Multiple sequence alignment - TraesCS1D01G326200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G326200 chr1D 100.000 2483 0 0 1 2483 418757024 418754542 0.000000e+00 4586.0
1 TraesCS1D01G326200 chr1D 94.972 895 24 6 731 1605 419296868 419295975 0.000000e+00 1384.0
2 TraesCS1D01G326200 chr1D 88.496 1104 101 11 652 1738 418880543 418879449 0.000000e+00 1312.0
3 TraesCS1D01G326200 chr1D 94.737 798 24 8 1654 2437 419295983 419295190 0.000000e+00 1225.0
4 TraesCS1D01G326200 chr1D 89.786 842 74 10 904 1738 418670483 418669647 0.000000e+00 1068.0
5 TraesCS1D01G326200 chr1D 84.663 965 103 13 652 1609 419172934 419172008 0.000000e+00 920.0
6 TraesCS1D01G326200 chr1D 91.954 174 12 2 652 824 418670766 418670594 2.470000e-60 243.0
7 TraesCS1D01G326200 chr1D 84.553 123 17 1 1883 2003 418755299 418755177 1.210000e-23 121.0
8 TraesCS1D01G326200 chr1D 91.667 60 5 0 593 652 112870683 112870742 1.580000e-12 84.2
9 TraesCS1D01G326200 chr1D 89.062 64 6 1 589 652 476031368 476031306 7.360000e-11 78.7
10 TraesCS1D01G326200 chr1B 88.074 914 99 7 652 1563 566251506 566250601 0.000000e+00 1075.0
11 TraesCS1D01G326200 chr1B 89.787 656 54 11 1452 2102 566376008 566375361 0.000000e+00 828.0
12 TraesCS1D01G326200 chr1B 91.906 556 44 1 904 1458 566389063 566388508 0.000000e+00 776.0
13 TraesCS1D01G326200 chr1B 87.551 490 31 11 1915 2393 566375485 566375015 7.810000e-150 540.0
14 TraesCS1D01G326200 chr1B 91.270 252 18 3 658 907 566405311 566405062 8.500000e-90 340.0
15 TraesCS1D01G326200 chr1B 94.350 177 10 0 1565 1741 566250516 566250340 3.150000e-69 272.0
16 TraesCS1D01G326200 chr1B 89.041 73 6 1 769 839 566184500 566184428 3.400000e-14 89.8
17 TraesCS1D01G326200 chr1A 75.332 677 101 28 1732 2393 516148081 516147456 5.270000e-67 265.0
18 TraesCS1D01G326200 chr1A 99.074 108 1 0 1561 1668 516048172 516048065 7.010000e-46 195.0
19 TraesCS1D01G326200 chr1A 95.833 72 3 0 1278 1349 516048249 516048178 1.560000e-22 117.0
20 TraesCS1D01G326200 chr1A 81.690 142 14 5 698 839 516041648 516041519 9.390000e-20 108.0
21 TraesCS1D01G326200 chr1A 83.544 79 10 3 1928 2003 516148043 516147965 1.230000e-08 71.3
22 TraesCS1D01G326200 chr4B 83.491 212 32 2 4 215 577215261 577215053 7.010000e-46 195.0
23 TraesCS1D01G326200 chr7B 81.068 206 35 3 4 207 426338908 426339111 7.110000e-36 161.0
24 TraesCS1D01G326200 chr7B 74.750 400 62 20 992 1354 27493863 27494260 2.570000e-30 143.0
25 TraesCS1D01G326200 chr7B 94.444 54 3 0 602 655 704396612 704396665 1.580000e-12 84.2
26 TraesCS1D01G326200 chr7B 87.500 64 8 0 589 652 64665023 64664960 9.520000e-10 75.0
27 TraesCS1D01G326200 chr7D 75.521 384 63 20 1000 1354 80466969 80467350 2.560000e-35 159.0
28 TraesCS1D01G326200 chr7D 85.849 106 12 3 1911 2014 446371257 446371361 2.610000e-20 110.0
29 TraesCS1D01G326200 chr5A 74.651 430 76 23 1775 2180 414413668 414414088 2.560000e-35 159.0
30 TraesCS1D01G326200 chr4A 79.899 199 31 9 13 208 343879470 343879662 1.200000e-28 137.0
31 TraesCS1D01G326200 chrUn 94.545 55 3 0 597 651 225565393 225565447 4.400000e-13 86.1
32 TraesCS1D01G326200 chrUn 91.803 61 5 0 597 657 237458977 237458917 4.400000e-13 86.1
33 TraesCS1D01G326200 chrUn 91.803 61 5 0 597 657 257670693 257670633 4.400000e-13 86.1
34 TraesCS1D01G326200 chrUn 91.803 61 5 0 597 657 279680834 279680774 4.400000e-13 86.1
35 TraesCS1D01G326200 chr2A 78.417 139 20 8 1916 2048 392848238 392848372 5.690000e-12 82.4
36 TraesCS1D01G326200 chr2A 81.319 91 13 3 1908 1994 501290474 501290384 1.230000e-08 71.3
37 TraesCS1D01G326200 chr6D 87.692 65 8 0 589 653 438001866 438001802 2.650000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G326200 chr1D 418754542 418757024 2482 True 2353.5 4586 92.2765 1 2483 2 chr1D.!!$R5 2482
1 TraesCS1D01G326200 chr1D 418879449 418880543 1094 True 1312.0 1312 88.4960 652 1738 1 chr1D.!!$R1 1086
2 TraesCS1D01G326200 chr1D 419295190 419296868 1678 True 1304.5 1384 94.8545 731 2437 2 chr1D.!!$R6 1706
3 TraesCS1D01G326200 chr1D 419172008 419172934 926 True 920.0 920 84.6630 652 1609 1 chr1D.!!$R2 957
4 TraesCS1D01G326200 chr1D 418669647 418670766 1119 True 655.5 1068 90.8700 652 1738 2 chr1D.!!$R4 1086
5 TraesCS1D01G326200 chr1B 566388508 566389063 555 True 776.0 776 91.9060 904 1458 1 chr1B.!!$R2 554
6 TraesCS1D01G326200 chr1B 566375015 566376008 993 True 684.0 828 88.6690 1452 2393 2 chr1B.!!$R5 941
7 TraesCS1D01G326200 chr1B 566250340 566251506 1166 True 673.5 1075 91.2120 652 1741 2 chr1B.!!$R4 1089

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
308 309 0.035056 GTCTGCTACAACTGGGGCAT 60.035 55.0 0.0 0.0 34.12 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2257 2491 0.111061 TTCAGTGAATGGCAGCCACT 59.889 50.0 19.1 5.27 41.35 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.580326 GCGATGGCGGCAACAATG 60.580 61.111 18.31 5.31 38.16 2.82
20 21 3.050166 GCGATGGCGGCAACAATGA 62.050 57.895 18.31 0.00 38.16 2.57
21 22 1.729276 CGATGGCGGCAACAATGAT 59.271 52.632 18.31 0.00 0.00 2.45
22 23 0.101040 CGATGGCGGCAACAATGATT 59.899 50.000 18.31 0.00 0.00 2.57
23 24 1.469595 CGATGGCGGCAACAATGATTT 60.470 47.619 18.31 0.00 0.00 2.17
24 25 2.620242 GATGGCGGCAACAATGATTTT 58.380 42.857 18.31 0.00 0.00 1.82
25 26 1.793258 TGGCGGCAACAATGATTTTG 58.207 45.000 10.22 0.00 0.00 2.44
26 27 0.443478 GGCGGCAACAATGATTTTGC 59.557 50.000 3.07 13.12 46.14 3.68
27 28 1.431496 GCGGCAACAATGATTTTGCT 58.569 45.000 17.78 0.00 46.11 3.91
28 29 1.799994 GCGGCAACAATGATTTTGCTT 59.200 42.857 17.78 0.00 46.11 3.91
29 30 2.159801 GCGGCAACAATGATTTTGCTTC 60.160 45.455 17.78 10.42 46.11 3.86
30 31 3.058450 CGGCAACAATGATTTTGCTTCA 58.942 40.909 17.78 0.00 46.11 3.02
31 32 3.493877 CGGCAACAATGATTTTGCTTCAA 59.506 39.130 17.78 0.00 46.11 2.69
32 33 4.608890 CGGCAACAATGATTTTGCTTCAAC 60.609 41.667 17.78 6.61 46.11 3.18
33 34 4.319694 GGCAACAATGATTTTGCTTCAACC 60.320 41.667 17.78 4.35 46.11 3.77
34 35 4.512571 GCAACAATGATTTTGCTTCAACCT 59.487 37.500 13.81 0.00 43.96 3.50
35 36 5.007921 GCAACAATGATTTTGCTTCAACCTT 59.992 36.000 13.81 0.00 43.96 3.50
36 37 6.652245 CAACAATGATTTTGCTTCAACCTTC 58.348 36.000 0.00 0.00 0.00 3.46
37 38 4.984161 ACAATGATTTTGCTTCAACCTTCG 59.016 37.500 0.00 0.00 0.00 3.79
38 39 4.853924 ATGATTTTGCTTCAACCTTCGT 57.146 36.364 0.00 0.00 0.00 3.85
39 40 4.223320 TGATTTTGCTTCAACCTTCGTC 57.777 40.909 0.00 0.00 0.00 4.20
40 41 3.629855 TGATTTTGCTTCAACCTTCGTCA 59.370 39.130 0.00 0.00 0.00 4.35
41 42 4.097135 TGATTTTGCTTCAACCTTCGTCAA 59.903 37.500 0.00 0.00 0.00 3.18
42 43 3.414549 TTTGCTTCAACCTTCGTCAAC 57.585 42.857 0.00 0.00 0.00 3.18
43 44 2.325583 TGCTTCAACCTTCGTCAACT 57.674 45.000 0.00 0.00 0.00 3.16
44 45 2.639065 TGCTTCAACCTTCGTCAACTT 58.361 42.857 0.00 0.00 0.00 2.66
45 46 3.013921 TGCTTCAACCTTCGTCAACTTT 58.986 40.909 0.00 0.00 0.00 2.66
46 47 3.442273 TGCTTCAACCTTCGTCAACTTTT 59.558 39.130 0.00 0.00 0.00 2.27
47 48 3.791353 GCTTCAACCTTCGTCAACTTTTG 59.209 43.478 0.00 0.00 0.00 2.44
48 49 3.414549 TCAACCTTCGTCAACTTTTGC 57.585 42.857 0.00 0.00 0.00 3.68
49 50 3.013921 TCAACCTTCGTCAACTTTTGCT 58.986 40.909 0.00 0.00 0.00 3.91
50 51 4.193090 TCAACCTTCGTCAACTTTTGCTA 58.807 39.130 0.00 0.00 0.00 3.49
51 52 4.034742 TCAACCTTCGTCAACTTTTGCTAC 59.965 41.667 0.00 0.00 0.00 3.58
52 53 3.537580 ACCTTCGTCAACTTTTGCTACA 58.462 40.909 0.00 0.00 0.00 2.74
53 54 3.942748 ACCTTCGTCAACTTTTGCTACAA 59.057 39.130 0.00 0.00 0.00 2.41
54 55 4.201881 ACCTTCGTCAACTTTTGCTACAAC 60.202 41.667 0.00 0.00 0.00 3.32
55 56 3.955771 TCGTCAACTTTTGCTACAACC 57.044 42.857 0.00 0.00 0.00 3.77
56 57 3.271729 TCGTCAACTTTTGCTACAACCA 58.728 40.909 0.00 0.00 0.00 3.67
57 58 3.690139 TCGTCAACTTTTGCTACAACCAA 59.310 39.130 0.00 0.00 0.00 3.67
58 59 4.336993 TCGTCAACTTTTGCTACAACCAAT 59.663 37.500 0.00 0.00 0.00 3.16
59 60 4.440758 CGTCAACTTTTGCTACAACCAATG 59.559 41.667 0.00 0.00 0.00 2.82
60 61 5.587289 GTCAACTTTTGCTACAACCAATGA 58.413 37.500 0.00 0.00 0.00 2.57
61 62 5.458779 GTCAACTTTTGCTACAACCAATGAC 59.541 40.000 0.00 0.00 0.00 3.06
62 63 4.223320 ACTTTTGCTACAACCAATGACG 57.777 40.909 0.00 0.00 0.00 4.35
63 64 3.880490 ACTTTTGCTACAACCAATGACGA 59.120 39.130 0.00 0.00 0.00 4.20
64 65 4.024048 ACTTTTGCTACAACCAATGACGAG 60.024 41.667 0.00 0.00 0.00 4.18
65 66 3.394674 TTGCTACAACCAATGACGAGA 57.605 42.857 0.00 0.00 0.00 4.04
66 67 3.394674 TGCTACAACCAATGACGAGAA 57.605 42.857 0.00 0.00 0.00 2.87
67 68 3.937814 TGCTACAACCAATGACGAGAAT 58.062 40.909 0.00 0.00 0.00 2.40
68 69 4.323417 TGCTACAACCAATGACGAGAATT 58.677 39.130 0.00 0.00 0.00 2.17
69 70 4.154015 TGCTACAACCAATGACGAGAATTG 59.846 41.667 0.00 0.00 35.26 2.32
70 71 4.154195 GCTACAACCAATGACGAGAATTGT 59.846 41.667 0.00 0.00 33.93 2.71
71 72 5.334879 GCTACAACCAATGACGAGAATTGTT 60.335 40.000 0.00 0.00 33.93 2.83
72 73 6.128391 GCTACAACCAATGACGAGAATTGTTA 60.128 38.462 0.00 0.00 33.93 2.41
73 74 5.997385 ACAACCAATGACGAGAATTGTTAC 58.003 37.500 0.00 0.00 33.93 2.50
74 75 5.529430 ACAACCAATGACGAGAATTGTTACA 59.471 36.000 0.00 0.00 33.93 2.41
75 76 6.038825 ACAACCAATGACGAGAATTGTTACAA 59.961 34.615 0.00 0.00 33.93 2.41
76 77 5.997385 ACCAATGACGAGAATTGTTACAAC 58.003 37.500 0.00 0.00 33.93 3.32
77 78 5.048991 ACCAATGACGAGAATTGTTACAACC 60.049 40.000 0.00 0.00 33.93 3.77
78 79 5.049060 CCAATGACGAGAATTGTTACAACCA 60.049 40.000 0.00 0.00 33.93 3.67
79 80 6.349280 CCAATGACGAGAATTGTTACAACCAT 60.349 38.462 0.00 0.00 33.93 3.55
80 81 6.817765 ATGACGAGAATTGTTACAACCATT 57.182 33.333 0.00 0.00 28.27 3.16
81 82 5.996219 TGACGAGAATTGTTACAACCATTG 58.004 37.500 0.00 0.00 28.27 2.82
82 83 5.760743 TGACGAGAATTGTTACAACCATTGA 59.239 36.000 0.00 0.00 28.27 2.57
83 84 5.997385 ACGAGAATTGTTACAACCATTGAC 58.003 37.500 0.00 0.00 0.00 3.18
84 85 5.079406 CGAGAATTGTTACAACCATTGACG 58.921 41.667 0.00 0.00 0.00 4.35
85 86 5.333798 CGAGAATTGTTACAACCATTGACGT 60.334 40.000 0.00 0.00 0.00 4.34
86 87 6.385649 AGAATTGTTACAACCATTGACGTT 57.614 33.333 0.00 0.00 0.00 3.99
87 88 6.205784 AGAATTGTTACAACCATTGACGTTG 58.794 36.000 0.00 4.77 44.95 4.10
88 89 5.759506 ATTGTTACAACCATTGACGTTGA 57.240 34.783 0.00 0.00 42.63 3.18
89 90 5.759506 TTGTTACAACCATTGACGTTGAT 57.240 34.783 11.29 0.00 42.63 2.57
90 91 6.862711 TTGTTACAACCATTGACGTTGATA 57.137 33.333 11.29 0.93 42.63 2.15
91 92 6.862711 TGTTACAACCATTGACGTTGATAA 57.137 33.333 11.29 5.41 42.63 1.75
92 93 7.441890 TGTTACAACCATTGACGTTGATAAT 57.558 32.000 11.29 0.00 42.63 1.28
93 94 7.301789 TGTTACAACCATTGACGTTGATAATG 58.698 34.615 11.29 0.00 42.63 1.90
94 95 4.732784 ACAACCATTGACGTTGATAATGC 58.267 39.130 11.29 0.00 42.63 3.56
95 96 3.673746 ACCATTGACGTTGATAATGCG 57.326 42.857 0.00 0.00 32.01 4.73
96 97 3.266636 ACCATTGACGTTGATAATGCGA 58.733 40.909 0.00 0.00 32.01 5.10
97 98 3.876914 ACCATTGACGTTGATAATGCGAT 59.123 39.130 0.00 0.00 32.01 4.58
98 99 4.024893 ACCATTGACGTTGATAATGCGATC 60.025 41.667 0.00 0.00 32.01 3.69
99 100 4.457810 CATTGACGTTGATAATGCGATCC 58.542 43.478 0.00 0.00 0.00 3.36
100 101 3.172229 TGACGTTGATAATGCGATCCA 57.828 42.857 0.00 0.00 0.00 3.41
101 102 2.863740 TGACGTTGATAATGCGATCCAC 59.136 45.455 0.00 0.00 0.00 4.02
102 103 2.863740 GACGTTGATAATGCGATCCACA 59.136 45.455 0.00 0.00 0.00 4.17
103 104 3.266636 ACGTTGATAATGCGATCCACAA 58.733 40.909 0.00 0.00 0.00 3.33
104 105 3.063452 ACGTTGATAATGCGATCCACAAC 59.937 43.478 0.00 0.00 34.72 3.32
105 106 3.607439 GTTGATAATGCGATCCACAACG 58.393 45.455 0.00 0.00 0.00 4.10
106 107 2.209273 TGATAATGCGATCCACAACGG 58.791 47.619 0.00 0.00 0.00 4.44
123 124 2.471255 GGAGGTGCCGACATCTTTG 58.529 57.895 0.00 0.00 37.38 2.77
124 125 0.321653 GGAGGTGCCGACATCTTTGT 60.322 55.000 0.00 0.00 37.38 2.83
125 126 1.523758 GAGGTGCCGACATCTTTGTT 58.476 50.000 0.00 0.00 37.38 2.83
126 127 1.197721 GAGGTGCCGACATCTTTGTTG 59.802 52.381 0.00 0.00 37.38 3.33
127 128 0.387239 GGTGCCGACATCTTTGTTGC 60.387 55.000 0.00 0.00 36.12 4.17
128 129 0.310543 GTGCCGACATCTTTGTTGCA 59.689 50.000 0.00 0.00 39.86 4.08
129 130 1.028130 TGCCGACATCTTTGTTGCAA 58.972 45.000 0.00 0.00 39.47 4.08
130 131 1.268999 TGCCGACATCTTTGTTGCAAC 60.269 47.619 22.83 22.83 39.47 4.17
131 132 1.930371 GCCGACATCTTTGTTGCAACC 60.930 52.381 26.14 9.39 36.12 3.77
132 133 1.336440 CCGACATCTTTGTTGCAACCA 59.664 47.619 26.14 13.54 36.12 3.67
133 134 2.030007 CCGACATCTTTGTTGCAACCAT 60.030 45.455 26.14 10.37 36.12 3.55
134 135 3.236816 CGACATCTTTGTTGCAACCATC 58.763 45.455 26.14 8.87 35.79 3.51
135 136 3.304592 CGACATCTTTGTTGCAACCATCA 60.305 43.478 26.14 8.83 35.79 3.07
136 137 4.616604 CGACATCTTTGTTGCAACCATCAT 60.617 41.667 26.14 10.72 35.79 2.45
137 138 4.813027 ACATCTTTGTTGCAACCATCATC 58.187 39.130 26.14 0.22 29.55 2.92
138 139 3.557577 TCTTTGTTGCAACCATCATCG 57.442 42.857 26.14 8.18 0.00 3.84
139 140 2.228582 TCTTTGTTGCAACCATCATCGG 59.771 45.455 26.14 8.24 0.00 4.18
140 141 1.902938 TTGTTGCAACCATCATCGGA 58.097 45.000 26.14 1.54 0.00 4.55
141 142 2.127271 TGTTGCAACCATCATCGGAT 57.873 45.000 26.14 0.00 0.00 4.18
142 143 2.445427 TGTTGCAACCATCATCGGATT 58.555 42.857 26.14 0.00 0.00 3.01
143 144 2.824936 TGTTGCAACCATCATCGGATTT 59.175 40.909 26.14 0.00 0.00 2.17
144 145 3.257873 TGTTGCAACCATCATCGGATTTT 59.742 39.130 26.14 0.00 0.00 1.82
145 146 4.244862 GTTGCAACCATCATCGGATTTTT 58.755 39.130 19.15 0.00 0.00 1.94
146 147 3.847542 TGCAACCATCATCGGATTTTTG 58.152 40.909 0.00 0.00 0.00 2.44
147 148 2.604462 GCAACCATCATCGGATTTTTGC 59.396 45.455 0.00 0.00 39.58 3.68
148 149 3.676873 GCAACCATCATCGGATTTTTGCT 60.677 43.478 10.56 0.00 41.39 3.91
149 150 4.439974 GCAACCATCATCGGATTTTTGCTA 60.440 41.667 10.56 0.00 41.39 3.49
150 151 4.900635 ACCATCATCGGATTTTTGCTAC 57.099 40.909 0.00 0.00 0.00 3.58
151 152 4.269183 ACCATCATCGGATTTTTGCTACA 58.731 39.130 0.00 0.00 0.00 2.74
152 153 4.704540 ACCATCATCGGATTTTTGCTACAA 59.295 37.500 0.00 0.00 0.00 2.41
153 154 5.036737 CCATCATCGGATTTTTGCTACAAC 58.963 41.667 0.00 0.00 0.00 3.32
154 155 4.695217 TCATCGGATTTTTGCTACAACC 57.305 40.909 0.00 0.00 0.00 3.77
155 156 4.331968 TCATCGGATTTTTGCTACAACCT 58.668 39.130 0.00 0.00 0.00 3.50
156 157 4.155826 TCATCGGATTTTTGCTACAACCTG 59.844 41.667 0.00 0.00 0.00 4.00
157 158 2.227865 TCGGATTTTTGCTACAACCTGC 59.772 45.455 0.00 0.00 0.00 4.85
158 159 2.595386 GGATTTTTGCTACAACCTGCG 58.405 47.619 0.00 0.00 0.00 5.18
159 160 2.227865 GGATTTTTGCTACAACCTGCGA 59.772 45.455 0.00 0.00 0.00 5.10
160 161 3.305064 GGATTTTTGCTACAACCTGCGAA 60.305 43.478 0.00 0.00 0.00 4.70
161 162 3.347958 TTTTTGCTACAACCTGCGAAG 57.652 42.857 0.00 0.00 34.52 3.79
162 163 1.234821 TTTGCTACAACCTGCGAAGG 58.765 50.000 8.33 8.33 0.00 3.46
163 164 0.394938 TTGCTACAACCTGCGAAGGA 59.605 50.000 19.18 0.00 0.00 3.36
164 165 0.394938 TGCTACAACCTGCGAAGGAA 59.605 50.000 19.18 0.00 0.00 3.36
165 166 1.202710 TGCTACAACCTGCGAAGGAAA 60.203 47.619 19.18 0.00 0.00 3.13
166 167 2.084546 GCTACAACCTGCGAAGGAAAT 58.915 47.619 19.18 2.58 0.00 2.17
167 168 2.488153 GCTACAACCTGCGAAGGAAATT 59.512 45.455 19.18 0.00 0.00 1.82
168 169 3.670627 GCTACAACCTGCGAAGGAAATTG 60.671 47.826 19.18 13.23 0.00 2.32
169 170 1.000274 ACAACCTGCGAAGGAAATTGC 60.000 47.619 19.18 0.00 0.00 3.56
170 171 1.270550 CAACCTGCGAAGGAAATTGCT 59.729 47.619 19.18 0.00 0.00 3.91
171 172 2.487762 CAACCTGCGAAGGAAATTGCTA 59.512 45.455 19.18 0.00 0.00 3.49
172 173 2.084546 ACCTGCGAAGGAAATTGCTAC 58.915 47.619 19.18 0.00 0.00 3.58
173 174 2.083774 CCTGCGAAGGAAATTGCTACA 58.916 47.619 1.89 0.00 0.00 2.74
174 175 2.487762 CCTGCGAAGGAAATTGCTACAA 59.512 45.455 1.89 0.00 0.00 2.41
175 176 3.492313 CTGCGAAGGAAATTGCTACAAC 58.508 45.455 0.00 0.00 0.00 3.32
176 177 2.227865 TGCGAAGGAAATTGCTACAACC 59.772 45.455 0.00 0.00 0.00 3.77
177 178 2.727916 GCGAAGGAAATTGCTACAACCG 60.728 50.000 0.00 0.00 0.00 4.44
178 179 2.159572 CGAAGGAAATTGCTACAACCGG 60.160 50.000 0.00 0.00 0.00 5.28
179 180 1.173913 AGGAAATTGCTACAACCGGC 58.826 50.000 0.00 0.00 0.00 6.13
180 181 0.885196 GGAAATTGCTACAACCGGCA 59.115 50.000 0.00 0.00 36.62 5.69
183 184 4.073052 TTGCTACAACCGGCAAGG 57.927 55.556 0.00 0.00 42.45 3.61
184 185 2.265182 TTGCTACAACCGGCAAGGC 61.265 57.895 0.00 0.00 46.52 4.35
185 186 3.440415 GCTACAACCGGCAAGGCC 61.440 66.667 0.00 0.00 46.52 5.19
228 229 2.124695 GGGGGAGGATGTTGCGAC 60.125 66.667 0.00 0.00 0.00 5.19
229 230 2.124695 GGGGAGGATGTTGCGACC 60.125 66.667 0.45 0.00 0.00 4.79
230 231 2.511600 GGGAGGATGTTGCGACCG 60.512 66.667 0.45 0.00 0.00 4.79
231 232 2.264794 GGAGGATGTTGCGACCGT 59.735 61.111 0.45 0.00 0.00 4.83
232 233 1.810030 GGAGGATGTTGCGACCGTC 60.810 63.158 0.45 0.00 0.00 4.79
233 234 2.126071 AGGATGTTGCGACCGTCG 60.126 61.111 16.72 16.72 43.89 5.12
246 247 3.541831 CGTCGCCGGTCGTTGATG 61.542 66.667 16.00 3.56 39.67 3.07
247 248 3.849953 GTCGCCGGTCGTTGATGC 61.850 66.667 16.00 0.00 39.67 3.91
265 266 4.933064 GACGCCGCGATGGGAGAG 62.933 72.222 21.79 0.00 38.63 3.20
268 269 4.292178 GCCGCGATGGGAGAGGAG 62.292 72.222 8.23 0.00 38.63 3.69
269 270 3.610669 CCGCGATGGGAGAGGAGG 61.611 72.222 8.23 0.00 0.00 4.30
270 271 3.610669 CGCGATGGGAGAGGAGGG 61.611 72.222 0.00 0.00 0.00 4.30
271 272 2.123251 GCGATGGGAGAGGAGGGA 60.123 66.667 0.00 0.00 0.00 4.20
272 273 2.206536 GCGATGGGAGAGGAGGGAG 61.207 68.421 0.00 0.00 0.00 4.30
273 274 1.539165 CGATGGGAGAGGAGGGAGA 59.461 63.158 0.00 0.00 0.00 3.71
274 275 0.105964 CGATGGGAGAGGAGGGAGAA 60.106 60.000 0.00 0.00 0.00 2.87
275 276 1.419381 GATGGGAGAGGAGGGAGAAC 58.581 60.000 0.00 0.00 0.00 3.01
276 277 0.397816 ATGGGAGAGGAGGGAGAACG 60.398 60.000 0.00 0.00 0.00 3.95
277 278 1.758906 GGGAGAGGAGGGAGAACGG 60.759 68.421 0.00 0.00 0.00 4.44
278 279 1.306970 GGAGAGGAGGGAGAACGGA 59.693 63.158 0.00 0.00 0.00 4.69
279 280 0.753848 GGAGAGGAGGGAGAACGGAG 60.754 65.000 0.00 0.00 0.00 4.63
280 281 0.753848 GAGAGGAGGGAGAACGGAGG 60.754 65.000 0.00 0.00 0.00 4.30
281 282 2.364448 AGGAGGGAGAACGGAGGC 60.364 66.667 0.00 0.00 0.00 4.70
282 283 3.471806 GGAGGGAGAACGGAGGCC 61.472 72.222 0.00 0.00 0.00 5.19
299 300 4.077184 CGGGCGGGTCTGCTACAA 62.077 66.667 1.58 0.00 34.52 2.41
300 301 2.436115 GGGCGGGTCTGCTACAAC 60.436 66.667 1.58 0.00 34.52 3.32
301 302 2.663196 GGCGGGTCTGCTACAACT 59.337 61.111 1.58 0.00 34.52 3.16
302 303 1.741770 GGCGGGTCTGCTACAACTG 60.742 63.158 1.58 0.00 34.52 3.16
303 304 1.741770 GCGGGTCTGCTACAACTGG 60.742 63.158 0.00 0.00 0.00 4.00
304 305 1.079127 CGGGTCTGCTACAACTGGG 60.079 63.158 0.00 0.00 0.00 4.45
305 306 1.299976 GGGTCTGCTACAACTGGGG 59.700 63.158 0.00 0.00 0.00 4.96
306 307 1.377333 GGTCTGCTACAACTGGGGC 60.377 63.158 0.00 0.00 0.00 5.80
307 308 1.374947 GTCTGCTACAACTGGGGCA 59.625 57.895 0.00 0.00 0.00 5.36
308 309 0.035056 GTCTGCTACAACTGGGGCAT 60.035 55.000 0.00 0.00 34.12 4.40
309 310 0.035152 TCTGCTACAACTGGGGCATG 60.035 55.000 0.00 0.00 34.12 4.06
310 311 1.001020 TGCTACAACTGGGGCATGG 60.001 57.895 0.00 0.00 0.00 3.66
311 312 2.418083 GCTACAACTGGGGCATGGC 61.418 63.158 11.56 11.56 0.00 4.40
312 313 2.045438 TACAACTGGGGCATGGCG 60.045 61.111 13.76 1.88 0.00 5.69
313 314 2.535485 CTACAACTGGGGCATGGCGA 62.535 60.000 13.76 1.07 0.00 5.54
314 315 2.813226 TACAACTGGGGCATGGCGAC 62.813 60.000 13.76 9.34 0.00 5.19
320 321 4.830765 GGGCATGGCGACGCTACA 62.831 66.667 20.77 10.66 0.00 2.74
321 322 2.817834 GGCATGGCGACGCTACAA 60.818 61.111 20.77 3.65 0.00 2.41
322 323 2.395360 GGCATGGCGACGCTACAAA 61.395 57.895 20.77 1.02 0.00 2.83
323 324 1.226018 GCATGGCGACGCTACAAAC 60.226 57.895 20.77 1.85 0.00 2.93
324 325 1.906994 GCATGGCGACGCTACAAACA 61.907 55.000 20.77 8.27 0.00 2.83
325 326 0.515127 CATGGCGACGCTACAAACAA 59.485 50.000 20.77 0.00 0.00 2.83
326 327 0.796312 ATGGCGACGCTACAAACAAG 59.204 50.000 20.77 0.00 0.00 3.16
327 328 1.225376 TGGCGACGCTACAAACAAGG 61.225 55.000 20.77 0.00 0.00 3.61
328 329 1.154469 GCGACGCTACAAACAAGGC 60.154 57.895 13.73 0.00 0.00 4.35
329 330 1.837538 GCGACGCTACAAACAAGGCA 61.838 55.000 13.73 0.00 0.00 4.75
330 331 0.110823 CGACGCTACAAACAAGGCAC 60.111 55.000 0.00 0.00 0.00 5.01
331 332 0.237498 GACGCTACAAACAAGGCACC 59.763 55.000 0.00 0.00 0.00 5.01
332 333 0.464735 ACGCTACAAACAAGGCACCA 60.465 50.000 0.00 0.00 0.00 4.17
333 334 0.040425 CGCTACAAACAAGGCACCAC 60.040 55.000 0.00 0.00 0.00 4.16
334 335 0.040425 GCTACAAACAAGGCACCACG 60.040 55.000 0.00 0.00 0.00 4.94
335 336 1.588674 CTACAAACAAGGCACCACGA 58.411 50.000 0.00 0.00 0.00 4.35
336 337 1.944024 CTACAAACAAGGCACCACGAA 59.056 47.619 0.00 0.00 0.00 3.85
337 338 1.178276 ACAAACAAGGCACCACGAAA 58.822 45.000 0.00 0.00 0.00 3.46
338 339 1.135228 ACAAACAAGGCACCACGAAAC 60.135 47.619 0.00 0.00 0.00 2.78
339 340 1.135257 CAAACAAGGCACCACGAAACA 60.135 47.619 0.00 0.00 0.00 2.83
340 341 1.178276 AACAAGGCACCACGAAACAA 58.822 45.000 0.00 0.00 0.00 2.83
341 342 0.454196 ACAAGGCACCACGAAACAAC 59.546 50.000 0.00 0.00 0.00 3.32
342 343 0.591236 CAAGGCACCACGAAACAACG 60.591 55.000 0.00 0.00 39.31 4.10
343 344 0.745128 AAGGCACCACGAAACAACGA 60.745 50.000 0.00 0.00 37.03 3.85
344 345 0.534203 AGGCACCACGAAACAACGAT 60.534 50.000 0.00 0.00 37.03 3.73
345 346 0.385473 GGCACCACGAAACAACGATG 60.385 55.000 0.00 0.00 37.03 3.84
346 347 0.584396 GCACCACGAAACAACGATGA 59.416 50.000 0.00 0.00 37.03 2.92
347 348 1.398451 GCACCACGAAACAACGATGAG 60.398 52.381 0.00 0.00 37.03 2.90
348 349 0.865769 ACCACGAAACAACGATGAGC 59.134 50.000 0.00 0.00 37.03 4.26
350 351 0.179250 CACGAAACAACGATGAGCGG 60.179 55.000 0.00 0.00 46.49 5.52
351 352 1.289109 ACGAAACAACGATGAGCGGG 61.289 55.000 0.00 0.00 46.49 6.13
352 353 1.134694 GAAACAACGATGAGCGGGC 59.865 57.895 0.00 0.00 46.49 6.13
353 354 2.253414 GAAACAACGATGAGCGGGCC 62.253 60.000 0.00 0.00 46.49 5.80
354 355 2.748058 AAACAACGATGAGCGGGCCT 62.748 55.000 0.84 0.00 46.49 5.19
355 356 2.892425 CAACGATGAGCGGGCCTC 60.892 66.667 0.84 0.00 46.49 4.70
356 357 4.514577 AACGATGAGCGGGCCTCG 62.515 66.667 10.22 10.22 46.49 4.63
368 369 4.802051 GCCTCGCCATGGCCTGAA 62.802 66.667 30.79 12.87 44.32 3.02
369 370 2.045045 CCTCGCCATGGCCTGAAA 60.045 61.111 30.79 10.36 37.98 2.69
370 371 1.678635 CCTCGCCATGGCCTGAAAA 60.679 57.895 30.79 8.59 37.98 2.29
371 372 1.508088 CTCGCCATGGCCTGAAAAC 59.492 57.895 30.79 1.03 37.98 2.43
372 373 1.228398 TCGCCATGGCCTGAAAACA 60.228 52.632 30.79 1.81 37.98 2.83
373 374 1.213537 CGCCATGGCCTGAAAACAG 59.786 57.895 30.79 9.64 37.98 3.16
374 375 1.243342 CGCCATGGCCTGAAAACAGA 61.243 55.000 30.79 0.00 37.98 3.41
375 376 0.244721 GCCATGGCCTGAAAACAGAC 59.755 55.000 27.24 0.00 34.56 3.51
376 377 0.523072 CCATGGCCTGAAAACAGACG 59.477 55.000 3.32 0.00 0.00 4.18
377 378 0.523072 CATGGCCTGAAAACAGACGG 59.477 55.000 3.32 0.00 0.00 4.79
378 379 1.244019 ATGGCCTGAAAACAGACGGC 61.244 55.000 3.32 0.00 39.98 5.68
379 380 2.556287 GCCTGAAAACAGACGGCG 59.444 61.111 4.80 4.80 0.00 6.46
380 381 2.966309 GCCTGAAAACAGACGGCGG 61.966 63.158 13.24 0.00 0.00 6.13
381 382 1.301401 CCTGAAAACAGACGGCGGA 60.301 57.895 13.24 0.00 0.00 5.54
382 383 1.291877 CCTGAAAACAGACGGCGGAG 61.292 60.000 13.24 2.48 0.00 4.63
383 384 1.291877 CTGAAAACAGACGGCGGAGG 61.292 60.000 13.24 1.60 0.00 4.30
384 385 1.005394 GAAAACAGACGGCGGAGGA 60.005 57.895 13.24 0.00 0.00 3.71
385 386 1.004918 AAAACAGACGGCGGAGGAG 60.005 57.895 13.24 0.00 0.00 3.69
386 387 2.450479 AAAACAGACGGCGGAGGAGG 62.450 60.000 13.24 0.00 0.00 4.30
393 394 4.459089 GGCGGAGGAGGCTGTGAC 62.459 72.222 0.00 0.00 0.00 3.67
394 395 4.803426 GCGGAGGAGGCTGTGACG 62.803 72.222 0.00 0.00 0.00 4.35
395 396 4.135153 CGGAGGAGGCTGTGACGG 62.135 72.222 0.00 0.00 0.00 4.79
396 397 3.775654 GGAGGAGGCTGTGACGGG 61.776 72.222 0.00 0.00 0.00 5.28
397 398 3.775654 GAGGAGGCTGTGACGGGG 61.776 72.222 0.00 0.00 0.00 5.73
398 399 4.316823 AGGAGGCTGTGACGGGGA 62.317 66.667 0.00 0.00 0.00 4.81
399 400 3.775654 GGAGGCTGTGACGGGGAG 61.776 72.222 0.00 0.00 0.00 4.30
400 401 4.459089 GAGGCTGTGACGGGGAGC 62.459 72.222 0.00 0.00 0.00 4.70
402 403 4.767255 GGCTGTGACGGGGAGCTG 62.767 72.222 0.00 0.00 33.03 4.24
412 413 4.200283 GGGAGCTGCGACGAGGAG 62.200 72.222 0.00 0.00 41.69 3.69
432 433 4.742201 GCGGTGCGAGGAGAGCAA 62.742 66.667 0.00 0.00 46.97 3.91
433 434 2.507992 CGGTGCGAGGAGAGCAAG 60.508 66.667 0.00 0.00 46.97 4.01
434 435 2.817396 GGTGCGAGGAGAGCAAGC 60.817 66.667 0.00 0.00 46.97 4.01
435 436 3.184683 GTGCGAGGAGAGCAAGCG 61.185 66.667 0.00 0.00 46.97 4.68
436 437 4.441695 TGCGAGGAGAGCAAGCGG 62.442 66.667 0.00 0.00 42.18 5.52
437 438 4.443266 GCGAGGAGAGCAAGCGGT 62.443 66.667 0.00 0.00 34.19 5.68
438 439 2.507992 CGAGGAGAGCAAGCGGTG 60.508 66.667 0.00 0.00 0.00 4.94
439 440 2.125350 GAGGAGAGCAAGCGGTGG 60.125 66.667 0.00 0.00 0.00 4.61
440 441 2.925170 AGGAGAGCAAGCGGTGGT 60.925 61.111 0.00 0.00 41.89 4.16
441 442 2.743928 GGAGAGCAAGCGGTGGTG 60.744 66.667 0.00 0.00 38.34 4.17
442 443 2.031163 GAGAGCAAGCGGTGGTGT 59.969 61.111 0.00 0.00 38.34 4.16
443 444 1.598130 GAGAGCAAGCGGTGGTGTT 60.598 57.895 0.00 0.00 38.34 3.32
444 445 1.845809 GAGAGCAAGCGGTGGTGTTG 61.846 60.000 0.00 0.00 38.34 3.33
445 446 3.542629 GAGCAAGCGGTGGTGTTGC 62.543 63.158 0.04 0.04 45.68 4.17
446 447 3.595758 GCAAGCGGTGGTGTTGCT 61.596 61.111 1.15 0.00 42.70 3.91
447 448 2.332514 CAAGCGGTGGTGTTGCTG 59.667 61.111 0.00 0.00 39.30 4.41
448 449 3.595758 AAGCGGTGGTGTTGCTGC 61.596 61.111 0.00 0.00 39.30 5.25
451 452 3.357079 CGGTGGTGTTGCTGCCTC 61.357 66.667 0.00 0.00 0.00 4.70
452 453 2.985847 GGTGGTGTTGCTGCCTCC 60.986 66.667 0.00 0.00 0.00 4.30
453 454 2.203337 GTGGTGTTGCTGCCTCCA 60.203 61.111 0.00 0.00 0.00 3.86
454 455 1.604593 GTGGTGTTGCTGCCTCCAT 60.605 57.895 0.00 0.00 0.00 3.41
455 456 1.303561 TGGTGTTGCTGCCTCCATC 60.304 57.895 0.00 0.00 0.00 3.51
456 457 2.401766 GGTGTTGCTGCCTCCATCG 61.402 63.158 0.00 0.00 0.00 3.84
457 458 2.046023 TGTTGCTGCCTCCATCGG 60.046 61.111 0.00 0.00 0.00 4.18
458 459 2.268920 GTTGCTGCCTCCATCGGA 59.731 61.111 0.00 0.00 0.00 4.55
474 475 4.760840 GAGCGCGCACAGACTCGA 62.761 66.667 35.10 0.00 0.00 4.04
475 476 4.121669 AGCGCGCACAGACTCGAT 62.122 61.111 35.10 4.83 0.00 3.59
476 477 3.906649 GCGCGCACAGACTCGATG 61.907 66.667 29.10 0.00 0.00 3.84
477 478 3.250323 CGCGCACAGACTCGATGG 61.250 66.667 8.75 0.00 0.00 3.51
478 479 2.181777 GCGCACAGACTCGATGGA 59.818 61.111 0.30 0.00 0.00 3.41
479 480 2.161486 GCGCACAGACTCGATGGAC 61.161 63.158 0.30 0.00 0.00 4.02
480 481 1.212751 CGCACAGACTCGATGGACA 59.787 57.895 0.00 0.00 0.00 4.02
481 482 0.799917 CGCACAGACTCGATGGACAG 60.800 60.000 0.00 0.00 0.00 3.51
482 483 0.528017 GCACAGACTCGATGGACAGA 59.472 55.000 0.00 0.00 0.00 3.41
483 484 1.468908 GCACAGACTCGATGGACAGAG 60.469 57.143 0.00 0.00 40.16 3.35
484 485 1.133982 CACAGACTCGATGGACAGAGG 59.866 57.143 0.00 0.00 38.72 3.69
485 486 0.102120 CAGACTCGATGGACAGAGGC 59.898 60.000 0.00 0.00 42.67 4.70
486 487 0.323816 AGACTCGATGGACAGAGGCA 60.324 55.000 0.95 0.00 44.70 4.75
487 488 0.179124 GACTCGATGGACAGAGGCAC 60.179 60.000 0.00 0.00 41.96 5.01
488 489 1.226802 CTCGATGGACAGAGGCACG 60.227 63.158 0.00 0.00 0.00 5.34
489 490 1.657751 CTCGATGGACAGAGGCACGA 61.658 60.000 0.00 0.00 0.00 4.35
490 491 1.215382 CGATGGACAGAGGCACGAA 59.785 57.895 0.00 0.00 0.00 3.85
491 492 0.803768 CGATGGACAGAGGCACGAAG 60.804 60.000 0.00 0.00 0.00 3.79
492 493 1.078848 ATGGACAGAGGCACGAAGC 60.079 57.895 0.00 0.00 44.65 3.86
504 505 4.759893 CGAAGCGCGTGTTGCTCG 62.760 66.667 8.43 3.66 43.14 5.03
512 513 4.373116 GTGTTGCTCGCGAGGGGA 62.373 66.667 35.10 12.13 0.00 4.81
513 514 3.390521 TGTTGCTCGCGAGGGGAT 61.391 61.111 35.10 0.00 0.00 3.85
514 515 2.125106 GTTGCTCGCGAGGGGATT 60.125 61.111 35.10 0.00 0.00 3.01
515 516 1.745489 GTTGCTCGCGAGGGGATTT 60.745 57.895 35.10 0.00 0.00 2.17
516 517 1.002624 TTGCTCGCGAGGGGATTTT 60.003 52.632 35.10 0.00 0.00 1.82
517 518 0.608035 TTGCTCGCGAGGGGATTTTT 60.608 50.000 35.10 0.00 0.00 1.94
544 545 4.879598 GTTGACTAACGAGGGAAAGAAGA 58.120 43.478 0.00 0.00 0.00 2.87
545 546 4.516365 TGACTAACGAGGGAAAGAAGAC 57.484 45.455 0.00 0.00 0.00 3.01
546 547 3.057736 TGACTAACGAGGGAAAGAAGACG 60.058 47.826 0.00 0.00 0.00 4.18
547 548 3.152341 ACTAACGAGGGAAAGAAGACGA 58.848 45.455 0.00 0.00 0.00 4.20
548 549 3.762823 ACTAACGAGGGAAAGAAGACGAT 59.237 43.478 0.00 0.00 0.00 3.73
549 550 2.656560 ACGAGGGAAAGAAGACGATG 57.343 50.000 0.00 0.00 0.00 3.84
550 551 1.893801 ACGAGGGAAAGAAGACGATGT 59.106 47.619 0.00 0.00 0.00 3.06
551 552 2.263077 CGAGGGAAAGAAGACGATGTG 58.737 52.381 0.00 0.00 0.00 3.21
552 553 2.622436 GAGGGAAAGAAGACGATGTGG 58.378 52.381 0.00 0.00 0.00 4.17
553 554 1.279271 AGGGAAAGAAGACGATGTGGG 59.721 52.381 0.00 0.00 0.00 4.61
554 555 1.679032 GGGAAAGAAGACGATGTGGGG 60.679 57.143 0.00 0.00 0.00 4.96
555 556 1.278127 GGAAAGAAGACGATGTGGGGA 59.722 52.381 0.00 0.00 0.00 4.81
556 557 2.290071 GGAAAGAAGACGATGTGGGGAA 60.290 50.000 0.00 0.00 0.00 3.97
557 558 2.474410 AAGAAGACGATGTGGGGAAC 57.526 50.000 0.00 0.00 0.00 3.62
569 570 3.213264 GGGAACCGTAGCGATCCA 58.787 61.111 12.66 0.00 40.86 3.41
570 571 1.067582 GGGAACCGTAGCGATCCAG 59.932 63.158 12.66 0.00 40.86 3.86
571 572 1.591863 GGAACCGTAGCGATCCAGC 60.592 63.158 0.00 0.00 34.50 4.85
572 573 1.944676 GAACCGTAGCGATCCAGCG 60.945 63.158 0.00 0.00 43.00 5.18
573 574 3.426117 AACCGTAGCGATCCAGCGG 62.426 63.158 9.98 9.98 46.83 5.52
575 576 4.271816 CGTAGCGATCCAGCGGCT 62.272 66.667 0.00 0.00 43.00 5.52
576 577 2.659897 GTAGCGATCCAGCGGCTG 60.660 66.667 22.84 22.84 43.00 4.85
577 578 3.147595 TAGCGATCCAGCGGCTGT 61.148 61.111 26.79 11.01 43.00 4.40
578 579 3.138930 TAGCGATCCAGCGGCTGTC 62.139 63.158 26.79 17.93 43.00 3.51
580 581 4.193334 CGATCCAGCGGCTGTCGA 62.193 66.667 28.54 20.30 42.43 4.20
581 582 2.583593 GATCCAGCGGCTGTCGAC 60.584 66.667 26.79 9.11 42.43 4.20
582 583 4.498520 ATCCAGCGGCTGTCGACG 62.499 66.667 26.79 12.42 46.94 5.12
590 591 2.583593 GCTGTCGACGGCCAGATC 60.584 66.667 34.42 9.75 42.27 2.75
591 592 2.278206 CTGTCGACGGCCAGATCG 60.278 66.667 12.25 13.46 39.72 3.69
592 593 3.758088 CTGTCGACGGCCAGATCGG 62.758 68.421 12.25 2.29 38.86 4.18
593 594 3.515286 GTCGACGGCCAGATCGGA 61.515 66.667 18.04 5.49 38.86 4.55
594 595 2.752640 TCGACGGCCAGATCGGAA 60.753 61.111 18.04 0.76 38.86 4.30
595 596 2.278857 CGACGGCCAGATCGGAAG 60.279 66.667 12.13 3.42 36.56 3.46
596 597 2.107141 GACGGCCAGATCGGAAGG 59.893 66.667 2.24 0.71 36.56 3.46
597 598 2.683933 ACGGCCAGATCGGAAGGT 60.684 61.111 2.24 0.00 36.56 3.50
598 599 2.240162 GACGGCCAGATCGGAAGGTT 62.240 60.000 2.24 0.00 36.56 3.50
599 600 1.815421 CGGCCAGATCGGAAGGTTG 60.815 63.158 2.24 0.00 36.56 3.77
600 601 1.299976 GGCCAGATCGGAAGGTTGT 59.700 57.895 0.00 0.00 36.56 3.32
601 602 1.026718 GGCCAGATCGGAAGGTTGTG 61.027 60.000 0.00 0.00 36.56 3.33
602 603 1.026718 GCCAGATCGGAAGGTTGTGG 61.027 60.000 7.64 0.00 36.56 4.17
603 604 0.392998 CCAGATCGGAAGGTTGTGGG 60.393 60.000 0.00 0.00 36.56 4.61
604 605 1.026718 CAGATCGGAAGGTTGTGGGC 61.027 60.000 0.00 0.00 0.00 5.36
605 606 1.749258 GATCGGAAGGTTGTGGGCC 60.749 63.158 0.00 0.00 0.00 5.80
606 607 3.622060 ATCGGAAGGTTGTGGGCCG 62.622 63.158 0.00 0.00 43.11 6.13
607 608 4.323477 CGGAAGGTTGTGGGCCGA 62.323 66.667 0.00 0.00 44.43 5.54
608 609 2.671963 GGAAGGTTGTGGGCCGAC 60.672 66.667 11.57 11.57 0.00 4.79
609 610 2.430367 GAAGGTTGTGGGCCGACT 59.570 61.111 19.42 0.00 0.00 4.18
610 611 1.966451 GAAGGTTGTGGGCCGACTG 60.966 63.158 19.42 0.00 0.00 3.51
611 612 3.491598 AAGGTTGTGGGCCGACTGG 62.492 63.158 19.42 0.00 38.77 4.00
674 675 7.099120 CCTTTCAATATCTTCCAAAACAAGGG 58.901 38.462 0.00 0.00 0.00 3.95
678 679 2.746279 TCTTCCAAAACAAGGGCAGA 57.254 45.000 0.00 0.00 0.00 4.26
691 692 0.177604 GGGCAGATGTCAGGACTCTG 59.822 60.000 17.23 17.23 42.21 3.35
695 696 2.159170 GCAGATGTCAGGACTCTGGTAC 60.159 54.545 20.31 8.66 41.23 3.34
698 699 3.511934 AGATGTCAGGACTCTGGTACAAC 59.488 47.826 0.65 0.00 41.23 3.32
707 708 5.104485 AGGACTCTGGTACAACTCAGTTTTT 60.104 40.000 0.00 0.00 38.70 1.94
740 741 3.485463 AGACTGTCGAACCCAAATTGA 57.515 42.857 1.52 0.00 0.00 2.57
832 849 5.186942 TCAACTTGCAACTTGGTACAGTTA 58.813 37.500 15.88 0.00 42.39 2.24
919 968 4.569943 ACTAGGCTATAAATGGCATCGTG 58.430 43.478 0.00 0.00 35.81 4.35
956 1005 9.474920 CAAGTCTTCACATCTAATCTAATCCTC 57.525 37.037 0.00 0.00 0.00 3.71
992 1047 0.532862 AGTCTTGGTTGCTGTGTCCG 60.533 55.000 0.00 0.00 0.00 4.79
1038 1093 2.046507 CTTGCTCTCAAGGCGGCT 60.047 61.111 5.25 5.25 44.53 5.52
1146 1221 2.927856 ACATCACCACCTCCGGCA 60.928 61.111 0.00 0.00 0.00 5.69
1147 1222 2.350895 CATCACCACCTCCGGCAA 59.649 61.111 0.00 0.00 0.00 4.52
1263 1338 2.158986 GGAGTGCAGCAGATACTGTGAT 60.159 50.000 0.00 0.00 39.96 3.06
1458 1533 2.644555 AAACGTGCAGCGAGGAGTGT 62.645 55.000 14.18 0.00 44.77 3.55
1504 1579 2.239907 AGGCCTGGAAACTAGCTAAAGG 59.760 50.000 3.11 0.00 0.00 3.11
1510 1591 5.491982 CTGGAAACTAGCTAAAGGATGTGT 58.508 41.667 0.00 0.00 0.00 3.72
1521 1602 0.674581 AGGATGTGTGTCGCATGGTG 60.675 55.000 0.00 0.00 34.53 4.17
1671 1836 1.728971 CTGCACGCTTTCCTCTTGTAG 59.271 52.381 0.00 0.00 0.00 2.74
1879 2045 8.841444 ATCTATACAACAAAAATGTTCATCGC 57.159 30.769 0.00 0.00 32.27 4.58
2110 2342 6.478512 AATGTTCCCCGTATATTGCAAAAT 57.521 33.333 1.71 0.00 0.00 1.82
2125 2357 4.834357 GCAAAATGCACAAAAAGGGAAT 57.166 36.364 0.00 0.00 44.26 3.01
2200 2432 8.638873 GGAAAGGAAGATAAAAGAGAAAACCAA 58.361 33.333 0.00 0.00 0.00 3.67
2251 2485 4.974438 AAGGACACCTGGGCCGGA 62.974 66.667 15.75 0.00 32.13 5.14
2278 2512 1.246056 TGGCTGCCATTCACTGAAGC 61.246 55.000 19.30 0.00 35.05 3.86
2297 2531 1.903404 CTGGACTGTTTGCCACCCC 60.903 63.158 0.00 0.00 0.00 4.95
2437 2681 4.379652 CCCCTGAACTTGTCAAAAATTGG 58.620 43.478 0.00 0.00 35.22 3.16
2438 2682 4.100808 CCCCTGAACTTGTCAAAAATTGGA 59.899 41.667 0.00 0.00 35.22 3.53
2439 2683 5.221702 CCCCTGAACTTGTCAAAAATTGGAT 60.222 40.000 0.00 0.00 35.22 3.41
2440 2684 5.928264 CCCTGAACTTGTCAAAAATTGGATC 59.072 40.000 0.00 0.00 35.22 3.36
2441 2685 6.462768 CCCTGAACTTGTCAAAAATTGGATCA 60.463 38.462 0.00 0.00 35.22 2.92
2442 2686 6.985645 CCTGAACTTGTCAAAAATTGGATCAA 59.014 34.615 0.00 0.00 35.22 2.57
2443 2687 7.658575 CCTGAACTTGTCAAAAATTGGATCAAT 59.341 33.333 0.00 0.00 35.22 2.57
2444 2688 8.592105 TGAACTTGTCAAAAATTGGATCAATC 57.408 30.769 0.00 0.00 30.40 2.67
2445 2689 8.202811 TGAACTTGTCAAAAATTGGATCAATCA 58.797 29.630 0.00 0.00 30.40 2.57
2446 2690 8.597662 AACTTGTCAAAAATTGGATCAATCAG 57.402 30.769 0.00 0.00 32.43 2.90
2447 2691 7.729116 ACTTGTCAAAAATTGGATCAATCAGT 58.271 30.769 0.00 0.00 32.43 3.41
2448 2692 7.869429 ACTTGTCAAAAATTGGATCAATCAGTC 59.131 33.333 0.00 0.00 32.43 3.51
2449 2693 6.690530 TGTCAAAAATTGGATCAATCAGTCC 58.309 36.000 0.00 0.00 32.43 3.85
2450 2694 6.101997 GTCAAAAATTGGATCAATCAGTCCC 58.898 40.000 0.00 0.00 32.43 4.46
2451 2695 6.018469 TCAAAAATTGGATCAATCAGTCCCT 58.982 36.000 0.00 0.00 32.43 4.20
2452 2696 5.927281 AAAATTGGATCAATCAGTCCCTG 57.073 39.130 0.00 0.00 32.43 4.45
2453 2697 3.589951 ATTGGATCAATCAGTCCCTGG 57.410 47.619 0.00 0.00 33.45 4.45
2454 2698 2.268796 TGGATCAATCAGTCCCTGGA 57.731 50.000 0.00 0.00 33.45 3.86
2455 2699 2.780414 TGGATCAATCAGTCCCTGGAT 58.220 47.619 0.00 0.00 33.45 3.41
2456 2700 2.440627 TGGATCAATCAGTCCCTGGATG 59.559 50.000 0.00 0.00 33.45 3.51
2457 2701 2.224719 GGATCAATCAGTCCCTGGATGG 60.225 54.545 0.00 0.00 31.51 3.51
2458 2702 1.971149 TCAATCAGTCCCTGGATGGT 58.029 50.000 0.00 0.00 31.51 3.55
2459 2703 2.278245 TCAATCAGTCCCTGGATGGTT 58.722 47.619 0.00 0.00 31.51 3.67
2460 2704 2.649312 TCAATCAGTCCCTGGATGGTTT 59.351 45.455 0.00 0.00 31.51 3.27
2461 2705 3.075882 TCAATCAGTCCCTGGATGGTTTT 59.924 43.478 0.00 0.00 31.51 2.43
2462 2706 2.584835 TCAGTCCCTGGATGGTTTTG 57.415 50.000 0.00 0.00 31.51 2.44
2463 2707 1.075374 TCAGTCCCTGGATGGTTTTGG 59.925 52.381 0.00 0.00 31.51 3.28
2464 2708 1.075374 CAGTCCCTGGATGGTTTTGGA 59.925 52.381 0.00 0.00 0.00 3.53
2465 2709 1.075536 AGTCCCTGGATGGTTTTGGAC 59.924 52.381 0.00 0.00 42.00 4.02
2466 2710 1.153539 TCCCTGGATGGTTTTGGACA 58.846 50.000 0.00 0.00 0.00 4.02
2467 2711 1.075374 TCCCTGGATGGTTTTGGACAG 59.925 52.381 0.00 0.00 0.00 3.51
2468 2712 1.549203 CCTGGATGGTTTTGGACAGG 58.451 55.000 0.00 0.00 39.45 4.00
2469 2713 1.075374 CCTGGATGGTTTTGGACAGGA 59.925 52.381 0.00 0.00 46.38 3.86
2470 2714 2.291800 CCTGGATGGTTTTGGACAGGAT 60.292 50.000 0.00 0.00 46.38 3.24
2471 2715 3.434309 CTGGATGGTTTTGGACAGGATT 58.566 45.455 0.00 0.00 0.00 3.01
2472 2716 3.834231 CTGGATGGTTTTGGACAGGATTT 59.166 43.478 0.00 0.00 0.00 2.17
2473 2717 5.004361 TGGATGGTTTTGGACAGGATTTA 57.996 39.130 0.00 0.00 0.00 1.40
2474 2718 5.398236 TGGATGGTTTTGGACAGGATTTAA 58.602 37.500 0.00 0.00 0.00 1.52
2475 2719 5.245075 TGGATGGTTTTGGACAGGATTTAAC 59.755 40.000 0.00 0.00 0.00 2.01
2476 2720 4.839668 TGGTTTTGGACAGGATTTAACG 57.160 40.909 0.00 0.00 0.00 3.18
2477 2721 4.208746 TGGTTTTGGACAGGATTTAACGT 58.791 39.130 0.00 0.00 0.00 3.99
2478 2722 4.036971 TGGTTTTGGACAGGATTTAACGTG 59.963 41.667 0.00 0.00 0.00 4.49
2479 2723 4.542735 GTTTTGGACAGGATTTAACGTGG 58.457 43.478 0.00 0.00 0.00 4.94
2480 2724 3.495434 TTGGACAGGATTTAACGTGGT 57.505 42.857 0.00 0.00 0.00 4.16
2481 2725 3.495434 TGGACAGGATTTAACGTGGTT 57.505 42.857 0.00 0.00 0.00 3.67
2482 2726 3.822940 TGGACAGGATTTAACGTGGTTT 58.177 40.909 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.340453 ATCATTGTTGCCGCCATCGC 62.340 55.000 0.00 0.00 0.00 4.58
3 4 0.101040 AATCATTGTTGCCGCCATCG 59.899 50.000 0.00 0.00 0.00 3.84
4 5 2.298411 AAATCATTGTTGCCGCCATC 57.702 45.000 0.00 0.00 0.00 3.51
5 6 2.348660 CAAAATCATTGTTGCCGCCAT 58.651 42.857 0.00 0.00 0.00 4.40
6 7 1.793258 CAAAATCATTGTTGCCGCCA 58.207 45.000 0.00 0.00 0.00 5.69
7 8 0.443478 GCAAAATCATTGTTGCCGCC 59.557 50.000 6.18 0.00 43.49 6.13
8 9 3.953388 GCAAAATCATTGTTGCCGC 57.047 47.368 6.18 0.00 43.49 6.53
12 13 6.562640 CGAAGGTTGAAGCAAAATCATTGTTG 60.563 38.462 0.00 0.00 0.00 3.33
13 14 5.463061 CGAAGGTTGAAGCAAAATCATTGTT 59.537 36.000 0.00 0.00 0.00 2.83
14 15 4.984161 CGAAGGTTGAAGCAAAATCATTGT 59.016 37.500 0.00 0.00 0.00 2.71
15 16 4.984161 ACGAAGGTTGAAGCAAAATCATTG 59.016 37.500 0.00 0.00 0.00 2.82
16 17 5.200368 ACGAAGGTTGAAGCAAAATCATT 57.800 34.783 0.00 0.00 0.00 2.57
17 18 4.278170 TGACGAAGGTTGAAGCAAAATCAT 59.722 37.500 0.00 0.00 0.00 2.45
18 19 3.629855 TGACGAAGGTTGAAGCAAAATCA 59.370 39.130 0.00 0.00 0.00 2.57
19 20 4.223320 TGACGAAGGTTGAAGCAAAATC 57.777 40.909 0.00 0.00 0.00 2.17
20 21 4.097892 AGTTGACGAAGGTTGAAGCAAAAT 59.902 37.500 0.00 0.00 0.00 1.82
21 22 3.442273 AGTTGACGAAGGTTGAAGCAAAA 59.558 39.130 0.00 0.00 0.00 2.44
22 23 3.013921 AGTTGACGAAGGTTGAAGCAAA 58.986 40.909 0.00 0.00 0.00 3.68
23 24 2.639065 AGTTGACGAAGGTTGAAGCAA 58.361 42.857 0.00 0.00 0.00 3.91
24 25 2.325583 AGTTGACGAAGGTTGAAGCA 57.674 45.000 0.00 0.00 0.00 3.91
25 26 3.692791 AAAGTTGACGAAGGTTGAAGC 57.307 42.857 0.00 0.00 0.00 3.86
26 27 3.791353 GCAAAAGTTGACGAAGGTTGAAG 59.209 43.478 0.00 0.00 0.00 3.02
27 28 3.442273 AGCAAAAGTTGACGAAGGTTGAA 59.558 39.130 0.00 0.00 0.00 2.69
28 29 3.013921 AGCAAAAGTTGACGAAGGTTGA 58.986 40.909 0.00 0.00 0.00 3.18
29 30 3.420839 AGCAAAAGTTGACGAAGGTTG 57.579 42.857 0.00 0.00 0.00 3.77
30 31 3.942748 TGTAGCAAAAGTTGACGAAGGTT 59.057 39.130 0.00 0.00 0.00 3.50
31 32 3.537580 TGTAGCAAAAGTTGACGAAGGT 58.462 40.909 0.00 0.00 0.00 3.50
32 33 4.279659 GTTGTAGCAAAAGTTGACGAAGG 58.720 43.478 0.00 0.00 0.00 3.46
33 34 4.201871 TGGTTGTAGCAAAAGTTGACGAAG 60.202 41.667 0.00 0.00 0.00 3.79
34 35 3.690139 TGGTTGTAGCAAAAGTTGACGAA 59.310 39.130 0.00 0.00 0.00 3.85
35 36 3.271729 TGGTTGTAGCAAAAGTTGACGA 58.728 40.909 0.00 0.00 0.00 4.20
36 37 3.684103 TGGTTGTAGCAAAAGTTGACG 57.316 42.857 0.00 0.00 0.00 4.35
37 38 5.458779 GTCATTGGTTGTAGCAAAAGTTGAC 59.541 40.000 7.09 7.09 39.20 3.18
38 39 5.587289 GTCATTGGTTGTAGCAAAAGTTGA 58.413 37.500 0.00 0.00 39.20 3.18
39 40 4.440758 CGTCATTGGTTGTAGCAAAAGTTG 59.559 41.667 0.00 0.00 39.20 3.16
40 41 4.336993 TCGTCATTGGTTGTAGCAAAAGTT 59.663 37.500 0.00 0.00 39.20 2.66
41 42 3.880490 TCGTCATTGGTTGTAGCAAAAGT 59.120 39.130 0.00 0.00 39.20 2.66
42 43 4.213270 TCTCGTCATTGGTTGTAGCAAAAG 59.787 41.667 0.00 0.00 39.20 2.27
43 44 4.130857 TCTCGTCATTGGTTGTAGCAAAA 58.869 39.130 0.00 0.00 39.20 2.44
44 45 3.734463 TCTCGTCATTGGTTGTAGCAAA 58.266 40.909 0.00 0.00 39.20 3.68
45 46 3.394674 TCTCGTCATTGGTTGTAGCAA 57.605 42.857 0.00 0.00 40.12 3.91
46 47 3.394674 TTCTCGTCATTGGTTGTAGCA 57.605 42.857 0.00 0.00 0.00 3.49
47 48 4.154195 ACAATTCTCGTCATTGGTTGTAGC 59.846 41.667 8.24 0.00 36.15 3.58
48 49 5.862924 ACAATTCTCGTCATTGGTTGTAG 57.137 39.130 8.24 0.00 36.15 2.74
49 50 6.706716 TGTAACAATTCTCGTCATTGGTTGTA 59.293 34.615 8.24 0.00 36.15 2.41
50 51 5.529430 TGTAACAATTCTCGTCATTGGTTGT 59.471 36.000 8.24 0.00 36.15 3.32
51 52 5.996219 TGTAACAATTCTCGTCATTGGTTG 58.004 37.500 8.24 0.00 36.15 3.77
52 53 6.435428 GTTGTAACAATTCTCGTCATTGGTT 58.565 36.000 8.24 0.00 36.15 3.67
53 54 5.048991 GGTTGTAACAATTCTCGTCATTGGT 60.049 40.000 8.24 4.93 36.15 3.67
54 55 5.049060 TGGTTGTAACAATTCTCGTCATTGG 60.049 40.000 8.24 0.00 36.15 3.16
55 56 5.996219 TGGTTGTAACAATTCTCGTCATTG 58.004 37.500 0.00 0.00 37.60 2.82
56 57 6.817765 ATGGTTGTAACAATTCTCGTCATT 57.182 33.333 0.00 0.00 0.00 2.57
57 58 6.429692 TCAATGGTTGTAACAATTCTCGTCAT 59.570 34.615 0.00 0.00 30.18 3.06
58 59 5.760743 TCAATGGTTGTAACAATTCTCGTCA 59.239 36.000 0.00 0.00 30.18 4.35
59 60 6.077838 GTCAATGGTTGTAACAATTCTCGTC 58.922 40.000 0.00 0.00 30.18 4.20
60 61 5.333798 CGTCAATGGTTGTAACAATTCTCGT 60.334 40.000 0.00 0.00 30.18 4.18
61 62 5.079406 CGTCAATGGTTGTAACAATTCTCG 58.921 41.667 0.00 0.76 30.18 4.04
62 63 5.997385 ACGTCAATGGTTGTAACAATTCTC 58.003 37.500 0.00 0.00 30.18 2.87
63 64 6.038825 TCAACGTCAATGGTTGTAACAATTCT 59.961 34.615 4.78 0.00 43.93 2.40
64 65 6.202937 TCAACGTCAATGGTTGTAACAATTC 58.797 36.000 4.78 0.00 43.93 2.17
65 66 6.137794 TCAACGTCAATGGTTGTAACAATT 57.862 33.333 4.78 0.00 43.93 2.32
66 67 5.759506 TCAACGTCAATGGTTGTAACAAT 57.240 34.783 4.78 0.00 43.93 2.71
67 68 5.759506 ATCAACGTCAATGGTTGTAACAA 57.240 34.783 4.78 0.00 43.93 2.83
68 69 6.862711 TTATCAACGTCAATGGTTGTAACA 57.137 33.333 4.78 0.00 43.93 2.41
69 70 6.250527 GCATTATCAACGTCAATGGTTGTAAC 59.749 38.462 11.64 0.00 43.93 2.50
70 71 6.318628 GCATTATCAACGTCAATGGTTGTAA 58.681 36.000 11.64 4.23 43.93 2.41
71 72 5.446607 CGCATTATCAACGTCAATGGTTGTA 60.447 40.000 11.64 0.00 43.93 2.41
72 73 4.671508 CGCATTATCAACGTCAATGGTTGT 60.672 41.667 11.64 0.00 43.93 3.32
73 74 3.785521 CGCATTATCAACGTCAATGGTTG 59.214 43.478 11.64 0.00 44.68 3.77
74 75 3.687212 TCGCATTATCAACGTCAATGGTT 59.313 39.130 11.64 0.00 31.68 3.67
75 76 3.266636 TCGCATTATCAACGTCAATGGT 58.733 40.909 11.64 0.00 31.68 3.55
76 77 3.942539 TCGCATTATCAACGTCAATGG 57.057 42.857 11.64 5.15 31.68 3.16
77 78 4.024977 TGGATCGCATTATCAACGTCAATG 60.025 41.667 0.00 0.00 33.69 2.82
78 79 4.024893 GTGGATCGCATTATCAACGTCAAT 60.025 41.667 0.00 0.00 0.00 2.57
79 80 3.308595 GTGGATCGCATTATCAACGTCAA 59.691 43.478 0.00 0.00 0.00 3.18
80 81 2.863740 GTGGATCGCATTATCAACGTCA 59.136 45.455 0.00 0.00 0.00 4.35
81 82 2.863740 TGTGGATCGCATTATCAACGTC 59.136 45.455 0.00 0.00 33.18 4.34
82 83 2.899976 TGTGGATCGCATTATCAACGT 58.100 42.857 0.00 0.00 33.18 3.99
83 84 3.607439 GTTGTGGATCGCATTATCAACG 58.393 45.455 0.00 0.00 33.18 4.10
84 85 3.546020 CCGTTGTGGATCGCATTATCAAC 60.546 47.826 0.00 0.00 42.00 3.18
85 86 2.611751 CCGTTGTGGATCGCATTATCAA 59.388 45.455 0.00 0.00 42.00 2.57
86 87 2.159028 TCCGTTGTGGATCGCATTATCA 60.159 45.455 0.00 0.00 43.74 2.15
87 88 2.479837 TCCGTTGTGGATCGCATTATC 58.520 47.619 0.00 0.00 43.74 1.75
88 89 2.613026 TCCGTTGTGGATCGCATTAT 57.387 45.000 0.00 0.00 43.74 1.28
105 106 0.321653 ACAAAGATGTCGGCACCTCC 60.322 55.000 0.00 0.00 33.41 4.30
106 107 1.197721 CAACAAAGATGTCGGCACCTC 59.802 52.381 0.00 0.00 39.40 3.85
107 108 1.238439 CAACAAAGATGTCGGCACCT 58.762 50.000 0.00 0.00 39.40 4.00
108 109 0.387239 GCAACAAAGATGTCGGCACC 60.387 55.000 0.00 0.00 39.40 5.01
109 110 0.310543 TGCAACAAAGATGTCGGCAC 59.689 50.000 0.00 0.00 41.78 5.01
110 111 1.028130 TTGCAACAAAGATGTCGGCA 58.972 45.000 0.00 0.00 43.64 5.69
111 112 1.408422 GTTGCAACAAAGATGTCGGC 58.592 50.000 24.52 0.00 39.40 5.54
112 113 1.336440 TGGTTGCAACAAAGATGTCGG 59.664 47.619 29.55 0.00 39.40 4.79
113 114 2.772568 TGGTTGCAACAAAGATGTCG 57.227 45.000 29.55 0.00 39.40 4.35
114 115 4.241590 TGATGGTTGCAACAAAGATGTC 57.758 40.909 29.55 13.91 39.40 3.06
115 116 4.616604 CGATGATGGTTGCAACAAAGATGT 60.617 41.667 29.55 4.16 43.14 3.06
116 117 3.855379 CGATGATGGTTGCAACAAAGATG 59.145 43.478 29.55 10.60 0.00 2.90
117 118 3.119388 CCGATGATGGTTGCAACAAAGAT 60.119 43.478 29.55 15.22 0.00 2.40
118 119 2.228582 CCGATGATGGTTGCAACAAAGA 59.771 45.455 29.55 11.03 0.00 2.52
119 120 2.228582 TCCGATGATGGTTGCAACAAAG 59.771 45.455 29.55 13.16 0.00 2.77
120 121 2.234143 TCCGATGATGGTTGCAACAAA 58.766 42.857 29.55 18.08 0.00 2.83
121 122 1.902938 TCCGATGATGGTTGCAACAA 58.097 45.000 29.55 20.93 0.00 2.83
122 123 2.127271 ATCCGATGATGGTTGCAACA 57.873 45.000 29.55 16.61 0.00 3.33
123 124 3.508744 AAATCCGATGATGGTTGCAAC 57.491 42.857 21.59 21.59 0.00 4.17
124 125 4.244066 CAAAAATCCGATGATGGTTGCAA 58.756 39.130 0.00 0.00 0.00 4.08
125 126 3.847542 CAAAAATCCGATGATGGTTGCA 58.152 40.909 0.00 0.00 0.00 4.08
126 127 2.604462 GCAAAAATCCGATGATGGTTGC 59.396 45.455 7.34 7.34 40.97 4.17
127 128 4.114058 AGCAAAAATCCGATGATGGTTG 57.886 40.909 0.00 0.00 32.55 3.77
128 129 4.704540 TGTAGCAAAAATCCGATGATGGTT 59.295 37.500 0.00 0.00 0.00 3.67
129 130 4.269183 TGTAGCAAAAATCCGATGATGGT 58.731 39.130 0.00 0.00 0.00 3.55
130 131 4.898829 TGTAGCAAAAATCCGATGATGG 57.101 40.909 0.00 0.00 0.00 3.51
131 132 5.036737 GGTTGTAGCAAAAATCCGATGATG 58.963 41.667 0.00 0.00 0.00 3.07
132 133 4.949856 AGGTTGTAGCAAAAATCCGATGAT 59.050 37.500 0.00 0.00 0.00 2.45
133 134 4.155826 CAGGTTGTAGCAAAAATCCGATGA 59.844 41.667 0.00 0.00 0.00 2.92
134 135 4.414852 CAGGTTGTAGCAAAAATCCGATG 58.585 43.478 0.00 0.00 0.00 3.84
135 136 3.119495 GCAGGTTGTAGCAAAAATCCGAT 60.119 43.478 0.00 0.00 0.00 4.18
136 137 2.227865 GCAGGTTGTAGCAAAAATCCGA 59.772 45.455 0.00 0.00 0.00 4.55
137 138 2.595386 GCAGGTTGTAGCAAAAATCCG 58.405 47.619 0.00 0.00 0.00 4.18
138 139 2.227865 TCGCAGGTTGTAGCAAAAATCC 59.772 45.455 0.00 0.00 0.00 3.01
139 140 3.552604 TCGCAGGTTGTAGCAAAAATC 57.447 42.857 0.00 0.00 0.00 2.17
140 141 3.305335 CCTTCGCAGGTTGTAGCAAAAAT 60.305 43.478 0.00 0.00 35.06 1.82
141 142 2.034053 CCTTCGCAGGTTGTAGCAAAAA 59.966 45.455 0.00 0.00 35.06 1.94
142 143 1.606668 CCTTCGCAGGTTGTAGCAAAA 59.393 47.619 0.00 0.00 35.06 2.44
143 144 1.202710 TCCTTCGCAGGTTGTAGCAAA 60.203 47.619 0.00 0.00 41.69 3.68
144 145 0.394938 TCCTTCGCAGGTTGTAGCAA 59.605 50.000 0.00 0.00 41.69 3.91
145 146 0.394938 TTCCTTCGCAGGTTGTAGCA 59.605 50.000 0.00 0.00 41.69 3.49
146 147 1.519408 TTTCCTTCGCAGGTTGTAGC 58.481 50.000 0.00 0.00 41.69 3.58
147 148 3.670627 GCAATTTCCTTCGCAGGTTGTAG 60.671 47.826 0.00 0.00 41.69 2.74
148 149 2.227865 GCAATTTCCTTCGCAGGTTGTA 59.772 45.455 0.00 0.00 41.69 2.41
149 150 1.000274 GCAATTTCCTTCGCAGGTTGT 60.000 47.619 0.00 0.00 41.69 3.32
150 151 1.270550 AGCAATTTCCTTCGCAGGTTG 59.729 47.619 0.00 0.00 41.69 3.77
151 152 1.620822 AGCAATTTCCTTCGCAGGTT 58.379 45.000 0.00 0.00 41.69 3.50
152 153 2.084546 GTAGCAATTTCCTTCGCAGGT 58.915 47.619 0.00 0.00 41.69 4.00
153 154 2.083774 TGTAGCAATTTCCTTCGCAGG 58.916 47.619 0.00 0.00 42.50 4.85
154 155 3.492313 GTTGTAGCAATTTCCTTCGCAG 58.508 45.455 0.00 0.00 0.00 5.18
155 156 2.227865 GGTTGTAGCAATTTCCTTCGCA 59.772 45.455 0.00 0.00 0.00 5.10
156 157 2.727916 CGGTTGTAGCAATTTCCTTCGC 60.728 50.000 0.00 0.00 0.00 4.70
157 158 2.159572 CCGGTTGTAGCAATTTCCTTCG 60.160 50.000 0.00 0.00 0.00 3.79
158 159 2.415491 GCCGGTTGTAGCAATTTCCTTC 60.415 50.000 1.90 0.00 0.00 3.46
159 160 1.544246 GCCGGTTGTAGCAATTTCCTT 59.456 47.619 1.90 0.00 0.00 3.36
160 161 1.173913 GCCGGTTGTAGCAATTTCCT 58.826 50.000 1.90 0.00 0.00 3.36
161 162 0.885196 TGCCGGTTGTAGCAATTTCC 59.115 50.000 1.90 0.00 35.69 3.13
162 163 2.715737 TTGCCGGTTGTAGCAATTTC 57.284 45.000 1.90 0.00 43.74 2.17
166 167 2.265182 GCCTTGCCGGTTGTAGCAA 61.265 57.895 1.90 0.00 46.26 3.91
167 168 2.671619 GCCTTGCCGGTTGTAGCA 60.672 61.111 1.90 0.00 37.18 3.49
168 169 3.440415 GGCCTTGCCGGTTGTAGC 61.440 66.667 1.90 0.00 39.62 3.58
211 212 2.124695 GTCGCAACATCCTCCCCC 60.125 66.667 0.00 0.00 0.00 5.40
212 213 2.124695 GGTCGCAACATCCTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
213 214 2.511600 CGGTCGCAACATCCTCCC 60.512 66.667 0.00 0.00 0.00 4.30
214 215 1.810030 GACGGTCGCAACATCCTCC 60.810 63.158 0.00 0.00 0.00 4.30
215 216 2.158959 CGACGGTCGCAACATCCTC 61.159 63.158 18.36 0.00 31.14 3.71
216 217 2.126071 CGACGGTCGCAACATCCT 60.126 61.111 18.36 0.00 31.14 3.24
230 231 3.849953 GCATCAACGACCGGCGAC 61.850 66.667 22.10 0.46 44.57 5.19
248 249 4.933064 CTCTCCCATCGCGGCGTC 62.933 72.222 22.90 0.00 0.00 5.19
251 252 4.292178 CTCCTCTCCCATCGCGGC 62.292 72.222 6.13 0.00 0.00 6.53
252 253 3.610669 CCTCCTCTCCCATCGCGG 61.611 72.222 6.13 0.00 0.00 6.46
253 254 3.610669 CCCTCCTCTCCCATCGCG 61.611 72.222 0.00 0.00 0.00 5.87
254 255 2.123251 TCCCTCCTCTCCCATCGC 60.123 66.667 0.00 0.00 0.00 4.58
255 256 0.105964 TTCTCCCTCCTCTCCCATCG 60.106 60.000 0.00 0.00 0.00 3.84
256 257 1.419381 GTTCTCCCTCCTCTCCCATC 58.581 60.000 0.00 0.00 0.00 3.51
257 258 0.397816 CGTTCTCCCTCCTCTCCCAT 60.398 60.000 0.00 0.00 0.00 4.00
258 259 1.000486 CGTTCTCCCTCCTCTCCCA 60.000 63.158 0.00 0.00 0.00 4.37
259 260 1.758906 CCGTTCTCCCTCCTCTCCC 60.759 68.421 0.00 0.00 0.00 4.30
260 261 0.753848 CTCCGTTCTCCCTCCTCTCC 60.754 65.000 0.00 0.00 0.00 3.71
261 262 0.753848 CCTCCGTTCTCCCTCCTCTC 60.754 65.000 0.00 0.00 0.00 3.20
262 263 1.308326 CCTCCGTTCTCCCTCCTCT 59.692 63.158 0.00 0.00 0.00 3.69
263 264 2.428085 GCCTCCGTTCTCCCTCCTC 61.428 68.421 0.00 0.00 0.00 3.71
264 265 2.364448 GCCTCCGTTCTCCCTCCT 60.364 66.667 0.00 0.00 0.00 3.69
265 266 3.471806 GGCCTCCGTTCTCCCTCC 61.472 72.222 0.00 0.00 0.00 4.30
266 267 3.839432 CGGCCTCCGTTCTCCCTC 61.839 72.222 0.00 0.00 42.73 4.30
282 283 4.077184 TTGTAGCAGACCCGCCCG 62.077 66.667 0.00 0.00 0.00 6.13
283 284 2.436115 GTTGTAGCAGACCCGCCC 60.436 66.667 0.00 0.00 0.00 6.13
284 285 1.741770 CAGTTGTAGCAGACCCGCC 60.742 63.158 0.00 0.00 0.00 6.13
285 286 1.741770 CCAGTTGTAGCAGACCCGC 60.742 63.158 0.00 0.00 0.00 6.13
286 287 1.079127 CCCAGTTGTAGCAGACCCG 60.079 63.158 0.00 0.00 0.00 5.28
287 288 1.299976 CCCCAGTTGTAGCAGACCC 59.700 63.158 0.00 0.00 0.00 4.46
288 289 1.377333 GCCCCAGTTGTAGCAGACC 60.377 63.158 0.00 0.00 0.00 3.85
289 290 0.035056 ATGCCCCAGTTGTAGCAGAC 60.035 55.000 0.00 0.00 38.89 3.51
290 291 0.035152 CATGCCCCAGTTGTAGCAGA 60.035 55.000 0.00 0.00 38.89 4.26
291 292 1.033746 CCATGCCCCAGTTGTAGCAG 61.034 60.000 0.00 0.00 38.89 4.24
292 293 1.001020 CCATGCCCCAGTTGTAGCA 60.001 57.895 0.00 0.00 40.00 3.49
293 294 2.418083 GCCATGCCCCAGTTGTAGC 61.418 63.158 0.00 0.00 0.00 3.58
294 295 2.114670 CGCCATGCCCCAGTTGTAG 61.115 63.158 0.00 0.00 0.00 2.74
295 296 2.045438 CGCCATGCCCCAGTTGTA 60.045 61.111 0.00 0.00 0.00 2.41
296 297 3.965258 TCGCCATGCCCCAGTTGT 61.965 61.111 0.00 0.00 0.00 3.32
297 298 3.443045 GTCGCCATGCCCCAGTTG 61.443 66.667 0.00 0.00 0.00 3.16
303 304 4.830765 TGTAGCGTCGCCATGCCC 62.831 66.667 14.86 0.00 34.73 5.36
304 305 2.395360 TTTGTAGCGTCGCCATGCC 61.395 57.895 14.86 0.00 34.73 4.40
305 306 1.226018 GTTTGTAGCGTCGCCATGC 60.226 57.895 14.86 0.00 34.33 4.06
306 307 0.515127 TTGTTTGTAGCGTCGCCATG 59.485 50.000 14.86 0.00 0.00 3.66
307 308 0.796312 CTTGTTTGTAGCGTCGCCAT 59.204 50.000 14.86 0.00 0.00 4.40
308 309 1.225376 CCTTGTTTGTAGCGTCGCCA 61.225 55.000 14.86 2.35 0.00 5.69
309 310 1.495951 CCTTGTTTGTAGCGTCGCC 59.504 57.895 14.86 0.00 0.00 5.54
310 311 1.154469 GCCTTGTTTGTAGCGTCGC 60.154 57.895 9.80 9.80 0.00 5.19
311 312 0.110823 GTGCCTTGTTTGTAGCGTCG 60.111 55.000 0.00 0.00 0.00 5.12
312 313 0.237498 GGTGCCTTGTTTGTAGCGTC 59.763 55.000 0.00 0.00 0.00 5.19
313 314 0.464735 TGGTGCCTTGTTTGTAGCGT 60.465 50.000 0.00 0.00 0.00 5.07
314 315 0.040425 GTGGTGCCTTGTTTGTAGCG 60.040 55.000 0.00 0.00 0.00 4.26
315 316 0.040425 CGTGGTGCCTTGTTTGTAGC 60.040 55.000 0.00 0.00 0.00 3.58
316 317 1.588674 TCGTGGTGCCTTGTTTGTAG 58.411 50.000 0.00 0.00 0.00 2.74
317 318 2.039818 TTCGTGGTGCCTTGTTTGTA 57.960 45.000 0.00 0.00 0.00 2.41
318 319 1.135228 GTTTCGTGGTGCCTTGTTTGT 60.135 47.619 0.00 0.00 0.00 2.83
319 320 1.135257 TGTTTCGTGGTGCCTTGTTTG 60.135 47.619 0.00 0.00 0.00 2.93
320 321 1.178276 TGTTTCGTGGTGCCTTGTTT 58.822 45.000 0.00 0.00 0.00 2.83
321 322 1.135228 GTTGTTTCGTGGTGCCTTGTT 60.135 47.619 0.00 0.00 0.00 2.83
322 323 0.454196 GTTGTTTCGTGGTGCCTTGT 59.546 50.000 0.00 0.00 0.00 3.16
323 324 0.591236 CGTTGTTTCGTGGTGCCTTG 60.591 55.000 0.00 0.00 0.00 3.61
324 325 0.745128 TCGTTGTTTCGTGGTGCCTT 60.745 50.000 0.00 0.00 0.00 4.35
325 326 0.534203 ATCGTTGTTTCGTGGTGCCT 60.534 50.000 0.00 0.00 0.00 4.75
326 327 0.385473 CATCGTTGTTTCGTGGTGCC 60.385 55.000 0.00 0.00 0.00 5.01
327 328 0.584396 TCATCGTTGTTTCGTGGTGC 59.416 50.000 0.00 0.00 0.00 5.01
328 329 1.398451 GCTCATCGTTGTTTCGTGGTG 60.398 52.381 0.00 0.00 0.00 4.17
329 330 0.865769 GCTCATCGTTGTTTCGTGGT 59.134 50.000 0.00 0.00 0.00 4.16
330 331 0.179250 CGCTCATCGTTGTTTCGTGG 60.179 55.000 0.00 0.00 0.00 4.94
331 332 0.179250 CCGCTCATCGTTGTTTCGTG 60.179 55.000 0.00 0.00 36.19 4.35
332 333 1.289109 CCCGCTCATCGTTGTTTCGT 61.289 55.000 0.00 0.00 36.19 3.85
333 334 1.419922 CCCGCTCATCGTTGTTTCG 59.580 57.895 0.00 0.00 36.19 3.46
334 335 1.134694 GCCCGCTCATCGTTGTTTC 59.865 57.895 0.00 0.00 36.19 2.78
335 336 2.332654 GGCCCGCTCATCGTTGTTT 61.333 57.895 0.00 0.00 36.19 2.83
336 337 2.746277 GGCCCGCTCATCGTTGTT 60.746 61.111 0.00 0.00 36.19 2.83
337 338 3.665675 GAGGCCCGCTCATCGTTGT 62.666 63.158 0.00 0.00 36.19 3.32
338 339 2.892425 GAGGCCCGCTCATCGTTG 60.892 66.667 0.00 0.00 36.19 4.10
339 340 4.514577 CGAGGCCCGCTCATCGTT 62.515 66.667 0.00 0.00 36.19 3.85
352 353 1.678635 TTTTCAGGCCATGGCGAGG 60.679 57.895 29.90 20.76 43.06 4.63
353 354 1.243342 TGTTTTCAGGCCATGGCGAG 61.243 55.000 29.90 23.55 43.06 5.03
354 355 1.228398 TGTTTTCAGGCCATGGCGA 60.228 52.632 29.90 19.76 43.06 5.54
355 356 1.213537 CTGTTTTCAGGCCATGGCG 59.786 57.895 29.90 17.63 43.61 5.69
356 357 0.244721 GTCTGTTTTCAGGCCATGGC 59.755 55.000 29.47 29.47 45.79 4.40
363 364 1.291877 CTCCGCCGTCTGTTTTCAGG 61.292 60.000 0.00 0.00 46.94 3.86
365 366 1.301401 CCTCCGCCGTCTGTTTTCA 60.301 57.895 0.00 0.00 0.00 2.69
366 367 1.005394 TCCTCCGCCGTCTGTTTTC 60.005 57.895 0.00 0.00 0.00 2.29
367 368 1.004918 CTCCTCCGCCGTCTGTTTT 60.005 57.895 0.00 0.00 0.00 2.43
368 369 2.657237 CTCCTCCGCCGTCTGTTT 59.343 61.111 0.00 0.00 0.00 2.83
369 370 3.382832 CCTCCTCCGCCGTCTGTT 61.383 66.667 0.00 0.00 0.00 3.16
376 377 4.459089 GTCACAGCCTCCTCCGCC 62.459 72.222 0.00 0.00 0.00 6.13
377 378 4.803426 CGTCACAGCCTCCTCCGC 62.803 72.222 0.00 0.00 0.00 5.54
378 379 4.135153 CCGTCACAGCCTCCTCCG 62.135 72.222 0.00 0.00 0.00 4.63
379 380 3.775654 CCCGTCACAGCCTCCTCC 61.776 72.222 0.00 0.00 0.00 4.30
380 381 3.775654 CCCCGTCACAGCCTCCTC 61.776 72.222 0.00 0.00 0.00 3.71
381 382 4.316823 TCCCCGTCACAGCCTCCT 62.317 66.667 0.00 0.00 0.00 3.69
382 383 3.775654 CTCCCCGTCACAGCCTCC 61.776 72.222 0.00 0.00 0.00 4.30
383 384 4.459089 GCTCCCCGTCACAGCCTC 62.459 72.222 0.00 0.00 0.00 4.70
385 386 4.767255 CAGCTCCCCGTCACAGCC 62.767 72.222 0.00 0.00 33.28 4.85
395 396 4.200283 CTCCTCGTCGCAGCTCCC 62.200 72.222 0.00 0.00 0.00 4.30
396 397 4.863925 GCTCCTCGTCGCAGCTCC 62.864 72.222 0.00 0.00 0.00 4.70
415 416 4.742201 TTGCTCTCCTCGCACCGC 62.742 66.667 0.00 0.00 37.07 5.68
416 417 2.507992 CTTGCTCTCCTCGCACCG 60.508 66.667 0.00 0.00 37.07 4.94
417 418 2.817396 GCTTGCTCTCCTCGCACC 60.817 66.667 0.00 0.00 37.07 5.01
418 419 3.184683 CGCTTGCTCTCCTCGCAC 61.185 66.667 0.00 0.00 37.07 5.34
419 420 4.441695 CCGCTTGCTCTCCTCGCA 62.442 66.667 0.00 0.00 35.22 5.10
420 421 4.443266 ACCGCTTGCTCTCCTCGC 62.443 66.667 0.00 0.00 0.00 5.03
421 422 2.507992 CACCGCTTGCTCTCCTCG 60.508 66.667 0.00 0.00 0.00 4.63
422 423 2.125350 CCACCGCTTGCTCTCCTC 60.125 66.667 0.00 0.00 0.00 3.71
423 424 2.925170 ACCACCGCTTGCTCTCCT 60.925 61.111 0.00 0.00 0.00 3.69
424 425 2.743928 CACCACCGCTTGCTCTCC 60.744 66.667 0.00 0.00 0.00 3.71
425 426 1.598130 AACACCACCGCTTGCTCTC 60.598 57.895 0.00 0.00 0.00 3.20
426 427 1.893808 CAACACCACCGCTTGCTCT 60.894 57.895 0.00 0.00 0.00 4.09
427 428 2.639286 CAACACCACCGCTTGCTC 59.361 61.111 0.00 0.00 0.00 4.26
428 429 3.595758 GCAACACCACCGCTTGCT 61.596 61.111 0.00 0.00 37.82 3.91
429 430 3.595758 AGCAACACCACCGCTTGC 61.596 61.111 0.00 0.00 40.55 4.01
430 431 2.332514 CAGCAACACCACCGCTTG 59.667 61.111 0.00 0.00 32.48 4.01
431 432 3.595758 GCAGCAACACCACCGCTT 61.596 61.111 0.00 0.00 32.48 4.68
434 435 3.357079 GAGGCAGCAACACCACCG 61.357 66.667 0.00 0.00 0.00 4.94
435 436 2.985847 GGAGGCAGCAACACCACC 60.986 66.667 0.00 0.00 0.00 4.61
436 437 1.589716 GATGGAGGCAGCAACACCAC 61.590 60.000 0.00 0.00 33.38 4.16
437 438 1.303561 GATGGAGGCAGCAACACCA 60.304 57.895 0.00 0.00 35.09 4.17
438 439 2.401766 CGATGGAGGCAGCAACACC 61.402 63.158 0.00 0.00 0.00 4.16
439 440 2.401766 CCGATGGAGGCAGCAACAC 61.402 63.158 0.00 0.00 0.00 3.32
440 441 2.046023 CCGATGGAGGCAGCAACA 60.046 61.111 0.00 0.00 0.00 3.33
441 442 1.817099 CTCCGATGGAGGCAGCAAC 60.817 63.158 4.89 0.00 45.43 4.17
442 443 2.586245 CTCCGATGGAGGCAGCAA 59.414 61.111 4.89 0.00 45.43 3.91
457 458 4.760840 TCGAGTCTGTGCGCGCTC 62.761 66.667 33.29 29.03 0.00 5.03
458 459 4.121669 ATCGAGTCTGTGCGCGCT 62.122 61.111 33.29 10.95 0.00 5.92
459 460 3.906649 CATCGAGTCTGTGCGCGC 61.907 66.667 27.26 27.26 0.00 6.86
460 461 3.250323 CCATCGAGTCTGTGCGCG 61.250 66.667 0.00 0.00 0.00 6.86
461 462 2.161486 GTCCATCGAGTCTGTGCGC 61.161 63.158 0.00 0.00 0.00 6.09
462 463 0.799917 CTGTCCATCGAGTCTGTGCG 60.800 60.000 0.00 0.00 0.00 5.34
463 464 0.528017 TCTGTCCATCGAGTCTGTGC 59.472 55.000 0.00 0.00 0.00 4.57
464 465 1.133982 CCTCTGTCCATCGAGTCTGTG 59.866 57.143 0.00 0.00 0.00 3.66
465 466 1.468985 CCTCTGTCCATCGAGTCTGT 58.531 55.000 0.00 0.00 0.00 3.41
466 467 0.102120 GCCTCTGTCCATCGAGTCTG 59.898 60.000 0.00 0.00 0.00 3.51
467 468 0.323816 TGCCTCTGTCCATCGAGTCT 60.324 55.000 0.00 0.00 0.00 3.24
468 469 0.179124 GTGCCTCTGTCCATCGAGTC 60.179 60.000 0.00 0.00 0.00 3.36
469 470 1.893786 GTGCCTCTGTCCATCGAGT 59.106 57.895 0.00 0.00 0.00 4.18
470 471 1.226802 CGTGCCTCTGTCCATCGAG 60.227 63.158 0.00 0.00 0.00 4.04
471 472 1.248101 TTCGTGCCTCTGTCCATCGA 61.248 55.000 0.00 0.00 0.00 3.59
472 473 0.803768 CTTCGTGCCTCTGTCCATCG 60.804 60.000 0.00 0.00 0.00 3.84
473 474 1.086634 GCTTCGTGCCTCTGTCCATC 61.087 60.000 0.00 0.00 35.15 3.51
474 475 1.078848 GCTTCGTGCCTCTGTCCAT 60.079 57.895 0.00 0.00 35.15 3.41
475 476 2.343758 GCTTCGTGCCTCTGTCCA 59.656 61.111 0.00 0.00 35.15 4.02
476 477 2.811317 CGCTTCGTGCCTCTGTCC 60.811 66.667 0.00 0.00 38.78 4.02
477 478 3.482783 GCGCTTCGTGCCTCTGTC 61.483 66.667 0.00 0.00 38.78 3.51
495 496 3.665675 ATCCCCTCGCGAGCAACAC 62.666 63.158 30.49 0.00 0.00 3.32
496 497 2.463589 AAATCCCCTCGCGAGCAACA 62.464 55.000 30.49 13.65 0.00 3.33
497 498 1.305930 AAAATCCCCTCGCGAGCAAC 61.306 55.000 30.49 0.00 0.00 4.17
498 499 0.608035 AAAAATCCCCTCGCGAGCAA 60.608 50.000 30.49 17.24 0.00 3.91
499 500 1.002624 AAAAATCCCCTCGCGAGCA 60.003 52.632 30.49 16.24 0.00 4.26
500 501 3.905249 AAAAATCCCCTCGCGAGC 58.095 55.556 30.49 0.00 0.00 5.03
522 523 4.685165 GTCTTCTTTCCCTCGTTAGTCAAC 59.315 45.833 0.00 0.00 0.00 3.18
523 524 4.558095 CGTCTTCTTTCCCTCGTTAGTCAA 60.558 45.833 0.00 0.00 0.00 3.18
524 525 3.057736 CGTCTTCTTTCCCTCGTTAGTCA 60.058 47.826 0.00 0.00 0.00 3.41
525 526 3.190118 TCGTCTTCTTTCCCTCGTTAGTC 59.810 47.826 0.00 0.00 0.00 2.59
526 527 3.152341 TCGTCTTCTTTCCCTCGTTAGT 58.848 45.455 0.00 0.00 0.00 2.24
527 528 3.844577 TCGTCTTCTTTCCCTCGTTAG 57.155 47.619 0.00 0.00 0.00 2.34
528 529 3.508793 ACATCGTCTTCTTTCCCTCGTTA 59.491 43.478 0.00 0.00 0.00 3.18
529 530 2.299297 ACATCGTCTTCTTTCCCTCGTT 59.701 45.455 0.00 0.00 0.00 3.85
530 531 1.893801 ACATCGTCTTCTTTCCCTCGT 59.106 47.619 0.00 0.00 0.00 4.18
531 532 2.263077 CACATCGTCTTCTTTCCCTCG 58.737 52.381 0.00 0.00 0.00 4.63
532 533 2.622436 CCACATCGTCTTCTTTCCCTC 58.378 52.381 0.00 0.00 0.00 4.30
533 534 1.279271 CCCACATCGTCTTCTTTCCCT 59.721 52.381 0.00 0.00 0.00 4.20
534 535 1.679032 CCCCACATCGTCTTCTTTCCC 60.679 57.143 0.00 0.00 0.00 3.97
535 536 1.278127 TCCCCACATCGTCTTCTTTCC 59.722 52.381 0.00 0.00 0.00 3.13
536 537 2.742589 GTTCCCCACATCGTCTTCTTTC 59.257 50.000 0.00 0.00 0.00 2.62
537 538 2.552373 GGTTCCCCACATCGTCTTCTTT 60.552 50.000 0.00 0.00 0.00 2.52
538 539 1.003233 GGTTCCCCACATCGTCTTCTT 59.997 52.381 0.00 0.00 0.00 2.52
539 540 0.613777 GGTTCCCCACATCGTCTTCT 59.386 55.000 0.00 0.00 0.00 2.85
540 541 0.739813 CGGTTCCCCACATCGTCTTC 60.740 60.000 0.00 0.00 0.00 2.87
541 542 1.295423 CGGTTCCCCACATCGTCTT 59.705 57.895 0.00 0.00 0.00 3.01
542 543 0.612732 TACGGTTCCCCACATCGTCT 60.613 55.000 0.00 0.00 35.60 4.18
543 544 0.179119 CTACGGTTCCCCACATCGTC 60.179 60.000 0.00 0.00 35.60 4.20
544 545 1.895238 CTACGGTTCCCCACATCGT 59.105 57.895 0.00 0.00 37.78 3.73
545 546 1.520787 GCTACGGTTCCCCACATCG 60.521 63.158 0.00 0.00 0.00 3.84
546 547 1.520787 CGCTACGGTTCCCCACATC 60.521 63.158 0.00 0.00 0.00 3.06
547 548 1.335132 ATCGCTACGGTTCCCCACAT 61.335 55.000 0.00 0.00 0.00 3.21
548 549 1.952102 GATCGCTACGGTTCCCCACA 61.952 60.000 0.00 0.00 0.00 4.17
549 550 1.227176 GATCGCTACGGTTCCCCAC 60.227 63.158 0.00 0.00 0.00 4.61
550 551 2.428925 GGATCGCTACGGTTCCCCA 61.429 63.158 0.00 0.00 0.00 4.96
551 552 2.365095 CTGGATCGCTACGGTTCCCC 62.365 65.000 7.21 0.00 31.85 4.81
552 553 1.067582 CTGGATCGCTACGGTTCCC 59.932 63.158 7.21 0.00 31.85 3.97
553 554 1.591863 GCTGGATCGCTACGGTTCC 60.592 63.158 0.00 3.81 32.88 3.62
554 555 1.944676 CGCTGGATCGCTACGGTTC 60.945 63.158 0.00 0.00 0.00 3.62
555 556 2.104331 CGCTGGATCGCTACGGTT 59.896 61.111 0.00 0.00 0.00 4.44
556 557 3.900892 CCGCTGGATCGCTACGGT 61.901 66.667 6.86 0.00 39.05 4.83
558 559 4.271816 AGCCGCTGGATCGCTACG 62.272 66.667 0.00 0.00 0.00 3.51
559 560 2.659897 CAGCCGCTGGATCGCTAC 60.660 66.667 12.93 0.00 0.00 3.58
560 561 3.138930 GACAGCCGCTGGATCGCTA 62.139 63.158 24.03 0.00 35.51 4.26
561 562 4.521062 GACAGCCGCTGGATCGCT 62.521 66.667 24.03 1.76 35.51 4.93
563 564 4.193334 TCGACAGCCGCTGGATCG 62.193 66.667 24.03 22.54 35.51 3.69
564 565 2.583593 GTCGACAGCCGCTGGATC 60.584 66.667 24.03 12.45 35.51 3.36
565 566 4.498520 CGTCGACAGCCGCTGGAT 62.499 66.667 24.03 4.13 35.51 3.41
573 574 2.583593 GATCTGGCCGTCGACAGC 60.584 66.667 15.50 15.50 34.76 4.40
574 575 2.278206 CGATCTGGCCGTCGACAG 60.278 66.667 17.16 5.18 40.11 3.51
575 576 3.822192 CCGATCTGGCCGTCGACA 61.822 66.667 21.92 0.00 40.11 4.35
576 577 2.938539 CTTCCGATCTGGCCGTCGAC 62.939 65.000 21.92 5.18 40.11 4.20
577 578 2.752640 TTCCGATCTGGCCGTCGA 60.753 61.111 21.92 8.84 40.11 4.20
578 579 2.278857 CTTCCGATCTGGCCGTCG 60.279 66.667 15.59 15.59 37.80 5.12
579 580 2.107141 CCTTCCGATCTGGCCGTC 59.893 66.667 0.00 0.00 37.80 4.79
580 581 2.291043 AACCTTCCGATCTGGCCGT 61.291 57.895 0.00 0.00 37.80 5.68
581 582 1.815421 CAACCTTCCGATCTGGCCG 60.815 63.158 0.00 0.00 37.80 6.13
582 583 1.026718 CACAACCTTCCGATCTGGCC 61.027 60.000 0.00 0.00 37.80 5.36
583 584 1.026718 CCACAACCTTCCGATCTGGC 61.027 60.000 0.00 0.00 37.80 4.85
584 585 0.392998 CCCACAACCTTCCGATCTGG 60.393 60.000 0.00 0.00 40.09 3.86
585 586 1.026718 GCCCACAACCTTCCGATCTG 61.027 60.000 0.00 0.00 0.00 2.90
586 587 1.299976 GCCCACAACCTTCCGATCT 59.700 57.895 0.00 0.00 0.00 2.75
587 588 1.749258 GGCCCACAACCTTCCGATC 60.749 63.158 0.00 0.00 0.00 3.69
588 589 2.355115 GGCCCACAACCTTCCGAT 59.645 61.111 0.00 0.00 0.00 4.18
589 590 4.323477 CGGCCCACAACCTTCCGA 62.323 66.667 0.00 0.00 42.43 4.55
590 591 4.323477 TCGGCCCACAACCTTCCG 62.323 66.667 0.00 0.00 41.30 4.30
591 592 2.671963 GTCGGCCCACAACCTTCC 60.672 66.667 0.00 0.00 0.00 3.46
592 593 1.966451 CAGTCGGCCCACAACCTTC 60.966 63.158 2.46 0.00 0.00 3.46
593 594 2.113139 CAGTCGGCCCACAACCTT 59.887 61.111 2.46 0.00 0.00 3.50
594 595 3.953775 CCAGTCGGCCCACAACCT 61.954 66.667 2.46 0.00 0.00 3.50
604 605 1.591183 CCAAATTTGGGCCAGTCGG 59.409 57.895 26.87 0.36 44.70 4.79
636 637 4.778143 AAAGGCGGGTGCTAGGCG 62.778 66.667 0.00 0.00 42.25 5.52
637 638 2.824489 GAAAGGCGGGTGCTAGGC 60.824 66.667 0.00 0.00 42.25 3.93
638 639 0.394352 ATTGAAAGGCGGGTGCTAGG 60.394 55.000 0.00 0.00 42.25 3.02
639 640 2.325583 TATTGAAAGGCGGGTGCTAG 57.674 50.000 0.00 0.00 42.25 3.42
640 641 2.438021 AGATATTGAAAGGCGGGTGCTA 59.562 45.455 0.00 0.00 42.25 3.49
641 642 1.212935 AGATATTGAAAGGCGGGTGCT 59.787 47.619 0.00 0.00 42.25 4.40
642 643 1.680338 AGATATTGAAAGGCGGGTGC 58.320 50.000 0.00 0.00 41.71 5.01
643 644 2.618709 GGAAGATATTGAAAGGCGGGTG 59.381 50.000 0.00 0.00 0.00 4.61
644 645 2.241176 TGGAAGATATTGAAAGGCGGGT 59.759 45.455 0.00 0.00 0.00 5.28
645 646 2.930950 TGGAAGATATTGAAAGGCGGG 58.069 47.619 0.00 0.00 0.00 6.13
646 647 4.981806 TTTGGAAGATATTGAAAGGCGG 57.018 40.909 0.00 0.00 0.00 6.13
647 648 5.708948 TGTTTTGGAAGATATTGAAAGGCG 58.291 37.500 0.00 0.00 0.00 5.52
648 649 6.591448 CCTTGTTTTGGAAGATATTGAAAGGC 59.409 38.462 0.00 0.00 0.00 4.35
649 650 7.099120 CCCTTGTTTTGGAAGATATTGAAAGG 58.901 38.462 0.00 0.00 0.00 3.11
650 651 6.591448 GCCCTTGTTTTGGAAGATATTGAAAG 59.409 38.462 0.00 0.00 0.00 2.62
674 675 0.901124 ACCAGAGTCCTGACATCTGC 59.099 55.000 15.41 0.00 43.02 4.26
678 679 3.511477 AGTTGTACCAGAGTCCTGACAT 58.489 45.455 0.00 0.00 43.02 3.06
707 708 3.082548 CGACAGTCTAAGTGGAGGAGAA 58.917 50.000 0.00 0.00 0.00 2.87
725 726 0.519961 CCGGTCAATTTGGGTTCGAC 59.480 55.000 0.00 0.00 0.00 4.20
740 741 5.934402 ATTAGTTACTCATCTTGACCGGT 57.066 39.130 6.92 6.92 0.00 5.28
956 1005 3.855668 AGACTAAGGGAGATGGAGATGG 58.144 50.000 0.00 0.00 0.00 3.51
1038 1093 4.927782 AGAACGGCAGCAACGGCA 62.928 61.111 0.00 0.00 44.61 5.69
1146 1221 2.184167 CGGAGTTGGTGGCAACGTT 61.184 57.895 0.00 0.00 39.83 3.99
1147 1222 2.590575 CGGAGTTGGTGGCAACGT 60.591 61.111 0.00 0.00 39.83 3.99
1263 1338 1.150536 GTTGCAGGAACCTGGGACA 59.849 57.895 20.38 8.83 43.77 4.02
1504 1579 1.135972 GTTCACCATGCGACACACATC 60.136 52.381 0.00 0.00 0.00 3.06
1521 1602 1.462541 GCATCACAAGAAGACGCGTTC 60.463 52.381 15.53 8.26 0.00 3.95
1671 1836 9.660180 AGAAGTGAAATTTATTCTAGAGTGGAC 57.340 33.333 9.78 0.00 30.41 4.02
1913 2079 9.292846 AGTTTTTAATACACGGTGAACTTTTTC 57.707 29.630 16.29 0.00 0.00 2.29
2251 2485 0.676782 GAATGGCAGCCACTAACGGT 60.677 55.000 19.10 0.00 35.80 4.83
2257 2491 0.111061 TTCAGTGAATGGCAGCCACT 59.889 50.000 19.10 5.27 41.35 4.00
2278 2512 1.903404 GGGTGGCAAACAGTCCAGG 60.903 63.158 0.00 0.00 32.15 4.45
2297 2531 0.820891 AGCTCATATTTGGCGCCCAG 60.821 55.000 26.77 9.07 33.81 4.45
2353 2597 2.969628 ACAATAGAAGCCTGAGTCCG 57.030 50.000 0.00 0.00 0.00 4.79
2445 2689 1.075536 GTCCAAAACCATCCAGGGACT 59.924 52.381 0.00 0.00 43.89 3.85
2446 2690 1.203001 TGTCCAAAACCATCCAGGGAC 60.203 52.381 0.00 0.00 43.88 4.46
2447 2691 1.075374 CTGTCCAAAACCATCCAGGGA 59.925 52.381 0.00 0.00 43.89 4.20
2448 2692 1.549203 CTGTCCAAAACCATCCAGGG 58.451 55.000 0.00 0.00 43.89 4.45
2449 2693 1.075374 TCCTGTCCAAAACCATCCAGG 59.925 52.381 0.00 0.00 45.67 4.45
2450 2694 2.584835 TCCTGTCCAAAACCATCCAG 57.415 50.000 0.00 0.00 0.00 3.86
2451 2695 3.541242 AATCCTGTCCAAAACCATCCA 57.459 42.857 0.00 0.00 0.00 3.41
2452 2696 5.621329 CGTTAAATCCTGTCCAAAACCATCC 60.621 44.000 0.00 0.00 0.00 3.51
2453 2697 5.048294 ACGTTAAATCCTGTCCAAAACCATC 60.048 40.000 0.00 0.00 0.00 3.51
2454 2698 4.830600 ACGTTAAATCCTGTCCAAAACCAT 59.169 37.500 0.00 0.00 0.00 3.55
2455 2699 4.036971 CACGTTAAATCCTGTCCAAAACCA 59.963 41.667 0.00 0.00 0.00 3.67
2456 2700 4.542735 CACGTTAAATCCTGTCCAAAACC 58.457 43.478 0.00 0.00 0.00 3.27
2457 2701 4.037089 ACCACGTTAAATCCTGTCCAAAAC 59.963 41.667 0.00 0.00 0.00 2.43
2458 2702 4.208746 ACCACGTTAAATCCTGTCCAAAA 58.791 39.130 0.00 0.00 0.00 2.44
2459 2703 3.822940 ACCACGTTAAATCCTGTCCAAA 58.177 40.909 0.00 0.00 0.00 3.28
2460 2704 3.495434 ACCACGTTAAATCCTGTCCAA 57.505 42.857 0.00 0.00 0.00 3.53
2461 2705 3.495434 AACCACGTTAAATCCTGTCCA 57.505 42.857 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.