Multiple sequence alignment - TraesCS1D01G324700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G324700 chr1D 100.000 4848 0 0 1 4848 416840915 416845762 0.000000e+00 8953
1 TraesCS1D01G324700 chr1D 87.921 356 23 2 3975 4312 328875935 328875582 7.560000e-108 401
2 TraesCS1D01G324700 chr1D 87.151 358 25 3 3974 4313 222737760 222737406 2.120000e-103 387
3 TraesCS1D01G324700 chr1A 95.820 4474 133 17 302 4726 514135092 514139560 0.000000e+00 7177
4 TraesCS1D01G324700 chr1A 87.430 358 24 3 3975 4314 425711023 425710669 4.550000e-105 392
5 TraesCS1D01G324700 chr1A 93.243 222 14 1 4094 4314 557927719 557927940 4.680000e-85 326
6 TraesCS1D01G324700 chr1A 91.406 128 9 1 4721 4848 514140136 514140261 1.790000e-39 174
7 TraesCS1D01G324700 chr1B 95.438 3398 146 7 577 3973 563673000 563676389 0.000000e+00 5408
8 TraesCS1D01G324700 chr1B 88.519 540 44 9 4310 4848 563676385 563676907 5.290000e-179 638
9 TraesCS1D01G324700 chr7B 81.950 1590 267 16 1001 2578 750172363 750173944 0.000000e+00 1328
10 TraesCS1D01G324700 chr7B 81.582 1618 276 21 974 2578 750437736 750439344 0.000000e+00 1317
11 TraesCS1D01G324700 chr7B 81.801 1588 270 16 1001 2578 750246440 750248018 0.000000e+00 1314
12 TraesCS1D01G324700 chr7B 79.151 1602 307 23 1001 2587 750322042 750320453 0.000000e+00 1083
13 TraesCS1D01G324700 chr7B 76.889 1562 321 37 1046 2589 750122026 750123565 0.000000e+00 848
14 TraesCS1D01G324700 chr7B 89.735 302 27 3 1 300 695718585 695718884 2.740000e-102 383
15 TraesCS1D01G324700 chr7B 74.971 863 178 26 2841 3678 750319919 750319070 3.570000e-96 363
16 TraesCS1D01G324700 chr7B 75.142 704 146 18 2889 3567 750248317 750249016 2.190000e-78 303
17 TraesCS1D01G324700 chr7B 72.879 778 182 18 2858 3616 720160383 720159616 1.740000e-59 241
18 TraesCS1D01G324700 chr7B 72.739 763 172 24 2886 3618 750174240 750174996 1.760000e-54 224
19 TraesCS1D01G324700 chr7A 81.298 1556 277 9 1037 2586 732936375 732934828 0.000000e+00 1249
20 TraesCS1D01G324700 chr7A 77.939 1582 329 18 1001 2572 733274066 733275637 0.000000e+00 970
21 TraesCS1D01G324700 chr7A 80.935 1070 189 12 1034 2094 732894267 732893204 0.000000e+00 832
22 TraesCS1D01G324700 chr7A 81.128 869 155 8 1715 2578 732922568 732921704 0.000000e+00 688
23 TraesCS1D01G324700 chr7A 96.382 304 7 2 1 301 632742652 632742350 9.370000e-137 497
24 TraesCS1D01G324700 chr7A 96.053 304 8 2 1 301 633122479 633122177 4.360000e-135 492
25 TraesCS1D01G324700 chr7A 87.115 357 27 5 3974 4312 651951130 651950775 2.120000e-103 387
26 TraesCS1D01G324700 chr7A 73.969 849 176 30 2802 3618 732921487 732920652 7.890000e-78 302
27 TraesCS1D01G324700 chr7A 74.665 746 154 22 2901 3618 732934517 732933779 1.020000e-76 298
28 TraesCS1D01G324700 chr3D 97.419 310 7 1 1 309 448529439 448529130 1.200000e-145 527
29 TraesCS1D01G324700 chr3D 88.710 124 11 1 3974 4097 28855811 28855931 1.090000e-31 148
30 TraesCS1D01G324700 chr6A 97.000 300 9 0 1 300 555571776 555572075 5.600000e-139 505
31 TraesCS1D01G324700 chr4D 88.827 358 20 3 3974 4313 310115918 310115563 5.800000e-114 422
32 TraesCS1D01G324700 chr2B 88.643 361 22 6 3973 4314 800132634 800132994 5.800000e-114 422
33 TraesCS1D01G324700 chr2B 91.667 300 24 1 1 299 42599647 42599348 9.710000e-112 414
34 TraesCS1D01G324700 chr2B 87.430 358 26 5 3974 4313 587341153 587341509 1.260000e-105 394
35 TraesCS1D01G324700 chr2B 86.872 358 26 4 3975 4313 772373384 772373029 9.850000e-102 381
36 TraesCS1D01G324700 chr2D 88.674 362 17 6 3974 4313 540321681 540321322 2.090000e-113 420
37 TraesCS1D01G324700 chr3B 89.286 308 29 3 1 306 726179580 726179275 2.740000e-102 383
38 TraesCS1D01G324700 chr6D 86.751 317 23 2 4015 4313 97806492 97806807 7.770000e-88 335
39 TraesCS1D01G324700 chr7D 85.862 290 27 6 3973 4262 154647711 154647436 3.670000e-76 296
40 TraesCS1D01G324700 chr7D 79.695 197 35 5 2886 3079 633671894 633672088 2.350000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G324700 chr1D 416840915 416845762 4847 False 8953.0 8953 100.0000 1 4848 1 chr1D.!!$F1 4847
1 TraesCS1D01G324700 chr1A 514135092 514140261 5169 False 3675.5 7177 93.6130 302 4848 2 chr1A.!!$F2 4546
2 TraesCS1D01G324700 chr1B 563673000 563676907 3907 False 3023.0 5408 91.9785 577 4848 2 chr1B.!!$F1 4271
3 TraesCS1D01G324700 chr7B 750437736 750439344 1608 False 1317.0 1317 81.5820 974 2578 1 chr7B.!!$F3 1604
4 TraesCS1D01G324700 chr7B 750122026 750123565 1539 False 848.0 848 76.8890 1046 2589 1 chr7B.!!$F2 1543
5 TraesCS1D01G324700 chr7B 750246440 750249016 2576 False 808.5 1314 78.4715 1001 3567 2 chr7B.!!$F5 2566
6 TraesCS1D01G324700 chr7B 750172363 750174996 2633 False 776.0 1328 77.3445 1001 3618 2 chr7B.!!$F4 2617
7 TraesCS1D01G324700 chr7B 750319070 750322042 2972 True 723.0 1083 77.0610 1001 3678 2 chr7B.!!$R2 2677
8 TraesCS1D01G324700 chr7B 720159616 720160383 767 True 241.0 241 72.8790 2858 3616 1 chr7B.!!$R1 758
9 TraesCS1D01G324700 chr7A 733274066 733275637 1571 False 970.0 970 77.9390 1001 2572 1 chr7A.!!$F1 1571
10 TraesCS1D01G324700 chr7A 732893204 732894267 1063 True 832.0 832 80.9350 1034 2094 1 chr7A.!!$R4 1060
11 TraesCS1D01G324700 chr7A 732933779 732936375 2596 True 773.5 1249 77.9815 1037 3618 2 chr7A.!!$R6 2581
12 TraesCS1D01G324700 chr7A 732920652 732922568 1916 True 495.0 688 77.5485 1715 3618 2 chr7A.!!$R5 1903

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
199 200 0.035152 CACACAGGCCTGCTAATCCA 60.035 55.000 33.06 0.0 0.00 3.41 F
294 295 0.039035 CCCCGGGTCCTGAAAATTCA 59.961 55.000 21.85 0.0 35.57 2.57 F
295 296 1.341976 CCCCGGGTCCTGAAAATTCAT 60.342 52.381 21.85 0.0 36.46 2.57 F
376 378 1.400494 GCTAAATTGGGTGCGTGTAGG 59.600 52.381 0.00 0.0 0.00 3.18 F
554 573 1.611006 TGTGTGTGTGAGAGAGAGAGC 59.389 52.381 0.00 0.0 0.00 4.09 F
3462 3847 1.594310 TCGTGGCCGAATCATGTCA 59.406 52.632 0.00 0.0 40.86 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1671 1712 4.899502 ACTTTTCAGATACAGTCACCCAG 58.100 43.478 0.0 0.0 0.00 4.45 R
2897 3252 4.649218 GGTAAATGCACCCACCAATTATCT 59.351 41.667 7.4 0.0 31.91 1.98 R
3213 3595 2.827652 CTAATCGCCCAAGAGAAGGTC 58.172 52.381 0.0 0.0 0.00 3.85 R
3462 3847 1.260544 GAAACCCTTTGGCAGAGCAT 58.739 50.000 0.0 0.0 33.59 3.79 R
3573 3958 0.678395 CTATCTGCCTGCATCTCCGT 59.322 55.000 0.0 0.0 0.00 4.69 R
4722 5711 2.094545 GGCCAAATCAGGTTGTCATGTC 60.095 50.000 0.0 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.615582 CTCTCTCATAGTCACATCCTATCTC 57.384 44.000 0.00 0.00 0.00 2.75
25 26 7.328404 TCTCTCATAGTCACATCCTATCTCT 57.672 40.000 0.00 0.00 0.00 3.10
26 27 7.394016 TCTCTCATAGTCACATCCTATCTCTC 58.606 42.308 0.00 0.00 0.00 3.20
27 28 7.237471 TCTCTCATAGTCACATCCTATCTCTCT 59.763 40.741 0.00 0.00 0.00 3.10
28 29 7.394016 TCTCATAGTCACATCCTATCTCTCTC 58.606 42.308 0.00 0.00 0.00 3.20
29 30 7.237471 TCTCATAGTCACATCCTATCTCTCTCT 59.763 40.741 0.00 0.00 0.00 3.10
30 31 7.754624 TCATAGTCACATCCTATCTCTCTCTT 58.245 38.462 0.00 0.00 0.00 2.85
31 32 8.224025 TCATAGTCACATCCTATCTCTCTCTTT 58.776 37.037 0.00 0.00 0.00 2.52
32 33 9.513906 CATAGTCACATCCTATCTCTCTCTTTA 57.486 37.037 0.00 0.00 0.00 1.85
33 34 9.739276 ATAGTCACATCCTATCTCTCTCTTTAG 57.261 37.037 0.00 0.00 0.00 1.85
34 35 7.811282 AGTCACATCCTATCTCTCTCTTTAGA 58.189 38.462 0.00 0.00 0.00 2.10
35 36 8.448008 AGTCACATCCTATCTCTCTCTTTAGAT 58.552 37.037 0.00 0.00 36.45 1.98
36 37 9.077885 GTCACATCCTATCTCTCTCTTTAGATT 57.922 37.037 0.00 0.00 34.36 2.40
37 38 9.653516 TCACATCCTATCTCTCTCTTTAGATTT 57.346 33.333 0.00 0.00 34.36 2.17
77 78 7.488187 TCTTTCTCTAAATATCACATGCAGC 57.512 36.000 0.00 0.00 0.00 5.25
78 79 7.278135 TCTTTCTCTAAATATCACATGCAGCT 58.722 34.615 0.00 0.00 0.00 4.24
79 80 7.772292 TCTTTCTCTAAATATCACATGCAGCTT 59.228 33.333 0.00 0.00 0.00 3.74
80 81 7.488187 TTCTCTAAATATCACATGCAGCTTC 57.512 36.000 0.00 0.00 0.00 3.86
81 82 6.824553 TCTCTAAATATCACATGCAGCTTCT 58.175 36.000 0.00 0.00 0.00 2.85
82 83 6.927936 TCTCTAAATATCACATGCAGCTTCTC 59.072 38.462 0.00 0.00 0.00 2.87
83 84 6.824553 TCTAAATATCACATGCAGCTTCTCT 58.175 36.000 0.00 0.00 0.00 3.10
84 85 6.927936 TCTAAATATCACATGCAGCTTCTCTC 59.072 38.462 0.00 0.00 0.00 3.20
85 86 4.959560 ATATCACATGCAGCTTCTCTCT 57.040 40.909 0.00 0.00 0.00 3.10
86 87 3.630892 ATCACATGCAGCTTCTCTCTT 57.369 42.857 0.00 0.00 0.00 2.85
87 88 2.696506 TCACATGCAGCTTCTCTCTTG 58.303 47.619 0.00 0.00 0.00 3.02
88 89 1.738350 CACATGCAGCTTCTCTCTTGG 59.262 52.381 0.00 0.00 0.00 3.61
89 90 1.627329 ACATGCAGCTTCTCTCTTGGA 59.373 47.619 0.00 0.00 0.00 3.53
90 91 2.239150 ACATGCAGCTTCTCTCTTGGAT 59.761 45.455 0.00 0.00 0.00 3.41
91 92 3.280295 CATGCAGCTTCTCTCTTGGATT 58.720 45.455 0.00 0.00 0.00 3.01
92 93 3.430042 TGCAGCTTCTCTCTTGGATTT 57.570 42.857 0.00 0.00 0.00 2.17
93 94 3.341823 TGCAGCTTCTCTCTTGGATTTC 58.658 45.455 0.00 0.00 0.00 2.17
94 95 2.351111 GCAGCTTCTCTCTTGGATTTCG 59.649 50.000 0.00 0.00 0.00 3.46
95 96 3.854666 CAGCTTCTCTCTTGGATTTCGA 58.145 45.455 0.00 0.00 0.00 3.71
96 97 4.440880 CAGCTTCTCTCTTGGATTTCGAT 58.559 43.478 0.00 0.00 0.00 3.59
97 98 4.507388 CAGCTTCTCTCTTGGATTTCGATC 59.493 45.833 0.00 0.00 0.00 3.69
98 99 4.405358 AGCTTCTCTCTTGGATTTCGATCT 59.595 41.667 0.00 0.00 0.00 2.75
99 100 5.104982 AGCTTCTCTCTTGGATTTCGATCTT 60.105 40.000 0.00 0.00 0.00 2.40
100 101 5.584251 GCTTCTCTCTTGGATTTCGATCTTT 59.416 40.000 0.00 0.00 0.00 2.52
101 102 6.456718 GCTTCTCTCTTGGATTTCGATCTTTG 60.457 42.308 0.00 0.00 0.00 2.77
102 103 6.042638 TCTCTCTTGGATTTCGATCTTTGT 57.957 37.500 0.00 0.00 0.00 2.83
103 104 6.102663 TCTCTCTTGGATTTCGATCTTTGTC 58.897 40.000 0.00 0.00 0.00 3.18
104 105 6.042638 TCTCTTGGATTTCGATCTTTGTCT 57.957 37.500 0.00 0.00 0.00 3.41
105 106 6.467677 TCTCTTGGATTTCGATCTTTGTCTT 58.532 36.000 0.00 0.00 0.00 3.01
106 107 6.936900 TCTCTTGGATTTCGATCTTTGTCTTT 59.063 34.615 0.00 0.00 0.00 2.52
107 108 7.118390 TCTCTTGGATTTCGATCTTTGTCTTTC 59.882 37.037 0.00 0.00 0.00 2.62
108 109 6.936900 TCTTGGATTTCGATCTTTGTCTTTCT 59.063 34.615 0.00 0.00 0.00 2.52
109 110 6.727824 TGGATTTCGATCTTTGTCTTTCTC 57.272 37.500 0.00 0.00 0.00 2.87
110 111 6.467677 TGGATTTCGATCTTTGTCTTTCTCT 58.532 36.000 0.00 0.00 0.00 3.10
111 112 6.936900 TGGATTTCGATCTTTGTCTTTCTCTT 59.063 34.615 0.00 0.00 0.00 2.85
112 113 7.095060 TGGATTTCGATCTTTGTCTTTCTCTTG 60.095 37.037 0.00 0.00 0.00 3.02
113 114 7.095017 GGATTTCGATCTTTGTCTTTCTCTTGT 60.095 37.037 0.00 0.00 0.00 3.16
114 115 6.530913 TTCGATCTTTGTCTTTCTCTTGTG 57.469 37.500 0.00 0.00 0.00 3.33
115 116 5.601662 TCGATCTTTGTCTTTCTCTTGTGT 58.398 37.500 0.00 0.00 0.00 3.72
116 117 5.692204 TCGATCTTTGTCTTTCTCTTGTGTC 59.308 40.000 0.00 0.00 0.00 3.67
117 118 5.463392 CGATCTTTGTCTTTCTCTTGTGTCA 59.537 40.000 0.00 0.00 0.00 3.58
118 119 6.346439 CGATCTTTGTCTTTCTCTTGTGTCAG 60.346 42.308 0.00 0.00 0.00 3.51
119 120 4.572389 TCTTTGTCTTTCTCTTGTGTCAGC 59.428 41.667 0.00 0.00 0.00 4.26
120 121 3.541996 TGTCTTTCTCTTGTGTCAGCA 57.458 42.857 0.00 0.00 0.00 4.41
121 122 3.461061 TGTCTTTCTCTTGTGTCAGCAG 58.539 45.455 0.00 0.00 0.00 4.24
122 123 2.222911 GTCTTTCTCTTGTGTCAGCAGC 59.777 50.000 0.00 0.00 0.00 5.25
123 124 2.103771 TCTTTCTCTTGTGTCAGCAGCT 59.896 45.455 0.00 0.00 0.00 4.24
124 125 1.875009 TTCTCTTGTGTCAGCAGCTG 58.125 50.000 17.10 17.10 0.00 4.24
125 126 0.602106 TCTCTTGTGTCAGCAGCTGC 60.602 55.000 31.53 31.53 42.49 5.25
126 127 0.883370 CTCTTGTGTCAGCAGCTGCA 60.883 55.000 38.24 18.36 45.16 4.41
127 128 0.883370 TCTTGTGTCAGCAGCTGCAG 60.883 55.000 38.24 31.28 45.16 4.41
128 129 1.153107 TTGTGTCAGCAGCTGCAGT 60.153 52.632 38.24 18.36 45.16 4.40
129 130 1.441732 TTGTGTCAGCAGCTGCAGTG 61.442 55.000 38.24 28.32 45.16 3.66
130 131 2.281276 TGTCAGCAGCTGCAGTGG 60.281 61.111 38.24 24.06 45.16 4.00
131 132 3.735029 GTCAGCAGCTGCAGTGGC 61.735 66.667 38.24 26.85 45.16 5.01
150 151 3.574780 GGGCAAGGCTCGTTGTAC 58.425 61.111 0.00 0.00 0.00 2.90
151 152 2.388232 GGGCAAGGCTCGTTGTACG 61.388 63.158 0.00 0.00 44.19 3.67
163 164 4.640805 TCGTTGTACGAGAAATTTCTGC 57.359 40.909 25.12 14.68 46.73 4.26
164 165 4.304110 TCGTTGTACGAGAAATTTCTGCT 58.696 39.130 25.12 11.70 46.73 4.24
165 166 4.748102 TCGTTGTACGAGAAATTTCTGCTT 59.252 37.500 25.12 11.02 46.73 3.91
166 167 4.840772 CGTTGTACGAGAAATTTCTGCTTG 59.159 41.667 25.12 13.60 46.05 4.01
167 168 4.404507 TGTACGAGAAATTTCTGCTTGC 57.595 40.909 25.12 12.18 37.73 4.01
168 169 3.812609 TGTACGAGAAATTTCTGCTTGCA 59.187 39.130 25.12 14.37 37.73 4.08
169 170 3.988379 ACGAGAAATTTCTGCTTGCAA 57.012 38.095 25.12 0.00 37.73 4.08
170 171 4.305989 ACGAGAAATTTCTGCTTGCAAA 57.694 36.364 25.12 0.00 37.73 3.68
171 172 4.681744 ACGAGAAATTTCTGCTTGCAAAA 58.318 34.783 25.12 0.00 37.73 2.44
172 173 5.291971 ACGAGAAATTTCTGCTTGCAAAAT 58.708 33.333 25.12 0.00 37.73 1.82
173 174 5.754890 ACGAGAAATTTCTGCTTGCAAAATT 59.245 32.000 25.12 15.59 37.73 1.82
174 175 6.922957 ACGAGAAATTTCTGCTTGCAAAATTA 59.077 30.769 25.12 0.00 37.73 1.40
175 176 7.096065 ACGAGAAATTTCTGCTTGCAAAATTAC 60.096 33.333 25.12 4.77 37.73 1.89
176 177 7.115378 CGAGAAATTTCTGCTTGCAAAATTACT 59.885 33.333 25.12 0.00 37.73 2.24
177 178 8.080083 AGAAATTTCTGCTTGCAAAATTACTG 57.920 30.769 19.86 0.00 35.89 2.74
178 179 5.851047 ATTTCTGCTTGCAAAATTACTGC 57.149 34.783 0.00 0.00 40.35 4.40
179 180 4.589216 TTCTGCTTGCAAAATTACTGCT 57.411 36.364 0.00 0.00 40.59 4.24
180 181 4.164822 TCTGCTTGCAAAATTACTGCTC 57.835 40.909 0.00 4.42 40.59 4.26
181 182 3.569277 TCTGCTTGCAAAATTACTGCTCA 59.431 39.130 0.00 7.69 40.59 4.26
182 183 3.641648 TGCTTGCAAAATTACTGCTCAC 58.358 40.909 0.00 4.11 40.59 3.51
183 184 3.067883 TGCTTGCAAAATTACTGCTCACA 59.932 39.130 0.00 6.09 40.59 3.58
184 185 3.426525 GCTTGCAAAATTACTGCTCACAC 59.573 43.478 0.00 0.00 40.59 3.82
185 186 4.609947 CTTGCAAAATTACTGCTCACACA 58.390 39.130 0.00 0.00 40.59 3.72
186 187 4.227512 TGCAAAATTACTGCTCACACAG 57.772 40.909 12.28 0.00 43.59 3.66
187 188 3.004629 TGCAAAATTACTGCTCACACAGG 59.995 43.478 12.28 0.00 42.21 4.00
188 189 3.568538 CAAAATTACTGCTCACACAGGC 58.431 45.455 0.00 0.00 42.21 4.85
189 190 1.826385 AATTACTGCTCACACAGGCC 58.174 50.000 0.00 0.00 42.21 5.19
190 191 0.987294 ATTACTGCTCACACAGGCCT 59.013 50.000 0.00 0.00 42.21 5.19
191 192 0.035317 TTACTGCTCACACAGGCCTG 59.965 55.000 31.60 31.60 42.21 4.85
192 193 2.454832 TACTGCTCACACAGGCCTGC 62.455 60.000 33.06 18.12 42.21 4.85
193 194 3.548306 CTGCTCACACAGGCCTGCT 62.548 63.158 33.06 16.98 33.85 4.24
194 195 2.176314 CTGCTCACACAGGCCTGCTA 62.176 60.000 33.06 14.21 33.85 3.49
195 196 1.003355 GCTCACACAGGCCTGCTAA 60.003 57.895 33.06 14.57 0.00 3.09
196 197 0.393537 GCTCACACAGGCCTGCTAAT 60.394 55.000 33.06 10.62 0.00 1.73
197 198 1.661341 CTCACACAGGCCTGCTAATC 58.339 55.000 33.06 0.00 0.00 1.75
198 199 0.253044 TCACACAGGCCTGCTAATCC 59.747 55.000 33.06 0.00 0.00 3.01
199 200 0.035152 CACACAGGCCTGCTAATCCA 60.035 55.000 33.06 0.00 0.00 3.41
200 201 0.698238 ACACAGGCCTGCTAATCCAA 59.302 50.000 33.06 0.00 0.00 3.53
201 202 1.098050 CACAGGCCTGCTAATCCAAC 58.902 55.000 33.06 0.00 0.00 3.77
202 203 0.995024 ACAGGCCTGCTAATCCAACT 59.005 50.000 33.06 5.96 0.00 3.16
203 204 1.340405 ACAGGCCTGCTAATCCAACTG 60.340 52.381 33.06 5.36 0.00 3.16
204 205 0.257039 AGGCCTGCTAATCCAACTGG 59.743 55.000 3.11 0.00 0.00 4.00
205 206 1.387295 GGCCTGCTAATCCAACTGGC 61.387 60.000 0.00 0.00 44.90 4.85
206 207 1.718757 GCCTGCTAATCCAACTGGCG 61.719 60.000 0.00 0.00 38.42 5.69
207 208 1.097547 CCTGCTAATCCAACTGGCGG 61.098 60.000 0.00 0.00 34.44 6.13
208 209 1.718757 CTGCTAATCCAACTGGCGGC 61.719 60.000 0.00 0.00 34.44 6.53
209 210 2.481471 GCTAATCCAACTGGCGGCC 61.481 63.158 13.32 13.32 34.44 6.13
210 211 1.077787 CTAATCCAACTGGCGGCCA 60.078 57.895 22.39 22.39 34.44 5.36
211 212 0.679640 CTAATCCAACTGGCGGCCAA 60.680 55.000 23.94 8.11 30.80 4.52
212 213 0.679640 TAATCCAACTGGCGGCCAAG 60.680 55.000 23.94 18.36 30.80 3.61
213 214 2.424842 AATCCAACTGGCGGCCAAGA 62.425 55.000 23.94 16.78 30.80 3.02
214 215 3.365265 CCAACTGGCGGCCAAGAC 61.365 66.667 23.94 0.00 30.80 3.01
215 216 2.594303 CAACTGGCGGCCAAGACA 60.594 61.111 23.94 0.00 30.80 3.41
227 228 1.915141 CCAAGACAGGGCACAAATCT 58.085 50.000 0.00 0.00 0.00 2.40
228 229 1.815003 CCAAGACAGGGCACAAATCTC 59.185 52.381 0.00 0.00 0.00 2.75
229 230 2.507484 CAAGACAGGGCACAAATCTCA 58.493 47.619 0.00 0.00 0.00 3.27
230 231 2.886523 CAAGACAGGGCACAAATCTCAA 59.113 45.455 0.00 0.00 0.00 3.02
231 232 3.228188 AGACAGGGCACAAATCTCAAA 57.772 42.857 0.00 0.00 0.00 2.69
232 233 3.565307 AGACAGGGCACAAATCTCAAAA 58.435 40.909 0.00 0.00 0.00 2.44
233 234 4.154942 AGACAGGGCACAAATCTCAAAAT 58.845 39.130 0.00 0.00 0.00 1.82
234 235 4.590222 AGACAGGGCACAAATCTCAAAATT 59.410 37.500 0.00 0.00 0.00 1.82
235 236 5.070847 AGACAGGGCACAAATCTCAAAATTT 59.929 36.000 0.00 0.00 0.00 1.82
236 237 6.267471 AGACAGGGCACAAATCTCAAAATTTA 59.733 34.615 0.00 0.00 0.00 1.40
237 238 6.458210 ACAGGGCACAAATCTCAAAATTTAG 58.542 36.000 0.00 0.00 0.00 1.85
238 239 6.041979 ACAGGGCACAAATCTCAAAATTTAGT 59.958 34.615 0.00 0.00 0.00 2.24
239 240 6.930722 CAGGGCACAAATCTCAAAATTTAGTT 59.069 34.615 0.00 0.00 0.00 2.24
240 241 7.442062 CAGGGCACAAATCTCAAAATTTAGTTT 59.558 33.333 0.00 0.00 0.00 2.66
241 242 7.657354 AGGGCACAAATCTCAAAATTTAGTTTC 59.343 33.333 0.00 0.00 0.00 2.78
242 243 7.657354 GGGCACAAATCTCAAAATTTAGTTTCT 59.343 33.333 0.00 0.00 0.00 2.52
243 244 9.045223 GGCACAAATCTCAAAATTTAGTTTCTT 57.955 29.630 0.00 0.00 0.00 2.52
244 245 9.853921 GCACAAATCTCAAAATTTAGTTTCTTG 57.146 29.630 0.00 0.00 0.00 3.02
248 249 9.546428 AAATCTCAAAATTTAGTTTCTTGGTGG 57.454 29.630 0.00 0.00 0.00 4.61
249 250 7.889873 TCTCAAAATTTAGTTTCTTGGTGGA 57.110 32.000 0.00 0.00 0.00 4.02
250 251 8.477419 TCTCAAAATTTAGTTTCTTGGTGGAT 57.523 30.769 0.00 0.00 0.00 3.41
251 252 8.359642 TCTCAAAATTTAGTTTCTTGGTGGATG 58.640 33.333 0.00 0.00 0.00 3.51
252 253 6.928492 TCAAAATTTAGTTTCTTGGTGGATGC 59.072 34.615 0.00 0.00 0.00 3.91
253 254 6.670695 AAATTTAGTTTCTTGGTGGATGCT 57.329 33.333 0.00 0.00 0.00 3.79
254 255 5.904362 ATTTAGTTTCTTGGTGGATGCTC 57.096 39.130 0.00 0.00 0.00 4.26
255 256 2.957402 AGTTTCTTGGTGGATGCTCA 57.043 45.000 0.00 0.00 0.00 4.26
256 257 2.787994 AGTTTCTTGGTGGATGCTCAG 58.212 47.619 0.00 0.00 0.00 3.35
257 258 2.373169 AGTTTCTTGGTGGATGCTCAGA 59.627 45.455 0.00 0.00 0.00 3.27
258 259 3.009916 AGTTTCTTGGTGGATGCTCAGAT 59.990 43.478 0.00 0.00 0.00 2.90
259 260 4.225942 AGTTTCTTGGTGGATGCTCAGATA 59.774 41.667 0.00 0.00 0.00 1.98
260 261 4.842531 TTCTTGGTGGATGCTCAGATAA 57.157 40.909 0.00 0.00 0.00 1.75
261 262 4.412796 TCTTGGTGGATGCTCAGATAAG 57.587 45.455 0.00 0.00 0.00 1.73
262 263 2.627515 TGGTGGATGCTCAGATAAGC 57.372 50.000 0.00 0.00 42.82 3.09
263 264 1.202568 TGGTGGATGCTCAGATAAGCG 60.203 52.381 0.00 0.00 45.54 4.68
264 265 1.506493 GTGGATGCTCAGATAAGCGG 58.494 55.000 0.00 0.00 45.54 5.52
265 266 0.394192 TGGATGCTCAGATAAGCGGG 59.606 55.000 0.00 0.00 45.54 6.13
266 267 0.681733 GGATGCTCAGATAAGCGGGA 59.318 55.000 0.00 0.00 45.54 5.14
267 268 1.337635 GGATGCTCAGATAAGCGGGAG 60.338 57.143 0.00 0.00 45.54 4.30
268 269 1.342819 GATGCTCAGATAAGCGGGAGT 59.657 52.381 0.00 0.00 45.54 3.85
269 270 0.747255 TGCTCAGATAAGCGGGAGTC 59.253 55.000 0.00 0.00 45.54 3.36
270 271 1.036707 GCTCAGATAAGCGGGAGTCT 58.963 55.000 0.00 0.00 31.56 3.24
271 272 2.231529 GCTCAGATAAGCGGGAGTCTA 58.768 52.381 0.00 0.00 31.56 2.59
272 273 2.227865 GCTCAGATAAGCGGGAGTCTAG 59.772 54.545 0.00 0.00 31.56 2.43
273 274 2.817258 CTCAGATAAGCGGGAGTCTAGG 59.183 54.545 0.00 0.00 0.00 3.02
274 275 1.271102 CAGATAAGCGGGAGTCTAGGC 59.729 57.143 0.00 0.00 0.00 3.93
275 276 0.604073 GATAAGCGGGAGTCTAGGCC 59.396 60.000 0.00 0.00 0.00 5.19
276 277 0.832559 ATAAGCGGGAGTCTAGGCCC 60.833 60.000 0.00 0.00 41.11 5.80
277 278 2.941563 TAAGCGGGAGTCTAGGCCCC 62.942 65.000 10.10 10.10 41.50 5.80
282 283 4.477119 GAGTCTAGGCCCCCGGGT 62.477 72.222 21.85 2.42 37.65 5.28
283 284 4.477119 AGTCTAGGCCCCCGGGTC 62.477 72.222 21.85 10.85 40.91 4.46
290 291 3.974293 GCCCCCGGGTCCTGAAAA 61.974 66.667 21.85 0.00 37.65 2.29
291 292 3.096357 CCCCCGGGTCCTGAAAAT 58.904 61.111 21.85 0.00 0.00 1.82
292 293 1.386550 CCCCCGGGTCCTGAAAATT 59.613 57.895 21.85 0.00 0.00 1.82
293 294 0.683179 CCCCCGGGTCCTGAAAATTC 60.683 60.000 21.85 0.00 0.00 2.17
294 295 0.039035 CCCCGGGTCCTGAAAATTCA 59.961 55.000 21.85 0.00 35.57 2.57
295 296 1.341976 CCCCGGGTCCTGAAAATTCAT 60.342 52.381 21.85 0.00 36.46 2.57
296 297 2.456577 CCCGGGTCCTGAAAATTCATT 58.543 47.619 14.18 0.00 36.46 2.57
297 298 2.427095 CCCGGGTCCTGAAAATTCATTC 59.573 50.000 14.18 0.00 36.46 2.67
298 299 3.356290 CCGGGTCCTGAAAATTCATTCT 58.644 45.455 0.00 0.00 36.46 2.40
299 300 3.378427 CCGGGTCCTGAAAATTCATTCTC 59.622 47.826 0.00 0.00 36.46 2.87
300 301 4.265073 CGGGTCCTGAAAATTCATTCTCT 58.735 43.478 0.00 0.00 36.46 3.10
317 318 8.579850 TCATTCTCTAAACCATATTTGTTGCT 57.420 30.769 0.00 0.00 0.00 3.91
376 378 1.400494 GCTAAATTGGGTGCGTGTAGG 59.600 52.381 0.00 0.00 0.00 3.18
387 389 1.644786 GCGTGTAGGCCCATGTTCAC 61.645 60.000 0.00 0.00 0.00 3.18
542 559 3.311322 CACGGTCTAAAATGTGTGTGTGT 59.689 43.478 0.00 0.00 0.00 3.72
554 573 1.611006 TGTGTGTGTGAGAGAGAGAGC 59.389 52.381 0.00 0.00 0.00 4.09
705 724 2.569404 GCCAGGTATGAATCCCCTAGAG 59.431 54.545 0.00 0.00 0.00 2.43
877 896 7.592885 TTAACCATTCTAGCTATCCGTACTT 57.407 36.000 0.00 0.00 0.00 2.24
878 897 5.708877 ACCATTCTAGCTATCCGTACTTC 57.291 43.478 0.00 0.00 0.00 3.01
886 905 5.857822 AGCTATCCGTACTTCAACAAAAC 57.142 39.130 0.00 0.00 0.00 2.43
887 906 5.302360 AGCTATCCGTACTTCAACAAAACA 58.698 37.500 0.00 0.00 0.00 2.83
896 915 7.148787 CCGTACTTCAACAAAACAGTAGAGATC 60.149 40.741 0.00 0.00 0.00 2.75
958 981 5.746245 TGCAGAAGAAATTGGTTACAAAACG 59.254 36.000 0.00 0.00 40.55 3.60
963 986 7.700656 AGAAGAAATTGGTTACAAAACGAAGTG 59.299 33.333 0.00 0.00 39.10 3.16
974 997 5.885881 ACAAAACGAAGTGCACTAATTTGA 58.114 33.333 31.52 0.00 45.00 2.69
1441 1476 3.686016 AGTGTTGTTGACAAGGTTCACT 58.314 40.909 10.34 10.34 40.65 3.41
1452 1487 5.013079 TGACAAGGTTCACTTAGATGGTGAT 59.987 40.000 0.00 0.00 42.26 3.06
1524 1559 7.287512 TGTGATGATTGGTTTTGAAGATGAA 57.712 32.000 0.00 0.00 0.00 2.57
1671 1712 5.580297 TGAACAACACTTTGAGAAAATTGCC 59.420 36.000 0.00 0.00 36.48 4.52
2055 2096 7.255977 GCTCTACCATCATACATAAGGAGAACA 60.256 40.741 0.00 0.00 0.00 3.18
2983 3338 4.041567 TGCCTTCTTCAATAGGACAACTCA 59.958 41.667 0.00 0.00 33.13 3.41
3213 3595 2.614057 GGGCCAGATGAATCAACTAACG 59.386 50.000 4.39 0.00 0.00 3.18
3462 3847 1.594310 TCGTGGCCGAATCATGTCA 59.406 52.632 0.00 0.00 40.86 3.58
3573 3958 1.553690 GGCTCTCCCACCTTGCACTA 61.554 60.000 0.00 0.00 0.00 2.74
3633 4018 0.829990 TGCATGTTCGGCTCCTCATA 59.170 50.000 0.00 0.00 0.00 2.15
3662 4047 1.872952 TGAACTGTTCAATGTGCCTCG 59.127 47.619 20.14 0.00 36.59 4.63
3817 4202 1.592064 TGTGCTCAATTTCTCGTGCA 58.408 45.000 0.00 0.00 0.00 4.57
3956 4343 2.285488 GCATGCTCCGACTTAAAGCTAC 59.715 50.000 11.37 0.00 36.96 3.58
3993 4380 2.019984 CCCCAGAATTAGCTGAAGCAC 58.980 52.381 4.90 0.00 45.16 4.40
4039 4426 3.081061 TCACCCGTGATGAAGGATTTTG 58.919 45.455 0.00 0.00 34.14 2.44
4094 4481 2.099141 TCCAGAGAACCAATGCTTCG 57.901 50.000 0.00 0.00 0.00 3.79
4113 4518 2.513204 CGGGGCTCATCACTGCTG 60.513 66.667 0.00 0.00 0.00 4.41
4118 4523 2.614987 GGGGCTCATCACTGCTGATATC 60.615 54.545 0.00 0.00 35.17 1.63
4131 4536 2.743183 GCTGATATCAAGGAGTTGGCGT 60.743 50.000 6.90 0.00 34.09 5.68
4139 4544 1.301479 GGAGTTGGCGTCGGTCTTT 60.301 57.895 0.00 0.00 0.00 2.52
4142 4547 1.203313 GTTGGCGTCGGTCTTTTCG 59.797 57.895 0.00 0.00 0.00 3.46
4215 4620 5.381184 TCTAGCTAGATCTTGTGAGTCCT 57.619 43.478 19.72 0.00 0.00 3.85
4224 4629 4.100279 TCTTGTGAGTCCTCTAGTGACA 57.900 45.455 14.61 0.05 35.15 3.58
4305 4710 5.348724 TGATCAATAAAGCGCGATATTCCTC 59.651 40.000 12.10 14.23 0.00 3.71
4336 4741 9.802039 AAAATGTAATGGAGTAAACTGGTCTAA 57.198 29.630 0.00 0.00 0.00 2.10
4415 4820 3.827876 TCATTGAGGTGTTGTCTACCGTA 59.172 43.478 0.00 0.00 43.06 4.02
4664 5072 2.506065 CCAACTAGAGGGGAGTCGG 58.494 63.158 0.00 0.00 0.00 4.79
4722 5711 6.371548 TGACAAATTATCCTTTCGAGACCTTG 59.628 38.462 0.00 0.00 0.00 3.61
4726 5715 5.677319 TTATCCTTTCGAGACCTTGACAT 57.323 39.130 0.00 0.00 0.00 3.06
4783 5772 1.775385 TCTGATCCACGGCACATCTA 58.225 50.000 0.00 0.00 0.00 1.98
4784 5773 2.107366 TCTGATCCACGGCACATCTAA 58.893 47.619 0.00 0.00 0.00 2.10
4811 5800 7.618117 TCCTGATAGGTGTCAATTTACTACTGA 59.382 37.037 0.00 0.00 36.53 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.397221 AGAGATAGGATGTGACTATGAGAGAG 58.603 42.308 0.00 0.00 31.58 3.20
1 2 7.237471 AGAGAGATAGGATGTGACTATGAGAGA 59.763 40.741 0.00 0.00 31.58 3.10
2 3 7.397221 AGAGAGATAGGATGTGACTATGAGAG 58.603 42.308 0.00 0.00 31.58 3.20
3 4 7.237471 AGAGAGAGATAGGATGTGACTATGAGA 59.763 40.741 0.00 0.00 31.58 3.27
4 5 7.397221 AGAGAGAGATAGGATGTGACTATGAG 58.603 42.308 0.00 0.00 31.58 2.90
6 7 8.408043 AAAGAGAGAGATAGGATGTGACTATG 57.592 38.462 0.00 0.00 31.58 2.23
7 8 9.739276 CTAAAGAGAGAGATAGGATGTGACTAT 57.261 37.037 0.00 0.00 34.00 2.12
8 9 8.939932 TCTAAAGAGAGAGATAGGATGTGACTA 58.060 37.037 0.00 0.00 0.00 2.59
9 10 7.811282 TCTAAAGAGAGAGATAGGATGTGACT 58.189 38.462 0.00 0.00 0.00 3.41
10 11 8.635765 ATCTAAAGAGAGAGATAGGATGTGAC 57.364 38.462 0.00 0.00 34.35 3.67
11 12 9.653516 AAATCTAAAGAGAGAGATAGGATGTGA 57.346 33.333 0.00 0.00 34.35 3.58
51 52 8.400947 GCTGCATGTGATATTTAGAGAAAGAAA 58.599 33.333 0.00 0.00 0.00 2.52
52 53 7.772292 AGCTGCATGTGATATTTAGAGAAAGAA 59.228 33.333 1.02 0.00 0.00 2.52
53 54 7.278135 AGCTGCATGTGATATTTAGAGAAAGA 58.722 34.615 1.02 0.00 0.00 2.52
54 55 7.493743 AGCTGCATGTGATATTTAGAGAAAG 57.506 36.000 1.02 0.00 0.00 2.62
55 56 7.772292 AGAAGCTGCATGTGATATTTAGAGAAA 59.228 33.333 1.02 0.00 0.00 2.52
56 57 7.278135 AGAAGCTGCATGTGATATTTAGAGAA 58.722 34.615 1.02 0.00 0.00 2.87
57 58 6.824553 AGAAGCTGCATGTGATATTTAGAGA 58.175 36.000 1.02 0.00 0.00 3.10
58 59 6.930164 AGAGAAGCTGCATGTGATATTTAGAG 59.070 38.462 1.02 0.00 0.00 2.43
59 60 6.824553 AGAGAAGCTGCATGTGATATTTAGA 58.175 36.000 1.02 0.00 0.00 2.10
60 61 6.930164 AGAGAGAAGCTGCATGTGATATTTAG 59.070 38.462 1.02 0.00 0.00 1.85
61 62 6.824553 AGAGAGAAGCTGCATGTGATATTTA 58.175 36.000 1.02 0.00 0.00 1.40
62 63 5.682659 AGAGAGAAGCTGCATGTGATATTT 58.317 37.500 1.02 0.00 0.00 1.40
63 64 5.293319 AGAGAGAAGCTGCATGTGATATT 57.707 39.130 1.02 0.00 0.00 1.28
64 65 4.959560 AGAGAGAAGCTGCATGTGATAT 57.040 40.909 1.02 0.00 0.00 1.63
65 66 4.439968 CAAGAGAGAAGCTGCATGTGATA 58.560 43.478 1.02 0.00 0.00 2.15
66 67 3.271729 CAAGAGAGAAGCTGCATGTGAT 58.728 45.455 1.02 0.00 0.00 3.06
67 68 2.614734 CCAAGAGAGAAGCTGCATGTGA 60.615 50.000 1.02 0.00 0.00 3.58
68 69 1.738350 CCAAGAGAGAAGCTGCATGTG 59.262 52.381 1.02 0.00 0.00 3.21
69 70 1.627329 TCCAAGAGAGAAGCTGCATGT 59.373 47.619 1.02 0.00 0.00 3.21
70 71 2.398252 TCCAAGAGAGAAGCTGCATG 57.602 50.000 1.02 0.00 0.00 4.06
71 72 3.648507 AATCCAAGAGAGAAGCTGCAT 57.351 42.857 1.02 0.00 0.00 3.96
72 73 3.341823 GAAATCCAAGAGAGAAGCTGCA 58.658 45.455 1.02 0.00 0.00 4.41
73 74 2.351111 CGAAATCCAAGAGAGAAGCTGC 59.649 50.000 0.00 0.00 0.00 5.25
74 75 3.854666 TCGAAATCCAAGAGAGAAGCTG 58.145 45.455 0.00 0.00 0.00 4.24
75 76 4.405358 AGATCGAAATCCAAGAGAGAAGCT 59.595 41.667 0.00 0.00 31.78 3.74
76 77 4.692228 AGATCGAAATCCAAGAGAGAAGC 58.308 43.478 0.00 0.00 31.78 3.86
77 78 6.593382 ACAAAGATCGAAATCCAAGAGAGAAG 59.407 38.462 0.00 0.00 31.78 2.85
78 79 6.467677 ACAAAGATCGAAATCCAAGAGAGAA 58.532 36.000 0.00 0.00 31.78 2.87
79 80 6.042638 ACAAAGATCGAAATCCAAGAGAGA 57.957 37.500 0.00 0.00 31.78 3.10
80 81 6.105333 AGACAAAGATCGAAATCCAAGAGAG 58.895 40.000 0.00 0.00 31.78 3.20
81 82 6.042638 AGACAAAGATCGAAATCCAAGAGA 57.957 37.500 0.00 0.00 31.78 3.10
82 83 6.734104 AAGACAAAGATCGAAATCCAAGAG 57.266 37.500 0.00 0.00 31.78 2.85
83 84 6.936900 AGAAAGACAAAGATCGAAATCCAAGA 59.063 34.615 0.00 0.00 31.78 3.02
84 85 7.118971 AGAGAAAGACAAAGATCGAAATCCAAG 59.881 37.037 0.00 0.00 31.78 3.61
85 86 6.936900 AGAGAAAGACAAAGATCGAAATCCAA 59.063 34.615 0.00 0.00 31.78 3.53
86 87 6.467677 AGAGAAAGACAAAGATCGAAATCCA 58.532 36.000 0.00 0.00 31.78 3.41
87 88 6.976636 AGAGAAAGACAAAGATCGAAATCC 57.023 37.500 0.00 0.00 31.78 3.01
88 89 7.743838 CACAAGAGAAAGACAAAGATCGAAATC 59.256 37.037 0.00 0.00 0.00 2.17
89 90 7.227512 ACACAAGAGAAAGACAAAGATCGAAAT 59.772 33.333 0.00 0.00 0.00 2.17
90 91 6.538742 ACACAAGAGAAAGACAAAGATCGAAA 59.461 34.615 0.00 0.00 0.00 3.46
91 92 6.049149 ACACAAGAGAAAGACAAAGATCGAA 58.951 36.000 0.00 0.00 0.00 3.71
92 93 5.601662 ACACAAGAGAAAGACAAAGATCGA 58.398 37.500 0.00 0.00 0.00 3.59
93 94 5.463392 TGACACAAGAGAAAGACAAAGATCG 59.537 40.000 0.00 0.00 0.00 3.69
94 95 6.565623 GCTGACACAAGAGAAAGACAAAGATC 60.566 42.308 0.00 0.00 0.00 2.75
95 96 5.238214 GCTGACACAAGAGAAAGACAAAGAT 59.762 40.000 0.00 0.00 0.00 2.40
96 97 4.572389 GCTGACACAAGAGAAAGACAAAGA 59.428 41.667 0.00 0.00 0.00 2.52
97 98 4.333649 TGCTGACACAAGAGAAAGACAAAG 59.666 41.667 0.00 0.00 0.00 2.77
98 99 4.260985 TGCTGACACAAGAGAAAGACAAA 58.739 39.130 0.00 0.00 0.00 2.83
99 100 3.872696 TGCTGACACAAGAGAAAGACAA 58.127 40.909 0.00 0.00 0.00 3.18
100 101 3.461061 CTGCTGACACAAGAGAAAGACA 58.539 45.455 0.00 0.00 0.00 3.41
101 102 2.222911 GCTGCTGACACAAGAGAAAGAC 59.777 50.000 0.00 0.00 0.00 3.01
102 103 2.103771 AGCTGCTGACACAAGAGAAAGA 59.896 45.455 0.00 0.00 0.00 2.52
103 104 2.223611 CAGCTGCTGACACAAGAGAAAG 59.776 50.000 24.88 0.00 32.44 2.62
104 105 2.216046 CAGCTGCTGACACAAGAGAAA 58.784 47.619 24.88 0.00 32.44 2.52
105 106 1.875009 CAGCTGCTGACACAAGAGAA 58.125 50.000 24.88 0.00 32.44 2.87
106 107 0.602106 GCAGCTGCTGACACAAGAGA 60.602 55.000 32.30 0.00 38.21 3.10
107 108 0.883370 TGCAGCTGCTGACACAAGAG 60.883 55.000 36.61 3.57 42.66 2.85
108 109 0.883370 CTGCAGCTGCTGACACAAGA 60.883 55.000 36.61 14.40 41.71 3.02
109 110 1.164662 ACTGCAGCTGCTGACACAAG 61.165 55.000 41.21 28.98 41.71 3.16
110 111 1.153107 ACTGCAGCTGCTGACACAA 60.153 52.632 41.21 20.41 41.71 3.33
111 112 1.890510 CACTGCAGCTGCTGACACA 60.891 57.895 41.21 21.11 41.71 3.72
112 113 2.614446 CCACTGCAGCTGCTGACAC 61.614 63.158 41.21 15.54 41.71 3.67
113 114 2.281276 CCACTGCAGCTGCTGACA 60.281 61.111 41.21 25.20 41.71 3.58
114 115 3.735029 GCCACTGCAGCTGCTGAC 61.735 66.667 41.21 28.23 41.71 3.51
131 132 3.599285 TACAACGAGCCTTGCCCGG 62.599 63.158 0.00 0.00 0.00 5.73
132 133 2.047655 TACAACGAGCCTTGCCCG 60.048 61.111 0.00 0.00 0.00 6.13
133 134 2.388232 CGTACAACGAGCCTTGCCC 61.388 63.158 0.00 0.00 46.05 5.36
134 135 1.373748 TCGTACAACGAGCCTTGCC 60.374 57.895 0.00 0.00 46.73 4.52
135 136 4.255126 TCGTACAACGAGCCTTGC 57.745 55.556 0.00 0.00 46.73 4.01
143 144 4.647291 AGCAGAAATTTCTCGTACAACG 57.353 40.909 17.91 5.72 44.19 4.10
144 145 4.613031 GCAAGCAGAAATTTCTCGTACAAC 59.387 41.667 17.91 1.69 34.74 3.32
145 146 4.274705 TGCAAGCAGAAATTTCTCGTACAA 59.725 37.500 17.91 0.85 34.74 2.41
146 147 3.812609 TGCAAGCAGAAATTTCTCGTACA 59.187 39.130 17.91 9.92 34.74 2.90
147 148 4.404507 TGCAAGCAGAAATTTCTCGTAC 57.595 40.909 17.91 8.10 34.74 3.67
148 149 5.431420 TTTGCAAGCAGAAATTTCTCGTA 57.569 34.783 17.91 4.26 34.74 3.43
149 150 3.988379 TTGCAAGCAGAAATTTCTCGT 57.012 38.095 17.91 5.42 34.74 4.18
150 151 5.834239 ATTTTGCAAGCAGAAATTTCTCG 57.166 34.783 17.91 13.89 34.74 4.04
151 152 8.219105 CAGTAATTTTGCAAGCAGAAATTTCTC 58.781 33.333 17.91 12.45 35.36 2.87
152 153 7.307573 GCAGTAATTTTGCAAGCAGAAATTTCT 60.308 33.333 15.11 15.11 41.17 2.52
153 154 6.793680 GCAGTAATTTTGCAAGCAGAAATTTC 59.206 34.615 21.28 10.33 41.17 2.17
154 155 6.484308 AGCAGTAATTTTGCAAGCAGAAATTT 59.516 30.769 21.28 9.70 43.92 1.82
155 156 5.993441 AGCAGTAATTTTGCAAGCAGAAATT 59.007 32.000 20.56 20.56 43.92 1.82
156 157 5.544650 AGCAGTAATTTTGCAAGCAGAAAT 58.455 33.333 14.63 5.92 43.92 2.17
157 158 4.947645 AGCAGTAATTTTGCAAGCAGAAA 58.052 34.783 14.63 4.01 43.92 2.52
158 159 4.037803 TGAGCAGTAATTTTGCAAGCAGAA 59.962 37.500 14.63 0.31 43.92 3.02
159 160 3.569277 TGAGCAGTAATTTTGCAAGCAGA 59.431 39.130 14.63 0.00 43.92 4.26
160 161 3.671928 GTGAGCAGTAATTTTGCAAGCAG 59.328 43.478 14.63 0.00 43.92 4.24
161 162 3.067883 TGTGAGCAGTAATTTTGCAAGCA 59.932 39.130 14.63 0.00 43.92 3.91
162 163 3.426525 GTGTGAGCAGTAATTTTGCAAGC 59.573 43.478 14.63 0.00 43.92 4.01
163 164 4.609947 TGTGTGAGCAGTAATTTTGCAAG 58.390 39.130 14.63 0.00 43.92 4.01
164 165 4.499526 CCTGTGTGAGCAGTAATTTTGCAA 60.500 41.667 14.63 0.00 43.92 4.08
165 166 3.004629 CCTGTGTGAGCAGTAATTTTGCA 59.995 43.478 14.63 0.00 43.92 4.08
166 167 3.568538 CCTGTGTGAGCAGTAATTTTGC 58.431 45.455 6.53 6.53 41.83 3.68
167 168 3.568538 GCCTGTGTGAGCAGTAATTTTG 58.431 45.455 0.00 0.00 34.84 2.44
168 169 2.558359 GGCCTGTGTGAGCAGTAATTTT 59.442 45.455 0.00 0.00 34.84 1.82
169 170 2.162681 GGCCTGTGTGAGCAGTAATTT 58.837 47.619 0.00 0.00 34.84 1.82
170 171 1.352352 AGGCCTGTGTGAGCAGTAATT 59.648 47.619 3.11 0.00 34.84 1.40
171 172 0.987294 AGGCCTGTGTGAGCAGTAAT 59.013 50.000 3.11 0.00 34.84 1.89
172 173 0.035317 CAGGCCTGTGTGAGCAGTAA 59.965 55.000 25.53 0.00 34.84 2.24
173 174 1.673477 CAGGCCTGTGTGAGCAGTA 59.327 57.895 25.53 0.00 34.84 2.74
174 175 2.429058 CAGGCCTGTGTGAGCAGT 59.571 61.111 25.53 0.00 34.84 4.40
175 176 2.176314 TAGCAGGCCTGTGTGAGCAG 62.176 60.000 32.81 5.54 36.31 4.24
176 177 1.767654 TTAGCAGGCCTGTGTGAGCA 61.768 55.000 32.81 8.55 0.00 4.26
177 178 0.393537 ATTAGCAGGCCTGTGTGAGC 60.394 55.000 32.81 18.21 0.00 4.26
178 179 1.661341 GATTAGCAGGCCTGTGTGAG 58.339 55.000 32.81 7.97 0.00 3.51
179 180 0.253044 GGATTAGCAGGCCTGTGTGA 59.747 55.000 32.81 18.06 0.00 3.58
180 181 0.035152 TGGATTAGCAGGCCTGTGTG 60.035 55.000 32.81 10.20 0.00 3.82
181 182 0.698238 TTGGATTAGCAGGCCTGTGT 59.302 50.000 32.81 22.61 0.00 3.72
182 183 1.098050 GTTGGATTAGCAGGCCTGTG 58.902 55.000 32.81 11.44 0.00 3.66
183 184 0.995024 AGTTGGATTAGCAGGCCTGT 59.005 50.000 32.81 21.44 0.00 4.00
184 185 1.386533 CAGTTGGATTAGCAGGCCTG 58.613 55.000 29.34 29.34 0.00 4.85
185 186 0.257039 CCAGTTGGATTAGCAGGCCT 59.743 55.000 0.00 0.00 37.39 5.19
186 187 1.387295 GCCAGTTGGATTAGCAGGCC 61.387 60.000 1.45 0.00 36.39 5.19
187 188 1.718757 CGCCAGTTGGATTAGCAGGC 61.719 60.000 1.45 0.00 38.54 4.85
188 189 1.097547 CCGCCAGTTGGATTAGCAGG 61.098 60.000 1.45 0.00 37.39 4.85
189 190 1.718757 GCCGCCAGTTGGATTAGCAG 61.719 60.000 1.45 0.00 37.39 4.24
190 191 1.748879 GCCGCCAGTTGGATTAGCA 60.749 57.895 1.45 0.00 37.39 3.49
191 192 2.481471 GGCCGCCAGTTGGATTAGC 61.481 63.158 3.91 0.00 37.39 3.09
192 193 0.679640 TTGGCCGCCAGTTGGATTAG 60.680 55.000 12.95 0.00 37.39 1.73
193 194 0.679640 CTTGGCCGCCAGTTGGATTA 60.680 55.000 12.95 0.00 37.39 1.75
194 195 1.978617 CTTGGCCGCCAGTTGGATT 60.979 57.895 12.95 0.00 37.39 3.01
195 196 2.361610 CTTGGCCGCCAGTTGGAT 60.362 61.111 12.95 0.00 37.39 3.41
196 197 3.565214 TCTTGGCCGCCAGTTGGA 61.565 61.111 12.95 7.22 37.39 3.53
197 198 3.365265 GTCTTGGCCGCCAGTTGG 61.365 66.667 12.95 4.95 33.81 3.77
198 199 2.594303 TGTCTTGGCCGCCAGTTG 60.594 61.111 12.95 7.44 33.81 3.16
199 200 2.281761 CTGTCTTGGCCGCCAGTT 60.282 61.111 12.95 0.00 33.81 3.16
200 201 4.335647 CCTGTCTTGGCCGCCAGT 62.336 66.667 12.95 0.00 33.81 4.00
208 209 1.815003 GAGATTTGTGCCCTGTCTTGG 59.185 52.381 0.00 0.00 0.00 3.61
209 210 2.507484 TGAGATTTGTGCCCTGTCTTG 58.493 47.619 0.00 0.00 0.00 3.02
210 211 2.957402 TGAGATTTGTGCCCTGTCTT 57.043 45.000 0.00 0.00 0.00 3.01
211 212 2.957402 TTGAGATTTGTGCCCTGTCT 57.043 45.000 0.00 0.00 0.00 3.41
212 213 4.525912 ATTTTGAGATTTGTGCCCTGTC 57.474 40.909 0.00 0.00 0.00 3.51
213 214 4.961438 AATTTTGAGATTTGTGCCCTGT 57.039 36.364 0.00 0.00 0.00 4.00
214 215 6.458210 ACTAAATTTTGAGATTTGTGCCCTG 58.542 36.000 6.63 0.00 31.96 4.45
215 216 6.670695 ACTAAATTTTGAGATTTGTGCCCT 57.329 33.333 6.63 0.00 31.96 5.19
216 217 7.657354 AGAAACTAAATTTTGAGATTTGTGCCC 59.343 33.333 6.63 0.00 31.96 5.36
217 218 8.593492 AGAAACTAAATTTTGAGATTTGTGCC 57.407 30.769 6.63 0.00 31.96 5.01
218 219 9.853921 CAAGAAACTAAATTTTGAGATTTGTGC 57.146 29.630 6.63 0.00 31.96 4.57
222 223 9.546428 CCACCAAGAAACTAAATTTTGAGATTT 57.454 29.630 6.63 0.00 33.95 2.17
223 224 8.923270 TCCACCAAGAAACTAAATTTTGAGATT 58.077 29.630 6.63 0.00 0.00 2.40
224 225 8.477419 TCCACCAAGAAACTAAATTTTGAGAT 57.523 30.769 6.63 0.00 0.00 2.75
225 226 7.889873 TCCACCAAGAAACTAAATTTTGAGA 57.110 32.000 6.63 0.00 0.00 3.27
226 227 7.116805 GCATCCACCAAGAAACTAAATTTTGAG 59.883 37.037 6.63 0.00 0.00 3.02
227 228 6.928492 GCATCCACCAAGAAACTAAATTTTGA 59.072 34.615 6.63 0.00 0.00 2.69
228 229 6.930722 AGCATCCACCAAGAAACTAAATTTTG 59.069 34.615 0.00 0.00 0.00 2.44
229 230 7.066307 AGCATCCACCAAGAAACTAAATTTT 57.934 32.000 0.00 0.00 0.00 1.82
230 231 6.267471 TGAGCATCCACCAAGAAACTAAATTT 59.733 34.615 0.00 0.00 0.00 1.82
231 232 5.774690 TGAGCATCCACCAAGAAACTAAATT 59.225 36.000 0.00 0.00 0.00 1.82
232 233 5.324409 TGAGCATCCACCAAGAAACTAAAT 58.676 37.500 0.00 0.00 0.00 1.40
233 234 4.724399 TGAGCATCCACCAAGAAACTAAA 58.276 39.130 0.00 0.00 0.00 1.85
234 235 4.041567 TCTGAGCATCCACCAAGAAACTAA 59.958 41.667 0.00 0.00 0.00 2.24
235 236 3.582647 TCTGAGCATCCACCAAGAAACTA 59.417 43.478 0.00 0.00 0.00 2.24
236 237 2.373169 TCTGAGCATCCACCAAGAAACT 59.627 45.455 0.00 0.00 0.00 2.66
237 238 2.783135 TCTGAGCATCCACCAAGAAAC 58.217 47.619 0.00 0.00 0.00 2.78
238 239 3.726557 ATCTGAGCATCCACCAAGAAA 57.273 42.857 0.00 0.00 0.00 2.52
239 240 4.774124 CTTATCTGAGCATCCACCAAGAA 58.226 43.478 0.00 0.00 0.00 2.52
240 241 3.432749 GCTTATCTGAGCATCCACCAAGA 60.433 47.826 0.00 0.00 42.25 3.02
241 242 2.877168 GCTTATCTGAGCATCCACCAAG 59.123 50.000 0.00 0.00 42.25 3.61
242 243 2.742856 CGCTTATCTGAGCATCCACCAA 60.743 50.000 0.00 0.00 42.83 3.67
243 244 1.202568 CGCTTATCTGAGCATCCACCA 60.203 52.381 0.00 0.00 42.83 4.17
244 245 1.506493 CGCTTATCTGAGCATCCACC 58.494 55.000 0.00 0.00 42.83 4.61
245 246 1.506493 CCGCTTATCTGAGCATCCAC 58.494 55.000 0.00 0.00 42.83 4.02
246 247 0.394192 CCCGCTTATCTGAGCATCCA 59.606 55.000 0.00 0.00 42.83 3.41
247 248 0.681733 TCCCGCTTATCTGAGCATCC 59.318 55.000 0.00 0.00 42.83 3.51
248 249 1.342819 ACTCCCGCTTATCTGAGCATC 59.657 52.381 0.00 0.00 42.83 3.91
249 250 1.342819 GACTCCCGCTTATCTGAGCAT 59.657 52.381 0.00 0.00 42.83 3.79
250 251 0.747255 GACTCCCGCTTATCTGAGCA 59.253 55.000 0.00 0.00 42.83 4.26
251 252 1.036707 AGACTCCCGCTTATCTGAGC 58.963 55.000 0.00 0.00 39.29 4.26
252 253 2.817258 CCTAGACTCCCGCTTATCTGAG 59.183 54.545 0.00 0.00 0.00 3.35
253 254 2.865079 CCTAGACTCCCGCTTATCTGA 58.135 52.381 0.00 0.00 0.00 3.27
254 255 1.271102 GCCTAGACTCCCGCTTATCTG 59.729 57.143 0.00 0.00 0.00 2.90
255 256 1.623163 GCCTAGACTCCCGCTTATCT 58.377 55.000 0.00 0.00 0.00 1.98
256 257 0.604073 GGCCTAGACTCCCGCTTATC 59.396 60.000 0.00 0.00 0.00 1.75
257 258 0.832559 GGGCCTAGACTCCCGCTTAT 60.833 60.000 0.84 0.00 32.00 1.73
258 259 1.457079 GGGCCTAGACTCCCGCTTA 60.457 63.158 0.84 0.00 32.00 3.09
259 260 2.764547 GGGCCTAGACTCCCGCTT 60.765 66.667 0.84 0.00 32.00 4.68
260 261 4.862823 GGGGCCTAGACTCCCGCT 62.863 72.222 0.84 0.00 43.55 5.52
265 266 4.477119 ACCCGGGGGCCTAGACTC 62.477 72.222 27.92 0.00 39.32 3.36
266 267 4.477119 GACCCGGGGGCCTAGACT 62.477 72.222 27.92 0.00 39.32 3.24
273 274 2.798445 AATTTTCAGGACCCGGGGGC 62.798 60.000 27.92 15.89 39.32 5.80
274 275 0.683179 GAATTTTCAGGACCCGGGGG 60.683 60.000 27.92 11.57 42.03 5.40
275 276 0.039035 TGAATTTTCAGGACCCGGGG 59.961 55.000 27.92 12.73 32.50 5.73
276 277 2.143876 ATGAATTTTCAGGACCCGGG 57.856 50.000 22.25 22.25 41.08 5.73
277 278 3.356290 AGAATGAATTTTCAGGACCCGG 58.644 45.455 0.00 0.00 41.08 5.73
278 279 4.265073 AGAGAATGAATTTTCAGGACCCG 58.735 43.478 0.00 0.00 41.08 5.28
279 280 7.363007 GGTTTAGAGAATGAATTTTCAGGACCC 60.363 40.741 0.00 0.00 41.08 4.46
280 281 7.176690 TGGTTTAGAGAATGAATTTTCAGGACC 59.823 37.037 0.00 0.00 41.08 4.46
281 282 8.110860 TGGTTTAGAGAATGAATTTTCAGGAC 57.889 34.615 0.00 0.00 41.08 3.85
282 283 8.884124 ATGGTTTAGAGAATGAATTTTCAGGA 57.116 30.769 0.00 0.00 41.08 3.86
290 291 9.807649 GCAACAAATATGGTTTAGAGAATGAAT 57.192 29.630 0.00 0.00 0.00 2.57
291 292 9.023962 AGCAACAAATATGGTTTAGAGAATGAA 57.976 29.630 0.00 0.00 0.00 2.57
292 293 8.579850 AGCAACAAATATGGTTTAGAGAATGA 57.420 30.769 0.00 0.00 0.00 2.57
355 357 2.080693 CTACACGCACCCAATTTAGCA 58.919 47.619 0.00 0.00 0.00 3.49
376 378 1.066929 GTGGATTTGGTGAACATGGGC 60.067 52.381 0.00 0.00 0.00 5.36
423 425 3.118992 GCAGAAATTGGGAGTTCCATTCC 60.119 47.826 0.00 0.00 46.52 3.01
542 559 2.402572 CCGTGCGCTCTCTCTCTCA 61.403 63.158 9.73 0.00 0.00 3.27
705 724 1.446966 GGAGCAAGAGACTCACGGC 60.447 63.158 5.02 5.14 35.79 5.68
857 876 5.707242 TGAAGTACGGATAGCTAGAATGG 57.293 43.478 0.00 0.00 0.00 3.16
874 893 6.513180 TCGATCTCTACTGTTTTGTTGAAGT 58.487 36.000 0.00 0.00 0.00 3.01
877 896 6.327279 TCTCGATCTCTACTGTTTTGTTGA 57.673 37.500 0.00 0.00 0.00 3.18
878 897 7.588143 ATTCTCGATCTCTACTGTTTTGTTG 57.412 36.000 0.00 0.00 0.00 3.33
942 965 5.289917 GTGCACTTCGTTTTGTAACCAATTT 59.710 36.000 10.32 0.00 0.00 1.82
958 981 4.692625 TCTGCTCTCAAATTAGTGCACTTC 59.307 41.667 27.06 0.00 40.13 3.01
963 986 6.238320 CCTTGTATCTGCTCTCAAATTAGTGC 60.238 42.308 0.00 0.00 36.70 4.40
974 997 3.102972 TGCTCTTCCTTGTATCTGCTCT 58.897 45.455 0.00 0.00 0.00 4.09
1452 1487 7.907389 ACATAAGACCATACTCTTGTTGAGAA 58.093 34.615 0.00 0.00 45.39 2.87
1556 1591 6.279513 AGACAACACTAAGATCCTTCTCTG 57.720 41.667 0.00 0.00 0.00 3.35
1671 1712 4.899502 ACTTTTCAGATACAGTCACCCAG 58.100 43.478 0.00 0.00 0.00 4.45
2897 3252 4.649218 GGTAAATGCACCCACCAATTATCT 59.351 41.667 7.40 0.00 31.91 1.98
3213 3595 2.827652 CTAATCGCCCAAGAGAAGGTC 58.172 52.381 0.00 0.00 0.00 3.85
3462 3847 1.260544 GAAACCCTTTGGCAGAGCAT 58.739 50.000 0.00 0.00 33.59 3.79
3573 3958 0.678395 CTATCTGCCTGCATCTCCGT 59.322 55.000 0.00 0.00 0.00 4.69
3662 4047 9.436957 ACAATGTATTATCATCTTCGGTAATCC 57.563 33.333 0.00 0.00 0.00 3.01
3776 4161 1.546923 TGAGCCGTTAAGTCGATCCAA 59.453 47.619 0.00 0.00 0.00 3.53
3817 4202 2.165437 ACGTTTCACCTGTGCAAAATGT 59.835 40.909 0.00 0.00 0.00 2.71
3852 4237 3.881089 AGATCTTGCGATGAATCATGCAA 59.119 39.130 22.09 22.09 44.34 4.08
3956 4343 4.141181 TCTGGGGTATTTGAGGGAATCATG 60.141 45.833 0.00 0.00 37.89 3.07
4023 4410 3.428045 GCCCTTCAAAATCCTTCATCACG 60.428 47.826 0.00 0.00 0.00 4.35
4039 4426 1.285950 GACTGCAAAACGGCCCTTC 59.714 57.895 0.00 0.00 0.00 3.46
4067 4454 4.333926 GCATTGGTTCTCTGGATAACTGAC 59.666 45.833 0.00 0.00 0.00 3.51
4079 4466 0.721718 CCGTCGAAGCATTGGTTCTC 59.278 55.000 22.25 15.16 37.82 2.87
4094 4481 2.512515 GCAGTGATGAGCCCCGTC 60.513 66.667 0.00 0.00 0.00 4.79
4113 4518 2.128035 CGACGCCAACTCCTTGATATC 58.872 52.381 0.00 0.00 0.00 1.63
4118 4523 2.027625 GACCGACGCCAACTCCTTG 61.028 63.158 0.00 0.00 0.00 3.61
4131 4536 1.762419 CGAACAGACGAAAAGACCGA 58.238 50.000 0.00 0.00 35.09 4.69
4139 4544 3.358707 TGACTAAAGCGAACAGACGAA 57.641 42.857 0.00 0.00 35.09 3.85
4142 4547 6.462073 TTTACATGACTAAAGCGAACAGAC 57.538 37.500 0.00 0.00 0.00 3.51
4181 4586 2.095212 TCTAGCTAGAATATGTGCCGCG 60.095 50.000 21.26 0.00 0.00 6.46
4215 4620 9.431887 GGTTACATGAAAAATAGTGTCACTAGA 57.568 33.333 17.43 0.00 33.66 2.43
4224 4629 5.182169 TCCGGGGTTACATGAAAAATAGT 57.818 39.130 0.00 0.00 0.00 2.12
4289 4694 4.695217 TTTTTGAGGAATATCGCGCTTT 57.305 36.364 5.56 0.00 0.00 3.51
4311 4716 9.449719 CTTAGACCAGTTTACTCCATTACATTT 57.550 33.333 0.00 0.00 0.00 2.32
4336 4741 8.535335 CATTAGATGGAGCACATATAGGTTACT 58.465 37.037 0.00 0.00 40.72 2.24
4536 4941 9.781834 CATTATATTTGCGTTGAAAGGAAGTTA 57.218 29.630 0.00 0.00 0.00 2.24
4658 5066 5.637810 TGTCAGTTTCATATGTTTCCGACTC 59.362 40.000 1.90 0.00 0.00 3.36
4664 5072 6.017109 AGGTGTGTGTCAGTTTCATATGTTTC 60.017 38.462 1.90 0.00 0.00 2.78
4696 5104 6.472887 AGGTCTCGAAAGGATAATTTGTCAA 58.527 36.000 0.00 0.00 0.00 3.18
4722 5711 2.094545 GGCCAAATCAGGTTGTCATGTC 60.095 50.000 0.00 0.00 0.00 3.06
4726 5715 2.380064 AAGGCCAAATCAGGTTGTCA 57.620 45.000 5.01 0.00 0.00 3.58
4783 5772 8.993424 AGTAGTAAATTGACACCTATCAGGATT 58.007 33.333 0.00 0.00 37.67 3.01
4784 5773 8.424918 CAGTAGTAAATTGACACCTATCAGGAT 58.575 37.037 0.00 0.00 37.67 3.24
4811 5800 2.772924 CCCCACCCCAGCTTTGAT 59.227 61.111 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.