Multiple sequence alignment - TraesCS1D01G326500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G326500 chr1D 100.000 2963 0 0 1 2963 419072121 419069159 0.000000e+00 5472.0
1 TraesCS1D01G326500 chr1D 91.011 356 27 4 254 607 296736156 296736508 2.670000e-130 475.0
2 TraesCS1D01G326500 chr1D 92.814 167 11 1 2660 2825 338937212 338937378 1.060000e-59 241.0
3 TraesCS1D01G326500 chr1D 89.412 85 3 3 1999 2078 277349084 277349167 5.220000e-18 102.0
4 TraesCS1D01G326500 chr1D 87.097 93 5 4 1991 2077 137066613 137066522 6.760000e-17 99.0
5 TraesCS1D01G326500 chr1D 88.372 86 4 3 1994 2074 483383018 483382934 6.760000e-17 99.0
6 TraesCS1D01G326500 chr1D 85.714 63 4 1 2012 2074 408924551 408924494 8.870000e-06 62.1
7 TraesCS1D01G326500 chr1A 94.361 993 44 6 1013 1993 516164694 516163702 0.000000e+00 1513.0
8 TraesCS1D01G326500 chr1A 87.385 650 43 10 2073 2683 516163702 516163053 0.000000e+00 710.0
9 TraesCS1D01G326500 chr1A 88.743 382 35 5 647 1021 516165112 516164732 7.480000e-126 460.0
10 TraesCS1D01G326500 chr1A 89.726 292 18 3 2665 2947 516160290 516160002 2.170000e-96 363.0
11 TraesCS1D01G326500 chr1A 89.362 235 20 3 755 985 421800372 421800605 1.040000e-74 291.0
12 TraesCS1D01G326500 chr1A 93.293 164 10 1 2659 2821 566481170 566481007 1.060000e-59 241.0
13 TraesCS1D01G326500 chr1A 87.356 87 5 3 1994 2075 339332819 339332904 8.740000e-16 95.3
14 TraesCS1D01G326500 chr1A 87.143 70 4 2 2010 2074 26987460 26987529 1.140000e-09 75.0
15 TraesCS1D01G326500 chr7D 84.598 870 115 13 1083 1950 18929408 18928556 0.000000e+00 846.0
16 TraesCS1D01G326500 chr7D 83.667 900 139 5 1071 1969 18948080 18947188 0.000000e+00 841.0
17 TraesCS1D01G326500 chr7D 88.796 357 36 4 254 607 611009513 611009158 4.540000e-118 435.0
18 TraesCS1D01G326500 chr7D 89.003 291 27 4 254 541 578492945 578493233 3.630000e-94 355.0
19 TraesCS1D01G326500 chr7D 84.962 266 23 6 255 517 31047820 31048071 1.360000e-63 254.0
20 TraesCS1D01G326500 chr7D 82.562 281 44 4 1716 1995 20494198 20493922 2.950000e-60 243.0
21 TraesCS1D01G326500 chr7D 100.000 33 0 0 2439 2471 377026714 377026682 8.870000e-06 62.1
22 TraesCS1D01G326500 chr7D 86.538 52 2 3 2439 2485 610541651 610541600 5.000000e-03 52.8
23 TraesCS1D01G326500 chr7A 83.630 898 128 13 1055 1950 19421643 19420763 0.000000e+00 826.0
24 TraesCS1D01G326500 chr7A 81.781 741 115 12 1071 1809 19505270 19504548 1.170000e-168 603.0
25 TraesCS1D01G326500 chr7A 89.488 371 35 4 237 605 556100950 556101318 1.610000e-127 466.0
26 TraesCS1D01G326500 chr7A 89.488 371 35 4 237 605 556101549 556101917 1.610000e-127 466.0
27 TraesCS1D01G326500 chr7A 90.213 235 18 3 755 985 151360061 151360294 4.800000e-78 302.0
28 TraesCS1D01G326500 chr7A 83.832 167 25 2 1804 1969 19443349 19443184 1.100000e-34 158.0
29 TraesCS1D01G326500 chr7A 86.364 132 12 3 442 573 641229564 641229689 3.980000e-29 139.0
30 TraesCS1D01G326500 chr4A 81.983 938 141 19 1055 1987 713834556 713833642 0.000000e+00 771.0
31 TraesCS1D01G326500 chr4A 89.787 235 19 3 755 985 651119058 651118825 2.230000e-76 296.0
32 TraesCS1D01G326500 chr4A 74.752 202 48 3 1265 1464 715813401 715813601 1.460000e-13 87.9
33 TraesCS1D01G326500 chr4A 100.000 33 0 0 2439 2471 173926654 173926686 8.870000e-06 62.1
34 TraesCS1D01G326500 chr4D 89.888 356 31 4 253 607 334964738 334964387 1.250000e-123 453.0
35 TraesCS1D01G326500 chr4D 90.110 182 16 2 2660 2840 3590635 3590455 4.940000e-58 235.0
36 TraesCS1D01G326500 chr4D 86.047 86 5 4 1994 2074 16652516 16652433 5.260000e-13 86.1
37 TraesCS1D01G326500 chr4D 97.872 47 1 0 603 649 334964362 334964316 6.810000e-12 82.4
38 TraesCS1D01G326500 chr4D 100.000 36 0 0 2039 2074 497218386 497218421 1.910000e-07 67.6
39 TraesCS1D01G326500 chr4D 90.196 51 4 1 1986 2035 427028006 427028056 6.860000e-07 65.8
40 TraesCS1D01G326500 chr4D 100.000 33 0 0 2439 2471 389518838 389518870 8.870000e-06 62.1
41 TraesCS1D01G326500 chr5D 89.415 359 32 6 253 607 341239918 341240274 5.830000e-122 448.0
42 TraesCS1D01G326500 chr5D 93.293 164 10 1 2660 2822 230416992 230416829 1.060000e-59 241.0
43 TraesCS1D01G326500 chr5D 92.105 152 11 1 835 985 526730118 526730269 2.310000e-51 213.0
44 TraesCS1D01G326500 chr5D 100.000 45 0 0 603 647 341240299 341240343 1.890000e-12 84.2
45 TraesCS1D01G326500 chr5D 83.516 91 9 3 1994 2079 267821428 267821517 2.450000e-11 80.5
46 TraesCS1D01G326500 chr7B 89.356 357 31 6 254 607 60457679 60458031 2.710000e-120 442.0
47 TraesCS1D01G326500 chr7B 90.638 235 17 3 755 985 634854371 634854604 1.030000e-79 307.0
48 TraesCS1D01G326500 chr7B 86.528 193 18 5 2469 2661 388807769 388807953 3.870000e-49 206.0
49 TraesCS1D01G326500 chr7B 86.528 193 18 5 2469 2661 388814146 388814330 3.870000e-49 206.0
50 TraesCS1D01G326500 chr7B 86.528 193 18 5 2469 2661 388842283 388842467 3.870000e-49 206.0
51 TraesCS1D01G326500 chr7B 86.528 193 18 5 2469 2661 388870805 388870989 3.870000e-49 206.0
52 TraesCS1D01G326500 chr7B 86.010 193 19 5 2469 2661 388856210 388856394 1.800000e-47 200.0
53 TraesCS1D01G326500 chr4B 88.796 357 35 5 254 607 122566123 122566477 1.630000e-117 433.0
54 TraesCS1D01G326500 chr4B 88.333 60 6 1 588 647 122566491 122566549 1.470000e-08 71.3
55 TraesCS1D01G326500 chr2B 88.732 355 34 6 257 607 207740072 207739720 2.110000e-116 429.0
56 TraesCS1D01G326500 chr5B 86.047 301 37 3 256 556 69129156 69128861 4.770000e-83 318.0
57 TraesCS1D01G326500 chr5B 92.715 151 10 1 835 984 4883613 4883763 1.790000e-52 217.0
58 TraesCS1D01G326500 chr5B 88.060 67 4 3 582 648 491577950 491577888 3.170000e-10 76.8
59 TraesCS1D01G326500 chr3A 90.598 234 17 3 755 984 532009941 532010173 3.710000e-79 305.0
60 TraesCS1D01G326500 chr5A 90.213 235 18 3 755 985 13517933 13518166 4.800000e-78 302.0
61 TraesCS1D01G326500 chr5A 86.022 93 7 3 1994 2081 621176908 621176817 8.740000e-16 95.3
62 TraesCS1D01G326500 chr6B 89.787 235 19 3 755 985 296976486 296976253 2.230000e-76 296.0
63 TraesCS1D01G326500 chr6B 90.909 176 14 2 2660 2833 583051201 583051376 4.940000e-58 235.0
64 TraesCS1D01G326500 chr6B 93.289 149 9 1 838 985 78506499 78506351 4.970000e-53 219.0
65 TraesCS1D01G326500 chr6B 91.946 149 11 1 838 985 90746604 90746456 1.080000e-49 207.0
66 TraesCS1D01G326500 chr2A 89.362 235 20 3 755 985 664865810 664866043 1.040000e-74 291.0
67 TraesCS1D01G326500 chr2A 87.097 93 6 4 1991 2078 193549945 193550036 1.880000e-17 100.0
68 TraesCS1D01G326500 chr2A 86.792 53 5 2 2439 2489 53997032 53996980 1.150000e-04 58.4
69 TraesCS1D01G326500 chr1B 93.293 164 10 1 2659 2821 623195845 623195682 1.060000e-59 241.0
70 TraesCS1D01G326500 chr1B 93.827 81 4 1 1994 2074 303240454 303240375 1.440000e-23 121.0
71 TraesCS1D01G326500 chr1B 97.059 68 1 1 2007 2074 304388846 304388780 2.410000e-21 113.0
72 TraesCS1D01G326500 chr1B 88.235 51 2 3 2439 2485 445662759 445662809 1.150000e-04 58.4
73 TraesCS1D01G326500 chr6D 92.308 169 12 1 2660 2827 15517088 15516920 3.820000e-59 239.0
74 TraesCS1D01G326500 chr6D 89.157 83 5 2 1994 2073 144858087 144858168 1.880000e-17 100.0
75 TraesCS1D01G326500 chr6D 83.146 89 4 5 1994 2074 14974205 14974290 1.470000e-08 71.3
76 TraesCS1D01G326500 chr6D 93.023 43 3 0 1994 2036 405676653 405676695 2.470000e-06 63.9
77 TraesCS1D01G326500 chr6D 100.000 33 0 0 2439 2471 82667822 82667854 8.870000e-06 62.1
78 TraesCS1D01G326500 chr2D 91.329 173 14 1 2659 2830 352947997 352947825 4.940000e-58 235.0
79 TraesCS1D01G326500 chr2D 90.698 86 2 3 1994 2074 29166517 29166601 3.120000e-20 110.0
80 TraesCS1D01G326500 chr2D 88.372 86 4 2 1994 2074 25267461 25267377 6.760000e-17 99.0
81 TraesCS1D01G326500 chr3D 87.245 196 20 5 2467 2661 7179144 7178953 4.970000e-53 219.0
82 TraesCS1D01G326500 chr3D 86.154 195 20 5 2467 2661 36243849 36244036 1.390000e-48 204.0
83 TraesCS1D01G326500 chr3D 86.667 90 7 2 1991 2075 388801625 388801714 8.740000e-16 95.3
84 TraesCS1D01G326500 chr3D 85.556 90 5 5 1991 2074 5040771 5040684 1.460000e-13 87.9
85 TraesCS1D01G326500 chr3D 100.000 33 0 0 2439 2471 492616034 492616066 8.870000e-06 62.1
86 TraesCS1D01G326500 chrUn 86.528 193 18 5 2469 2661 400000415 400000231 3.870000e-49 206.0
87 TraesCS1D01G326500 chrUn 88.372 86 4 2 1994 2074 24874000 24873916 6.760000e-17 99.0
88 TraesCS1D01G326500 chrUn 86.047 86 6 2 1994 2074 110669532 110669448 1.460000e-13 87.9
89 TraesCS1D01G326500 chrUn 88.235 68 3 1 2012 2074 88992586 88992653 3.170000e-10 76.8
90 TraesCS1D01G326500 chrUn 91.667 48 3 1 1991 2038 253929078 253929124 6.860000e-07 65.8
91 TraesCS1D01G326500 chrUn 91.111 45 3 1 1994 2038 86974734 86974691 3.190000e-05 60.2
92 TraesCS1D01G326500 chrUn 89.130 46 4 1 1994 2039 88050388 88050344 4.130000e-04 56.5
93 TraesCS1D01G326500 chr6A 89.062 64 6 1 592 655 13964862 13964800 8.810000e-11 78.7
94 TraesCS1D01G326500 chr6A 75.155 161 38 2 1306 1465 613944339 613944498 1.140000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G326500 chr1D 419069159 419072121 2962 True 5472.0 5472 100.00000 1 2963 1 chr1D.!!$R3 2962
1 TraesCS1D01G326500 chr1A 516160002 516165112 5110 True 761.5 1513 90.05375 647 2947 4 chr1A.!!$R2 2300
2 TraesCS1D01G326500 chr7D 18928556 18929408 852 True 846.0 846 84.59800 1083 1950 1 chr7D.!!$R1 867
3 TraesCS1D01G326500 chr7D 18947188 18948080 892 True 841.0 841 83.66700 1071 1969 1 chr7D.!!$R2 898
4 TraesCS1D01G326500 chr7A 19420763 19421643 880 True 826.0 826 83.63000 1055 1950 1 chr7A.!!$R1 895
5 TraesCS1D01G326500 chr7A 19504548 19505270 722 True 603.0 603 81.78100 1071 1809 1 chr7A.!!$R3 738
6 TraesCS1D01G326500 chr7A 556100950 556101917 967 False 466.0 466 89.48800 237 605 2 chr7A.!!$F3 368
7 TraesCS1D01G326500 chr4A 713833642 713834556 914 True 771.0 771 81.98300 1055 1987 1 chr4A.!!$R2 932

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.034089 ATTACAACTCTGGGGCTGCC 60.034 55.0 11.05 11.05 0.0 4.85 F
919 1191 0.038744 ATCAAGGTTGGGCAGACCTG 59.961 55.0 11.22 6.69 46.6 4.00 F
1042 1360 0.251165 CCAACCTGATGTCCCGGTTT 60.251 55.0 0.00 0.00 38.9 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 2124 0.737715 CTCGGTTGCTCTTTCCTCCG 60.738 60.000 0.00 0.0 39.4 4.63 R
1952 2282 1.135721 TGCACATCCATCAGAGAGACG 59.864 52.381 0.00 0.0 0.0 4.18 R
2423 2764 1.369448 GAGCAGATACTCCGCGTCG 60.369 63.158 4.92 0.0 0.0 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 8.754991 AATAATATTTTGACGTAACCCATGGA 57.245 30.769 15.22 0.00 0.00 3.41
48 49 6.693315 AATATTTTGACGTAACCCATGGAG 57.307 37.500 15.22 5.95 0.00 3.86
49 50 3.495434 TTTTGACGTAACCCATGGAGT 57.505 42.857 15.22 6.69 0.00 3.85
50 51 4.620589 TTTTGACGTAACCCATGGAGTA 57.379 40.909 15.22 1.26 0.00 2.59
51 52 4.620589 TTTGACGTAACCCATGGAGTAA 57.379 40.909 15.22 0.00 0.00 2.24
52 53 4.829872 TTGACGTAACCCATGGAGTAAT 57.170 40.909 15.22 0.00 0.00 1.89
53 54 4.829872 TGACGTAACCCATGGAGTAATT 57.170 40.909 15.22 1.93 0.00 1.40
54 55 5.168647 TGACGTAACCCATGGAGTAATTT 57.831 39.130 15.22 0.00 0.00 1.82
55 56 4.938832 TGACGTAACCCATGGAGTAATTTG 59.061 41.667 15.22 0.00 0.00 2.32
56 57 5.168647 ACGTAACCCATGGAGTAATTTGA 57.831 39.130 15.22 0.00 0.00 2.69
57 58 5.751586 ACGTAACCCATGGAGTAATTTGAT 58.248 37.500 15.22 0.00 0.00 2.57
58 59 6.184789 ACGTAACCCATGGAGTAATTTGATT 58.815 36.000 15.22 0.00 0.00 2.57
59 60 6.317893 ACGTAACCCATGGAGTAATTTGATTC 59.682 38.462 15.22 0.00 0.00 2.52
60 61 6.238648 CGTAACCCATGGAGTAATTTGATTCC 60.239 42.308 15.22 0.00 0.00 3.01
61 62 5.472301 ACCCATGGAGTAATTTGATTCCT 57.528 39.130 15.22 0.00 0.00 3.36
62 63 5.449553 ACCCATGGAGTAATTTGATTCCTC 58.550 41.667 15.22 0.00 0.00 3.71
63 64 5.044179 ACCCATGGAGTAATTTGATTCCTCA 60.044 40.000 15.22 0.00 27.87 3.86
64 65 6.073314 CCCATGGAGTAATTTGATTCCTCAT 58.927 40.000 15.22 0.00 27.87 2.90
65 66 6.015688 CCCATGGAGTAATTTGATTCCTCATG 60.016 42.308 15.22 0.00 27.87 3.07
66 67 6.015688 CCATGGAGTAATTTGATTCCTCATGG 60.016 42.308 5.56 0.00 32.97 3.66
67 68 4.889409 TGGAGTAATTTGATTCCTCATGGC 59.111 41.667 0.00 0.00 27.87 4.40
68 69 5.136105 GGAGTAATTTGATTCCTCATGGCT 58.864 41.667 0.00 0.00 27.87 4.75
69 70 6.126507 TGGAGTAATTTGATTCCTCATGGCTA 60.127 38.462 0.00 0.00 27.87 3.93
70 71 6.772716 GGAGTAATTTGATTCCTCATGGCTAA 59.227 38.462 0.00 0.00 27.87 3.09
71 72 7.285401 GGAGTAATTTGATTCCTCATGGCTAAA 59.715 37.037 0.00 0.00 27.87 1.85
72 73 8.773033 AGTAATTTGATTCCTCATGGCTAAAT 57.227 30.769 0.00 0.00 0.00 1.40
73 74 8.854117 AGTAATTTGATTCCTCATGGCTAAATC 58.146 33.333 0.00 0.00 0.00 2.17
74 75 7.664552 AATTTGATTCCTCATGGCTAAATCA 57.335 32.000 0.00 1.63 34.38 2.57
75 76 7.850935 ATTTGATTCCTCATGGCTAAATCAT 57.149 32.000 11.70 0.00 35.43 2.45
76 77 6.889301 TTGATTCCTCATGGCTAAATCATC 57.111 37.500 11.70 0.00 35.43 2.92
77 78 5.944135 TGATTCCTCATGGCTAAATCATCA 58.056 37.500 0.00 0.00 32.53 3.07
78 79 6.549242 TGATTCCTCATGGCTAAATCATCAT 58.451 36.000 0.00 0.00 32.53 2.45
79 80 7.008332 TGATTCCTCATGGCTAAATCATCATT 58.992 34.615 0.00 0.00 32.53 2.57
80 81 6.644248 TTCCTCATGGCTAAATCATCATTG 57.356 37.500 0.00 0.00 0.00 2.82
81 82 4.521639 TCCTCATGGCTAAATCATCATTGC 59.478 41.667 0.00 0.00 0.00 3.56
82 83 4.321750 CCTCATGGCTAAATCATCATTGCC 60.322 45.833 0.00 0.00 40.62 4.52
83 84 3.575256 TCATGGCTAAATCATCATTGCCC 59.425 43.478 0.00 0.00 39.60 5.36
84 85 3.317455 TGGCTAAATCATCATTGCCCT 57.683 42.857 0.00 0.00 39.60 5.19
85 86 3.645434 TGGCTAAATCATCATTGCCCTT 58.355 40.909 0.00 0.00 39.60 3.95
86 87 3.385433 TGGCTAAATCATCATTGCCCTTG 59.615 43.478 0.00 0.00 39.60 3.61
87 88 3.385755 GGCTAAATCATCATTGCCCTTGT 59.614 43.478 0.00 0.00 34.81 3.16
88 89 4.500375 GGCTAAATCATCATTGCCCTTGTC 60.500 45.833 0.00 0.00 34.81 3.18
89 90 4.340381 GCTAAATCATCATTGCCCTTGTCT 59.660 41.667 0.00 0.00 0.00 3.41
90 91 4.996788 AAATCATCATTGCCCTTGTCTC 57.003 40.909 0.00 0.00 0.00 3.36
91 92 2.028420 TCATCATTGCCCTTGTCTCG 57.972 50.000 0.00 0.00 0.00 4.04
92 93 0.379669 CATCATTGCCCTTGTCTCGC 59.620 55.000 0.00 0.00 0.00 5.03
93 94 0.254178 ATCATTGCCCTTGTCTCGCT 59.746 50.000 0.00 0.00 0.00 4.93
94 95 0.674581 TCATTGCCCTTGTCTCGCTG 60.675 55.000 0.00 0.00 0.00 5.18
95 96 2.042831 ATTGCCCTTGTCTCGCTGC 61.043 57.895 0.00 0.00 0.00 5.25
96 97 2.475371 ATTGCCCTTGTCTCGCTGCT 62.475 55.000 0.00 0.00 0.00 4.24
97 98 3.123620 GCCCTTGTCTCGCTGCTG 61.124 66.667 0.00 0.00 0.00 4.41
98 99 2.345244 CCCTTGTCTCGCTGCTGT 59.655 61.111 0.00 0.00 0.00 4.40
99 100 1.302033 CCCTTGTCTCGCTGCTGTT 60.302 57.895 0.00 0.00 0.00 3.16
100 101 1.294659 CCCTTGTCTCGCTGCTGTTC 61.295 60.000 0.00 0.00 0.00 3.18
101 102 1.621301 CCTTGTCTCGCTGCTGTTCG 61.621 60.000 0.00 0.00 0.00 3.95
102 103 0.664466 CTTGTCTCGCTGCTGTTCGA 60.664 55.000 0.00 0.00 0.00 3.71
103 104 0.249280 TTGTCTCGCTGCTGTTCGAA 60.249 50.000 0.00 0.00 34.07 3.71
104 105 0.038251 TGTCTCGCTGCTGTTCGAAT 60.038 50.000 0.00 0.00 34.07 3.34
105 106 0.642800 GTCTCGCTGCTGTTCGAATC 59.357 55.000 0.00 0.00 34.07 2.52
106 107 0.798389 TCTCGCTGCTGTTCGAATCG 60.798 55.000 0.00 0.00 34.07 3.34
107 108 2.020559 CGCTGCTGTTCGAATCGC 59.979 61.111 0.00 7.91 0.00 4.58
108 109 2.020559 GCTGCTGTTCGAATCGCG 59.979 61.111 0.00 0.00 42.69 5.87
109 110 2.730672 GCTGCTGTTCGAATCGCGT 61.731 57.895 5.77 0.00 41.80 6.01
110 111 1.057822 CTGCTGTTCGAATCGCGTG 59.942 57.895 5.77 1.12 41.80 5.34
111 112 1.344226 CTGCTGTTCGAATCGCGTGA 61.344 55.000 5.77 0.00 41.80 4.35
112 113 1.341802 GCTGTTCGAATCGCGTGAG 59.658 57.895 5.77 0.00 41.80 3.51
124 125 3.385384 CGTGAGCTCCAGCCTCCA 61.385 66.667 12.15 0.00 43.38 3.86
125 126 2.729479 CGTGAGCTCCAGCCTCCAT 61.729 63.158 12.15 0.00 43.38 3.41
126 127 1.153208 GTGAGCTCCAGCCTCCATG 60.153 63.158 12.15 0.00 43.38 3.66
127 128 2.372890 TGAGCTCCAGCCTCCATGG 61.373 63.158 12.15 4.97 43.38 3.66
128 129 2.285969 AGCTCCAGCCTCCATGGT 60.286 61.111 12.58 0.00 43.38 3.55
129 130 1.003442 AGCTCCAGCCTCCATGGTA 59.997 57.895 12.58 0.00 43.38 3.25
130 131 0.621571 AGCTCCAGCCTCCATGGTAA 60.622 55.000 12.58 0.00 43.38 2.85
131 132 0.475906 GCTCCAGCCTCCATGGTAAT 59.524 55.000 12.58 0.00 39.01 1.89
132 133 1.816961 GCTCCAGCCTCCATGGTAATG 60.817 57.143 12.58 6.81 39.01 1.90
146 147 6.431198 CATGGTAATGGTTGGTAGTAACAC 57.569 41.667 0.00 0.00 32.22 3.32
147 148 5.829062 TGGTAATGGTTGGTAGTAACACT 57.171 39.130 0.00 0.00 32.22 3.55
148 149 5.797051 TGGTAATGGTTGGTAGTAACACTC 58.203 41.667 0.00 0.00 32.22 3.51
149 150 5.307456 TGGTAATGGTTGGTAGTAACACTCA 59.693 40.000 0.00 0.00 32.22 3.41
150 151 5.873164 GGTAATGGTTGGTAGTAACACTCAG 59.127 44.000 0.00 0.00 32.22 3.35
151 152 5.818678 AATGGTTGGTAGTAACACTCAGA 57.181 39.130 0.00 0.00 32.22 3.27
152 153 4.595762 TGGTTGGTAGTAACACTCAGAC 57.404 45.455 0.00 0.00 32.22 3.51
153 154 3.962063 TGGTTGGTAGTAACACTCAGACA 59.038 43.478 0.00 0.00 32.22 3.41
154 155 4.591498 TGGTTGGTAGTAACACTCAGACAT 59.409 41.667 0.00 0.00 32.22 3.06
155 156 5.169295 GGTTGGTAGTAACACTCAGACATC 58.831 45.833 0.00 0.00 32.22 3.06
156 157 5.279306 GGTTGGTAGTAACACTCAGACATCA 60.279 44.000 0.00 0.00 32.22 3.07
157 158 5.644977 TGGTAGTAACACTCAGACATCAG 57.355 43.478 0.00 0.00 0.00 2.90
158 159 5.077564 TGGTAGTAACACTCAGACATCAGT 58.922 41.667 0.00 0.00 0.00 3.41
159 160 5.048013 TGGTAGTAACACTCAGACATCAGTG 60.048 44.000 0.00 0.00 44.83 3.66
160 161 3.919216 AGTAACACTCAGACATCAGTGC 58.081 45.455 0.00 0.00 43.37 4.40
161 162 2.916702 AACACTCAGACATCAGTGCA 57.083 45.000 0.00 0.00 43.37 4.57
162 163 3.413846 AACACTCAGACATCAGTGCAT 57.586 42.857 0.00 0.00 43.37 3.96
163 164 2.969990 ACACTCAGACATCAGTGCATC 58.030 47.619 0.00 0.00 43.37 3.91
164 165 2.301009 ACACTCAGACATCAGTGCATCA 59.699 45.455 0.00 0.00 43.37 3.07
165 166 2.671888 CACTCAGACATCAGTGCATCAC 59.328 50.000 0.00 0.00 33.96 3.06
166 167 2.566279 ACTCAGACATCAGTGCATCACT 59.434 45.455 0.00 0.00 46.51 3.41
167 168 3.766051 ACTCAGACATCAGTGCATCACTA 59.234 43.478 0.00 0.00 43.43 2.74
168 169 4.405036 ACTCAGACATCAGTGCATCACTAT 59.595 41.667 0.00 0.00 43.43 2.12
169 170 5.105023 ACTCAGACATCAGTGCATCACTATT 60.105 40.000 0.00 0.00 43.43 1.73
170 171 5.354767 TCAGACATCAGTGCATCACTATTC 58.645 41.667 0.00 0.00 43.43 1.75
171 172 5.105228 TCAGACATCAGTGCATCACTATTCA 60.105 40.000 0.00 0.00 43.43 2.57
172 173 5.006455 CAGACATCAGTGCATCACTATTCAC 59.994 44.000 0.00 0.00 43.43 3.18
173 174 5.095145 ACATCAGTGCATCACTATTCACT 57.905 39.130 0.00 0.00 43.43 3.41
174 175 5.114780 ACATCAGTGCATCACTATTCACTC 58.885 41.667 0.00 0.00 43.43 3.51
175 176 4.806640 TCAGTGCATCACTATTCACTCA 57.193 40.909 0.00 0.00 43.43 3.41
176 177 4.752146 TCAGTGCATCACTATTCACTCAG 58.248 43.478 0.00 0.00 43.43 3.35
177 178 4.463891 TCAGTGCATCACTATTCACTCAGA 59.536 41.667 0.00 0.00 43.43 3.27
178 179 5.047092 TCAGTGCATCACTATTCACTCAGAA 60.047 40.000 0.00 0.00 43.43 3.02
179 180 5.063186 CAGTGCATCACTATTCACTCAGAAC 59.937 44.000 0.00 0.00 43.43 3.01
180 181 4.032217 GTGCATCACTATTCACTCAGAACG 59.968 45.833 0.00 0.00 39.49 3.95
181 182 4.082245 TGCATCACTATTCACTCAGAACGA 60.082 41.667 0.00 0.00 39.49 3.85
182 183 9.902680 AGTGCATCACTATTCACTCAGAACGAG 62.903 44.444 0.00 0.00 43.46 4.18
183 184 5.677344 GCATCACTATTCACTCAGAACGAGA 60.677 44.000 0.00 0.00 45.45 4.04
184 185 6.502652 CATCACTATTCACTCAGAACGAGAT 58.497 40.000 0.00 0.00 45.45 2.75
185 186 7.643579 CATCACTATTCACTCAGAACGAGATA 58.356 38.462 0.00 0.00 45.45 1.98
186 187 7.625828 TCACTATTCACTCAGAACGAGATAA 57.374 36.000 0.00 0.00 45.45 1.75
187 188 7.698628 TCACTATTCACTCAGAACGAGATAAG 58.301 38.462 0.00 0.00 45.45 1.73
188 189 7.553044 TCACTATTCACTCAGAACGAGATAAGA 59.447 37.037 0.00 0.00 45.45 2.10
189 190 7.855409 CACTATTCACTCAGAACGAGATAAGAG 59.145 40.741 0.00 0.00 45.45 2.85
190 191 4.624336 TCACTCAGAACGAGATAAGAGC 57.376 45.455 0.00 0.00 45.45 4.09
191 192 4.010349 TCACTCAGAACGAGATAAGAGCA 58.990 43.478 0.00 0.00 45.45 4.26
192 193 4.101942 CACTCAGAACGAGATAAGAGCAC 58.898 47.826 0.00 0.00 45.45 4.40
193 194 3.759086 ACTCAGAACGAGATAAGAGCACA 59.241 43.478 0.00 0.00 45.45 4.57
194 195 4.098055 TCAGAACGAGATAAGAGCACAC 57.902 45.455 0.00 0.00 0.00 3.82
195 196 3.506067 TCAGAACGAGATAAGAGCACACA 59.494 43.478 0.00 0.00 0.00 3.72
196 197 3.610242 CAGAACGAGATAAGAGCACACAC 59.390 47.826 0.00 0.00 0.00 3.82
197 198 3.508012 AGAACGAGATAAGAGCACACACT 59.492 43.478 0.00 0.00 0.00 3.55
198 199 3.944055 ACGAGATAAGAGCACACACTT 57.056 42.857 0.00 0.00 0.00 3.16
199 200 4.258702 ACGAGATAAGAGCACACACTTT 57.741 40.909 0.00 0.00 0.00 2.66
200 201 4.632153 ACGAGATAAGAGCACACACTTTT 58.368 39.130 0.00 0.00 0.00 2.27
201 202 4.686554 ACGAGATAAGAGCACACACTTTTC 59.313 41.667 0.00 0.00 0.00 2.29
202 203 4.686091 CGAGATAAGAGCACACACTTTTCA 59.314 41.667 0.00 0.00 30.62 2.69
203 204 5.164012 CGAGATAAGAGCACACACTTTTCAG 60.164 44.000 0.00 0.00 30.62 3.02
204 205 5.858381 AGATAAGAGCACACACTTTTCAGA 58.142 37.500 0.00 0.00 30.62 3.27
205 206 6.471146 AGATAAGAGCACACACTTTTCAGAT 58.529 36.000 0.00 0.00 30.62 2.90
206 207 6.939163 AGATAAGAGCACACACTTTTCAGATT 59.061 34.615 0.00 0.00 30.62 2.40
207 208 8.097038 AGATAAGAGCACACACTTTTCAGATTA 58.903 33.333 0.00 0.00 30.62 1.75
208 209 5.931441 AGAGCACACACTTTTCAGATTAC 57.069 39.130 0.00 0.00 0.00 1.89
209 210 5.368145 AGAGCACACACTTTTCAGATTACA 58.632 37.500 0.00 0.00 0.00 2.41
210 211 5.822519 AGAGCACACACTTTTCAGATTACAA 59.177 36.000 0.00 0.00 0.00 2.41
211 212 5.821204 AGCACACACTTTTCAGATTACAAC 58.179 37.500 0.00 0.00 0.00 3.32
212 213 5.590259 AGCACACACTTTTCAGATTACAACT 59.410 36.000 0.00 0.00 0.00 3.16
213 214 5.909610 GCACACACTTTTCAGATTACAACTC 59.090 40.000 0.00 0.00 0.00 3.01
214 215 6.238484 GCACACACTTTTCAGATTACAACTCT 60.238 38.462 0.00 0.00 0.00 3.24
215 216 7.128331 CACACACTTTTCAGATTACAACTCTG 58.872 38.462 0.00 0.00 41.23 3.35
216 217 6.260936 ACACACTTTTCAGATTACAACTCTGG 59.739 38.462 0.87 0.00 40.44 3.86
217 218 5.765182 ACACTTTTCAGATTACAACTCTGGG 59.235 40.000 0.87 0.00 40.44 4.45
218 219 5.182001 CACTTTTCAGATTACAACTCTGGGG 59.818 44.000 0.87 0.00 40.44 4.96
219 220 3.350219 TTCAGATTACAACTCTGGGGC 57.650 47.619 0.87 0.00 40.44 5.80
220 221 2.551270 TCAGATTACAACTCTGGGGCT 58.449 47.619 0.87 0.00 40.44 5.19
221 222 2.237143 TCAGATTACAACTCTGGGGCTG 59.763 50.000 0.87 0.00 40.44 4.85
222 223 1.065126 AGATTACAACTCTGGGGCTGC 60.065 52.381 0.00 0.00 0.00 5.25
223 224 0.034089 ATTACAACTCTGGGGCTGCC 60.034 55.000 11.05 11.05 0.00 4.85
224 225 1.422977 TTACAACTCTGGGGCTGCCA 61.423 55.000 22.05 0.00 0.00 4.92
225 226 1.207488 TACAACTCTGGGGCTGCCAT 61.207 55.000 22.05 0.00 0.00 4.40
226 227 2.050350 CAACTCTGGGGCTGCCATG 61.050 63.158 22.05 9.63 0.00 3.66
227 228 3.292481 AACTCTGGGGCTGCCATGG 62.292 63.158 22.05 7.63 0.00 3.66
241 242 0.101040 CCATGGCAACGGCAATAGTG 59.899 55.000 0.00 0.00 42.43 2.74
254 255 3.952535 GCAATAGTGGCCAGTTTATTCG 58.047 45.455 20.55 12.11 0.00 3.34
260 261 5.722021 AGTGGCCAGTTTATTCGAAATTT 57.278 34.783 5.11 0.00 0.00 1.82
261 262 5.469479 AGTGGCCAGTTTATTCGAAATTTG 58.531 37.500 5.11 0.00 0.00 2.32
286 287 3.160047 AGCTCGGCCTCCATGGAG 61.160 66.667 31.69 31.69 41.63 3.86
384 387 5.252547 ACATACATGAAGGCATAACACACA 58.747 37.500 0.00 0.00 32.27 3.72
484 487 8.347771 CACATGATACTATTCATCCCAAAAGTG 58.652 37.037 0.00 0.00 34.09 3.16
485 488 8.274322 ACATGATACTATTCATCCCAAAAGTGA 58.726 33.333 0.00 0.00 34.09 3.41
491 494 8.421249 ACTATTCATCCCAAAAGTGAATGAAA 57.579 30.769 9.40 0.00 41.31 2.69
498 501 6.287525 TCCCAAAAGTGAATGAAATTGTTCC 58.712 36.000 0.00 0.00 36.07 3.62
508 511 6.596888 TGAATGAAATTGTTCCTTTTGCACAA 59.403 30.769 0.00 0.00 36.07 3.33
511 514 8.674263 ATGAAATTGTTCCTTTTGCACAAATA 57.326 26.923 0.00 0.00 34.19 1.40
522 525 5.963176 TTTGCACAAATAGCATCTCAAGA 57.037 34.783 0.00 0.00 42.33 3.02
575 578 7.899178 CACATTACATCCTTGTGTACTTGTA 57.101 36.000 0.00 0.00 36.77 2.41
576 579 8.492673 CACATTACATCCTTGTGTACTTGTAT 57.507 34.615 0.00 0.00 36.77 2.29
620 885 1.134729 CCAAAAATTCGGCCTCCATGG 60.135 52.381 4.97 4.97 39.35 3.66
622 887 1.767759 AAAATTCGGCCTCCATGGAG 58.232 50.000 31.69 31.69 41.63 3.86
630 895 3.160047 CTCCATGGAGGCCGAGCT 61.160 66.667 31.14 0.00 38.51 4.09
631 896 3.157252 TCCATGGAGGCCGAGCTC 61.157 66.667 11.44 2.73 37.29 4.09
632 897 4.247380 CCATGGAGGCCGAGCTCC 62.247 72.222 5.56 0.00 40.05 4.70
635 900 2.927856 TGGAGGCCGAGCTCCAAA 60.928 61.111 8.96 0.00 45.68 3.28
636 901 2.351276 GGAGGCCGAGCTCCAAAA 59.649 61.111 8.47 0.00 39.45 2.44
637 902 1.077429 GGAGGCCGAGCTCCAAAAT 60.077 57.895 8.47 0.00 39.45 1.82
638 903 1.379642 GGAGGCCGAGCTCCAAAATG 61.380 60.000 8.47 0.00 39.45 2.32
639 904 1.997928 GAGGCCGAGCTCCAAAATGC 61.998 60.000 8.47 1.49 0.00 3.56
640 905 2.491621 GCCGAGCTCCAAAATGCC 59.508 61.111 8.47 0.00 0.00 4.40
641 906 2.793946 CCGAGCTCCAAAATGCCG 59.206 61.111 8.47 0.00 0.00 5.69
642 907 2.040544 CCGAGCTCCAAAATGCCGT 61.041 57.895 8.47 0.00 0.00 5.68
643 908 1.586154 CCGAGCTCCAAAATGCCGTT 61.586 55.000 8.47 0.00 0.00 4.44
644 909 0.179189 CGAGCTCCAAAATGCCGTTC 60.179 55.000 8.47 0.00 0.00 3.95
645 910 1.168714 GAGCTCCAAAATGCCGTTCT 58.831 50.000 0.87 0.00 0.00 3.01
646 911 1.131315 GAGCTCCAAAATGCCGTTCTC 59.869 52.381 0.87 0.00 0.00 2.87
647 912 0.171231 GCTCCAAAATGCCGTTCTCC 59.829 55.000 0.00 0.00 0.00 3.71
648 913 1.533625 CTCCAAAATGCCGTTCTCCA 58.466 50.000 0.00 0.00 0.00 3.86
649 914 1.470098 CTCCAAAATGCCGTTCTCCAG 59.530 52.381 0.00 0.00 0.00 3.86
663 928 6.093633 GCCGTTCTCCAGTTTATTCTGTAAAT 59.906 38.462 0.00 0.00 34.02 1.40
695 960 7.041984 TGTGTTTGTACTAATGCATCACGTTTA 60.042 33.333 0.00 0.00 32.55 2.01
712 977 4.927425 ACGTTTATATGCCTATAACCAGCG 59.073 41.667 1.38 6.75 31.11 5.18
717 982 0.899019 TGCCTATAACCAGCGTCACA 59.101 50.000 0.00 0.00 0.00 3.58
750 1015 2.480037 TGTGCGCTGTCATGTTTCTTAG 59.520 45.455 9.73 0.00 0.00 2.18
757 1022 5.622378 GCTGTCATGTTTCTTAGTTAGCAC 58.378 41.667 0.00 0.00 0.00 4.40
758 1023 5.179368 GCTGTCATGTTTCTTAGTTAGCACA 59.821 40.000 0.00 0.00 0.00 4.57
766 1031 6.921857 TGTTTCTTAGTTAGCACACAGTCTAC 59.078 38.462 0.00 0.00 0.00 2.59
773 1042 9.635520 TTAGTTAGCACACAGTCTACTTTAATC 57.364 33.333 0.00 0.00 0.00 1.75
800 1069 9.202273 CTTAGCATCCACTTCATATTCTTCTAC 57.798 37.037 0.00 0.00 0.00 2.59
862 1134 1.856802 GCAACCTGCAAAACCAAGAG 58.143 50.000 0.00 0.00 44.26 2.85
864 1136 2.799562 GCAACCTGCAAAACCAAGAGAC 60.800 50.000 0.00 0.00 44.26 3.36
865 1137 1.308998 ACCTGCAAAACCAAGAGACG 58.691 50.000 0.00 0.00 0.00 4.18
880 1152 0.392461 AGACGGCTGTTGTGTGTTGT 60.392 50.000 0.00 0.00 0.00 3.32
886 1158 1.064060 GCTGTTGTGTGTTGTGTCCTC 59.936 52.381 0.00 0.00 0.00 3.71
891 1163 0.884704 GTGTGTTGTGTCCTCGCCAT 60.885 55.000 0.00 0.00 0.00 4.40
916 1188 1.168714 GACATCAAGGTTGGGCAGAC 58.831 55.000 0.00 0.00 0.00 3.51
919 1191 0.038744 ATCAAGGTTGGGCAGACCTG 59.961 55.000 11.22 6.69 46.60 4.00
967 1239 2.186384 CTGCTGGGCTCCTTCTCG 59.814 66.667 0.00 0.00 0.00 4.04
971 1243 2.683933 TGGGCTCCTTCTCGGACC 60.684 66.667 0.00 0.00 36.69 4.46
974 1246 1.518302 GGCTCCTTCTCGGACCTTC 59.482 63.158 0.00 0.00 36.69 3.46
1007 1279 2.821366 CCTGCCGCTCATGGTGTC 60.821 66.667 0.00 0.00 0.00 3.67
1041 1359 1.131303 TCCAACCTGATGTCCCGGTT 61.131 55.000 0.00 0.00 41.47 4.44
1042 1360 0.251165 CCAACCTGATGTCCCGGTTT 60.251 55.000 0.00 0.00 38.90 3.27
1043 1361 1.003812 CCAACCTGATGTCCCGGTTTA 59.996 52.381 0.00 0.00 38.90 2.01
1048 1366 2.418746 CCTGATGTCCCGGTTTACTCTG 60.419 54.545 0.00 0.00 0.00 3.35
1061 1391 4.359706 GTTTACTCTGCAAAGTTTGGTGG 58.640 43.478 17.11 2.95 0.00 4.61
1144 1474 8.151596 AGATTCCCCTAATTAATCTTTCTCGTC 58.848 37.037 0.00 0.00 36.76 4.20
1167 1497 0.464452 GTAATGACCCCCAGAGTCCG 59.536 60.000 0.00 0.00 33.09 4.79
1281 1611 2.186160 TGTTTCACCGCCACAGCTG 61.186 57.895 13.48 13.48 36.60 4.24
1366 1696 2.154462 CACATCTCCTTGTCACCAACC 58.846 52.381 0.00 0.00 0.00 3.77
1388 1718 0.843309 TCCCACAGTTTCTTCTGGCA 59.157 50.000 0.00 0.00 39.48 4.92
1390 1720 2.642311 TCCCACAGTTTCTTCTGGCATA 59.358 45.455 0.00 0.00 39.48 3.14
1391 1721 2.749621 CCCACAGTTTCTTCTGGCATAC 59.250 50.000 0.00 0.00 39.48 2.39
1794 2124 1.450312 CATGAACCCGGAGAGGTGC 60.450 63.158 0.73 0.00 40.05 5.01
1952 2282 1.225704 CCCCCAGCATGTTCTCTCC 59.774 63.158 0.00 0.00 0.00 3.71
1959 2289 1.748493 AGCATGTTCTCTCCGTCTCTC 59.252 52.381 0.00 0.00 0.00 3.20
1975 2305 4.500375 CGTCTCTCTGATGGATGTGCATTA 60.500 45.833 0.00 0.00 0.00 1.90
2001 2331 8.677148 TTTTTATGCATGACTATTACTCCCTC 57.323 34.615 10.16 0.00 0.00 4.30
2002 2332 4.899352 ATGCATGACTATTACTCCCTCC 57.101 45.455 0.00 0.00 0.00 4.30
2003 2333 2.628178 TGCATGACTATTACTCCCTCCG 59.372 50.000 0.00 0.00 0.00 4.63
2004 2334 2.891580 GCATGACTATTACTCCCTCCGA 59.108 50.000 0.00 0.00 0.00 4.55
2005 2335 3.511934 GCATGACTATTACTCCCTCCGAT 59.488 47.826 0.00 0.00 0.00 4.18
2006 2336 4.705507 GCATGACTATTACTCCCTCCGATA 59.294 45.833 0.00 0.00 0.00 2.92
2007 2337 5.185249 GCATGACTATTACTCCCTCCGATAA 59.815 44.000 0.00 0.00 0.00 1.75
2008 2338 6.626181 GCATGACTATTACTCCCTCCGATAAG 60.626 46.154 0.00 0.00 0.00 1.73
2009 2339 6.196918 TGACTATTACTCCCTCCGATAAGA 57.803 41.667 0.00 0.00 0.00 2.10
2010 2340 6.607970 TGACTATTACTCCCTCCGATAAGAA 58.392 40.000 0.00 0.00 0.00 2.52
2011 2341 7.064866 TGACTATTACTCCCTCCGATAAGAAA 58.935 38.462 0.00 0.00 0.00 2.52
2012 2342 7.562454 TGACTATTACTCCCTCCGATAAGAAAA 59.438 37.037 0.00 0.00 0.00 2.29
2013 2343 8.493787 ACTATTACTCCCTCCGATAAGAAAAT 57.506 34.615 0.00 0.00 0.00 1.82
2014 2344 9.597681 ACTATTACTCCCTCCGATAAGAAAATA 57.402 33.333 0.00 0.00 0.00 1.40
2019 2349 8.722622 ACTCCCTCCGATAAGAAAATATAAGA 57.277 34.615 0.00 0.00 0.00 2.10
2020 2350 8.808092 ACTCCCTCCGATAAGAAAATATAAGAG 58.192 37.037 0.00 0.00 0.00 2.85
2021 2351 7.612677 TCCCTCCGATAAGAAAATATAAGAGC 58.387 38.462 0.00 0.00 0.00 4.09
2022 2352 6.531948 CCCTCCGATAAGAAAATATAAGAGCG 59.468 42.308 0.00 0.00 0.00 5.03
2023 2353 7.091443 CCTCCGATAAGAAAATATAAGAGCGT 58.909 38.462 0.00 0.00 0.00 5.07
2024 2354 7.599245 CCTCCGATAAGAAAATATAAGAGCGTT 59.401 37.037 0.00 0.00 0.00 4.84
2025 2355 8.882415 TCCGATAAGAAAATATAAGAGCGTTT 57.118 30.769 0.00 0.00 0.00 3.60
2026 2356 9.970395 TCCGATAAGAAAATATAAGAGCGTTTA 57.030 29.630 0.00 0.00 0.00 2.01
2041 2371 7.811117 AGAGCGTTTAGATCACTACTAATCT 57.189 36.000 0.00 0.00 37.82 2.40
2042 2372 8.905660 AGAGCGTTTAGATCACTACTAATCTA 57.094 34.615 0.00 0.00 37.82 1.98
2043 2373 9.339850 AGAGCGTTTAGATCACTACTAATCTAA 57.660 33.333 0.00 1.67 40.80 2.10
2044 2374 9.947669 GAGCGTTTAGATCACTACTAATCTAAA 57.052 33.333 11.55 11.55 45.43 1.85
2049 2379 9.947669 TTTAGATCACTACTAATCTAAACGCTC 57.052 33.333 11.55 0.00 43.99 5.03
2050 2380 7.811117 AGATCACTACTAATCTAAACGCTCT 57.189 36.000 0.00 0.00 30.50 4.09
2051 2381 8.228035 AGATCACTACTAATCTAAACGCTCTT 57.772 34.615 0.00 0.00 30.50 2.85
2052 2382 9.339850 AGATCACTACTAATCTAAACGCTCTTA 57.660 33.333 0.00 0.00 30.50 2.10
2053 2383 9.384682 GATCACTACTAATCTAAACGCTCTTAC 57.615 37.037 0.00 0.00 0.00 2.34
2054 2384 8.272545 TCACTACTAATCTAAACGCTCTTACA 57.727 34.615 0.00 0.00 0.00 2.41
2055 2385 8.900781 TCACTACTAATCTAAACGCTCTTACAT 58.099 33.333 0.00 0.00 0.00 2.29
2056 2386 9.517609 CACTACTAATCTAAACGCTCTTACATT 57.482 33.333 0.00 0.00 0.00 2.71
2060 2390 9.654663 ACTAATCTAAACGCTCTTACATTTCTT 57.345 29.630 0.00 0.00 0.00 2.52
2064 2394 7.946043 TCTAAACGCTCTTACATTTCTTTACG 58.054 34.615 0.00 0.00 0.00 3.18
2065 2395 5.526010 AACGCTCTTACATTTCTTTACGG 57.474 39.130 0.00 0.00 0.00 4.02
2066 2396 4.813027 ACGCTCTTACATTTCTTTACGGA 58.187 39.130 0.00 0.00 0.00 4.69
2067 2397 4.863131 ACGCTCTTACATTTCTTTACGGAG 59.137 41.667 0.00 0.00 0.00 4.63
2068 2398 4.267928 CGCTCTTACATTTCTTTACGGAGG 59.732 45.833 0.00 0.00 0.00 4.30
2069 2399 4.571176 GCTCTTACATTTCTTTACGGAGGG 59.429 45.833 0.00 0.00 0.00 4.30
2070 2400 5.626116 GCTCTTACATTTCTTTACGGAGGGA 60.626 44.000 0.00 0.00 0.00 4.20
2071 2401 5.974108 TCTTACATTTCTTTACGGAGGGAG 58.026 41.667 0.00 0.00 0.00 4.30
2085 2415 2.700897 GGAGGGAGTATTTGCTAGCTGA 59.299 50.000 17.23 4.58 0.00 4.26
2151 2481 8.700439 ATGTCCATATCAAAATCATGTGATCA 57.300 30.769 0.00 0.00 36.00 2.92
2152 2482 8.700439 TGTCCATATCAAAATCATGTGATCAT 57.300 30.769 0.00 0.00 36.00 2.45
2153 2483 8.789762 TGTCCATATCAAAATCATGTGATCATC 58.210 33.333 0.00 0.00 36.00 2.92
2156 2486 8.674607 CCATATCAAAATCATGTGATCATCGAT 58.325 33.333 0.00 0.00 36.00 3.59
2167 2497 6.304356 TGTGATCATCGATAGGAAATTTGC 57.696 37.500 0.00 0.68 0.00 3.68
2171 2501 3.807622 TCATCGATAGGAAATTTGCCGTC 59.192 43.478 6.02 4.21 0.00 4.79
2176 2506 4.549489 CGATAGGAAATTTGCCGTCGTTAC 60.549 45.833 19.32 0.98 35.32 2.50
2182 2512 1.666054 TTTGCCGTCGTTACTTTGGT 58.334 45.000 0.00 0.00 0.00 3.67
2184 2514 1.782044 TGCCGTCGTTACTTTGGTAC 58.218 50.000 0.00 0.00 0.00 3.34
2185 2515 0.710017 GCCGTCGTTACTTTGGTACG 59.290 55.000 0.00 0.00 0.00 3.67
2186 2516 1.930371 GCCGTCGTTACTTTGGTACGT 60.930 52.381 0.00 0.00 0.00 3.57
2187 2517 1.715519 CCGTCGTTACTTTGGTACGTG 59.284 52.381 0.00 0.00 0.00 4.49
2189 2519 2.151736 CGTCGTTACTTTGGTACGTGTG 59.848 50.000 0.00 0.00 0.00 3.82
2190 2520 3.371168 GTCGTTACTTTGGTACGTGTGA 58.629 45.455 0.00 0.00 0.00 3.58
2240 2580 5.823209 TCAGATTTTATGGCAGTGATGTG 57.177 39.130 0.00 0.00 0.00 3.21
2243 2583 5.803461 CAGATTTTATGGCAGTGATGTGTTG 59.197 40.000 0.00 0.00 0.00 3.33
2263 2603 3.671716 TGGACTATGATCTGATGCATGC 58.328 45.455 11.82 11.82 0.00 4.06
2290 2630 3.053991 TGTTTCTCTGTCCCAAACCTGAA 60.054 43.478 0.00 0.00 30.32 3.02
2294 2634 0.179029 CTGTCCCAAACCTGAACCGT 60.179 55.000 0.00 0.00 0.00 4.83
2295 2635 0.256464 TGTCCCAAACCTGAACCGTT 59.744 50.000 0.00 0.00 0.00 4.44
2297 2637 2.092538 TGTCCCAAACCTGAACCGTTTA 60.093 45.455 0.00 0.00 32.27 2.01
2301 2641 2.292292 CCAAACCTGAACCGTTTACTGG 59.708 50.000 0.00 0.00 32.27 4.00
2341 2682 9.106070 GTTTCTGGGTATTAGTGTTGGTTATAG 57.894 37.037 0.00 0.00 0.00 1.31
2428 2769 7.627585 TGAAAGGTAACATATATAACGACGC 57.372 36.000 0.00 0.00 41.41 5.19
2496 2863 8.764287 ACTTTGATAAATGTTTTAAGTGCTTGC 58.236 29.630 0.00 0.00 0.00 4.01
2507 2874 8.121708 TGTTTTAAGTGCTTGCAAATTTTCATC 58.878 29.630 0.00 0.00 0.00 2.92
2522 2889 9.581099 CAAATTTTCATCATGAGATCACATTCA 57.419 29.630 2.55 0.00 30.20 2.57
2603 2971 4.320608 TTTGGAGCACTGATTTTGTTCC 57.679 40.909 0.00 0.00 42.97 3.62
2631 3000 2.492881 TGCCATGCCTTACAAGAATGTG 59.507 45.455 0.00 0.00 40.84 3.21
2632 3001 2.754552 GCCATGCCTTACAAGAATGTGA 59.245 45.455 0.00 0.00 40.84 3.58
2645 3014 9.623000 TTACAAGAATGTGATCTCATGATGAAT 57.377 29.630 10.87 0.00 40.84 2.57
2667 3036 7.552687 TGAATATTAGCAAACACTTACTCCCTG 59.447 37.037 0.00 0.00 0.00 4.45
2685 5835 5.850614 TCCCTGCGTTCCTAAATATAAGTC 58.149 41.667 0.00 0.00 0.00 3.01
2777 5927 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
2783 5933 6.624352 TCCGTATGTAGTCCATAGTGTAAC 57.376 41.667 0.00 0.00 36.71 2.50
2786 5936 6.861572 CCGTATGTAGTCCATAGTGTAACATG 59.138 42.308 0.00 0.00 36.71 3.21
2795 5945 9.216117 AGTCCATAGTGTAACATGTAAAAAGAC 57.784 33.333 0.00 0.00 41.43 3.01
2815 5965 8.904099 AAAGACTTATATTTACGAATGGAGGG 57.096 34.615 0.00 0.00 0.00 4.30
2817 5967 7.897864 AGACTTATATTTACGAATGGAGGGAG 58.102 38.462 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.191479 TCCATGGGTTACGTCAAAATATTATTT 57.809 29.630 13.02 0.00 0.00 1.40
22 23 8.754991 TCCATGGGTTACGTCAAAATATTATT 57.245 30.769 13.02 0.00 0.00 1.40
23 24 7.996644 ACTCCATGGGTTACGTCAAAATATTAT 59.003 33.333 13.02 0.00 0.00 1.28
24 25 7.340256 ACTCCATGGGTTACGTCAAAATATTA 58.660 34.615 13.02 0.00 0.00 0.98
25 26 6.184789 ACTCCATGGGTTACGTCAAAATATT 58.815 36.000 13.02 0.00 0.00 1.28
26 27 5.751586 ACTCCATGGGTTACGTCAAAATAT 58.248 37.500 13.02 0.00 0.00 1.28
27 28 5.168647 ACTCCATGGGTTACGTCAAAATA 57.831 39.130 13.02 0.00 0.00 1.40
28 29 4.028993 ACTCCATGGGTTACGTCAAAAT 57.971 40.909 13.02 0.00 0.00 1.82
29 30 3.495434 ACTCCATGGGTTACGTCAAAA 57.505 42.857 13.02 0.00 0.00 2.44
30 31 4.620589 TTACTCCATGGGTTACGTCAAA 57.379 40.909 13.02 0.00 0.00 2.69
31 32 4.829872 ATTACTCCATGGGTTACGTCAA 57.170 40.909 13.02 0.00 0.00 3.18
32 33 4.829872 AATTACTCCATGGGTTACGTCA 57.170 40.909 13.02 0.00 0.00 4.35
33 34 5.180271 TCAAATTACTCCATGGGTTACGTC 58.820 41.667 13.02 0.00 0.00 4.34
34 35 5.168647 TCAAATTACTCCATGGGTTACGT 57.831 39.130 13.02 4.51 0.00 3.57
35 36 6.238648 GGAATCAAATTACTCCATGGGTTACG 60.239 42.308 13.02 0.00 0.00 3.18
36 37 6.833933 AGGAATCAAATTACTCCATGGGTTAC 59.166 38.462 13.02 0.00 0.00 2.50
37 38 6.980577 AGGAATCAAATTACTCCATGGGTTA 58.019 36.000 13.02 3.18 0.00 2.85
38 39 5.842339 AGGAATCAAATTACTCCATGGGTT 58.158 37.500 13.02 1.11 0.00 4.11
39 40 5.449553 GAGGAATCAAATTACTCCATGGGT 58.550 41.667 13.02 11.37 43.13 4.51
47 48 8.773033 ATTTAGCCATGAGGAATCAAATTACT 57.227 30.769 0.00 0.00 35.72 2.24
48 49 8.632679 TGATTTAGCCATGAGGAATCAAATTAC 58.367 33.333 0.00 0.00 34.51 1.89
49 50 8.765488 TGATTTAGCCATGAGGAATCAAATTA 57.235 30.769 0.00 0.00 34.51 1.40
50 51 7.664552 TGATTTAGCCATGAGGAATCAAATT 57.335 32.000 0.00 0.00 34.51 1.82
51 52 7.507956 TGATGATTTAGCCATGAGGAATCAAAT 59.492 33.333 13.70 3.84 38.43 2.32
52 53 6.834969 TGATGATTTAGCCATGAGGAATCAAA 59.165 34.615 13.70 6.71 38.43 2.69
53 54 6.367161 TGATGATTTAGCCATGAGGAATCAA 58.633 36.000 13.70 2.02 38.43 2.57
54 55 5.944135 TGATGATTTAGCCATGAGGAATCA 58.056 37.500 12.71 12.71 38.94 2.57
55 56 7.313646 CAATGATGATTTAGCCATGAGGAATC 58.686 38.462 0.00 0.00 36.89 2.52
56 57 6.295123 GCAATGATGATTTAGCCATGAGGAAT 60.295 38.462 0.00 0.00 36.89 3.01
57 58 5.010314 GCAATGATGATTTAGCCATGAGGAA 59.990 40.000 0.00 0.00 36.89 3.36
58 59 4.521639 GCAATGATGATTTAGCCATGAGGA 59.478 41.667 0.00 0.00 36.89 3.71
59 60 4.321750 GGCAATGATGATTTAGCCATGAGG 60.322 45.833 0.00 0.00 41.63 3.86
60 61 4.321750 GGGCAATGATGATTTAGCCATGAG 60.322 45.833 8.21 0.00 43.72 2.90
61 62 3.575256 GGGCAATGATGATTTAGCCATGA 59.425 43.478 8.21 0.00 43.72 3.07
62 63 3.576982 AGGGCAATGATGATTTAGCCATG 59.423 43.478 8.21 0.00 43.72 3.66
63 64 3.853207 AGGGCAATGATGATTTAGCCAT 58.147 40.909 8.21 0.00 43.72 4.40
64 65 3.317455 AGGGCAATGATGATTTAGCCA 57.683 42.857 8.21 0.00 43.72 4.75
65 66 3.385755 ACAAGGGCAATGATGATTTAGCC 59.614 43.478 0.00 0.00 41.29 3.93
66 67 4.340381 AGACAAGGGCAATGATGATTTAGC 59.660 41.667 0.00 0.00 0.00 3.09
67 68 5.277683 CGAGACAAGGGCAATGATGATTTAG 60.278 44.000 0.00 0.00 0.00 1.85
68 69 4.576053 CGAGACAAGGGCAATGATGATTTA 59.424 41.667 0.00 0.00 0.00 1.40
69 70 3.379372 CGAGACAAGGGCAATGATGATTT 59.621 43.478 0.00 0.00 0.00 2.17
70 71 2.947652 CGAGACAAGGGCAATGATGATT 59.052 45.455 0.00 0.00 0.00 2.57
71 72 2.569059 CGAGACAAGGGCAATGATGAT 58.431 47.619 0.00 0.00 0.00 2.45
72 73 2.013563 GCGAGACAAGGGCAATGATGA 61.014 52.381 0.00 0.00 0.00 2.92
73 74 0.379669 GCGAGACAAGGGCAATGATG 59.620 55.000 0.00 0.00 0.00 3.07
74 75 0.254178 AGCGAGACAAGGGCAATGAT 59.746 50.000 0.00 0.00 0.00 2.45
75 76 0.674581 CAGCGAGACAAGGGCAATGA 60.675 55.000 0.00 0.00 0.00 2.57
76 77 1.798735 CAGCGAGACAAGGGCAATG 59.201 57.895 0.00 0.00 0.00 2.82
77 78 2.042831 GCAGCGAGACAAGGGCAAT 61.043 57.895 0.00 0.00 0.00 3.56
78 79 2.669569 GCAGCGAGACAAGGGCAA 60.670 61.111 0.00 0.00 0.00 4.52
79 80 3.630013 AGCAGCGAGACAAGGGCA 61.630 61.111 0.00 0.00 0.00 5.36
80 81 3.123620 CAGCAGCGAGACAAGGGC 61.124 66.667 0.00 0.00 0.00 5.19
81 82 1.294659 GAACAGCAGCGAGACAAGGG 61.295 60.000 0.00 0.00 0.00 3.95
82 83 1.621301 CGAACAGCAGCGAGACAAGG 61.621 60.000 0.00 0.00 0.00 3.61
83 84 0.664466 TCGAACAGCAGCGAGACAAG 60.664 55.000 0.00 0.00 32.13 3.16
84 85 0.249280 TTCGAACAGCAGCGAGACAA 60.249 50.000 0.00 0.00 37.85 3.18
85 86 0.038251 ATTCGAACAGCAGCGAGACA 60.038 50.000 0.00 0.00 37.85 3.41
86 87 0.642800 GATTCGAACAGCAGCGAGAC 59.357 55.000 0.00 0.00 37.85 3.36
87 88 0.798389 CGATTCGAACAGCAGCGAGA 60.798 55.000 0.00 0.00 37.85 4.04
88 89 1.627943 CGATTCGAACAGCAGCGAG 59.372 57.895 0.00 0.00 37.85 5.03
89 90 2.444624 GCGATTCGAACAGCAGCGA 61.445 57.895 18.28 0.00 34.32 4.93
90 91 2.020559 GCGATTCGAACAGCAGCG 59.979 61.111 18.28 4.72 0.00 5.18
91 92 2.020559 CGCGATTCGAACAGCAGC 59.979 61.111 21.49 12.62 41.67 5.25
92 93 1.057822 CACGCGATTCGAACAGCAG 59.942 57.895 15.93 16.83 41.67 4.24
93 94 1.344226 CTCACGCGATTCGAACAGCA 61.344 55.000 15.93 6.34 41.67 4.41
94 95 1.341802 CTCACGCGATTCGAACAGC 59.658 57.895 15.93 14.53 41.67 4.40
95 96 1.073216 AGCTCACGCGATTCGAACAG 61.073 55.000 15.93 0.00 42.32 3.16
96 97 1.071019 GAGCTCACGCGATTCGAACA 61.071 55.000 15.93 0.00 42.32 3.18
97 98 1.626388 GAGCTCACGCGATTCGAAC 59.374 57.895 15.93 0.00 42.32 3.95
98 99 1.516386 GGAGCTCACGCGATTCGAA 60.516 57.895 15.93 0.00 42.32 3.71
99 100 2.102357 GGAGCTCACGCGATTCGA 59.898 61.111 15.93 2.27 42.32 3.71
100 101 2.202610 TGGAGCTCACGCGATTCG 60.203 61.111 15.93 0.62 42.32 3.34
101 102 2.520904 GCTGGAGCTCACGCGATTC 61.521 63.158 15.93 2.15 42.32 2.52
102 103 2.510238 GCTGGAGCTCACGCGATT 60.510 61.111 15.93 0.00 42.32 3.34
103 104 4.521062 GGCTGGAGCTCACGCGAT 62.521 66.667 15.93 0.00 42.32 4.58
106 107 4.828925 GGAGGCTGGAGCTCACGC 62.829 72.222 17.19 16.34 41.70 5.34
107 108 2.729479 ATGGAGGCTGGAGCTCACG 61.729 63.158 17.19 6.59 41.70 4.35
108 109 1.153208 CATGGAGGCTGGAGCTCAC 60.153 63.158 17.19 5.63 41.70 3.51
109 110 2.372890 CCATGGAGGCTGGAGCTCA 61.373 63.158 17.19 0.61 41.70 4.26
110 111 1.050988 TACCATGGAGGCTGGAGCTC 61.051 60.000 21.47 4.71 43.14 4.09
111 112 0.621571 TTACCATGGAGGCTGGAGCT 60.622 55.000 21.47 0.00 43.14 4.09
112 113 0.475906 ATTACCATGGAGGCTGGAGC 59.524 55.000 21.47 0.00 43.14 4.70
113 114 2.267174 CATTACCATGGAGGCTGGAG 57.733 55.000 21.47 0.00 43.14 3.86
123 124 6.177610 AGTGTTACTACCAACCATTACCATG 58.822 40.000 0.00 0.00 0.00 3.66
124 125 6.013206 TGAGTGTTACTACCAACCATTACCAT 60.013 38.462 0.00 0.00 0.00 3.55
125 126 5.307456 TGAGTGTTACTACCAACCATTACCA 59.693 40.000 0.00 0.00 0.00 3.25
126 127 5.797051 TGAGTGTTACTACCAACCATTACC 58.203 41.667 0.00 0.00 0.00 2.85
127 128 6.589139 GTCTGAGTGTTACTACCAACCATTAC 59.411 42.308 0.00 0.00 0.00 1.89
128 129 6.268158 TGTCTGAGTGTTACTACCAACCATTA 59.732 38.462 0.00 0.00 0.00 1.90
129 130 5.071250 TGTCTGAGTGTTACTACCAACCATT 59.929 40.000 0.00 0.00 0.00 3.16
130 131 4.591498 TGTCTGAGTGTTACTACCAACCAT 59.409 41.667 0.00 0.00 0.00 3.55
131 132 3.962063 TGTCTGAGTGTTACTACCAACCA 59.038 43.478 0.00 0.00 0.00 3.67
132 133 4.595762 TGTCTGAGTGTTACTACCAACC 57.404 45.455 0.00 0.00 0.00 3.77
133 134 5.779922 TGATGTCTGAGTGTTACTACCAAC 58.220 41.667 0.00 0.00 0.00 3.77
134 135 5.538813 ACTGATGTCTGAGTGTTACTACCAA 59.461 40.000 0.00 0.00 0.00 3.67
135 136 5.048013 CACTGATGTCTGAGTGTTACTACCA 60.048 44.000 0.00 0.00 35.78 3.25
136 137 5.403246 CACTGATGTCTGAGTGTTACTACC 58.597 45.833 0.00 0.00 35.78 3.18
137 138 4.859798 GCACTGATGTCTGAGTGTTACTAC 59.140 45.833 0.00 0.00 41.47 2.73
138 139 4.522789 TGCACTGATGTCTGAGTGTTACTA 59.477 41.667 0.00 0.00 41.47 1.82
139 140 3.321968 TGCACTGATGTCTGAGTGTTACT 59.678 43.478 0.00 0.00 41.47 2.24
140 141 3.653344 TGCACTGATGTCTGAGTGTTAC 58.347 45.455 0.00 0.00 41.47 2.50
141 142 4.021192 TGATGCACTGATGTCTGAGTGTTA 60.021 41.667 0.00 0.00 41.47 2.41
142 143 2.916702 TGCACTGATGTCTGAGTGTT 57.083 45.000 0.00 0.00 41.47 3.32
143 144 2.301009 TGATGCACTGATGTCTGAGTGT 59.699 45.455 0.00 0.00 41.47 3.55
144 145 2.671888 GTGATGCACTGATGTCTGAGTG 59.328 50.000 0.00 0.00 42.18 3.51
145 146 2.566279 AGTGATGCACTGATGTCTGAGT 59.434 45.455 0.00 0.00 43.63 3.41
146 147 3.248495 AGTGATGCACTGATGTCTGAG 57.752 47.619 0.00 0.00 43.63 3.35
147 148 5.105228 TGAATAGTGATGCACTGATGTCTGA 60.105 40.000 10.15 0.00 45.01 3.27
148 149 5.006455 GTGAATAGTGATGCACTGATGTCTG 59.994 44.000 10.15 0.00 45.01 3.51
149 150 5.114780 GTGAATAGTGATGCACTGATGTCT 58.885 41.667 10.15 0.00 45.01 3.41
150 151 5.401033 GTGAATAGTGATGCACTGATGTC 57.599 43.478 10.15 3.38 45.01 3.06
157 158 4.032217 CGTTCTGAGTGAATAGTGATGCAC 59.968 45.833 0.00 0.00 41.51 4.57
158 159 4.082245 TCGTTCTGAGTGAATAGTGATGCA 60.082 41.667 0.00 0.00 36.99 3.96
159 160 4.424626 TCGTTCTGAGTGAATAGTGATGC 58.575 43.478 0.00 0.00 36.99 3.91
160 161 5.884771 TCTCGTTCTGAGTGAATAGTGATG 58.115 41.667 0.00 0.00 45.46 3.07
161 162 6.707440 ATCTCGTTCTGAGTGAATAGTGAT 57.293 37.500 0.00 0.00 45.46 3.06
162 163 7.553044 TCTTATCTCGTTCTGAGTGAATAGTGA 59.447 37.037 0.00 0.00 45.46 3.41
163 164 7.698628 TCTTATCTCGTTCTGAGTGAATAGTG 58.301 38.462 0.00 0.00 45.46 2.74
164 165 7.468084 GCTCTTATCTCGTTCTGAGTGAATAGT 60.468 40.741 0.00 0.00 45.46 2.12
165 166 6.855914 GCTCTTATCTCGTTCTGAGTGAATAG 59.144 42.308 0.00 0.00 45.46 1.73
166 167 6.318900 TGCTCTTATCTCGTTCTGAGTGAATA 59.681 38.462 0.00 0.00 45.46 1.75
167 168 5.126222 TGCTCTTATCTCGTTCTGAGTGAAT 59.874 40.000 0.00 0.00 45.46 2.57
168 169 4.459337 TGCTCTTATCTCGTTCTGAGTGAA 59.541 41.667 0.00 0.00 45.46 3.18
169 170 4.010349 TGCTCTTATCTCGTTCTGAGTGA 58.990 43.478 0.00 0.00 45.46 3.41
170 171 4.101942 GTGCTCTTATCTCGTTCTGAGTG 58.898 47.826 0.00 0.00 45.46 3.51
171 172 3.759086 TGTGCTCTTATCTCGTTCTGAGT 59.241 43.478 0.00 0.00 45.46 3.41
172 173 4.101942 GTGTGCTCTTATCTCGTTCTGAG 58.898 47.826 0.00 0.00 46.72 3.35
173 174 3.506067 TGTGTGCTCTTATCTCGTTCTGA 59.494 43.478 0.00 0.00 0.00 3.27
174 175 3.610242 GTGTGTGCTCTTATCTCGTTCTG 59.390 47.826 0.00 0.00 0.00 3.02
175 176 3.508012 AGTGTGTGCTCTTATCTCGTTCT 59.492 43.478 0.00 0.00 0.00 3.01
176 177 3.839293 AGTGTGTGCTCTTATCTCGTTC 58.161 45.455 0.00 0.00 0.00 3.95
177 178 3.944055 AGTGTGTGCTCTTATCTCGTT 57.056 42.857 0.00 0.00 0.00 3.85
178 179 3.944055 AAGTGTGTGCTCTTATCTCGT 57.056 42.857 0.00 0.00 0.00 4.18
179 180 4.686091 TGAAAAGTGTGTGCTCTTATCTCG 59.314 41.667 0.00 0.00 0.00 4.04
180 181 5.928839 TCTGAAAAGTGTGTGCTCTTATCTC 59.071 40.000 0.00 0.00 0.00 2.75
181 182 5.858381 TCTGAAAAGTGTGTGCTCTTATCT 58.142 37.500 0.00 0.00 0.00 1.98
182 183 6.734104 ATCTGAAAAGTGTGTGCTCTTATC 57.266 37.500 0.00 0.00 0.00 1.75
183 184 7.661437 TGTAATCTGAAAAGTGTGTGCTCTTAT 59.339 33.333 0.00 0.00 0.00 1.73
184 185 6.989759 TGTAATCTGAAAAGTGTGTGCTCTTA 59.010 34.615 0.00 0.00 0.00 2.10
185 186 5.822519 TGTAATCTGAAAAGTGTGTGCTCTT 59.177 36.000 0.00 0.00 0.00 2.85
186 187 5.368145 TGTAATCTGAAAAGTGTGTGCTCT 58.632 37.500 0.00 0.00 0.00 4.09
187 188 5.673337 TGTAATCTGAAAAGTGTGTGCTC 57.327 39.130 0.00 0.00 0.00 4.26
188 189 5.590259 AGTTGTAATCTGAAAAGTGTGTGCT 59.410 36.000 0.00 0.00 0.00 4.40
189 190 5.821204 AGTTGTAATCTGAAAAGTGTGTGC 58.179 37.500 0.00 0.00 0.00 4.57
190 191 7.128331 CAGAGTTGTAATCTGAAAAGTGTGTG 58.872 38.462 0.00 0.00 45.80 3.82
191 192 6.260936 CCAGAGTTGTAATCTGAAAAGTGTGT 59.739 38.462 5.77 0.00 45.80 3.72
192 193 6.293626 CCCAGAGTTGTAATCTGAAAAGTGTG 60.294 42.308 5.77 0.00 45.80 3.82
193 194 5.765182 CCCAGAGTTGTAATCTGAAAAGTGT 59.235 40.000 5.77 0.00 45.80 3.55
194 195 5.182001 CCCCAGAGTTGTAATCTGAAAAGTG 59.818 44.000 5.77 0.00 45.80 3.16
195 196 5.316987 CCCCAGAGTTGTAATCTGAAAAGT 58.683 41.667 5.77 0.00 45.80 2.66
196 197 4.156739 GCCCCAGAGTTGTAATCTGAAAAG 59.843 45.833 5.77 0.00 45.80 2.27
197 198 4.079253 GCCCCAGAGTTGTAATCTGAAAA 58.921 43.478 5.77 0.00 45.80 2.29
198 199 3.330701 AGCCCCAGAGTTGTAATCTGAAA 59.669 43.478 5.77 0.00 45.80 2.69
199 200 2.912956 AGCCCCAGAGTTGTAATCTGAA 59.087 45.455 5.77 0.00 45.80 3.02
200 201 2.237143 CAGCCCCAGAGTTGTAATCTGA 59.763 50.000 5.77 0.00 45.80 3.27
201 202 2.636830 CAGCCCCAGAGTTGTAATCTG 58.363 52.381 0.00 0.00 43.15 2.90
202 203 1.065126 GCAGCCCCAGAGTTGTAATCT 60.065 52.381 0.00 0.00 0.00 2.40
203 204 1.383523 GCAGCCCCAGAGTTGTAATC 58.616 55.000 0.00 0.00 0.00 1.75
204 205 0.034089 GGCAGCCCCAGAGTTGTAAT 60.034 55.000 0.00 0.00 0.00 1.89
205 206 1.378762 GGCAGCCCCAGAGTTGTAA 59.621 57.895 0.00 0.00 0.00 2.41
206 207 1.845664 TGGCAGCCCCAGAGTTGTA 60.846 57.895 9.64 0.00 39.18 2.41
207 208 3.177884 TGGCAGCCCCAGAGTTGT 61.178 61.111 9.64 0.00 39.18 3.32
222 223 0.101040 CACTATTGCCGTTGCCATGG 59.899 55.000 7.63 7.63 36.33 3.66
223 224 0.101040 CCACTATTGCCGTTGCCATG 59.899 55.000 0.00 0.00 36.33 3.66
224 225 1.666209 GCCACTATTGCCGTTGCCAT 61.666 55.000 0.00 0.00 36.33 4.40
225 226 2.339556 GCCACTATTGCCGTTGCCA 61.340 57.895 0.00 0.00 36.33 4.92
226 227 2.489751 GCCACTATTGCCGTTGCC 59.510 61.111 0.00 0.00 36.33 4.52
227 228 2.489751 GGCCACTATTGCCGTTGC 59.510 61.111 0.00 0.00 39.48 4.17
233 234 3.625764 TCGAATAAACTGGCCACTATTGC 59.374 43.478 0.00 0.28 0.00 3.56
234 235 5.811399 TTCGAATAAACTGGCCACTATTG 57.189 39.130 0.00 0.00 0.00 1.90
235 236 7.404671 AATTTCGAATAAACTGGCCACTATT 57.595 32.000 0.00 5.47 0.00 1.73
241 242 4.494484 AGCAAATTTCGAATAAACTGGCC 58.506 39.130 0.00 0.00 0.00 5.36
244 245 8.071122 TCCAAAAGCAAATTTCGAATAAACTG 57.929 30.769 0.00 0.00 0.00 3.16
284 285 3.723260 TGAATTTTTCAAAACCGGCCTC 58.277 40.909 0.00 0.00 36.59 4.70
355 358 7.442364 GTGTTATGCCTTCATGTATGTCTGTAT 59.558 37.037 0.00 0.00 34.22 2.29
398 401 4.458642 TCATTTCAACGCATTTCATCCTGA 59.541 37.500 0.00 0.00 0.00 3.86
404 407 2.352617 GCCCTCATTTCAACGCATTTCA 60.353 45.455 0.00 0.00 0.00 2.69
410 413 0.109597 CACAGCCCTCATTTCAACGC 60.110 55.000 0.00 0.00 0.00 4.84
411 414 0.109597 GCACAGCCCTCATTTCAACG 60.110 55.000 0.00 0.00 0.00 4.10
439 442 9.822332 ATCATGTGTTGAAAAGCCACAGATTGG 62.822 40.741 0.00 0.00 42.74 3.16
440 443 4.044336 TGTGTTGAAAAGCCACAGATTG 57.956 40.909 0.00 0.00 34.37 2.67
446 449 5.376854 AGTATCATGTGTTGAAAAGCCAC 57.623 39.130 0.00 0.00 38.03 5.01
484 487 6.601741 TGTGCAAAAGGAACAATTTCATTC 57.398 33.333 0.00 0.00 34.67 2.67
485 488 6.998968 TTGTGCAAAAGGAACAATTTCATT 57.001 29.167 0.00 0.00 40.75 2.57
491 494 5.609423 TGCTATTTGTGCAAAAGGAACAAT 58.391 33.333 1.26 0.00 40.75 2.71
498 501 6.384224 TCTTGAGATGCTATTTGTGCAAAAG 58.616 36.000 1.26 2.93 44.01 2.27
620 885 1.997928 GCATTTTGGAGCTCGGCCTC 61.998 60.000 7.83 0.00 0.00 4.70
622 887 2.491621 GCATTTTGGAGCTCGGCC 59.508 61.111 7.83 0.00 0.00 6.13
627 892 1.168714 GAGAACGGCATTTTGGAGCT 58.831 50.000 0.00 0.00 0.00 4.09
628 893 0.171231 GGAGAACGGCATTTTGGAGC 59.829 55.000 0.00 0.00 0.00 4.70
629 894 1.470098 CTGGAGAACGGCATTTTGGAG 59.530 52.381 0.00 0.00 0.00 3.86
630 895 1.202879 ACTGGAGAACGGCATTTTGGA 60.203 47.619 0.00 0.00 0.00 3.53
631 896 1.247567 ACTGGAGAACGGCATTTTGG 58.752 50.000 0.00 0.00 0.00 3.28
632 897 3.369546 AAACTGGAGAACGGCATTTTG 57.630 42.857 0.00 0.00 0.00 2.44
633 898 5.476945 AGAATAAACTGGAGAACGGCATTTT 59.523 36.000 0.00 0.00 0.00 1.82
634 899 5.010282 AGAATAAACTGGAGAACGGCATTT 58.990 37.500 0.00 0.00 0.00 2.32
635 900 4.396166 CAGAATAAACTGGAGAACGGCATT 59.604 41.667 0.00 0.00 34.64 3.56
636 901 3.941483 CAGAATAAACTGGAGAACGGCAT 59.059 43.478 0.00 0.00 34.64 4.40
637 902 3.244422 ACAGAATAAACTGGAGAACGGCA 60.244 43.478 0.00 0.00 41.59 5.69
638 903 3.335579 ACAGAATAAACTGGAGAACGGC 58.664 45.455 0.00 0.00 41.59 5.68
639 904 7.611213 ATTTACAGAATAAACTGGAGAACGG 57.389 36.000 0.00 0.00 41.59 4.44
678 943 5.997746 AGGCATATAAACGTGATGCATTAGT 59.002 36.000 20.06 0.00 46.29 2.24
679 944 6.486253 AGGCATATAAACGTGATGCATTAG 57.514 37.500 20.06 0.00 46.29 1.73
688 953 5.163992 CGCTGGTTATAGGCATATAAACGTG 60.164 44.000 18.43 15.45 42.29 4.49
689 954 4.927425 CGCTGGTTATAGGCATATAAACGT 59.073 41.667 18.43 0.00 42.29 3.99
695 960 3.323691 TGTGACGCTGGTTATAGGCATAT 59.676 43.478 0.00 0.00 0.00 1.78
712 977 2.420022 GCACACATATGGTTCCTGTGAC 59.580 50.000 21.30 12.04 42.20 3.67
717 982 0.253044 AGCGCACACATATGGTTCCT 59.747 50.000 11.47 0.00 0.00 3.36
750 1015 7.097834 AGGATTAAAGTAGACTGTGTGCTAAC 58.902 38.462 0.00 0.00 0.00 2.34
757 1022 7.439655 GGATGCTAAGGATTAAAGTAGACTGTG 59.560 40.741 0.00 0.00 0.00 3.66
758 1023 7.125811 TGGATGCTAAGGATTAAAGTAGACTGT 59.874 37.037 0.00 0.00 0.00 3.55
766 1031 7.814264 ATGAAGTGGATGCTAAGGATTAAAG 57.186 36.000 0.00 0.00 0.00 1.85
773 1042 7.222872 AGAAGAATATGAAGTGGATGCTAAGG 58.777 38.462 0.00 0.00 0.00 2.69
821 1093 5.227238 CAGCTTCTCTGCGACAAATTTAT 57.773 39.130 0.00 0.00 35.78 1.40
823 1095 3.549299 CAGCTTCTCTGCGACAAATTT 57.451 42.857 0.00 0.00 35.78 1.82
853 1125 1.308998 CAACAGCCGTCTCTTGGTTT 58.691 50.000 0.00 0.00 0.00 3.27
857 1129 0.583438 CACACAACAGCCGTCTCTTG 59.417 55.000 0.00 0.00 0.00 3.02
862 1134 0.248054 CACAACACACAACAGCCGTC 60.248 55.000 0.00 0.00 0.00 4.79
864 1136 0.248054 GACACAACACACAACAGCCG 60.248 55.000 0.00 0.00 0.00 5.52
865 1137 0.100503 GGACACAACACACAACAGCC 59.899 55.000 0.00 0.00 0.00 4.85
880 1152 2.981302 CCAGACATGGCGAGGACA 59.019 61.111 7.25 0.00 40.52 4.02
891 1163 1.073763 CCCAACCTTGATGTCCAGACA 59.926 52.381 2.42 2.42 46.44 3.41
916 1188 2.646930 TGAAGCAGAACATATGGCAGG 58.353 47.619 7.80 0.00 0.00 4.85
919 1191 3.561310 TCGAATGAAGCAGAACATATGGC 59.439 43.478 7.80 0.38 0.00 4.40
923 1195 6.545508 CAACAATCGAATGAAGCAGAACATA 58.454 36.000 7.64 0.00 0.00 2.29
928 1200 3.076621 AGCAACAATCGAATGAAGCAGA 58.923 40.909 18.77 0.00 0.00 4.26
967 1239 1.003233 AGCGAAGGCAAGAAGGTCC 60.003 57.895 0.00 0.00 43.41 4.46
971 1243 1.968017 TGGCAGCGAAGGCAAGAAG 60.968 57.895 1.35 0.00 41.47 2.85
974 1246 3.741476 GGTGGCAGCGAAGGCAAG 61.741 66.667 0.00 0.00 46.19 4.01
1007 1279 0.984961 TTGGAGGAGGAGAGGGCATG 60.985 60.000 0.00 0.00 0.00 4.06
1041 1359 2.360801 GCCACCAAACTTTGCAGAGTAA 59.639 45.455 10.74 0.00 0.00 2.24
1042 1360 1.953686 GCCACCAAACTTTGCAGAGTA 59.046 47.619 10.74 0.00 0.00 2.59
1043 1361 0.746659 GCCACCAAACTTTGCAGAGT 59.253 50.000 3.61 3.61 0.00 3.24
1048 1366 3.684305 GGATATTTGCCACCAAACTTTGC 59.316 43.478 0.00 0.00 43.20 3.68
1061 1391 3.206150 AGGACACGACATGGATATTTGC 58.794 45.455 0.00 0.00 0.00 3.68
1144 1474 3.388350 GGACTCTGGGGGTCATTACTTAG 59.612 52.174 0.00 0.00 35.61 2.18
1167 1497 3.578688 CACAAAGCAGAAATTACCCAGC 58.421 45.455 0.00 0.00 0.00 4.85
1175 1505 1.708341 AGCACCCACAAAGCAGAAAT 58.292 45.000 0.00 0.00 0.00 2.17
1295 1625 1.726265 CCGTAGTAGACCTCGGTGC 59.274 63.158 0.00 0.00 38.45 5.01
1366 1696 2.350522 CCAGAAGAAACTGTGGGATCG 58.649 52.381 0.00 0.00 36.30 3.69
1388 1718 6.299805 TCAACCAAGAATGACTAGCAGTAT 57.700 37.500 0.00 0.00 0.00 2.12
1390 1720 4.564406 CCTCAACCAAGAATGACTAGCAGT 60.564 45.833 0.00 0.00 0.00 4.40
1391 1721 3.937706 CCTCAACCAAGAATGACTAGCAG 59.062 47.826 0.00 0.00 0.00 4.24
1794 2124 0.737715 CTCGGTTGCTCTTTCCTCCG 60.738 60.000 0.00 0.00 39.40 4.63
1934 2264 1.225704 GGAGAGAACATGCTGGGGG 59.774 63.158 0.00 0.00 0.00 5.40
1952 2282 1.135721 TGCACATCCATCAGAGAGACG 59.864 52.381 0.00 0.00 0.00 4.18
1975 2305 9.289782 GAGGGAGTAATAGTCATGCATAAAAAT 57.710 33.333 0.00 0.00 0.00 1.82
1988 2318 7.909485 TTTTCTTATCGGAGGGAGTAATAGT 57.091 36.000 0.00 0.00 0.00 2.12
1993 2323 9.818270 TCTTATATTTTCTTATCGGAGGGAGTA 57.182 33.333 0.00 0.00 0.00 2.59
1994 2324 8.722622 TCTTATATTTTCTTATCGGAGGGAGT 57.277 34.615 0.00 0.00 0.00 3.85
1995 2325 7.762159 GCTCTTATATTTTCTTATCGGAGGGAG 59.238 40.741 0.00 0.00 0.00 4.30
1996 2326 7.577046 CGCTCTTATATTTTCTTATCGGAGGGA 60.577 40.741 0.00 0.00 32.05 4.20
1997 2327 6.531948 CGCTCTTATATTTTCTTATCGGAGGG 59.468 42.308 0.00 0.00 0.00 4.30
1998 2328 7.091443 ACGCTCTTATATTTTCTTATCGGAGG 58.909 38.462 0.00 0.00 0.00 4.30
1999 2329 8.522178 AACGCTCTTATATTTTCTTATCGGAG 57.478 34.615 0.00 0.00 0.00 4.63
2000 2330 8.882415 AAACGCTCTTATATTTTCTTATCGGA 57.118 30.769 0.00 0.00 0.00 4.55
2015 2345 9.339850 AGATTAGTAGTGATCTAAACGCTCTTA 57.660 33.333 3.08 0.00 31.09 2.10
2016 2346 8.228035 AGATTAGTAGTGATCTAAACGCTCTT 57.772 34.615 3.08 0.00 31.09 2.85
2017 2347 7.811117 AGATTAGTAGTGATCTAAACGCTCT 57.189 36.000 3.08 0.00 31.09 4.09
2018 2348 9.947669 TTTAGATTAGTAGTGATCTAAACGCTC 57.052 33.333 23.66 0.00 44.07 5.03
2023 2353 9.947669 GAGCGTTTAGATTAGTAGTGATCTAAA 57.052 33.333 23.66 23.66 45.48 1.85
2024 2354 9.339850 AGAGCGTTTAGATTAGTAGTGATCTAA 57.660 33.333 16.82 16.82 40.97 2.10
2025 2355 8.905660 AGAGCGTTTAGATTAGTAGTGATCTA 57.094 34.615 7.75 7.75 34.60 1.98
2026 2356 7.811117 AGAGCGTTTAGATTAGTAGTGATCT 57.189 36.000 9.58 9.58 36.61 2.75
2027 2357 9.384682 GTAAGAGCGTTTAGATTAGTAGTGATC 57.615 37.037 0.00 0.00 0.00 2.92
2028 2358 8.900781 TGTAAGAGCGTTTAGATTAGTAGTGAT 58.099 33.333 0.00 0.00 0.00 3.06
2029 2359 8.272545 TGTAAGAGCGTTTAGATTAGTAGTGA 57.727 34.615 0.00 0.00 0.00 3.41
2030 2360 9.517609 AATGTAAGAGCGTTTAGATTAGTAGTG 57.482 33.333 4.56 0.00 28.24 2.74
2034 2364 9.654663 AAGAAATGTAAGAGCGTTTAGATTAGT 57.345 29.630 6.22 0.00 29.47 2.24
2038 2368 8.592998 CGTAAAGAAATGTAAGAGCGTTTAGAT 58.407 33.333 0.00 0.00 0.00 1.98
2039 2369 7.062605 CCGTAAAGAAATGTAAGAGCGTTTAGA 59.937 37.037 0.00 0.00 0.00 2.10
2040 2370 7.062605 TCCGTAAAGAAATGTAAGAGCGTTTAG 59.937 37.037 0.00 0.00 0.00 1.85
2041 2371 6.867816 TCCGTAAAGAAATGTAAGAGCGTTTA 59.132 34.615 0.00 0.00 0.00 2.01
2042 2372 5.697633 TCCGTAAAGAAATGTAAGAGCGTTT 59.302 36.000 0.00 0.00 0.00 3.60
2043 2373 5.232463 TCCGTAAAGAAATGTAAGAGCGTT 58.768 37.500 0.00 0.00 0.00 4.84
2044 2374 4.813027 TCCGTAAAGAAATGTAAGAGCGT 58.187 39.130 0.00 0.00 0.00 5.07
2045 2375 4.267928 CCTCCGTAAAGAAATGTAAGAGCG 59.732 45.833 0.00 0.00 0.00 5.03
2046 2376 4.571176 CCCTCCGTAAAGAAATGTAAGAGC 59.429 45.833 0.00 0.00 0.00 4.09
2047 2377 5.974108 TCCCTCCGTAAAGAAATGTAAGAG 58.026 41.667 0.00 0.00 0.00 2.85
2048 2378 5.482878 ACTCCCTCCGTAAAGAAATGTAAGA 59.517 40.000 0.00 0.00 0.00 2.10
2049 2379 5.731591 ACTCCCTCCGTAAAGAAATGTAAG 58.268 41.667 0.00 0.00 0.00 2.34
2050 2380 5.750352 ACTCCCTCCGTAAAGAAATGTAA 57.250 39.130 0.00 0.00 0.00 2.41
2051 2381 7.427989 AATACTCCCTCCGTAAAGAAATGTA 57.572 36.000 0.00 0.00 0.00 2.29
2052 2382 5.952347 ATACTCCCTCCGTAAAGAAATGT 57.048 39.130 0.00 0.00 0.00 2.71
2053 2383 6.458342 GCAAATACTCCCTCCGTAAAGAAATG 60.458 42.308 0.00 0.00 0.00 2.32
2054 2384 5.589050 GCAAATACTCCCTCCGTAAAGAAAT 59.411 40.000 0.00 0.00 0.00 2.17
2055 2385 4.939439 GCAAATACTCCCTCCGTAAAGAAA 59.061 41.667 0.00 0.00 0.00 2.52
2056 2386 4.224370 AGCAAATACTCCCTCCGTAAAGAA 59.776 41.667 0.00 0.00 0.00 2.52
2057 2387 3.773119 AGCAAATACTCCCTCCGTAAAGA 59.227 43.478 0.00 0.00 0.00 2.52
2058 2388 4.138487 AGCAAATACTCCCTCCGTAAAG 57.862 45.455 0.00 0.00 0.00 1.85
2059 2389 4.442472 GCTAGCAAATACTCCCTCCGTAAA 60.442 45.833 10.63 0.00 0.00 2.01
2060 2390 3.069158 GCTAGCAAATACTCCCTCCGTAA 59.931 47.826 10.63 0.00 0.00 3.18
2061 2391 2.626743 GCTAGCAAATACTCCCTCCGTA 59.373 50.000 10.63 0.00 0.00 4.02
2062 2392 1.413077 GCTAGCAAATACTCCCTCCGT 59.587 52.381 10.63 0.00 0.00 4.69
2063 2393 1.689273 AGCTAGCAAATACTCCCTCCG 59.311 52.381 18.83 0.00 0.00 4.63
2064 2394 2.700897 TCAGCTAGCAAATACTCCCTCC 59.299 50.000 18.83 0.00 0.00 4.30
2065 2395 4.376146 CTTCAGCTAGCAAATACTCCCTC 58.624 47.826 18.83 0.00 0.00 4.30
2066 2396 3.432890 GCTTCAGCTAGCAAATACTCCCT 60.433 47.826 18.83 0.00 40.89 4.20
2067 2397 2.875317 GCTTCAGCTAGCAAATACTCCC 59.125 50.000 18.83 0.00 40.89 4.30
2135 2465 7.444299 TCCTATCGATGATCACATGATTTTGA 58.556 34.615 8.54 0.00 36.82 2.69
2151 2481 2.800544 CGACGGCAAATTTCCTATCGAT 59.199 45.455 2.16 2.16 34.05 3.59
2152 2482 2.198406 CGACGGCAAATTTCCTATCGA 58.802 47.619 16.37 0.00 34.05 3.59
2153 2483 1.931172 ACGACGGCAAATTTCCTATCG 59.069 47.619 18.03 18.03 36.53 2.92
2156 2486 3.929094 AGTAACGACGGCAAATTTCCTA 58.071 40.909 0.00 0.00 0.00 2.94
2167 2497 1.715519 CACGTACCAAAGTAACGACGG 59.284 52.381 0.00 0.00 31.63 4.79
2171 2501 4.376615 CCAATCACACGTACCAAAGTAACG 60.377 45.833 0.00 0.00 32.67 3.18
2176 2506 3.399330 ACTCCAATCACACGTACCAAAG 58.601 45.455 0.00 0.00 0.00 2.77
2182 2512 5.831525 AGATACCATACTCCAATCACACGTA 59.168 40.000 0.00 0.00 0.00 3.57
2184 2514 5.201713 AGATACCATACTCCAATCACACG 57.798 43.478 0.00 0.00 0.00 4.49
2185 2515 6.349300 ACAAGATACCATACTCCAATCACAC 58.651 40.000 0.00 0.00 0.00 3.82
2186 2516 6.560003 ACAAGATACCATACTCCAATCACA 57.440 37.500 0.00 0.00 0.00 3.58
2187 2517 7.727181 AGTACAAGATACCATACTCCAATCAC 58.273 38.462 0.00 0.00 0.00 3.06
2189 2519 7.952671 TGAGTACAAGATACCATACTCCAATC 58.047 38.462 7.58 0.00 41.84 2.67
2190 2520 7.565398 ACTGAGTACAAGATACCATACTCCAAT 59.435 37.037 7.58 0.00 41.84 3.16
2240 2580 4.083431 GCATGCATCAGATCATAGTCCAAC 60.083 45.833 14.21 0.00 0.00 3.77
2243 2583 3.008330 GGCATGCATCAGATCATAGTCC 58.992 50.000 21.36 0.00 0.00 3.85
2263 2603 3.423539 TTGGGACAGAGAAACAGATGG 57.576 47.619 0.00 0.00 42.39 3.51
2267 2607 2.880890 CAGGTTTGGGACAGAGAAACAG 59.119 50.000 0.00 0.00 42.39 3.16
2273 2613 1.878102 CGGTTCAGGTTTGGGACAGAG 60.878 57.143 0.00 0.00 42.39 3.35
2341 2682 8.928733 ACATGTGAAATACAAAGATGAAAATGC 58.071 29.630 0.00 0.00 43.77 3.56
2351 2692 9.277565 GTATGTAAGCACATGTGAAATACAAAG 57.722 33.333 29.80 0.00 45.17 2.77
2422 2763 2.049475 GAGCAGATACTCCGCGTCGT 62.049 60.000 4.92 3.81 0.00 4.34
2423 2764 1.369448 GAGCAGATACTCCGCGTCG 60.369 63.158 4.92 0.00 0.00 5.12
2496 2863 9.581099 TGAATGTGATCTCATGATGAAAATTTG 57.419 29.630 10.87 0.00 32.19 2.32
2507 2874 4.023107 GCCTTCCATGAATGTGATCTCATG 60.023 45.833 10.87 12.22 45.64 3.07
2522 2889 8.860780 TTTATTTATTTTTGCAAGCCTTCCAT 57.139 26.923 0.00 0.00 0.00 3.41
2631 3000 9.823098 GTGTTTGCTAATATTCATCATGAGATC 57.177 33.333 0.09 0.00 30.20 2.75
2632 3001 9.570468 AGTGTTTGCTAATATTCATCATGAGAT 57.430 29.630 0.09 0.00 33.87 2.75
2645 3014 5.183228 GCAGGGAGTAAGTGTTTGCTAATA 58.817 41.667 0.00 0.00 28.70 0.98
2692 5842 8.008513 TCCTATGTAGTTTGTAGTGGAATCTC 57.991 38.462 0.00 0.00 0.00 2.75
2795 5945 9.021807 TCTACTCCCTCCATTCGTAAATATAAG 57.978 37.037 0.00 0.00 0.00 1.73
2809 5959 4.425772 TGAGAAATGTTCTACTCCCTCCA 58.574 43.478 0.00 0.00 40.87 3.86
2810 5960 5.422214 TTGAGAAATGTTCTACTCCCTCC 57.578 43.478 0.00 0.00 40.87 4.30
2815 5965 9.052759 TGGTAAACTTTGAGAAATGTTCTACTC 57.947 33.333 0.00 0.00 40.87 2.59
2872 6212 9.206870 GAGCTTGGATGAACAATAAAATTCAAA 57.793 29.630 0.00 0.00 38.29 2.69
2873 6213 8.366401 TGAGCTTGGATGAACAATAAAATTCAA 58.634 29.630 0.00 0.00 38.29 2.69
2874 6214 7.894708 TGAGCTTGGATGAACAATAAAATTCA 58.105 30.769 0.00 0.00 39.09 2.57
2875 6215 8.937634 ATGAGCTTGGATGAACAATAAAATTC 57.062 30.769 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.