462 0.00 0.00 32.44 4.57
288 289 6.150976 CCAGGTTCTGATTTACTACATTTGCA 59.849 38.462 0.00 0.00 32.44 4.08
289 290 6.151144 ACCAGGTTCTGATTTACTACATTTGC 59.849 38.462 0.00 0.00 32.44 3.68
290 291 7.607991 AGACCAGGTTCTGATTTACTACATTTG 59.392 37.037 0.00 0.00 32.44 2.32
291 292 7.690256 AGACCAGGTTCTGATTTACTACATTT 58.310 34.615 0.00 0.00 32.44 2.32
292 293 7.259088 AGACCAGGTTCTGATTTACTACATT 57.741 36.000 0.00 0.00 32.44 2.71
293 294 6.127026 GGAGACCAGGTTCTGATTTACTACAT 60.127 42.308 0.00 0.00 32.44 2.29
294 295 5.187186 GGAGACCAGGTTCTGATTTACTACA 59.813 44.000 0.00 0.00 32.44 2.74
295 296 5.422650 AGGAGACCAGGTTCTGATTTACTAC 59.577 44.000 0.00 0.00 32.44 2.73
296 297 5.590818 AGGAGACCAGGTTCTGATTTACTA 58.409 41.667 0.00 0.00 32.44 1.82
297 298 4.430441 AGGAGACCAGGTTCTGATTTACT 58.570 43.478 0.00 0.00 32.44 2.24
298 299 4.828072 AGGAGACCAGGTTCTGATTTAC 57.172 45.455 0.00 0.00 32.44 2.01
299 300 5.843019 AAAGGAGACCAGGTTCTGATTTA 57.157 39.130 0.00 0.00 32.44 1.40
300 301 4.731313 AAAGGAGACCAGGTTCTGATTT 57.269 40.909 0.00 0.00 32.44 2.17
301 302 4.731313 AAAAGGAGACCAGGTTCTGATT 57.269 40.909 0.00 0.00 32.44 2.57
302 303 4.731313 AAAAAGGAGACCAGGTTCTGAT 57.269 40.909 0.00 0.00 32.44 2.90
320 321 7.984617 ACTAGGCTGAAGCAAATTAAACAAAAA 59.015 29.630 4.43 0.00 44.36 1.94
321 322 7.496747 ACTAGGCTGAAGCAAATTAAACAAAA 58.503 30.769 4.43 0.00 44.36 2.44
322 323 7.049799 ACTAGGCTGAAGCAAATTAAACAAA 57.950 32.000 4.43 0.00 44.36 2.83
323 324 6.648879 ACTAGGCTGAAGCAAATTAAACAA 57.351 33.333 4.43 0.00 44.36 2.83
324 325 7.753309 TTACTAGGCTGAAGCAAATTAAACA 57.247 32.000 4.43 0.00 44.36 2.83
325 326 8.678199 AGATTACTAGGCTGAAGCAAATTAAAC 58.322 33.333 4.43 0.00 44.36 2.01
326 327 8.807948 AGATTACTAGGCTGAAGCAAATTAAA 57.192 30.769 4.43 0.00 44.36 1.52
327 328 8.267894 AGAGATTACTAGGCTGAAGCAAATTAA 58.732 33.333 4.43 0.00 44.36 1.40
328 329 7.796054 AGAGATTACTAGGCTGAAGCAAATTA 58.204 34.615 4.43 0.00 44.36 1.40
329 330 6.657875 AGAGATTACTAGGCTGAAGCAAATT 58.342 36.000 4.43 0.00 44.36 1.82
330 331 6.245890 AGAGATTACTAGGCTGAAGCAAAT 57.754 37.500 4.43 0.00 44.36 2.32
331 332 5.395768 GGAGAGATTACTAGGCTGAAGCAAA 60.396 44.000 4.43 0.00 44.36 3.68
332 333 4.100189 GGAGAGATTACTAGGCTGAAGCAA 59.900 45.833 4.43 0.00 44.36 3.91
333 334 3.639094 GGAGAGATTACTAGGCTGAAGCA 59.361 47.826 4.43 0.00 44.36 3.91
334 335 3.895041 AGGAGAGATTACTAGGCTGAAGC 59.105 47.826 0.00 0.00 41.14 3.86
335 336 4.522789 GGAGGAGAGATTACTAGGCTGAAG 59.477 50.000 0.00 0.00 0.00 3.02
336 337 4.079154 TGGAGGAGAGATTACTAGGCTGAA 60.079 45.833 0.00 0.00 0.00 3.02
337 338 3.463704 TGGAGGAGAGATTACTAGGCTGA 59.536 47.826 0.00 0.00 0.00 4.26
338 339 3.572255 GTGGAGGAGAGATTACTAGGCTG 59.428 52.174 0.00 0.00 0.00 4.85
339 340 3.749310 CGTGGAGGAGAGATTACTAGGCT 60.749 52.174 0.00 0.00 0.00 4.58
340 341 2.554893 CGTGGAGGAGAGATTACTAGGC 59.445 54.545 0.00 0.00 0.00 3.93
341 342 3.150767 CCGTGGAGGAGAGATTACTAGG 58.849 54.545 0.00 0.00 45.00 3.02
342 343 3.822940 ACCGTGGAGGAGAGATTACTAG 58.177 50.000 0.00 0.00 45.00 2.57
343 344 3.947612 ACCGTGGAGGAGAGATTACTA 57.052 47.619 0.00 0.00 45.00 1.82
344 345 2.761208 CAACCGTGGAGGAGAGATTACT 59.239 50.000 0.00 0.00 45.00 2.24
345 346 2.738964 GCAACCGTGGAGGAGAGATTAC 60.739 54.545 0.00 0.00 45.00 1.89
346 347 1.480954 GCAACCGTGGAGGAGAGATTA 59.519 52.381 0.00 0.00 45.00 1.75
347 348 0.250513 GCAACCGTGGAGGAGAGATT 59.749 55.000 0.00 0.00 45.00 2.40
348 349 0.904865 TGCAACCGTGGAGGAGAGAT 60.905 55.000 0.00 0.00 45.00 2.75
349 350 1.533033 TGCAACCGTGGAGGAGAGA 60.533 57.895 0.00 0.00 45.00 3.10
350 351 1.079543 CTGCAACCGTGGAGGAGAG 60.080 63.158 0.00 0.00 45.00 3.20
351 352 3.059982 CTGCAACCGTGGAGGAGA 58.940 61.111 0.00 0.00 45.00 3.71
352 353 2.743928 GCTGCAACCGTGGAGGAG 60.744 66.667 0.00 0.00 43.14 3.69
353 354 4.329545 GGCTGCAACCGTGGAGGA 62.330 66.667 0.50 0.00 43.14 3.71
354 355 3.925630 ATGGCTGCAACCGTGGAGG 62.926 63.158 0.00 0.00 43.14 4.30
355 356 2.360350 ATGGCTGCAACCGTGGAG 60.360 61.111 0.00 0.00 45.57 3.86
356 357 2.672651 CATGGCTGCAACCGTGGA 60.673 61.111 18.94 0.00 42.13 4.02
359 360 2.203337 ACACATGGCTGCAACCGT 60.203 55.556 0.85 0.00 0.00 4.83
360 361 1.968017 AGACACATGGCTGCAACCG 60.968 57.895 0.85 0.00 27.68 4.44
361 362 1.582968 CAGACACATGGCTGCAACC 59.417 57.895 0.80 0.00 45.26 3.77
367 368 4.052518 GGGGGCAGACACATGGCT 62.053 66.667 0.00 0.00 44.71 4.75
381 382 1.953100 ATCATTGCTTGGGGAGGGGG 61.953 60.000 0.00 0.00 0.00 5.40
382 383 0.757935 CATCATTGCTTGGGGAGGGG 60.758 60.000 0.00 0.00 0.00 4.79
383 384 0.032813 ACATCATTGCTTGGGGAGGG 60.033 55.000 0.00 0.00 0.00 4.30
384 385 1.108776 CACATCATTGCTTGGGGAGG 58.891 55.000 0.00 0.00 0.00 4.30
385 386 2.133281 TCACATCATTGCTTGGGGAG 57.867 50.000 0.00 0.00 0.00 4.30
386 387 2.041485 TCTTCACATCATTGCTTGGGGA 59.959 45.455 0.00 0.00 0.00 4.81
426 427 6.779539 TCCATATATTCAGACAGCTTCAGAGA 59.220 38.462 0.00 0.00 0.00 3.10
444 445 9.391006 GGTGTCATTCTTTTTACTGTCCATATA 57.609 33.333 0.00 0.00 0.00 0.86
445 446 8.109634 AGGTGTCATTCTTTTTACTGTCCATAT 58.890 33.333 0.00 0.00 0.00 1.78
446 447 7.390440 CAGGTGTCATTCTTTTTACTGTCCATA 59.610 37.037 0.00 0.00 0.00 2.74
480 481 7.461182 TCTTTCTTCTTTTTCACTGTTGGAA 57.539 32.000 0.00 0.00 0.00 3.53
552 558 2.861462 TCAAGTTTTTCCCTTGCACG 57.139 45.000 0.00 0.00 39.30 5.34
596 602 1.223187 GCTCGACAGAAAAACCCGAA 58.777 50.000 0.00 0.00 0.00 4.30
597 603 0.105224 TGCTCGACAGAAAAACCCGA 59.895 50.000 0.00 0.00 0.00 5.14
600 606 0.234884 CCGTGCTCGACAGAAAAACC 59.765 55.000 10.21 0.00 39.71 3.27
608 614 4.373116 GGCCTTCCGTGCTCGACA 62.373 66.667 10.21 0.00 39.71 4.35
643 657 4.593864 GCCCGATCGAGGAGGTGC 62.594 72.222 18.66 3.59 0.00 5.01
701 718 1.509162 GAACATTCGCACGCGTTCC 60.509 57.895 10.22 2.09 40.74 3.62
702 719 0.110823 AAGAACATTCGCACGCGTTC 60.111 50.000 10.22 2.86 40.74 3.95
703 720 0.110823 GAAGAACATTCGCACGCGTT 60.111 50.000 10.22 0.00 40.74 4.84
704 721 1.491563 GAAGAACATTCGCACGCGT 59.508 52.632 5.58 5.58 40.74 6.01
705 722 1.225745 GGAAGAACATTCGCACGCG 60.226 57.895 3.53 3.53 41.35 6.01
706 723 0.447801 ATGGAAGAACATTCGCACGC 59.552 50.000 0.00 0.00 0.00 5.34
707 724 2.002586 AGATGGAAGAACATTCGCACG 58.997 47.619 0.00 0.00 0.00 5.34
708 725 3.002791 TCAGATGGAAGAACATTCGCAC 58.997 45.455 0.00 0.00 0.00 5.34
709 726 3.333029 TCAGATGGAAGAACATTCGCA 57.667 42.857 0.00 0.00 0.00 5.10
710 727 4.685169 TTTCAGATGGAAGAACATTCGC 57.315 40.909 0.00 0.00 36.72 4.70
711 728 5.032863 GCATTTCAGATGGAAGAACATTCG 58.967 41.667 0.00 0.00 36.72 3.34
841 866 3.758931 GGGGTTTGATGGGCACGC 61.759 66.667 0.00 0.00 0.00 5.34
849 874 1.203758 GAAAATTCGCCGGGGTTTGAT 59.796 47.619 19.13 6.07 0.00 2.57
850 875 0.599060 GAAAATTCGCCGGGGTTTGA 59.401 50.000 19.13 3.88 0.00 2.69
874 899 2.019984 GCCTTGACATCACAGATTCCC 58.980 52.381 0.00 0.00 0.00 3.97
898 923 1.957186 GTAGTTGCCACGCACCGAA 60.957 57.895 0.00 0.00 38.71 4.30
978 1019 3.547746 TGCTGAATGCTGATAGATGCAA 58.452 40.909 0.00 0.00 42.74 4.08
987 1031 0.815095 CTGCCATTGCTGAATGCTGA 59.185 50.000 0.00 0.00 43.37 4.26
990 1034 1.876714 CGCTGCCATTGCTGAATGC 60.877 57.895 0.00 0.00 38.14 3.56
992 1036 0.666913 GATCGCTGCCATTGCTGAAT 59.333 50.000 0.00 0.00 38.61 2.57
993 1037 1.708193 CGATCGCTGCCATTGCTGAA 61.708 55.000 0.26 0.00 38.61 3.02
1102 1173 9.155975 GTTAAGTCTTAACACATGACATGAGAT 57.844 33.333 24.47 11.27 43.79 2.75
1264 1582 0.168788 GTGGCACGCACGTACTACTA 59.831 55.000 0.00 0.00 39.55 1.82
1424 2663 2.420022 ACAAGTGCAAGAACACACAGAC 59.580 45.455 0.00 0.00 43.23 3.51
1425 2664 2.419673 CACAAGTGCAAGAACACACAGA 59.580 45.455 0.00 0.00 43.23 3.41
1558 5380 7.335627 TCCATCCATTCTAAAATAAGTGTCGT 58.664 34.615 0.00 0.00 0.00 4.34
1714 5606 1.608717 CCTTGACTACCGCCAGAGCT 61.609 60.000 0.00 0.00 36.60 4.09
1715 5607 1.153549 CCTTGACTACCGCCAGAGC 60.154 63.158 0.00 0.00 0.00 4.09
1716 5608 1.115467 ATCCTTGACTACCGCCAGAG 58.885 55.000 0.00 0.00 0.00 3.35
1919 5811 1.818363 CGTCGTCGAGGATGGAGGA 60.818 63.158 17.58 0.00 35.40 3.71
1942 5834 2.916052 GCTGGACTGGTCGTCGTCA 61.916 63.158 0.00 0.00 43.79 4.35
1945 5837 3.948086 GACGCTGGACTGGTCGTCG 62.948 68.421 0.00 0.00 43.79 5.12
1962 5854 1.122227 TCAGATCATGATGCCACCGA 58.878 50.000 14.30 0.00 31.12 4.69
1974 5866 0.832626 ATGGCGGTGTGATCAGATCA 59.167 50.000 9.21 9.21 36.84 2.92
2012 5904 2.747460 GCCTTCACGCATGAGGCA 60.747 61.111 15.60 0.00 43.31 4.75
2027 5919 3.938963 TCGATGGTAAATCACTCAAAGCC 59.061 43.478 0.00 0.00 0.00 4.35
2034 5926 6.479972 TTCATAGGTCGATGGTAAATCACT 57.520 37.500 0.00 0.00 0.00 3.41
2095 5992 9.594936 GGCATCATAGTATTCCTATAGTCCTAT 57.405 37.037 0.00 0.00 34.49 2.57
2096 5993 8.566109 TGGCATCATAGTATTCCTATAGTCCTA 58.434 37.037 0.00 0.00 34.49 2.94
2097 5994 7.422512 TGGCATCATAGTATTCCTATAGTCCT 58.577 38.462 0.00 0.00 34.49 3.85
2098 5995 7.661536 TGGCATCATAGTATTCCTATAGTCC 57.338 40.000 0.00 0.00 34.49 3.85
2099 5996 9.539825 CATTGGCATCATAGTATTCCTATAGTC 57.460 37.037 0.00 0.00 34.49 2.59
2100 5997 9.051259 ACATTGGCATCATAGTATTCCTATAGT 57.949 33.333 0.00 0.00 34.49 2.12
2101 5998 9.896645 AACATTGGCATCATAGTATTCCTATAG 57.103 33.333 0.00 0.00 34.49 1.31
2202 6320 8.293867 AGACGATAGATTAATACAGCTGAACTC 58.706 37.037 23.35 7.92 41.38 3.01
2251 7168 9.288576 ACAACTTAAACTAGTTATTACAACCCC 57.711 33.333 8.92 0.00 36.24 4.95
2289 7206 9.715119 ACAGGGCTACTATATATAATGATGTGA 57.285 33.333 0.00 0.00 0.00 3.58
2290 7207 9.973450 GACAGGGCTACTATATATAATGATGTG 57.027 37.037 0.00 0.00 0.00 3.21
2291 7208 9.715119 TGACAGGGCTACTATATATAATGATGT 57.285 33.333 0.00 0.00 0.00 3.06
2292 7209 9.973450 GTGACAGGGCTACTATATATAATGATG 57.027 37.037 0.00 0.00 0.00 3.07
2293 7210 9.944079 AGTGACAGGGCTACTATATATAATGAT 57.056 33.333 0.00 0.00 0.00 2.45
2299 7216 8.951614 TTGTTAGTGACAGGGCTACTATATAT 57.048 34.615 0.00 0.00 39.94 0.86
2300 7217 7.450634 CCTTGTTAGTGACAGGGCTACTATATA 59.549 40.741 3.13 0.00 46.88 0.86
2301 7218 6.267928 CCTTGTTAGTGACAGGGCTACTATAT 59.732 42.308 3.13 0.00 46.88 0.86
2306 7223 2.973945 CCTTGTTAGTGACAGGGCTAC 58.026 52.381 3.13 0.00 46.88 3.58
2342 7259 0.821711 CGCCCCTTTGTTGTCCAAGA 60.822 55.000 0.00 0.00 33.75 3.02
2373 7291 0.747255 ATGCGACCTACGAGATTGCT 59.253 50.000 0.00 0.00 45.77 3.91
2378 7296 1.753078 AGCCATGCGACCTACGAGA 60.753 57.895 0.00 0.00 45.77 4.04
2389 7349 1.227205 CTCTCGACCTCAGCCATGC 60.227 63.158 0.00 0.00 0.00 4.06
2417 7397 2.027561 CGTTTCAAGTATGGGGTGAGGA 60.028 50.000 0.00 0.00 0.00 3.71
2428 7408 3.562141 CACAACCATGGTCGTTTCAAGTA 59.438 43.478 20.07 0.00 0.00 2.24
2437 7417 2.412716 CGTTTCATCACAACCATGGTCG 60.413 50.000 20.07 10.26 0.00 4.79
2444 7427 1.873591 ACAGAGCGTTTCATCACAACC 59.126 47.619 0.00 0.00 0.00 3.77
2462 7445 3.264193 ACCTGCTCAATATCACCTGAACA 59.736 43.478 0.00 0.00 0.00 3.18
2482 7499 3.071747 AGAAAGAGACCAAGGTTCAGACC 59.928 47.826 0.00 0.00 46.92 3.85
2517 7537 4.515567 ACAGCTAGCAACTACCTTCAAAAC 59.484 41.667 18.83 0.00 0.00 2.43
2537 7557 3.229276 CAGTTCAGAGTGGAGCTACAG 57.771 52.381 0.00 0.00 0.00 2.74
2555 7575 0.545309 TCAGACTTCCCCCAGTCCAG 60.545 60.000 0.00 0.00 43.89 3.86
2588 8206 1.045911 AGAGAGGAATGGCGGAGGTC 61.046 60.000 0.00 0.00 0.00 3.85
2689 8315 9.764363 ATACGTAAGAATAGCATTTCTGAATCA 57.236 29.630 0.00 0.00 43.62 2.57
2742 8370 3.381335 TGGGTGGTTACTATCCCTCTTC 58.619 50.000 0.00 0.00 40.48 2.87
2763 8395 3.954258 GGTTATTGCCATGTTTAGCTCCT 59.046 43.478 0.00 0.00 0.00 3.69
2771 8403 3.181501 CGAATGACGGTTATTGCCATGTT 60.182 43.478 2.58 0.00 38.46 2.71
2829 8549 7.276218 TCAAAAAGAGCAATGCTATGTTTATGC 59.724 33.333 16.51 0.00 35.47 3.14
2836 8556 7.928103 AGTAGATCAAAAAGAGCAATGCTATG 58.072 34.615 8.12 3.02 39.88 2.23
2865 8585 8.869109 TCTCATTTCTTCAACACCCAAATTTAT 58.131 29.630 0.00 0.00 0.00 1.40
2889 8635 5.998363 GTCCAAAGACAAATGAAGGTACTCT 59.002 40.000 0.00 0.00 42.99 3.24
2910 8656 1.134788 CCGAGTGGTTCATACTGGTCC 60.135 57.143 0.00 0.00 0.00 4.46
2911 8657 1.822990 TCCGAGTGGTTCATACTGGTC 59.177 52.381 0.00 0.00 36.30 4.02



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.