Multiple sequence alignment - TraesCS1D01G320900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G320900 chr1D 100.000 2971 0 0 1 2971 414562915 414565885 0.000000e+00 5487.0
1 TraesCS1D01G320900 chr1A 89.665 2148 138 35 871 2971 511446311 511448421 0.000000e+00 2660.0
2 TraesCS1D01G320900 chr1A 95.946 74 3 0 803 876 511446201 511446274 1.450000e-23 121.0
3 TraesCS1D01G320900 chr1B 93.328 1259 52 17 905 2159 560015599 560016829 0.000000e+00 1831.0
4 TraesCS1D01G320900 chr1B 94.360 461 25 1 2512 2971 560017258 560017718 0.000000e+00 706.0
5 TraesCS1D01G320900 chr1B 92.424 330 21 3 2179 2506 560016884 560017211 4.480000e-128 468.0
6 TraesCS1D01G320900 chr1B 86.765 136 18 0 340 475 560014737 560014872 5.130000e-33 152.0
7 TraesCS1D01G320900 chr1B 96.154 52 2 0 546 597 560015212 560015263 5.280000e-13 86.1
8 TraesCS1D01G320900 chr7B 77.982 1199 151 63 1022 2180 732708421 732709546 0.000000e+00 647.0
9 TraesCS1D01G320900 chr7B 81.718 454 49 18 2522 2971 732710910 732711333 6.090000e-92 348.0
10 TraesCS1D01G320900 chr7B 89.811 265 27 0 1058 1322 566484200 566483936 1.020000e-89 340.0
11 TraesCS1D01G320900 chr7B 83.976 337 30 13 2610 2944 732636184 732635870 4.810000e-78 302.0
12 TraesCS1D01G320900 chr7B 86.082 194 20 3 2247 2434 732710070 732710262 5.020000e-48 202.0
13 TraesCS1D01G320900 chr7B 82.278 158 21 4 2285 2437 732709681 732709836 2.400000e-26 130.0
14 TraesCS1D01G320900 chr7D 80.704 824 86 33 1649 2436 629782090 629781304 9.240000e-160 573.0
15 TraesCS1D01G320900 chr7D 83.778 450 50 13 2522 2966 629869647 629870078 3.570000e-109 405.0
16 TraesCS1D01G320900 chr7D 87.683 341 32 7 1646 1980 629867791 629868127 3.590000e-104 388.0
17 TraesCS1D01G320900 chr7D 77.990 577 77 25 1026 1580 629867219 629867767 1.720000e-82 316.0
18 TraesCS1D01G320900 chr7D 85.535 159 13 5 2522 2680 629869059 629869207 1.100000e-34 158.0
19 TraesCS1D01G320900 chr7D 86.957 92 9 2 2336 2424 629868367 629868458 1.880000e-17 100.0
20 TraesCS1D01G320900 chr4B 77.279 779 106 38 1207 1950 298155885 298155143 2.780000e-105 392.0
21 TraesCS1D01G320900 chr4B 88.341 223 25 1 1034 1256 496240866 496241087 1.760000e-67 267.0
22 TraesCS1D01G320900 chr7A 78.628 627 84 26 1022 1616 726000112 726000720 1.300000e-98 370.0
23 TraesCS1D01G320900 chr7A 79.778 450 42 21 2522 2962 726002621 726003030 6.270000e-72 281.0
24 TraesCS1D01G320900 chr7A 84.264 197 22 5 2247 2436 726001758 726001952 1.820000e-42 183.0
25 TraesCS1D01G320900 chr7A 87.586 145 12 1 1226 1364 724187070 724186926 2.370000e-36 163.0
26 TraesCS1D01G320900 chr7A 85.443 158 18 3 2285 2437 726001351 726001508 3.070000e-35 159.0
27 TraesCS1D01G320900 chr7A 88.800 125 13 1 1851 1975 724186565 724186442 5.130000e-33 152.0
28 TraesCS1D01G320900 chr7A 81.513 119 12 5 2000 2110 726001571 726001687 4.080000e-14 89.8
29 TraesCS1D01G320900 chr7A 82.653 98 11 6 91 186 11663731 11663824 6.830000e-12 82.4
30 TraesCS1D01G320900 chr2A 76.518 494 75 25 1476 1950 95076078 95075607 6.400000e-57 231.0
31 TraesCS1D01G320900 chr5B 91.304 138 12 0 630 767 535133114 535133251 3.910000e-44 189.0
32 TraesCS1D01G320900 chr5A 81.778 225 29 6 1756 1980 696290600 696290388 8.460000e-41 178.0
33 TraesCS1D01G320900 chr5A 76.685 356 57 17 1476 1828 633519756 633520088 1.090000e-39 174.0
34 TraesCS1D01G320900 chr6B 90.299 134 13 0 629 762 122790885 122791018 3.040000e-40 176.0
35 TraesCS1D01G320900 chr6D 88.732 142 12 3 635 775 48679421 48679283 1.420000e-38 171.0
36 TraesCS1D01G320900 chr3B 85.621 153 21 1 1210 1362 595621873 595622024 3.070000e-35 159.0
37 TraesCS1D01G320900 chr3B 87.591 137 15 1 1226 1362 595619024 595619158 1.100000e-34 158.0
38 TraesCS1D01G320900 chr3B 77.143 315 28 20 1851 2149 595619352 595619638 3.090000e-30 143.0
39 TraesCS1D01G320900 chr3B 77.070 314 30 23 1851 2149 595622212 595622498 3.090000e-30 143.0
40 TraesCS1D01G320900 chr2D 84.459 148 19 3 630 775 528522423 528522278 3.090000e-30 143.0
41 TraesCS1D01G320900 chr3A 89.855 69 4 3 708 774 125099103 125099036 5.280000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G320900 chr1D 414562915 414565885 2970 False 5487.00 5487 100.0000 1 2971 1 chr1D.!!$F1 2970
1 TraesCS1D01G320900 chr1A 511446201 511448421 2220 False 1390.50 2660 92.8055 803 2971 2 chr1A.!!$F1 2168
2 TraesCS1D01G320900 chr1B 560014737 560017718 2981 False 648.62 1831 92.6062 340 2971 5 chr1B.!!$F1 2631
3 TraesCS1D01G320900 chr7B 732708421 732711333 2912 False 331.75 647 82.0150 1022 2971 4 chr7B.!!$F1 1949
4 TraesCS1D01G320900 chr7D 629781304 629782090 786 True 573.00 573 80.7040 1649 2436 1 chr7D.!!$R1 787
5 TraesCS1D01G320900 chr7D 629867219 629870078 2859 False 273.40 405 84.3886 1026 2966 5 chr7D.!!$F1 1940
6 TraesCS1D01G320900 chr4B 298155143 298155885 742 True 392.00 392 77.2790 1207 1950 1 chr4B.!!$R1 743
7 TraesCS1D01G320900 chr7A 726000112 726003030 2918 False 216.56 370 81.9252 1022 2962 5 chr7A.!!$F2 1940

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
637 954 0.036010 AGTGGTTGAAGGCAGATCGG 60.036 55.0 0.00 0.0 0.00 4.18 F
1364 1865 0.035152 TCCAAGCGCATCAAGGTGAT 60.035 50.0 11.47 0.0 37.65 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1534 2064 0.887933 GAGATCCTCTCGGCCATCTC 59.112 60.0 11.52 11.52 35.04 2.75 R
2281 3792 1.750193 ATCCAAGCCAACATGTACGG 58.250 50.0 0.00 4.08 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.791204 GCAGAAGCAGAAGCAAAAAGC 59.209 47.619 0.00 0.00 45.49 3.51
37 38 3.432007 GCAGAAGCAGAAGCAAAAAGCC 61.432 50.000 0.00 0.00 45.49 4.35
49 50 2.993220 GCAAAAAGCCCAAACGAATAGG 59.007 45.455 0.00 0.00 37.23 2.57
50 51 3.584834 CAAAAAGCCCAAACGAATAGGG 58.415 45.455 0.00 0.00 45.68 3.53
57 58 3.617284 CCCAAACGAATAGGGCTTTAGT 58.383 45.455 0.00 0.00 35.44 2.24
58 59 4.773013 CCCAAACGAATAGGGCTTTAGTA 58.227 43.478 0.00 0.00 35.44 1.82
59 60 5.374071 CCCAAACGAATAGGGCTTTAGTAT 58.626 41.667 0.00 0.00 35.44 2.12
60 61 5.826208 CCCAAACGAATAGGGCTTTAGTATT 59.174 40.000 0.00 0.00 35.44 1.89
61 62 6.320418 CCCAAACGAATAGGGCTTTAGTATTT 59.680 38.462 0.00 0.00 35.44 1.40
62 63 7.193595 CCAAACGAATAGGGCTTTAGTATTTG 58.806 38.462 0.00 0.00 0.00 2.32
63 64 6.937436 AACGAATAGGGCTTTAGTATTTGG 57.063 37.500 0.00 0.00 0.00 3.28
64 65 4.820173 ACGAATAGGGCTTTAGTATTTGGC 59.180 41.667 0.00 0.00 0.00 4.52
65 66 4.084013 CGAATAGGGCTTTAGTATTTGGCG 60.084 45.833 0.00 0.00 0.00 5.69
66 67 4.699925 ATAGGGCTTTAGTATTTGGCGA 57.300 40.909 0.00 0.00 0.00 5.54
67 68 3.359695 AGGGCTTTAGTATTTGGCGAA 57.640 42.857 0.00 0.00 0.00 4.70
68 69 3.692690 AGGGCTTTAGTATTTGGCGAAA 58.307 40.909 0.00 0.00 0.00 3.46
69 70 4.083565 AGGGCTTTAGTATTTGGCGAAAA 58.916 39.130 0.00 0.00 0.00 2.29
70 71 4.525100 AGGGCTTTAGTATTTGGCGAAAAA 59.475 37.500 0.00 0.00 0.00 1.94
90 91 4.844349 AAATAGAGGCAGCTTTAGACCA 57.156 40.909 0.00 0.00 0.00 4.02
91 92 5.379706 AAATAGAGGCAGCTTTAGACCAT 57.620 39.130 0.00 0.00 0.00 3.55
92 93 2.998316 AGAGGCAGCTTTAGACCATC 57.002 50.000 0.00 0.00 0.00 3.51
93 94 2.476199 AGAGGCAGCTTTAGACCATCT 58.524 47.619 0.00 0.00 0.00 2.90
94 95 2.433970 AGAGGCAGCTTTAGACCATCTC 59.566 50.000 0.00 0.00 0.00 2.75
95 96 2.433970 GAGGCAGCTTTAGACCATCTCT 59.566 50.000 0.00 0.00 0.00 3.10
96 97 3.639094 GAGGCAGCTTTAGACCATCTCTA 59.361 47.826 0.00 0.00 0.00 2.43
97 98 4.230455 AGGCAGCTTTAGACCATCTCTAT 58.770 43.478 0.00 0.00 31.11 1.98
98 99 4.040217 AGGCAGCTTTAGACCATCTCTATG 59.960 45.833 0.00 0.00 31.11 2.23
107 108 3.207677 CATCTCTATGGAGGTGCGC 57.792 57.895 6.39 0.00 42.77 6.09
108 109 0.678395 CATCTCTATGGAGGTGCGCT 59.322 55.000 9.73 0.00 42.77 5.92
109 110 1.889170 CATCTCTATGGAGGTGCGCTA 59.111 52.381 9.73 0.00 42.77 4.26
110 111 2.294449 TCTCTATGGAGGTGCGCTAT 57.706 50.000 9.73 0.00 39.86 2.97
111 112 3.434940 TCTCTATGGAGGTGCGCTATA 57.565 47.619 9.73 0.00 39.86 1.31
112 113 3.763057 TCTCTATGGAGGTGCGCTATAA 58.237 45.455 9.73 0.00 39.86 0.98
113 114 4.344978 TCTCTATGGAGGTGCGCTATAAT 58.655 43.478 9.73 0.00 39.86 1.28
114 115 4.399618 TCTCTATGGAGGTGCGCTATAATC 59.600 45.833 9.73 0.00 39.86 1.75
115 116 4.344978 TCTATGGAGGTGCGCTATAATCT 58.655 43.478 9.73 0.00 0.00 2.40
116 117 3.601443 ATGGAGGTGCGCTATAATCTC 57.399 47.619 9.73 2.57 0.00 2.75
117 118 2.316108 TGGAGGTGCGCTATAATCTCA 58.684 47.619 9.73 0.00 0.00 3.27
118 119 2.297315 TGGAGGTGCGCTATAATCTCAG 59.703 50.000 9.73 0.00 0.00 3.35
119 120 2.333014 GAGGTGCGCTATAATCTCAGC 58.667 52.381 9.73 0.00 0.00 4.26
120 121 1.001406 AGGTGCGCTATAATCTCAGCC 59.999 52.381 9.73 0.00 34.15 4.85
121 122 1.001406 GGTGCGCTATAATCTCAGCCT 59.999 52.381 9.73 0.00 34.15 4.58
122 123 2.064762 GTGCGCTATAATCTCAGCCTG 58.935 52.381 9.73 0.00 34.15 4.85
123 124 1.074752 GCGCTATAATCTCAGCCTGC 58.925 55.000 0.00 0.00 34.15 4.85
124 125 1.606480 GCGCTATAATCTCAGCCTGCA 60.606 52.381 0.00 0.00 34.15 4.41
125 126 2.759191 CGCTATAATCTCAGCCTGCAA 58.241 47.619 0.00 0.00 34.15 4.08
126 127 3.133691 CGCTATAATCTCAGCCTGCAAA 58.866 45.455 0.00 0.00 34.15 3.68
127 128 3.561310 CGCTATAATCTCAGCCTGCAAAA 59.439 43.478 0.00 0.00 34.15 2.44
128 129 4.214971 CGCTATAATCTCAGCCTGCAAAAT 59.785 41.667 0.00 0.00 34.15 1.82
129 130 5.616424 CGCTATAATCTCAGCCTGCAAAATC 60.616 44.000 0.00 0.00 34.15 2.17
130 131 4.825546 ATAATCTCAGCCTGCAAAATCG 57.174 40.909 0.00 0.00 0.00 3.34
131 132 2.408271 ATCTCAGCCTGCAAAATCGA 57.592 45.000 0.00 0.00 0.00 3.59
132 133 2.408271 TCTCAGCCTGCAAAATCGAT 57.592 45.000 0.00 0.00 0.00 3.59
133 134 2.715046 TCTCAGCCTGCAAAATCGATT 58.285 42.857 4.39 4.39 0.00 3.34
134 135 3.084039 TCTCAGCCTGCAAAATCGATTT 58.916 40.909 17.60 17.60 0.00 2.17
135 136 4.260985 TCTCAGCCTGCAAAATCGATTTA 58.739 39.130 22.99 7.67 0.00 1.40
136 137 4.094887 TCTCAGCCTGCAAAATCGATTTAC 59.905 41.667 22.99 17.88 0.00 2.01
137 138 3.100817 CAGCCTGCAAAATCGATTTACG 58.899 45.455 22.99 17.50 44.09 3.18
138 139 2.097466 AGCCTGCAAAATCGATTTACGG 59.903 45.455 22.99 20.56 42.82 4.02
139 140 2.159435 GCCTGCAAAATCGATTTACGGT 60.159 45.455 22.99 5.41 42.82 4.83
141 142 4.095610 CCTGCAAAATCGATTTACGGTTC 58.904 43.478 22.99 3.63 45.00 3.62
142 143 3.738399 TGCAAAATCGATTTACGGTTCG 58.262 40.909 22.99 7.71 45.00 3.95
143 144 3.186817 TGCAAAATCGATTTACGGTTCGT 59.813 39.130 22.99 2.80 45.00 3.85
144 145 3.777161 GCAAAATCGATTTACGGTTCGTC 59.223 43.478 22.99 1.68 45.00 4.20
145 146 4.328667 CAAAATCGATTTACGGTTCGTCC 58.671 43.478 22.99 0.00 45.00 4.79
146 147 3.515330 AATCGATTTACGGTTCGTCCT 57.485 42.857 4.39 0.00 41.84 3.85
147 148 4.637483 AATCGATTTACGGTTCGTCCTA 57.363 40.909 4.39 0.00 41.84 2.94
148 149 4.637483 ATCGATTTACGGTTCGTCCTAA 57.363 40.909 0.00 0.00 41.54 2.69
149 150 4.019919 TCGATTTACGGTTCGTCCTAAG 57.980 45.455 0.00 0.00 41.54 2.18
150 151 3.440173 TCGATTTACGGTTCGTCCTAAGT 59.560 43.478 0.00 0.00 41.54 2.24
151 152 3.788163 CGATTTACGGTTCGTCCTAAGTC 59.212 47.826 0.00 0.00 41.54 3.01
152 153 4.672542 CGATTTACGGTTCGTCCTAAGTCA 60.673 45.833 0.00 0.00 41.54 3.41
153 154 4.789012 TTTACGGTTCGTCCTAAGTCAT 57.211 40.909 0.00 0.00 41.54 3.06
154 155 4.789012 TTACGGTTCGTCCTAAGTCATT 57.211 40.909 0.00 0.00 41.54 2.57
155 156 3.672767 ACGGTTCGTCCTAAGTCATTT 57.327 42.857 0.00 0.00 33.69 2.32
156 157 3.999046 ACGGTTCGTCCTAAGTCATTTT 58.001 40.909 0.00 0.00 33.69 1.82
157 158 4.383173 ACGGTTCGTCCTAAGTCATTTTT 58.617 39.130 0.00 0.00 33.69 1.94
158 159 4.212636 ACGGTTCGTCCTAAGTCATTTTTG 59.787 41.667 0.00 0.00 33.69 2.44
159 160 4.473199 GGTTCGTCCTAAGTCATTTTTGC 58.527 43.478 0.00 0.00 0.00 3.68
160 161 4.023536 GGTTCGTCCTAAGTCATTTTTGCA 60.024 41.667 0.00 0.00 0.00 4.08
161 162 5.147162 GTTCGTCCTAAGTCATTTTTGCAG 58.853 41.667 0.00 0.00 0.00 4.41
162 163 3.751175 TCGTCCTAAGTCATTTTTGCAGG 59.249 43.478 0.00 0.00 0.00 4.85
163 164 3.670627 CGTCCTAAGTCATTTTTGCAGGC 60.671 47.826 0.00 0.00 0.00 4.85
164 165 3.255642 GTCCTAAGTCATTTTTGCAGGCA 59.744 43.478 0.00 0.00 0.00 4.75
165 166 4.082026 GTCCTAAGTCATTTTTGCAGGCAT 60.082 41.667 0.00 0.00 0.00 4.40
166 167 4.527816 TCCTAAGTCATTTTTGCAGGCATT 59.472 37.500 0.00 0.00 0.00 3.56
167 168 5.011943 TCCTAAGTCATTTTTGCAGGCATTT 59.988 36.000 0.00 0.00 0.00 2.32
168 169 5.702209 CCTAAGTCATTTTTGCAGGCATTTT 59.298 36.000 0.00 0.00 0.00 1.82
169 170 6.205270 CCTAAGTCATTTTTGCAGGCATTTTT 59.795 34.615 0.00 0.00 0.00 1.94
170 171 5.427036 AGTCATTTTTGCAGGCATTTTTG 57.573 34.783 0.00 0.00 0.00 2.44
171 172 4.276431 AGTCATTTTTGCAGGCATTTTTGG 59.724 37.500 0.00 0.00 0.00 3.28
172 173 3.004524 TCATTTTTGCAGGCATTTTTGGC 59.995 39.130 0.00 0.00 0.00 4.52
178 179 2.126110 GGCATTTTTGGCCCGACG 60.126 61.111 0.00 0.00 45.87 5.12
179 180 2.809174 GCATTTTTGGCCCGACGC 60.809 61.111 0.00 0.00 0.00 5.19
180 181 2.647875 CATTTTTGGCCCGACGCA 59.352 55.556 0.00 0.00 40.31 5.24
181 182 1.006805 CATTTTTGGCCCGACGCAA 60.007 52.632 0.00 0.00 40.31 4.85
182 183 0.598680 CATTTTTGGCCCGACGCAAA 60.599 50.000 0.00 0.00 40.31 3.68
183 184 0.105039 ATTTTTGGCCCGACGCAAAA 59.895 45.000 0.00 7.49 38.70 2.44
184 185 0.806492 TTTTTGGCCCGACGCAAAAC 60.806 50.000 0.00 0.00 40.23 2.43
185 186 1.945354 TTTTGGCCCGACGCAAAACA 61.945 50.000 0.00 0.00 40.23 2.83
186 187 1.739338 TTTGGCCCGACGCAAAACAT 61.739 50.000 0.00 0.00 35.35 2.71
187 188 0.889638 TTGGCCCGACGCAAAACATA 60.890 50.000 0.00 0.00 40.31 2.29
188 189 0.889638 TGGCCCGACGCAAAACATAA 60.890 50.000 0.00 0.00 40.31 1.90
189 190 0.455464 GGCCCGACGCAAAACATAAC 60.455 55.000 0.00 0.00 40.31 1.89
190 191 0.519961 GCCCGACGCAAAACATAACT 59.480 50.000 0.00 0.00 37.47 2.24
191 192 1.733360 GCCCGACGCAAAACATAACTA 59.267 47.619 0.00 0.00 37.47 2.24
192 193 2.160022 GCCCGACGCAAAACATAACTAA 59.840 45.455 0.00 0.00 37.47 2.24
193 194 3.365164 GCCCGACGCAAAACATAACTAAA 60.365 43.478 0.00 0.00 37.47 1.85
194 195 4.399978 CCCGACGCAAAACATAACTAAAG 58.600 43.478 0.00 0.00 0.00 1.85
195 196 4.152759 CCCGACGCAAAACATAACTAAAGA 59.847 41.667 0.00 0.00 0.00 2.52
196 197 5.163794 CCCGACGCAAAACATAACTAAAGAT 60.164 40.000 0.00 0.00 0.00 2.40
197 198 6.311723 CCGACGCAAAACATAACTAAAGATT 58.688 36.000 0.00 0.00 0.00 2.40
198 199 7.413219 CCCGACGCAAAACATAACTAAAGATTA 60.413 37.037 0.00 0.00 0.00 1.75
199 200 7.958567 CCGACGCAAAACATAACTAAAGATTAA 59.041 33.333 0.00 0.00 0.00 1.40
200 201 9.320406 CGACGCAAAACATAACTAAAGATTAAA 57.680 29.630 0.00 0.00 0.00 1.52
210 211 9.736023 CATAACTAAAGATTAAAATGGTCCTGC 57.264 33.333 0.00 0.00 0.00 4.85
211 212 9.700831 ATAACTAAAGATTAAAATGGTCCTGCT 57.299 29.630 0.00 0.00 0.00 4.24
213 214 8.507524 ACTAAAGATTAAAATGGTCCTGCTAC 57.492 34.615 0.00 0.00 0.00 3.58
214 215 8.107095 ACTAAAGATTAAAATGGTCCTGCTACA 58.893 33.333 0.00 0.00 0.00 2.74
215 216 7.961326 AAAGATTAAAATGGTCCTGCTACAT 57.039 32.000 0.00 0.00 0.00 2.29
216 217 7.961326 AAGATTAAAATGGTCCTGCTACATT 57.039 32.000 0.00 0.00 36.46 2.71
217 218 7.961326 AGATTAAAATGGTCCTGCTACATTT 57.039 32.000 0.00 0.00 44.18 2.32
218 219 9.474313 AAGATTAAAATGGTCCTGCTACATTTA 57.526 29.630 0.00 0.00 42.21 1.40
219 220 9.125026 AGATTAAAATGGTCCTGCTACATTTAG 57.875 33.333 0.00 0.00 42.21 1.85
220 221 9.120538 GATTAAAATGGTCCTGCTACATTTAGA 57.879 33.333 0.00 0.00 42.21 2.10
221 222 9.646522 ATTAAAATGGTCCTGCTACATTTAGAT 57.353 29.630 0.00 0.00 42.21 1.98
223 224 8.682936 AAAATGGTCCTGCTACATTTAGATAG 57.317 34.615 0.00 0.00 42.21 2.08
224 225 5.808366 TGGTCCTGCTACATTTAGATAGG 57.192 43.478 4.19 4.19 34.66 2.57
225 226 5.216622 TGGTCCTGCTACATTTAGATAGGT 58.783 41.667 8.58 0.00 34.82 3.08
226 227 5.665812 TGGTCCTGCTACATTTAGATAGGTT 59.334 40.000 8.58 0.00 34.82 3.50
227 228 5.992217 GGTCCTGCTACATTTAGATAGGTTG 59.008 44.000 8.58 0.00 34.82 3.77
228 229 5.992217 GTCCTGCTACATTTAGATAGGTTGG 59.008 44.000 8.58 0.00 34.82 3.77
229 230 5.903010 TCCTGCTACATTTAGATAGGTTGGA 59.097 40.000 8.58 0.00 34.82 3.53
230 231 5.992217 CCTGCTACATTTAGATAGGTTGGAC 59.008 44.000 0.00 0.00 31.35 4.02
231 232 5.925509 TGCTACATTTAGATAGGTTGGACC 58.074 41.667 0.00 0.00 38.99 4.46
243 244 3.015516 TTGGACCTCGCCAAAGTTC 57.984 52.632 0.00 0.00 44.55 3.01
244 245 0.181587 TTGGACCTCGCCAAAGTTCA 59.818 50.000 0.00 0.00 44.55 3.18
245 246 0.534203 TGGACCTCGCCAAAGTTCAC 60.534 55.000 0.00 0.00 34.31 3.18
246 247 0.534203 GGACCTCGCCAAAGTTCACA 60.534 55.000 0.00 0.00 0.00 3.58
247 248 0.586802 GACCTCGCCAAAGTTCACAC 59.413 55.000 0.00 0.00 0.00 3.82
248 249 0.107410 ACCTCGCCAAAGTTCACACA 60.107 50.000 0.00 0.00 0.00 3.72
249 250 0.307760 CCTCGCCAAAGTTCACACAC 59.692 55.000 0.00 0.00 0.00 3.82
250 251 1.013596 CTCGCCAAAGTTCACACACA 58.986 50.000 0.00 0.00 0.00 3.72
251 252 0.730265 TCGCCAAAGTTCACACACAC 59.270 50.000 0.00 0.00 0.00 3.82
252 253 0.449786 CGCCAAAGTTCACACACACA 59.550 50.000 0.00 0.00 0.00 3.72
253 254 1.793714 CGCCAAAGTTCACACACACAC 60.794 52.381 0.00 0.00 0.00 3.82
254 255 1.201181 GCCAAAGTTCACACACACACA 59.799 47.619 0.00 0.00 0.00 3.72
255 256 2.862512 CCAAAGTTCACACACACACAC 58.137 47.619 0.00 0.00 0.00 3.82
256 257 2.227626 CCAAAGTTCACACACACACACA 59.772 45.455 0.00 0.00 0.00 3.72
257 258 3.233578 CAAAGTTCACACACACACACAC 58.766 45.455 0.00 0.00 0.00 3.82
258 259 2.177394 AGTTCACACACACACACACA 57.823 45.000 0.00 0.00 0.00 3.72
259 260 2.076100 AGTTCACACACACACACACAG 58.924 47.619 0.00 0.00 0.00 3.66
260 261 1.804151 GTTCACACACACACACACAGT 59.196 47.619 0.00 0.00 0.00 3.55
261 262 2.177394 TCACACACACACACACAGTT 57.823 45.000 0.00 0.00 0.00 3.16
262 263 2.073056 TCACACACACACACACAGTTC 58.927 47.619 0.00 0.00 0.00 3.01
263 264 1.803555 CACACACACACACACAGTTCA 59.196 47.619 0.00 0.00 0.00 3.18
264 265 2.419673 CACACACACACACACAGTTCAT 59.580 45.455 0.00 0.00 0.00 2.57
265 266 2.677836 ACACACACACACACAGTTCATC 59.322 45.455 0.00 0.00 0.00 2.92
266 267 2.677337 CACACACACACACAGTTCATCA 59.323 45.455 0.00 0.00 0.00 3.07
267 268 2.677836 ACACACACACACAGTTCATCAC 59.322 45.455 0.00 0.00 0.00 3.06
268 269 2.677337 CACACACACACAGTTCATCACA 59.323 45.455 0.00 0.00 0.00 3.58
269 270 2.677836 ACACACACACAGTTCATCACAC 59.322 45.455 0.00 0.00 0.00 3.82
270 271 2.677337 CACACACACAGTTCATCACACA 59.323 45.455 0.00 0.00 0.00 3.72
271 272 3.313249 CACACACACAGTTCATCACACAT 59.687 43.478 0.00 0.00 0.00 3.21
272 273 4.511082 CACACACACAGTTCATCACACATA 59.489 41.667 0.00 0.00 0.00 2.29
273 274 4.511454 ACACACACAGTTCATCACACATAC 59.489 41.667 0.00 0.00 0.00 2.39
274 275 4.511082 CACACACAGTTCATCACACATACA 59.489 41.667 0.00 0.00 0.00 2.29
275 276 4.511454 ACACACAGTTCATCACACATACAC 59.489 41.667 0.00 0.00 0.00 2.90
276 277 4.511082 CACACAGTTCATCACACATACACA 59.489 41.667 0.00 0.00 0.00 3.72
277 278 5.179929 CACACAGTTCATCACACATACACAT 59.820 40.000 0.00 0.00 0.00 3.21
278 279 6.368516 CACACAGTTCATCACACATACACATA 59.631 38.462 0.00 0.00 0.00 2.29
279 280 6.934083 ACACAGTTCATCACACATACACATAA 59.066 34.615 0.00 0.00 0.00 1.90
280 281 7.443879 ACACAGTTCATCACACATACACATAAA 59.556 33.333 0.00 0.00 0.00 1.40
281 282 7.746034 CACAGTTCATCACACATACACATAAAC 59.254 37.037 0.00 0.00 0.00 2.01
282 283 7.443879 ACAGTTCATCACACATACACATAAACA 59.556 33.333 0.00 0.00 0.00 2.83
283 284 8.453320 CAGTTCATCACACATACACATAAACAT 58.547 33.333 0.00 0.00 0.00 2.71
284 285 9.665719 AGTTCATCACACATACACATAAACATA 57.334 29.630 0.00 0.00 0.00 2.29
285 286 9.702726 GTTCATCACACATACACATAAACATAC 57.297 33.333 0.00 0.00 0.00 2.39
286 287 9.665719 TTCATCACACATACACATAAACATACT 57.334 29.630 0.00 0.00 0.00 2.12
298 299 8.861086 ACACATAAACATACTACTAGATGGAGG 58.139 37.037 0.00 0.00 0.00 4.30
299 300 8.307483 CACATAAACATACTACTAGATGGAGGG 58.693 40.741 0.00 0.00 0.00 4.30
300 301 5.810080 AAACATACTACTAGATGGAGGGC 57.190 43.478 0.00 0.00 0.00 5.19
301 302 4.471078 ACATACTACTAGATGGAGGGCA 57.529 45.455 0.00 0.00 0.00 5.36
302 303 4.411927 ACATACTACTAGATGGAGGGCAG 58.588 47.826 0.00 0.00 0.00 4.85
303 304 4.140900 ACATACTACTAGATGGAGGGCAGT 60.141 45.833 0.00 0.00 0.00 4.40
304 305 2.672098 ACTACTAGATGGAGGGCAGTG 58.328 52.381 0.00 0.00 0.00 3.66
305 306 1.967066 CTACTAGATGGAGGGCAGTGG 59.033 57.143 0.00 0.00 0.00 4.00
306 307 0.043334 ACTAGATGGAGGGCAGTGGT 59.957 55.000 0.00 0.00 0.00 4.16
307 308 0.467384 CTAGATGGAGGGCAGTGGTG 59.533 60.000 0.00 0.00 0.00 4.17
308 309 0.982852 TAGATGGAGGGCAGTGGTGG 60.983 60.000 0.00 0.00 0.00 4.61
317 318 3.129502 CAGTGGTGGCGGCTCATG 61.130 66.667 11.43 3.21 0.00 3.07
318 319 4.415150 AGTGGTGGCGGCTCATGG 62.415 66.667 11.43 0.00 0.00 3.66
322 323 3.512516 GTGGCGGCTCATGGCTTC 61.513 66.667 11.43 0.00 41.46 3.86
323 324 4.032452 TGGCGGCTCATGGCTTCA 62.032 61.111 11.43 1.21 41.46 3.02
324 325 3.512516 GGCGGCTCATGGCTTCAC 61.513 66.667 0.00 0.00 41.46 3.18
325 326 3.869272 GCGGCTCATGGCTTCACG 61.869 66.667 6.20 3.17 41.46 4.35
326 327 3.197790 CGGCTCATGGCTTCACGG 61.198 66.667 6.20 0.00 41.46 4.94
327 328 3.512516 GGCTCATGGCTTCACGGC 61.513 66.667 6.20 0.00 41.46 5.68
347 348 4.715523 TGGGTGGCAGCGGCTAAC 62.716 66.667 9.17 4.96 40.87 2.34
356 357 3.849953 GCGGCTAACGGCTTCACG 61.850 66.667 0.00 0.00 44.51 4.35
358 359 1.518572 CGGCTAACGGCTTCACGAT 60.519 57.895 0.00 0.00 41.46 3.73
363 364 0.174845 TAACGGCTTCACGATGGAGG 59.825 55.000 0.00 0.00 37.61 4.30
387 388 0.249447 CGGTGACTCACAGCTTCACA 60.249 55.000 15.47 0.00 43.81 3.58
438 439 0.683504 CCTAGGTGGTACTCGCAGGT 60.684 60.000 0.00 0.00 0.00 4.00
445 446 2.230750 GTGGTACTCGCAGGTAGACTTT 59.769 50.000 0.00 0.00 0.00 2.66
452 453 3.076621 TCGCAGGTAGACTTTTAGACGA 58.923 45.455 0.00 0.00 0.00 4.20
462 463 4.338682 AGACTTTTAGACGATGTAGGCGAT 59.661 41.667 0.00 0.00 0.00 4.58
476 716 2.879070 GCGATCTCGTACTCCGCGA 61.879 63.158 8.23 0.00 42.22 5.87
499 788 0.247736 GCACCTTCTCTCGACATGGT 59.752 55.000 0.00 0.00 0.00 3.55
503 792 0.994995 CTTCTCTCGACATGGTTGCG 59.005 55.000 0.00 0.00 0.00 4.85
508 797 3.112075 CGACATGGTTGCGCTCGT 61.112 61.111 9.73 0.00 0.00 4.18
509 798 2.667318 CGACATGGTTGCGCTCGTT 61.667 57.895 9.73 0.00 0.00 3.85
536 825 3.625314 AAAAAGGTGGCACAGGGAA 57.375 47.368 20.82 0.00 41.80 3.97
537 826 1.413118 AAAAAGGTGGCACAGGGAAG 58.587 50.000 20.82 0.00 41.80 3.46
538 827 0.555769 AAAAGGTGGCACAGGGAAGA 59.444 50.000 20.82 0.00 41.80 2.87
539 828 0.555769 AAAGGTGGCACAGGGAAGAA 59.444 50.000 20.82 0.00 41.80 2.52
540 829 0.779997 AAGGTGGCACAGGGAAGAAT 59.220 50.000 20.82 0.00 41.80 2.40
541 830 0.038744 AGGTGGCACAGGGAAGAATG 59.961 55.000 20.82 0.00 41.80 2.67
542 831 0.038166 GGTGGCACAGGGAAGAATGA 59.962 55.000 20.82 0.00 41.80 2.57
543 832 1.457346 GTGGCACAGGGAAGAATGAG 58.543 55.000 13.86 0.00 41.80 2.90
544 833 0.322816 TGGCACAGGGAAGAATGAGC 60.323 55.000 0.00 0.00 33.00 4.26
545 834 1.372087 GGCACAGGGAAGAATGAGCG 61.372 60.000 0.00 0.00 34.35 5.03
546 835 1.372087 GCACAGGGAAGAATGAGCGG 61.372 60.000 0.00 0.00 0.00 5.52
547 836 1.078143 ACAGGGAAGAATGAGCGGC 60.078 57.895 0.00 0.00 0.00 6.53
564 853 0.537653 GGCGGAGGGGATAAGATAGC 59.462 60.000 0.00 0.00 0.00 2.97
608 925 3.405831 GAACCCTAAACCGTTAGTTGCT 58.594 45.455 0.00 0.00 39.19 3.91
623 940 6.694411 CGTTAGTTGCTCGTAAATATAGTGGT 59.306 38.462 0.00 0.00 0.00 4.16
630 947 5.050295 GCTCGTAAATATAGTGGTTGAAGGC 60.050 44.000 0.00 0.00 0.00 4.35
631 948 5.979993 TCGTAAATATAGTGGTTGAAGGCA 58.020 37.500 0.00 0.00 0.00 4.75
632 949 6.046593 TCGTAAATATAGTGGTTGAAGGCAG 58.953 40.000 0.00 0.00 0.00 4.85
633 950 6.046593 CGTAAATATAGTGGTTGAAGGCAGA 58.953 40.000 0.00 0.00 0.00 4.26
634 951 6.706270 CGTAAATATAGTGGTTGAAGGCAGAT 59.294 38.462 0.00 0.00 0.00 2.90
635 952 7.095607 CGTAAATATAGTGGTTGAAGGCAGATC 60.096 40.741 0.00 0.00 0.00 2.75
636 953 2.672961 TAGTGGTTGAAGGCAGATCG 57.327 50.000 0.00 0.00 0.00 3.69
637 954 0.036010 AGTGGTTGAAGGCAGATCGG 60.036 55.000 0.00 0.00 0.00 4.18
638 955 0.321653 GTGGTTGAAGGCAGATCGGT 60.322 55.000 0.00 0.00 0.00 4.69
639 956 0.400213 TGGTTGAAGGCAGATCGGTT 59.600 50.000 0.00 0.00 0.00 4.44
640 957 0.804989 GGTTGAAGGCAGATCGGTTG 59.195 55.000 0.00 0.00 0.00 3.77
641 958 0.804989 GTTGAAGGCAGATCGGTTGG 59.195 55.000 0.00 0.00 0.00 3.77
642 959 0.960364 TTGAAGGCAGATCGGTTGGC 60.960 55.000 0.00 0.00 41.05 4.52
645 962 4.002797 GGCAGATCGGTTGGCTTT 57.997 55.556 0.32 0.00 38.03 3.51
646 963 3.168773 GGCAGATCGGTTGGCTTTA 57.831 52.632 0.32 0.00 38.03 1.85
647 964 1.680338 GGCAGATCGGTTGGCTTTAT 58.320 50.000 0.32 0.00 38.03 1.40
648 965 2.846193 GGCAGATCGGTTGGCTTTATA 58.154 47.619 0.32 0.00 38.03 0.98
649 966 3.412386 GGCAGATCGGTTGGCTTTATAT 58.588 45.455 0.32 0.00 38.03 0.86
650 967 4.575885 GGCAGATCGGTTGGCTTTATATA 58.424 43.478 0.32 0.00 38.03 0.86
651 968 4.631813 GGCAGATCGGTTGGCTTTATATAG 59.368 45.833 0.32 0.00 38.03 1.31
652 969 5.238583 GCAGATCGGTTGGCTTTATATAGT 58.761 41.667 0.00 0.00 0.00 2.12
653 970 5.348997 GCAGATCGGTTGGCTTTATATAGTC 59.651 44.000 0.00 0.00 0.00 2.59
654 971 5.573282 CAGATCGGTTGGCTTTATATAGTCG 59.427 44.000 0.00 0.00 0.00 4.18
655 972 3.645884 TCGGTTGGCTTTATATAGTCGC 58.354 45.455 0.00 0.00 0.00 5.19
656 973 3.068448 TCGGTTGGCTTTATATAGTCGCA 59.932 43.478 0.00 0.00 0.00 5.10
657 974 3.994392 CGGTTGGCTTTATATAGTCGCAT 59.006 43.478 0.00 0.00 0.00 4.73
658 975 4.143115 CGGTTGGCTTTATATAGTCGCATG 60.143 45.833 0.00 0.00 0.00 4.06
659 976 4.154195 GGTTGGCTTTATATAGTCGCATGG 59.846 45.833 0.00 0.00 0.00 3.66
660 977 4.882842 TGGCTTTATATAGTCGCATGGA 57.117 40.909 0.00 0.00 0.00 3.41
661 978 4.820897 TGGCTTTATATAGTCGCATGGAG 58.179 43.478 0.00 0.00 0.00 3.86
662 979 4.526650 TGGCTTTATATAGTCGCATGGAGA 59.473 41.667 0.00 0.00 0.00 3.71
663 980 5.105752 GGCTTTATATAGTCGCATGGAGAG 58.894 45.833 0.00 0.00 0.00 3.20
664 981 5.336849 GGCTTTATATAGTCGCATGGAGAGT 60.337 44.000 0.00 0.00 0.00 3.24
665 982 6.127703 GGCTTTATATAGTCGCATGGAGAGTA 60.128 42.308 0.00 0.00 0.00 2.59
666 983 6.748198 GCTTTATATAGTCGCATGGAGAGTAC 59.252 42.308 0.00 0.00 0.00 2.73
667 984 7.362229 GCTTTATATAGTCGCATGGAGAGTACT 60.362 40.741 0.00 0.00 0.00 2.73
668 985 9.163899 CTTTATATAGTCGCATGGAGAGTACTA 57.836 37.037 0.00 0.00 0.00 1.82
669 986 6.988622 ATATAGTCGCATGGAGAGTACTAC 57.011 41.667 0.00 0.00 0.00 2.73
670 987 3.284793 AGTCGCATGGAGAGTACTACT 57.715 47.619 0.00 0.00 0.00 2.57
671 988 2.946329 AGTCGCATGGAGAGTACTACTG 59.054 50.000 0.00 0.00 0.00 2.74
672 989 1.676529 TCGCATGGAGAGTACTACTGC 59.323 52.381 0.00 1.11 32.11 4.40
673 990 1.678627 CGCATGGAGAGTACTACTGCT 59.321 52.381 0.00 0.00 32.75 4.24
674 991 2.542618 CGCATGGAGAGTACTACTGCTG 60.543 54.545 0.00 3.02 32.75 4.41
675 992 2.428890 GCATGGAGAGTACTACTGCTGT 59.571 50.000 0.00 0.66 32.45 4.40
676 993 3.736433 GCATGGAGAGTACTACTGCTGTG 60.736 52.174 6.48 5.65 32.45 3.66
677 994 3.156288 TGGAGAGTACTACTGCTGTGT 57.844 47.619 6.48 5.43 0.00 3.72
678 995 2.820197 TGGAGAGTACTACTGCTGTGTG 59.180 50.000 6.48 2.04 0.00 3.82
679 996 2.164624 GGAGAGTACTACTGCTGTGTGG 59.835 54.545 6.48 0.00 0.00 4.17
680 997 1.546476 AGAGTACTACTGCTGTGTGGC 59.454 52.381 6.48 1.87 0.00 5.01
681 998 1.546476 GAGTACTACTGCTGTGTGGCT 59.454 52.381 6.48 5.92 0.00 4.75
682 999 2.753452 GAGTACTACTGCTGTGTGGCTA 59.247 50.000 6.48 0.00 0.00 3.93
683 1000 2.755655 AGTACTACTGCTGTGTGGCTAG 59.244 50.000 6.48 0.00 0.00 3.42
684 1001 0.898320 ACTACTGCTGTGTGGCTAGG 59.102 55.000 6.48 0.00 0.00 3.02
685 1002 0.898320 CTACTGCTGTGTGGCTAGGT 59.102 55.000 6.48 0.00 0.00 3.08
686 1003 2.100197 CTACTGCTGTGTGGCTAGGTA 58.900 52.381 6.48 0.00 0.00 3.08
687 1004 0.898320 ACTGCTGTGTGGCTAGGTAG 59.102 55.000 0.00 0.00 0.00 3.18
688 1005 1.186200 CTGCTGTGTGGCTAGGTAGA 58.814 55.000 0.00 0.00 0.00 2.59
689 1006 1.135915 CTGCTGTGTGGCTAGGTAGAG 59.864 57.143 0.00 0.00 0.00 2.43
690 1007 0.461961 GCTGTGTGGCTAGGTAGAGG 59.538 60.000 0.00 0.00 0.00 3.69
691 1008 1.853963 CTGTGTGGCTAGGTAGAGGT 58.146 55.000 0.00 0.00 0.00 3.85
692 1009 1.751924 CTGTGTGGCTAGGTAGAGGTC 59.248 57.143 0.00 0.00 0.00 3.85
693 1010 1.112950 GTGTGGCTAGGTAGAGGTCC 58.887 60.000 0.00 0.00 0.00 4.46
694 1011 0.395311 TGTGGCTAGGTAGAGGTCCG 60.395 60.000 0.00 0.00 0.00 4.79
695 1012 1.455217 TGGCTAGGTAGAGGTCCGC 60.455 63.158 0.00 0.00 0.00 5.54
696 1013 2.201708 GGCTAGGTAGAGGTCCGCC 61.202 68.421 0.00 0.00 0.00 6.13
707 1024 2.332063 AGGTCCGCCTTGTATTGATG 57.668 50.000 0.00 0.00 44.18 3.07
708 1025 1.837439 AGGTCCGCCTTGTATTGATGA 59.163 47.619 0.00 0.00 44.18 2.92
709 1026 2.238646 AGGTCCGCCTTGTATTGATGAA 59.761 45.455 0.00 0.00 44.18 2.57
710 1027 2.354821 GGTCCGCCTTGTATTGATGAAC 59.645 50.000 0.00 0.00 0.00 3.18
711 1028 3.270877 GTCCGCCTTGTATTGATGAACT 58.729 45.455 0.00 0.00 0.00 3.01
712 1029 4.439057 GTCCGCCTTGTATTGATGAACTA 58.561 43.478 0.00 0.00 0.00 2.24
713 1030 5.057149 GTCCGCCTTGTATTGATGAACTAT 58.943 41.667 0.00 0.00 0.00 2.12
714 1031 5.527582 GTCCGCCTTGTATTGATGAACTATT 59.472 40.000 0.00 0.00 0.00 1.73
715 1032 5.527214 TCCGCCTTGTATTGATGAACTATTG 59.473 40.000 0.00 0.00 0.00 1.90
716 1033 5.207768 CGCCTTGTATTGATGAACTATTGC 58.792 41.667 0.00 0.00 0.00 3.56
717 1034 5.523369 GCCTTGTATTGATGAACTATTGCC 58.477 41.667 0.00 0.00 0.00 4.52
718 1035 5.300286 GCCTTGTATTGATGAACTATTGCCT 59.700 40.000 0.00 0.00 0.00 4.75
719 1036 6.514048 GCCTTGTATTGATGAACTATTGCCTC 60.514 42.308 0.00 0.00 0.00 4.70
720 1037 6.769822 CCTTGTATTGATGAACTATTGCCTCT 59.230 38.462 0.00 0.00 0.00 3.69
721 1038 7.041508 CCTTGTATTGATGAACTATTGCCTCTC 60.042 40.741 0.00 0.00 0.00 3.20
722 1039 5.985530 TGTATTGATGAACTATTGCCTCTCG 59.014 40.000 0.00 0.00 0.00 4.04
723 1040 4.736126 TTGATGAACTATTGCCTCTCGA 57.264 40.909 0.00 0.00 0.00 4.04
724 1041 4.944619 TGATGAACTATTGCCTCTCGAT 57.055 40.909 0.00 0.00 0.00 3.59
725 1042 5.282055 TGATGAACTATTGCCTCTCGATT 57.718 39.130 0.00 0.00 0.00 3.34
726 1043 5.052481 TGATGAACTATTGCCTCTCGATTG 58.948 41.667 0.00 0.00 0.00 2.67
727 1044 4.471904 TGAACTATTGCCTCTCGATTGT 57.528 40.909 0.00 0.00 0.00 2.71
728 1045 5.592104 TGAACTATTGCCTCTCGATTGTA 57.408 39.130 0.00 0.00 0.00 2.41
729 1046 5.972935 TGAACTATTGCCTCTCGATTGTAA 58.027 37.500 0.00 0.00 0.00 2.41
730 1047 5.810587 TGAACTATTGCCTCTCGATTGTAAC 59.189 40.000 0.00 0.00 0.00 2.50
731 1048 4.694339 ACTATTGCCTCTCGATTGTAACC 58.306 43.478 0.00 0.00 0.00 2.85
732 1049 2.396590 TTGCCTCTCGATTGTAACCC 57.603 50.000 0.00 0.00 0.00 4.11
733 1050 1.568504 TGCCTCTCGATTGTAACCCT 58.431 50.000 0.00 0.00 0.00 4.34
734 1051 2.742348 TGCCTCTCGATTGTAACCCTA 58.258 47.619 0.00 0.00 0.00 3.53
735 1052 3.305720 TGCCTCTCGATTGTAACCCTAT 58.694 45.455 0.00 0.00 0.00 2.57
736 1053 3.709653 TGCCTCTCGATTGTAACCCTATT 59.290 43.478 0.00 0.00 0.00 1.73
737 1054 4.202223 TGCCTCTCGATTGTAACCCTATTC 60.202 45.833 0.00 0.00 0.00 1.75
738 1055 4.202223 GCCTCTCGATTGTAACCCTATTCA 60.202 45.833 0.00 0.00 0.00 2.57
739 1056 5.511545 GCCTCTCGATTGTAACCCTATTCAT 60.512 44.000 0.00 0.00 0.00 2.57
740 1057 6.525629 CCTCTCGATTGTAACCCTATTCATT 58.474 40.000 0.00 0.00 0.00 2.57
741 1058 6.992715 CCTCTCGATTGTAACCCTATTCATTT 59.007 38.462 0.00 0.00 0.00 2.32
742 1059 7.041780 CCTCTCGATTGTAACCCTATTCATTTG 60.042 40.741 0.00 0.00 0.00 2.32
743 1060 6.765989 TCTCGATTGTAACCCTATTCATTTGG 59.234 38.462 0.00 0.00 0.00 3.28
744 1061 6.654959 TCGATTGTAACCCTATTCATTTGGA 58.345 36.000 0.00 0.00 0.00 3.53
745 1062 7.113437 TCGATTGTAACCCTATTCATTTGGAA 58.887 34.615 0.00 0.00 40.46 3.53
747 1064 9.062524 CGATTGTAACCCTATTCATTTGGAATA 57.937 33.333 0.00 0.00 44.38 1.75
751 1068 9.762381 TGTAACCCTATTCATTTGGAATAAACT 57.238 29.630 0.00 0.00 45.41 2.66
754 1071 9.547279 AACCCTATTCATTTGGAATAAACTTCT 57.453 29.630 0.00 0.00 45.41 2.85
755 1072 9.547279 ACCCTATTCATTTGGAATAAACTTCTT 57.453 29.630 0.00 0.00 45.41 2.52
763 1080 9.289303 CATTTGGAATAAACTTCTTTACCATCG 57.711 33.333 0.00 0.00 0.00 3.84
764 1081 6.431198 TGGAATAAACTTCTTTACCATCGC 57.569 37.500 0.00 0.00 0.00 4.58
765 1082 5.941058 TGGAATAAACTTCTTTACCATCGCA 59.059 36.000 0.00 0.00 0.00 5.10
766 1083 6.431543 TGGAATAAACTTCTTTACCATCGCAA 59.568 34.615 0.00 0.00 0.00 4.85
767 1084 7.040340 TGGAATAAACTTCTTTACCATCGCAAA 60.040 33.333 0.00 0.00 0.00 3.68
768 1085 7.810759 GGAATAAACTTCTTTACCATCGCAAAA 59.189 33.333 0.00 0.00 0.00 2.44
769 1086 9.187455 GAATAAACTTCTTTACCATCGCAAAAA 57.813 29.630 0.00 0.00 0.00 1.94
801 1118 4.660938 GGTGGTTTGCGGGCTCCT 62.661 66.667 0.00 0.00 0.00 3.69
824 1141 1.914531 AAATGTTTACGGGCCGACGC 61.915 55.000 35.78 18.97 37.37 5.19
886 1245 4.649692 ACGTTATCCCGCTAGAAGAGATA 58.350 43.478 0.00 0.00 0.00 1.98
891 1250 5.765576 ATCCCGCTAGAAGAGATACTCTA 57.234 43.478 0.00 0.00 40.28 2.43
893 1252 6.129414 TCCCGCTAGAAGAGATACTCTAAT 57.871 41.667 0.00 0.00 40.28 1.73
932 1405 0.604578 CCCCCGAACGAACTACTTCA 59.395 55.000 0.00 0.00 0.00 3.02
959 1435 7.568134 CGTTCAAAATTCAAAATCTCAAGCAGG 60.568 37.037 0.00 0.00 0.00 4.85
988 1464 4.410400 CCTCCACCCAAGCGGACC 62.410 72.222 0.00 0.00 34.64 4.46
1364 1865 0.035152 TCCAAGCGCATCAAGGTGAT 60.035 50.000 11.47 0.00 37.65 3.06
1365 1866 0.379669 CCAAGCGCATCAAGGTGATC 59.620 55.000 11.47 0.00 34.28 2.92
1366 1867 1.376543 CAAGCGCATCAAGGTGATCT 58.623 50.000 11.47 0.00 34.28 2.75
1367 1868 1.329906 CAAGCGCATCAAGGTGATCTC 59.670 52.381 11.47 0.00 34.28 2.75
1368 1869 0.529337 AGCGCATCAAGGTGATCTCG 60.529 55.000 11.47 5.52 34.28 4.04
1369 1870 1.930100 CGCATCAAGGTGATCTCGC 59.070 57.895 0.00 0.00 34.28 5.03
1370 1871 0.529337 CGCATCAAGGTGATCTCGCT 60.529 55.000 0.00 0.00 34.28 4.93
1371 1872 1.216122 GCATCAAGGTGATCTCGCTC 58.784 55.000 0.00 0.00 34.28 5.03
1372 1873 1.202510 GCATCAAGGTGATCTCGCTCT 60.203 52.381 0.00 0.00 34.28 4.09
1385 1888 2.101415 TCTCGCTCTCTCTCTCTCTCTG 59.899 54.545 0.00 0.00 0.00 3.35
1437 1940 1.905215 CCATCCTTAGCCCATCGATCT 59.095 52.381 0.00 0.00 0.00 2.75
1458 1975 0.872021 GTGACGTGATCCATCGCCTC 60.872 60.000 0.00 0.00 33.90 4.70
1459 1976 1.037579 TGACGTGATCCATCGCCTCT 61.038 55.000 0.00 0.00 33.90 3.69
1534 2064 1.227002 GCGGAGAAGGAGCGTAAGG 60.227 63.158 0.00 0.00 38.28 2.69
1541 2071 0.466124 AAGGAGCGTAAGGAGATGGC 59.534 55.000 0.00 0.00 38.28 4.40
1664 2196 5.107259 CGTGTATTCTGAATTTCGTGTGGAA 60.107 40.000 8.38 0.00 0.00 3.53
1762 2310 0.793478 CTTCGTCTCGTGGTACTGCG 60.793 60.000 0.00 0.00 0.00 5.18
1859 2422 4.378046 GGTGCATCGTTTGGTACTAACTTG 60.378 45.833 0.00 0.42 0.00 3.16
1876 2444 0.459489 TTGGGTTTGCACTTGTCAGC 59.541 50.000 0.00 0.00 0.00 4.26
1931 2506 0.469892 TGGCCAGAGCTATCGATGGA 60.470 55.000 13.60 0.00 39.73 3.41
1994 2569 0.590195 CAGTTCAGTTCAGGCTGTGC 59.410 55.000 15.27 8.58 37.70 4.57
2012 2587 1.339727 TGCCTGCTACGTCTCTGAGTA 60.340 52.381 4.32 0.00 0.00 2.59
2018 2593 3.937706 TGCTACGTCTCTGAGTAGGTAAC 59.062 47.826 4.32 4.60 40.32 2.50
2025 2600 4.008330 TCTCTGAGTAGGTAACCACTTCG 58.992 47.826 4.32 0.00 37.17 3.79
2030 2605 0.248289 TAGGTAACCACTTCGCCAGC 59.752 55.000 0.00 0.00 37.17 4.85
2033 2608 0.517316 GTAACCACTTCGCCAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
2068 2683 6.560253 ATGAGTTGGTCATGTTCAGTAAAC 57.440 37.500 0.00 0.00 44.82 2.01
2091 2706 5.240183 ACTTTCATGAGTGTTTGTCCATGAG 59.760 40.000 0.00 0.00 43.96 2.90
2121 3110 5.148502 CAGGTGTAGTATCTACCAGGGATT 58.851 45.833 0.00 0.00 36.94 3.01
2195 3270 9.967451 CTAGTAGTCAGATGATCCTATCCTTTA 57.033 37.037 0.00 0.00 0.00 1.85
2281 3792 1.164411 TCCGTGGACATCAACAATGC 58.836 50.000 0.00 0.00 39.12 3.56
2304 3815 4.261155 CCGTACATGTTGGCTTGGATATTG 60.261 45.833 2.30 0.00 0.00 1.90
2311 3822 1.209261 TGGCTTGGATATTGCAGACGA 59.791 47.619 0.00 0.00 0.00 4.20
2381 3896 5.865552 CCAGAAATTTGTGGTCTAAATGCAG 59.134 40.000 23.03 0.00 36.89 4.41
2467 3982 9.726438 AACACCTCATATAAACTGCCTTATATC 57.274 33.333 1.71 0.00 33.89 1.63
2468 3983 9.105844 ACACCTCATATAAACTGCCTTATATCT 57.894 33.333 1.71 0.00 33.89 1.98
2510 4025 0.891373 TCCTCTGTGTGTGCTAGCTC 59.109 55.000 17.23 13.38 0.00 4.09
2513 4069 2.098934 CCTCTGTGTGTGCTAGCTCTAG 59.901 54.545 17.23 9.75 36.29 2.43
2602 4213 8.436200 GGCTAAACAAATAAGCTATCTACATCG 58.564 37.037 0.00 0.00 36.48 3.84
2639 4250 5.221204 GGAAATCTTCCTCTGATTCCATTGC 60.221 44.000 0.00 0.00 46.57 3.56
2640 4251 4.515028 ATCTTCCTCTGATTCCATTGCA 57.485 40.909 0.00 0.00 0.00 4.08
2671 4282 8.519526 TGTTGTTTACAGTCTTTCTTCAACAAT 58.480 29.630 0.00 0.00 39.27 2.71
2752 4999 7.375053 TGTATATAAGTCATGCGCTGTTCATA 58.625 34.615 9.73 0.00 0.00 2.15
2853 5103 7.065803 TGGTAATGTTTACTAGCTGAATCTTGC 59.934 37.037 0.00 0.00 0.00 4.01
2924 5174 1.079127 AATTCCTGGACTCGTGGCG 60.079 57.895 0.00 0.00 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 9.731643 GCTTTTTGCTTCTGCTTCTGCATTTTT 62.732 37.037 0.00 0.00 42.90 1.94
11 12 8.370945 GCTTTTTGCTTCTGCTTCTGCATTTT 62.371 38.462 0.00 0.00 42.90 1.82
12 13 6.982129 GCTTTTTGCTTCTGCTTCTGCATTT 61.982 40.000 0.00 0.00 42.90 2.32
13 14 5.561773 GCTTTTTGCTTCTGCTTCTGCATT 61.562 41.667 0.00 0.00 42.90 3.56
14 15 4.105878 GCTTTTTGCTTCTGCTTCTGCAT 61.106 43.478 0.00 0.00 42.90 3.96
15 16 2.800629 GCTTTTTGCTTCTGCTTCTGCA 60.801 45.455 0.00 0.00 42.18 4.41
16 17 1.791204 GCTTTTTGCTTCTGCTTCTGC 59.209 47.619 0.00 0.00 40.48 4.26
17 18 2.401351 GGCTTTTTGCTTCTGCTTCTG 58.599 47.619 0.00 0.00 42.39 3.02
18 19 1.342496 GGGCTTTTTGCTTCTGCTTCT 59.658 47.619 0.00 0.00 42.39 2.85
19 20 1.069049 TGGGCTTTTTGCTTCTGCTTC 59.931 47.619 0.00 0.00 42.39 3.86
20 21 1.122227 TGGGCTTTTTGCTTCTGCTT 58.878 45.000 0.00 0.00 42.39 3.91
21 22 1.122227 TTGGGCTTTTTGCTTCTGCT 58.878 45.000 0.00 0.00 42.39 4.24
22 23 1.599071 GTTTGGGCTTTTTGCTTCTGC 59.401 47.619 0.00 0.00 42.39 4.26
23 24 1.860326 CGTTTGGGCTTTTTGCTTCTG 59.140 47.619 0.00 0.00 42.39 3.02
24 25 1.754226 TCGTTTGGGCTTTTTGCTTCT 59.246 42.857 0.00 0.00 42.39 2.85
25 26 2.217429 TCGTTTGGGCTTTTTGCTTC 57.783 45.000 0.00 0.00 42.39 3.86
26 27 2.682155 TTCGTTTGGGCTTTTTGCTT 57.318 40.000 0.00 0.00 42.39 3.91
27 28 2.908688 ATTCGTTTGGGCTTTTTGCT 57.091 40.000 0.00 0.00 42.39 3.91
28 29 2.993220 CCTATTCGTTTGGGCTTTTTGC 59.007 45.455 0.00 0.00 41.94 3.68
29 30 3.584834 CCCTATTCGTTTGGGCTTTTTG 58.415 45.455 0.00 0.00 33.39 2.44
30 31 3.953712 CCCTATTCGTTTGGGCTTTTT 57.046 42.857 0.00 0.00 33.39 1.94
36 37 3.617284 ACTAAAGCCCTATTCGTTTGGG 58.383 45.455 0.00 0.00 42.80 4.12
37 38 6.937436 AATACTAAAGCCCTATTCGTTTGG 57.063 37.500 0.00 0.00 0.00 3.28
38 39 7.193595 CCAAATACTAAAGCCCTATTCGTTTG 58.806 38.462 0.00 0.00 0.00 2.93
39 40 6.183360 GCCAAATACTAAAGCCCTATTCGTTT 60.183 38.462 0.00 0.00 0.00 3.60
40 41 5.298527 GCCAAATACTAAAGCCCTATTCGTT 59.701 40.000 0.00 0.00 0.00 3.85
41 42 4.820173 GCCAAATACTAAAGCCCTATTCGT 59.180 41.667 0.00 0.00 0.00 3.85
42 43 4.084013 CGCCAAATACTAAAGCCCTATTCG 60.084 45.833 0.00 0.00 0.00 3.34
43 44 5.061179 TCGCCAAATACTAAAGCCCTATTC 58.939 41.667 0.00 0.00 0.00 1.75
44 45 5.043737 TCGCCAAATACTAAAGCCCTATT 57.956 39.130 0.00 0.00 0.00 1.73
45 46 4.699925 TCGCCAAATACTAAAGCCCTAT 57.300 40.909 0.00 0.00 0.00 2.57
46 47 4.490899 TTCGCCAAATACTAAAGCCCTA 57.509 40.909 0.00 0.00 0.00 3.53
47 48 3.359695 TTCGCCAAATACTAAAGCCCT 57.640 42.857 0.00 0.00 0.00 5.19
48 49 4.443913 TTTTCGCCAAATACTAAAGCCC 57.556 40.909 0.00 0.00 0.00 5.19
67 68 5.570320 TGGTCTAAAGCTGCCTCTATTTTT 58.430 37.500 0.00 0.00 0.00 1.94
68 69 5.179452 TGGTCTAAAGCTGCCTCTATTTT 57.821 39.130 0.00 0.00 0.00 1.82
69 70 4.844349 TGGTCTAAAGCTGCCTCTATTT 57.156 40.909 0.00 0.00 0.00 1.40
70 71 4.657969 AGATGGTCTAAAGCTGCCTCTATT 59.342 41.667 0.00 0.00 0.00 1.73
71 72 4.230455 AGATGGTCTAAAGCTGCCTCTAT 58.770 43.478 0.00 0.00 0.00 1.98
72 73 3.639094 GAGATGGTCTAAAGCTGCCTCTA 59.361 47.826 0.00 0.00 0.00 2.43
73 74 2.433970 GAGATGGTCTAAAGCTGCCTCT 59.566 50.000 0.00 0.00 0.00 3.69
74 75 2.433970 AGAGATGGTCTAAAGCTGCCTC 59.566 50.000 0.00 0.00 31.71 4.70
75 76 2.476199 AGAGATGGTCTAAAGCTGCCT 58.524 47.619 0.00 0.00 31.71 4.75
76 77 2.998316 AGAGATGGTCTAAAGCTGCC 57.002 50.000 0.00 0.00 31.71 4.85
77 78 4.314121 CCATAGAGATGGTCTAAAGCTGC 58.686 47.826 0.00 0.00 46.80 5.25
89 90 0.678395 AGCGCACCTCCATAGAGATG 59.322 55.000 11.47 0.00 43.39 2.90
90 91 2.294449 TAGCGCACCTCCATAGAGAT 57.706 50.000 11.47 0.00 43.39 2.75
91 92 2.294449 ATAGCGCACCTCCATAGAGA 57.706 50.000 11.47 0.00 43.39 3.10
92 93 4.400884 AGATTATAGCGCACCTCCATAGAG 59.599 45.833 11.47 0.00 40.09 2.43
93 94 4.344978 AGATTATAGCGCACCTCCATAGA 58.655 43.478 11.47 0.00 0.00 1.98
94 95 4.158579 TGAGATTATAGCGCACCTCCATAG 59.841 45.833 11.47 0.00 0.00 2.23
95 96 4.086457 TGAGATTATAGCGCACCTCCATA 58.914 43.478 11.47 0.00 0.00 2.74
96 97 2.899900 TGAGATTATAGCGCACCTCCAT 59.100 45.455 11.47 0.00 0.00 3.41
97 98 2.297315 CTGAGATTATAGCGCACCTCCA 59.703 50.000 11.47 0.00 0.00 3.86
98 99 2.928731 GCTGAGATTATAGCGCACCTCC 60.929 54.545 11.47 0.00 0.00 4.30
99 100 2.333014 GCTGAGATTATAGCGCACCTC 58.667 52.381 11.47 6.95 0.00 3.85
100 101 1.001406 GGCTGAGATTATAGCGCACCT 59.999 52.381 11.47 0.00 40.78 4.00
101 102 1.001406 AGGCTGAGATTATAGCGCACC 59.999 52.381 11.47 0.00 40.78 5.01
102 103 2.064762 CAGGCTGAGATTATAGCGCAC 58.935 52.381 9.42 0.00 40.78 5.34
103 104 1.606480 GCAGGCTGAGATTATAGCGCA 60.606 52.381 20.86 0.00 40.78 6.09
104 105 1.074752 GCAGGCTGAGATTATAGCGC 58.925 55.000 20.86 0.00 40.78 5.92
105 106 2.445565 TGCAGGCTGAGATTATAGCG 57.554 50.000 20.86 0.00 40.78 4.26
106 107 5.616424 CGATTTTGCAGGCTGAGATTATAGC 60.616 44.000 20.86 0.00 39.17 2.97
107 108 5.698089 TCGATTTTGCAGGCTGAGATTATAG 59.302 40.000 20.86 4.96 0.00 1.31
108 109 5.610398 TCGATTTTGCAGGCTGAGATTATA 58.390 37.500 20.86 0.00 0.00 0.98
109 110 4.454678 TCGATTTTGCAGGCTGAGATTAT 58.545 39.130 20.86 3.97 0.00 1.28
110 111 3.872696 TCGATTTTGCAGGCTGAGATTA 58.127 40.909 20.86 0.00 0.00 1.75
111 112 2.715046 TCGATTTTGCAGGCTGAGATT 58.285 42.857 20.86 0.00 0.00 2.40
112 113 2.408271 TCGATTTTGCAGGCTGAGAT 57.592 45.000 20.86 5.36 0.00 2.75
113 114 2.408271 ATCGATTTTGCAGGCTGAGA 57.592 45.000 20.86 1.86 0.00 3.27
114 115 3.498927 AAATCGATTTTGCAGGCTGAG 57.501 42.857 20.86 0.00 0.00 3.35
115 116 3.181511 CGTAAATCGATTTTGCAGGCTGA 60.182 43.478 27.10 4.48 42.86 4.26
116 117 3.100817 CGTAAATCGATTTTGCAGGCTG 58.899 45.455 27.10 10.94 42.86 4.85
117 118 2.097466 CCGTAAATCGATTTTGCAGGCT 59.903 45.455 27.10 4.37 42.86 4.58
118 119 2.159435 ACCGTAAATCGATTTTGCAGGC 60.159 45.455 27.10 10.68 42.86 4.85
119 120 3.757745 ACCGTAAATCGATTTTGCAGG 57.242 42.857 27.10 23.58 42.86 4.85
120 121 3.778718 CGAACCGTAAATCGATTTTGCAG 59.221 43.478 27.10 15.98 41.43 4.41
121 122 3.186817 ACGAACCGTAAATCGATTTTGCA 59.813 39.130 27.10 8.18 41.43 4.08
122 123 3.739494 ACGAACCGTAAATCGATTTTGC 58.261 40.909 27.10 18.60 41.43 3.68
123 124 4.092383 AGGACGAACCGTAAATCGATTTTG 59.908 41.667 27.10 19.17 41.37 2.44
124 125 4.248058 AGGACGAACCGTAAATCGATTTT 58.752 39.130 27.10 10.09 41.37 1.82
125 126 3.853475 AGGACGAACCGTAAATCGATTT 58.147 40.909 25.48 25.48 41.37 2.17
126 127 3.515330 AGGACGAACCGTAAATCGATT 57.485 42.857 4.39 4.39 41.37 3.34
127 128 4.096984 ACTTAGGACGAACCGTAAATCGAT 59.903 41.667 1.84 0.00 41.37 3.59
128 129 3.440173 ACTTAGGACGAACCGTAAATCGA 59.560 43.478 1.84 0.00 41.37 3.59
129 130 3.762779 ACTTAGGACGAACCGTAAATCG 58.237 45.455 0.00 0.00 41.37 3.34
130 131 4.737054 TGACTTAGGACGAACCGTAAATC 58.263 43.478 0.00 0.00 41.37 2.17
131 132 4.789012 TGACTTAGGACGAACCGTAAAT 57.211 40.909 0.00 0.00 41.37 1.40
132 133 4.789012 ATGACTTAGGACGAACCGTAAA 57.211 40.909 0.00 0.00 41.37 2.01
133 134 4.789012 AATGACTTAGGACGAACCGTAA 57.211 40.909 0.00 0.00 41.37 3.18
134 135 4.789012 AAATGACTTAGGACGAACCGTA 57.211 40.909 0.00 0.00 41.37 4.02
135 136 3.672767 AAATGACTTAGGACGAACCGT 57.327 42.857 0.00 0.00 45.10 4.83
136 137 4.708601 CAAAAATGACTTAGGACGAACCG 58.291 43.478 0.00 0.00 44.74 4.44
137 138 4.023536 TGCAAAAATGACTTAGGACGAACC 60.024 41.667 0.00 0.00 39.35 3.62
138 139 5.103290 TGCAAAAATGACTTAGGACGAAC 57.897 39.130 0.00 0.00 0.00 3.95
139 140 4.215399 CCTGCAAAAATGACTTAGGACGAA 59.785 41.667 0.00 0.00 0.00 3.85
140 141 3.751175 CCTGCAAAAATGACTTAGGACGA 59.249 43.478 0.00 0.00 0.00 4.20
141 142 3.670627 GCCTGCAAAAATGACTTAGGACG 60.671 47.826 0.00 0.00 0.00 4.79
142 143 3.255642 TGCCTGCAAAAATGACTTAGGAC 59.744 43.478 0.00 0.00 0.00 3.85
143 144 3.495331 TGCCTGCAAAAATGACTTAGGA 58.505 40.909 0.00 0.00 0.00 2.94
144 145 3.940209 TGCCTGCAAAAATGACTTAGG 57.060 42.857 0.00 0.00 0.00 2.69
145 146 6.790285 AAAATGCCTGCAAAAATGACTTAG 57.210 33.333 0.00 0.00 0.00 2.18
146 147 6.017275 CCAAAAATGCCTGCAAAAATGACTTA 60.017 34.615 0.00 0.00 0.00 2.24
147 148 5.221087 CCAAAAATGCCTGCAAAAATGACTT 60.221 36.000 0.00 0.00 0.00 3.01
148 149 4.276431 CCAAAAATGCCTGCAAAAATGACT 59.724 37.500 0.00 0.00 0.00 3.41
149 150 4.538917 CCAAAAATGCCTGCAAAAATGAC 58.461 39.130 0.00 0.00 0.00 3.06
150 151 3.004524 GCCAAAAATGCCTGCAAAAATGA 59.995 39.130 0.00 0.00 0.00 2.57
151 152 3.310246 GCCAAAAATGCCTGCAAAAATG 58.690 40.909 0.00 0.00 0.00 2.32
152 153 2.296752 GGCCAAAAATGCCTGCAAAAAT 59.703 40.909 0.00 0.00 45.70 1.82
153 154 1.680207 GGCCAAAAATGCCTGCAAAAA 59.320 42.857 0.00 0.00 45.70 1.94
154 155 1.316651 GGCCAAAAATGCCTGCAAAA 58.683 45.000 0.00 0.00 45.70 2.44
155 156 3.018479 GGCCAAAAATGCCTGCAAA 57.982 47.368 0.00 0.00 45.70 3.68
156 157 4.796314 GGCCAAAAATGCCTGCAA 57.204 50.000 0.00 0.00 45.70 4.08
162 163 2.809174 GCGTCGGGCCAAAAATGC 60.809 61.111 4.39 0.00 34.80 3.56
163 164 0.598680 TTTGCGTCGGGCCAAAAATG 60.599 50.000 4.39 0.00 42.61 2.32
164 165 0.105039 TTTTGCGTCGGGCCAAAAAT 59.895 45.000 4.39 0.00 42.61 1.82
165 166 0.806492 GTTTTGCGTCGGGCCAAAAA 60.806 50.000 4.39 0.00 37.93 1.94
166 167 1.227002 GTTTTGCGTCGGGCCAAAA 60.227 52.632 4.39 0.00 37.93 2.44
167 168 1.739338 ATGTTTTGCGTCGGGCCAAA 61.739 50.000 4.39 0.00 42.61 3.28
168 169 0.889638 TATGTTTTGCGTCGGGCCAA 60.890 50.000 4.39 0.00 42.61 4.52
169 170 0.889638 TTATGTTTTGCGTCGGGCCA 60.890 50.000 4.39 0.00 42.61 5.36
170 171 0.455464 GTTATGTTTTGCGTCGGGCC 60.455 55.000 0.00 0.00 42.61 5.80
171 172 0.519961 AGTTATGTTTTGCGTCGGGC 59.480 50.000 0.00 0.00 43.96 6.13
172 173 4.152759 TCTTTAGTTATGTTTTGCGTCGGG 59.847 41.667 0.00 0.00 0.00 5.14
173 174 5.272167 TCTTTAGTTATGTTTTGCGTCGG 57.728 39.130 0.00 0.00 0.00 4.79
174 175 8.868744 TTAATCTTTAGTTATGTTTTGCGTCG 57.131 30.769 0.00 0.00 0.00 5.12
184 185 9.736023 GCAGGACCATTTTAATCTTTAGTTATG 57.264 33.333 0.00 0.00 0.00 1.90
185 186 9.700831 AGCAGGACCATTTTAATCTTTAGTTAT 57.299 29.630 0.00 0.00 0.00 1.89
187 188 8.957466 GTAGCAGGACCATTTTAATCTTTAGTT 58.043 33.333 0.00 0.00 0.00 2.24
188 189 8.107095 TGTAGCAGGACCATTTTAATCTTTAGT 58.893 33.333 0.00 0.00 0.00 2.24
189 190 8.506168 TGTAGCAGGACCATTTTAATCTTTAG 57.494 34.615 0.00 0.00 0.00 1.85
190 191 9.474313 AATGTAGCAGGACCATTTTAATCTTTA 57.526 29.630 0.00 0.00 0.00 1.85
191 192 7.961326 ATGTAGCAGGACCATTTTAATCTTT 57.039 32.000 0.00 0.00 0.00 2.52
192 193 7.961326 AATGTAGCAGGACCATTTTAATCTT 57.039 32.000 0.00 0.00 0.00 2.40
193 194 7.961326 AAATGTAGCAGGACCATTTTAATCT 57.039 32.000 0.00 0.00 35.79 2.40
194 195 9.120538 TCTAAATGTAGCAGGACCATTTTAATC 57.879 33.333 0.00 0.00 39.04 1.75
195 196 9.646522 ATCTAAATGTAGCAGGACCATTTTAAT 57.353 29.630 0.00 0.00 39.04 1.40
197 198 9.778741 CTATCTAAATGTAGCAGGACCATTTTA 57.221 33.333 0.00 0.00 39.04 1.52
198 199 7.721399 CCTATCTAAATGTAGCAGGACCATTTT 59.279 37.037 4.97 0.00 39.04 1.82
199 200 7.147302 ACCTATCTAAATGTAGCAGGACCATTT 60.147 37.037 14.32 0.00 40.71 2.32
200 201 6.330250 ACCTATCTAAATGTAGCAGGACCATT 59.670 38.462 14.32 0.00 34.88 3.16
201 202 5.846714 ACCTATCTAAATGTAGCAGGACCAT 59.153 40.000 14.32 0.00 34.88 3.55
202 203 5.216622 ACCTATCTAAATGTAGCAGGACCA 58.783 41.667 14.32 0.00 34.88 4.02
203 204 5.810080 ACCTATCTAAATGTAGCAGGACC 57.190 43.478 14.32 0.00 34.88 4.46
204 205 5.992217 CCAACCTATCTAAATGTAGCAGGAC 59.008 44.000 14.32 0.00 34.88 3.85
205 206 5.903010 TCCAACCTATCTAAATGTAGCAGGA 59.097 40.000 14.32 0.00 34.88 3.86
206 207 5.992217 GTCCAACCTATCTAAATGTAGCAGG 59.008 44.000 8.25 8.25 36.25 4.85
207 208 5.992217 GGTCCAACCTATCTAAATGTAGCAG 59.008 44.000 0.00 0.00 34.73 4.24
208 209 5.925509 GGTCCAACCTATCTAAATGTAGCA 58.074 41.667 0.00 0.00 34.73 3.49
223 224 0.822121 AACTTTGGCGAGGTCCAACC 60.822 55.000 0.00 0.00 45.08 3.77
224 225 0.591659 GAACTTTGGCGAGGTCCAAC 59.408 55.000 0.00 0.00 45.08 3.77
225 226 0.181587 TGAACTTTGGCGAGGTCCAA 59.818 50.000 3.66 0.00 43.84 3.53
226 227 0.534203 GTGAACTTTGGCGAGGTCCA 60.534 55.000 3.66 0.00 32.24 4.02
227 228 0.534203 TGTGAACTTTGGCGAGGTCC 60.534 55.000 3.66 0.00 32.24 4.46
228 229 0.586802 GTGTGAACTTTGGCGAGGTC 59.413 55.000 0.00 0.00 33.88 3.85
229 230 0.107410 TGTGTGAACTTTGGCGAGGT 60.107 50.000 0.00 0.00 0.00 3.85
230 231 0.307760 GTGTGTGAACTTTGGCGAGG 59.692 55.000 0.00 0.00 0.00 4.63
231 232 1.013596 TGTGTGTGAACTTTGGCGAG 58.986 50.000 0.00 0.00 0.00 5.03
232 233 0.730265 GTGTGTGTGAACTTTGGCGA 59.270 50.000 0.00 0.00 0.00 5.54
233 234 0.449786 TGTGTGTGTGAACTTTGGCG 59.550 50.000 0.00 0.00 0.00 5.69
234 235 1.201181 TGTGTGTGTGTGAACTTTGGC 59.799 47.619 0.00 0.00 0.00 4.52
235 236 2.227626 TGTGTGTGTGTGTGAACTTTGG 59.772 45.455 0.00 0.00 0.00 3.28
236 237 3.233578 GTGTGTGTGTGTGTGAACTTTG 58.766 45.455 0.00 0.00 0.00 2.77
237 238 2.881513 TGTGTGTGTGTGTGTGAACTTT 59.118 40.909 0.00 0.00 0.00 2.66
238 239 2.483877 CTGTGTGTGTGTGTGTGAACTT 59.516 45.455 0.00 0.00 0.00 2.66
239 240 2.076100 CTGTGTGTGTGTGTGTGAACT 58.924 47.619 0.00 0.00 0.00 3.01
240 241 1.804151 ACTGTGTGTGTGTGTGTGAAC 59.196 47.619 0.00 0.00 0.00 3.18
241 242 2.177394 ACTGTGTGTGTGTGTGTGAA 57.823 45.000 0.00 0.00 0.00 3.18
242 243 2.073056 GAACTGTGTGTGTGTGTGTGA 58.927 47.619 0.00 0.00 0.00 3.58
243 244 1.803555 TGAACTGTGTGTGTGTGTGTG 59.196 47.619 0.00 0.00 0.00 3.82
244 245 2.177394 TGAACTGTGTGTGTGTGTGT 57.823 45.000 0.00 0.00 0.00 3.72
245 246 2.677337 TGATGAACTGTGTGTGTGTGTG 59.323 45.455 0.00 0.00 0.00 3.82
246 247 2.677836 GTGATGAACTGTGTGTGTGTGT 59.322 45.455 0.00 0.00 0.00 3.72
247 248 2.677337 TGTGATGAACTGTGTGTGTGTG 59.323 45.455 0.00 0.00 0.00 3.82
248 249 2.677836 GTGTGATGAACTGTGTGTGTGT 59.322 45.455 0.00 0.00 0.00 3.72
249 250 2.677337 TGTGTGATGAACTGTGTGTGTG 59.323 45.455 0.00 0.00 0.00 3.82
250 251 2.984562 TGTGTGATGAACTGTGTGTGT 58.015 42.857 0.00 0.00 0.00 3.72
251 252 4.511082 TGTATGTGTGATGAACTGTGTGTG 59.489 41.667 0.00 0.00 0.00 3.82
252 253 4.511454 GTGTATGTGTGATGAACTGTGTGT 59.489 41.667 0.00 0.00 0.00 3.72
253 254 4.511082 TGTGTATGTGTGATGAACTGTGTG 59.489 41.667 0.00 0.00 0.00 3.82
254 255 4.702831 TGTGTATGTGTGATGAACTGTGT 58.297 39.130 0.00 0.00 0.00 3.72
255 256 5.868043 ATGTGTATGTGTGATGAACTGTG 57.132 39.130 0.00 0.00 0.00 3.66
256 257 7.443879 TGTTTATGTGTATGTGTGATGAACTGT 59.556 33.333 0.00 0.00 0.00 3.55
257 258 7.805700 TGTTTATGTGTATGTGTGATGAACTG 58.194 34.615 0.00 0.00 0.00 3.16
258 259 7.977789 TGTTTATGTGTATGTGTGATGAACT 57.022 32.000 0.00 0.00 0.00 3.01
259 260 9.702726 GTATGTTTATGTGTATGTGTGATGAAC 57.297 33.333 0.00 0.00 0.00 3.18
260 261 9.665719 AGTATGTTTATGTGTATGTGTGATGAA 57.334 29.630 0.00 0.00 0.00 2.57
272 273 8.861086 CCTCCATCTAGTAGTATGTTTATGTGT 58.139 37.037 0.00 0.00 0.00 3.72
273 274 8.307483 CCCTCCATCTAGTAGTATGTTTATGTG 58.693 40.741 0.00 0.00 0.00 3.21
274 275 7.038941 GCCCTCCATCTAGTAGTATGTTTATGT 60.039 40.741 0.00 0.00 0.00 2.29
275 276 7.039011 TGCCCTCCATCTAGTAGTATGTTTATG 60.039 40.741 0.00 0.00 0.00 1.90
276 277 7.016914 TGCCCTCCATCTAGTAGTATGTTTAT 58.983 38.462 0.00 0.00 0.00 1.40
277 278 6.378745 TGCCCTCCATCTAGTAGTATGTTTA 58.621 40.000 0.00 0.00 0.00 2.01
278 279 5.216622 TGCCCTCCATCTAGTAGTATGTTT 58.783 41.667 0.00 0.00 0.00 2.83
279 280 4.816126 TGCCCTCCATCTAGTAGTATGTT 58.184 43.478 0.00 0.00 0.00 2.71
280 281 4.140900 ACTGCCCTCCATCTAGTAGTATGT 60.141 45.833 0.00 0.00 0.00 2.29
281 282 4.219507 CACTGCCCTCCATCTAGTAGTATG 59.780 50.000 0.00 0.59 0.00 2.39
282 283 4.411927 CACTGCCCTCCATCTAGTAGTAT 58.588 47.826 0.00 0.00 0.00 2.12
283 284 3.436615 CCACTGCCCTCCATCTAGTAGTA 60.437 52.174 0.00 0.00 0.00 1.82
284 285 2.672098 CACTGCCCTCCATCTAGTAGT 58.328 52.381 0.00 0.00 0.00 2.73
285 286 1.967066 CCACTGCCCTCCATCTAGTAG 59.033 57.143 0.00 0.00 0.00 2.57
286 287 1.291033 ACCACTGCCCTCCATCTAGTA 59.709 52.381 0.00 0.00 0.00 1.82
287 288 0.043334 ACCACTGCCCTCCATCTAGT 59.957 55.000 0.00 0.00 0.00 2.57
288 289 0.467384 CACCACTGCCCTCCATCTAG 59.533 60.000 0.00 0.00 0.00 2.43
289 290 0.982852 CCACCACTGCCCTCCATCTA 60.983 60.000 0.00 0.00 0.00 1.98
290 291 2.304056 CCACCACTGCCCTCCATCT 61.304 63.158 0.00 0.00 0.00 2.90
291 292 2.273449 CCACCACTGCCCTCCATC 59.727 66.667 0.00 0.00 0.00 3.51
292 293 4.052518 GCCACCACTGCCCTCCAT 62.053 66.667 0.00 0.00 0.00 3.41
300 301 3.129502 CATGAGCCGCCACCACTG 61.130 66.667 0.00 0.00 0.00 3.66
301 302 4.415150 CCATGAGCCGCCACCACT 62.415 66.667 0.00 0.00 0.00 4.00
305 306 3.512516 GAAGCCATGAGCCGCCAC 61.513 66.667 0.00 0.00 45.47 5.01
306 307 4.032452 TGAAGCCATGAGCCGCCA 62.032 61.111 0.00 0.00 45.47 5.69
307 308 3.512516 GTGAAGCCATGAGCCGCC 61.513 66.667 0.00 0.00 45.47 6.13
308 309 3.869272 CGTGAAGCCATGAGCCGC 61.869 66.667 0.00 0.00 45.47 6.53
309 310 3.197790 CCGTGAAGCCATGAGCCG 61.198 66.667 0.00 0.00 45.47 5.52
310 311 3.512516 GCCGTGAAGCCATGAGCC 61.513 66.667 0.00 0.00 45.47 4.70
311 312 2.747460 TGCCGTGAAGCCATGAGC 60.747 61.111 0.00 0.00 44.25 4.26
312 313 1.376424 ACTGCCGTGAAGCCATGAG 60.376 57.895 0.00 0.00 0.00 2.90
313 314 1.672030 CACTGCCGTGAAGCCATGA 60.672 57.895 1.41 0.00 43.97 3.07
314 315 2.693762 CCACTGCCGTGAAGCCATG 61.694 63.158 10.15 0.00 43.97 3.66
315 316 2.360350 CCACTGCCGTGAAGCCAT 60.360 61.111 10.15 0.00 43.97 4.40
316 317 4.641645 CCCACTGCCGTGAAGCCA 62.642 66.667 10.15 0.00 43.97 4.75
317 318 4.643387 ACCCACTGCCGTGAAGCC 62.643 66.667 10.15 0.00 43.97 4.35
318 319 3.357079 CACCCACTGCCGTGAAGC 61.357 66.667 10.15 0.00 43.97 3.86
319 320 2.669569 CCACCCACTGCCGTGAAG 60.670 66.667 10.15 3.43 43.97 3.02
320 321 4.947147 GCCACCCACTGCCGTGAA 62.947 66.667 10.15 0.00 43.97 3.18
329 330 4.715523 TTAGCCGCTGCCACCCAC 62.716 66.667 2.16 0.00 38.69 4.61
330 331 4.715523 GTTAGCCGCTGCCACCCA 62.716 66.667 2.16 0.00 38.69 4.51
336 337 3.865830 GAAGCCGTTAGCCGCTGC 61.866 66.667 2.16 0.00 45.47 5.25
337 338 2.434185 TGAAGCCGTTAGCCGCTG 60.434 61.111 2.16 0.00 45.47 5.18
338 339 2.434359 GTGAAGCCGTTAGCCGCT 60.434 61.111 0.00 0.00 45.47 5.52
343 344 1.560923 CTCCATCGTGAAGCCGTTAG 58.439 55.000 0.00 0.00 0.00 2.34
345 346 1.079127 CCTCCATCGTGAAGCCGTT 60.079 57.895 0.00 0.00 0.00 4.44
347 348 2.202932 CCCTCCATCGTGAAGCCG 60.203 66.667 0.00 0.00 0.00 5.52
351 352 4.467084 GCCGCCCTCCATCGTGAA 62.467 66.667 0.00 0.00 0.00 3.18
371 372 2.104622 TCCATTGTGAAGCTGTGAGTCA 59.895 45.455 0.00 0.00 0.00 3.41
379 380 1.377725 CGCCCTCCATTGTGAAGCT 60.378 57.895 0.00 0.00 0.00 3.74
417 418 1.304630 TGCGAGTACCACCTAGGCA 60.305 57.895 9.30 0.00 43.14 4.75
420 421 1.948145 CTACCTGCGAGTACCACCTAG 59.052 57.143 0.00 0.00 0.00 3.02
421 422 1.561076 TCTACCTGCGAGTACCACCTA 59.439 52.381 0.00 0.00 0.00 3.08
438 439 4.877823 TCGCCTACATCGTCTAAAAGTCTA 59.122 41.667 0.00 0.00 0.00 2.59
445 446 2.479275 CGAGATCGCCTACATCGTCTAA 59.521 50.000 0.00 0.00 0.00 2.10
452 453 2.152830 GGAGTACGAGATCGCCTACAT 58.847 52.381 1.39 0.00 44.43 2.29
476 716 0.827925 TGTCGAGAGAAGGTGCTGGT 60.828 55.000 0.00 0.00 45.01 4.00
490 779 2.809174 CGAGCGCAACCATGTCGA 60.809 61.111 11.47 0.00 32.32 4.20
528 817 1.372087 GCCGCTCATTCTTCCCTGTG 61.372 60.000 0.00 0.00 0.00 3.66
529 818 1.078143 GCCGCTCATTCTTCCCTGT 60.078 57.895 0.00 0.00 0.00 4.00
530 819 2.176273 CGCCGCTCATTCTTCCCTG 61.176 63.158 0.00 0.00 0.00 4.45
531 820 2.187946 CGCCGCTCATTCTTCCCT 59.812 61.111 0.00 0.00 0.00 4.20
532 821 2.897350 CCGCCGCTCATTCTTCCC 60.897 66.667 0.00 0.00 0.00 3.97
533 822 1.884926 CTCCGCCGCTCATTCTTCC 60.885 63.158 0.00 0.00 0.00 3.46
534 823 1.884926 CCTCCGCCGCTCATTCTTC 60.885 63.158 0.00 0.00 0.00 2.87
535 824 2.187946 CCTCCGCCGCTCATTCTT 59.812 61.111 0.00 0.00 0.00 2.52
536 825 3.854669 CCCTCCGCCGCTCATTCT 61.855 66.667 0.00 0.00 0.00 2.40
537 826 4.918201 CCCCTCCGCCGCTCATTC 62.918 72.222 0.00 0.00 0.00 2.67
539 828 3.828083 TATCCCCTCCGCCGCTCAT 62.828 63.158 0.00 0.00 0.00 2.90
540 829 4.533124 TATCCCCTCCGCCGCTCA 62.533 66.667 0.00 0.00 0.00 4.26
541 830 3.227792 CTTATCCCCTCCGCCGCTC 62.228 68.421 0.00 0.00 0.00 5.03
542 831 3.234730 CTTATCCCCTCCGCCGCT 61.235 66.667 0.00 0.00 0.00 5.52
543 832 1.255667 TATCTTATCCCCTCCGCCGC 61.256 60.000 0.00 0.00 0.00 6.53
544 833 0.818296 CTATCTTATCCCCTCCGCCG 59.182 60.000 0.00 0.00 0.00 6.46
545 834 0.537653 GCTATCTTATCCCCTCCGCC 59.462 60.000 0.00 0.00 0.00 6.13
546 835 0.173708 CGCTATCTTATCCCCTCCGC 59.826 60.000 0.00 0.00 0.00 5.54
547 836 0.818296 CCGCTATCTTATCCCCTCCG 59.182 60.000 0.00 0.00 0.00 4.63
564 853 0.249197 TCTCGCATTCAGATCTGCCG 60.249 55.000 18.36 16.00 34.89 5.69
597 886 6.143438 CCACTATATTTACGAGCAACTAACGG 59.857 42.308 0.00 0.00 0.00 4.44
600 889 8.252417 TCAACCACTATATTTACGAGCAACTAA 58.748 33.333 0.00 0.00 0.00 2.24
601 890 7.774134 TCAACCACTATATTTACGAGCAACTA 58.226 34.615 0.00 0.00 0.00 2.24
604 893 6.537301 CCTTCAACCACTATATTTACGAGCAA 59.463 38.462 0.00 0.00 0.00 3.91
608 925 5.979993 TGCCTTCAACCACTATATTTACGA 58.020 37.500 0.00 0.00 0.00 3.43
623 940 0.960364 GCCAACCGATCTGCCTTCAA 60.960 55.000 0.00 0.00 0.00 2.69
630 947 5.573282 CGACTATATAAAGCCAACCGATCTG 59.427 44.000 0.00 0.00 0.00 2.90
631 948 5.710984 CGACTATATAAAGCCAACCGATCT 58.289 41.667 0.00 0.00 0.00 2.75
632 949 4.326548 GCGACTATATAAAGCCAACCGATC 59.673 45.833 0.00 0.00 0.00 3.69
633 950 4.243270 GCGACTATATAAAGCCAACCGAT 58.757 43.478 0.00 0.00 0.00 4.18
634 951 3.068448 TGCGACTATATAAAGCCAACCGA 59.932 43.478 0.00 0.00 0.00 4.69
635 952 3.386486 TGCGACTATATAAAGCCAACCG 58.614 45.455 0.00 0.00 0.00 4.44
636 953 4.154195 CCATGCGACTATATAAAGCCAACC 59.846 45.833 0.00 0.00 0.00 3.77
637 954 4.994852 TCCATGCGACTATATAAAGCCAAC 59.005 41.667 0.00 0.00 0.00 3.77
638 955 5.011635 TCTCCATGCGACTATATAAAGCCAA 59.988 40.000 0.00 0.00 0.00 4.52
639 956 4.526650 TCTCCATGCGACTATATAAAGCCA 59.473 41.667 0.00 0.00 0.00 4.75
640 957 5.073311 TCTCCATGCGACTATATAAAGCC 57.927 43.478 0.00 0.00 0.00 4.35
641 958 5.715070 ACTCTCCATGCGACTATATAAAGC 58.285 41.667 0.00 0.00 0.00 3.51
642 959 8.046294 AGTACTCTCCATGCGACTATATAAAG 57.954 38.462 0.00 0.00 0.00 1.85
643 960 7.997773 AGTACTCTCCATGCGACTATATAAA 57.002 36.000 0.00 0.00 0.00 1.40
644 961 8.319881 AGTAGTACTCTCCATGCGACTATATAA 58.680 37.037 0.00 0.00 0.00 0.98
645 962 7.764901 CAGTAGTACTCTCCATGCGACTATATA 59.235 40.741 0.00 0.00 0.00 0.86
646 963 6.596106 CAGTAGTACTCTCCATGCGACTATAT 59.404 42.308 0.00 0.00 0.00 0.86
647 964 5.932883 CAGTAGTACTCTCCATGCGACTATA 59.067 44.000 0.00 0.00 0.00 1.31
648 965 4.757657 CAGTAGTACTCTCCATGCGACTAT 59.242 45.833 0.00 0.00 0.00 2.12
649 966 4.127907 CAGTAGTACTCTCCATGCGACTA 58.872 47.826 0.00 0.00 0.00 2.59
650 967 2.946329 CAGTAGTACTCTCCATGCGACT 59.054 50.000 0.00 0.00 0.00 4.18
651 968 2.541999 GCAGTAGTACTCTCCATGCGAC 60.542 54.545 0.00 0.00 0.00 5.19
652 969 1.676529 GCAGTAGTACTCTCCATGCGA 59.323 52.381 0.00 0.00 0.00 5.10
653 970 1.678627 AGCAGTAGTACTCTCCATGCG 59.321 52.381 0.00 0.00 37.28 4.73
654 971 2.428890 ACAGCAGTAGTACTCTCCATGC 59.571 50.000 0.00 4.17 0.00 4.06
655 972 3.445450 ACACAGCAGTAGTACTCTCCATG 59.555 47.826 0.00 0.00 0.00 3.66
656 973 3.445450 CACACAGCAGTAGTACTCTCCAT 59.555 47.826 0.00 0.00 0.00 3.41
657 974 2.820197 CACACAGCAGTAGTACTCTCCA 59.180 50.000 0.00 0.00 0.00 3.86
658 975 2.164624 CCACACAGCAGTAGTACTCTCC 59.835 54.545 0.00 0.00 0.00 3.71
659 976 2.416162 GCCACACAGCAGTAGTACTCTC 60.416 54.545 0.00 0.00 0.00 3.20
660 977 1.546476 GCCACACAGCAGTAGTACTCT 59.454 52.381 0.00 0.00 0.00 3.24
661 978 1.546476 AGCCACACAGCAGTAGTACTC 59.454 52.381 0.00 0.00 34.23 2.59
662 979 1.633774 AGCCACACAGCAGTAGTACT 58.366 50.000 0.00 0.00 34.23 2.73
663 980 2.159226 CCTAGCCACACAGCAGTAGTAC 60.159 54.545 0.00 0.00 34.23 2.73
664 981 2.100197 CCTAGCCACACAGCAGTAGTA 58.900 52.381 0.00 0.00 34.23 1.82
665 982 0.898320 CCTAGCCACACAGCAGTAGT 59.102 55.000 0.00 0.00 34.23 2.73
666 983 0.898320 ACCTAGCCACACAGCAGTAG 59.102 55.000 0.00 0.00 34.23 2.57
667 984 2.100197 CTACCTAGCCACACAGCAGTA 58.900 52.381 0.00 0.00 34.23 2.74
668 985 0.898320 CTACCTAGCCACACAGCAGT 59.102 55.000 0.00 0.00 34.23 4.40
669 986 1.135915 CTCTACCTAGCCACACAGCAG 59.864 57.143 0.00 0.00 34.23 4.24
670 987 1.186200 CTCTACCTAGCCACACAGCA 58.814 55.000 0.00 0.00 34.23 4.41
671 988 0.461961 CCTCTACCTAGCCACACAGC 59.538 60.000 0.00 0.00 0.00 4.40
672 989 1.751924 GACCTCTACCTAGCCACACAG 59.248 57.143 0.00 0.00 0.00 3.66
673 990 1.618888 GGACCTCTACCTAGCCACACA 60.619 57.143 0.00 0.00 0.00 3.72
674 991 1.112950 GGACCTCTACCTAGCCACAC 58.887 60.000 0.00 0.00 0.00 3.82
675 992 0.395311 CGGACCTCTACCTAGCCACA 60.395 60.000 0.00 0.00 0.00 4.17
676 993 1.736365 GCGGACCTCTACCTAGCCAC 61.736 65.000 0.00 0.00 0.00 5.01
677 994 1.455217 GCGGACCTCTACCTAGCCA 60.455 63.158 0.00 0.00 0.00 4.75
678 995 2.201708 GGCGGACCTCTACCTAGCC 61.202 68.421 0.00 0.00 36.08 3.93
679 996 1.152715 AGGCGGACCTCTACCTAGC 60.153 63.158 0.00 0.00 46.34 3.42
689 1006 2.325583 TCATCAATACAAGGCGGACC 57.674 50.000 0.00 0.00 0.00 4.46
690 1007 3.270877 AGTTCATCAATACAAGGCGGAC 58.729 45.455 0.00 0.00 0.00 4.79
691 1008 3.627395 AGTTCATCAATACAAGGCGGA 57.373 42.857 0.00 0.00 0.00 5.54
692 1009 5.751680 CAATAGTTCATCAATACAAGGCGG 58.248 41.667 0.00 0.00 0.00 6.13
693 1010 5.207768 GCAATAGTTCATCAATACAAGGCG 58.792 41.667 0.00 0.00 0.00 5.52
694 1011 5.300286 AGGCAATAGTTCATCAATACAAGGC 59.700 40.000 0.00 0.00 0.00 4.35
695 1012 6.769822 AGAGGCAATAGTTCATCAATACAAGG 59.230 38.462 0.00 0.00 0.00 3.61
696 1013 7.307042 CGAGAGGCAATAGTTCATCAATACAAG 60.307 40.741 0.00 0.00 0.00 3.16
697 1014 6.479990 CGAGAGGCAATAGTTCATCAATACAA 59.520 38.462 0.00 0.00 0.00 2.41
698 1015 5.985530 CGAGAGGCAATAGTTCATCAATACA 59.014 40.000 0.00 0.00 0.00 2.29
699 1016 6.216569 TCGAGAGGCAATAGTTCATCAATAC 58.783 40.000 0.00 0.00 0.00 1.89
700 1017 6.405278 TCGAGAGGCAATAGTTCATCAATA 57.595 37.500 0.00 0.00 0.00 1.90
701 1018 5.282055 TCGAGAGGCAATAGTTCATCAAT 57.718 39.130 0.00 0.00 0.00 2.57
702 1019 4.736126 TCGAGAGGCAATAGTTCATCAA 57.264 40.909 0.00 0.00 0.00 2.57
703 1020 4.944619 ATCGAGAGGCAATAGTTCATCA 57.055 40.909 0.00 0.00 0.00 3.07
704 1021 5.053145 ACAATCGAGAGGCAATAGTTCATC 58.947 41.667 0.00 0.00 0.00 2.92
705 1022 5.028549 ACAATCGAGAGGCAATAGTTCAT 57.971 39.130 0.00 0.00 0.00 2.57
706 1023 4.471904 ACAATCGAGAGGCAATAGTTCA 57.528 40.909 0.00 0.00 0.00 3.18
707 1024 5.234543 GGTTACAATCGAGAGGCAATAGTTC 59.765 44.000 0.00 0.00 0.00 3.01
708 1025 5.116882 GGTTACAATCGAGAGGCAATAGTT 58.883 41.667 0.00 0.00 0.00 2.24
709 1026 4.443034 GGGTTACAATCGAGAGGCAATAGT 60.443 45.833 0.00 0.00 0.00 2.12
710 1027 4.058817 GGGTTACAATCGAGAGGCAATAG 58.941 47.826 0.00 0.00 0.00 1.73
711 1028 3.709653 AGGGTTACAATCGAGAGGCAATA 59.290 43.478 0.00 0.00 0.00 1.90
712 1029 2.505819 AGGGTTACAATCGAGAGGCAAT 59.494 45.455 0.00 0.00 0.00 3.56
713 1030 1.906574 AGGGTTACAATCGAGAGGCAA 59.093 47.619 0.00 0.00 0.00 4.52
714 1031 1.568504 AGGGTTACAATCGAGAGGCA 58.431 50.000 0.00 0.00 0.00 4.75
715 1032 4.202223 TGAATAGGGTTACAATCGAGAGGC 60.202 45.833 0.00 0.00 0.00 4.70
716 1033 5.531122 TGAATAGGGTTACAATCGAGAGG 57.469 43.478 0.00 0.00 0.00 3.69
717 1034 7.041780 CCAAATGAATAGGGTTACAATCGAGAG 60.042 40.741 0.00 0.00 0.00 3.20
718 1035 6.765989 CCAAATGAATAGGGTTACAATCGAGA 59.234 38.462 0.00 0.00 0.00 4.04
719 1036 6.765989 TCCAAATGAATAGGGTTACAATCGAG 59.234 38.462 0.00 0.00 0.00 4.04
720 1037 6.654959 TCCAAATGAATAGGGTTACAATCGA 58.345 36.000 0.00 0.00 0.00 3.59
721 1038 6.935741 TCCAAATGAATAGGGTTACAATCG 57.064 37.500 0.00 0.00 0.00 3.34
725 1042 9.762381 AGTTTATTCCAAATGAATAGGGTTACA 57.238 29.630 0.00 0.00 44.61 2.41
728 1045 9.547279 AGAAGTTTATTCCAAATGAATAGGGTT 57.453 29.630 0.00 0.00 44.61 4.11
729 1046 9.547279 AAGAAGTTTATTCCAAATGAATAGGGT 57.453 29.630 0.00 0.00 44.61 4.34
737 1054 9.289303 CGATGGTAAAGAAGTTTATTCCAAATG 57.711 33.333 0.00 0.00 31.44 2.32
738 1055 7.973944 GCGATGGTAAAGAAGTTTATTCCAAAT 59.026 33.333 0.00 0.00 31.44 2.32
739 1056 7.040340 TGCGATGGTAAAGAAGTTTATTCCAAA 60.040 33.333 0.00 0.00 31.44 3.28
740 1057 6.431543 TGCGATGGTAAAGAAGTTTATTCCAA 59.568 34.615 0.00 0.00 31.44 3.53
741 1058 5.941058 TGCGATGGTAAAGAAGTTTATTCCA 59.059 36.000 0.00 0.00 31.94 3.53
742 1059 6.431198 TGCGATGGTAAAGAAGTTTATTCC 57.569 37.500 0.00 0.00 30.76 3.01
743 1060 8.736751 TTTTGCGATGGTAAAGAAGTTTATTC 57.263 30.769 0.00 0.00 30.76 1.75
766 1083 4.476846 ACCACCCCTCCAAAAATTCTTTTT 59.523 37.500 0.00 0.00 43.20 1.94
767 1084 4.044308 ACCACCCCTCCAAAAATTCTTTT 58.956 39.130 0.00 0.00 35.02 2.27
768 1085 3.664320 ACCACCCCTCCAAAAATTCTTT 58.336 40.909 0.00 0.00 0.00 2.52
769 1086 3.344535 ACCACCCCTCCAAAAATTCTT 57.655 42.857 0.00 0.00 0.00 2.52
770 1087 3.344535 AACCACCCCTCCAAAAATTCT 57.655 42.857 0.00 0.00 0.00 2.40
771 1088 3.738982 CAAACCACCCCTCCAAAAATTC 58.261 45.455 0.00 0.00 0.00 2.17
772 1089 2.158682 GCAAACCACCCCTCCAAAAATT 60.159 45.455 0.00 0.00 0.00 1.82
773 1090 1.419762 GCAAACCACCCCTCCAAAAAT 59.580 47.619 0.00 0.00 0.00 1.82
774 1091 0.833949 GCAAACCACCCCTCCAAAAA 59.166 50.000 0.00 0.00 0.00 1.94
775 1092 1.395826 CGCAAACCACCCCTCCAAAA 61.396 55.000 0.00 0.00 0.00 2.44
776 1093 1.830408 CGCAAACCACCCCTCCAAA 60.830 57.895 0.00 0.00 0.00 3.28
777 1094 2.203422 CGCAAACCACCCCTCCAA 60.203 61.111 0.00 0.00 0.00 3.53
778 1095 4.278513 CCGCAAACCACCCCTCCA 62.279 66.667 0.00 0.00 0.00 3.86
786 1103 0.178987 TTAAAGGAGCCCGCAAACCA 60.179 50.000 0.00 0.00 0.00 3.67
798 1115 3.190953 CGGCCCGTAAACATTTTAAAGGA 59.809 43.478 0.00 0.00 0.00 3.36
800 1117 4.160594 GTCGGCCCGTAAACATTTTAAAG 58.839 43.478 1.63 0.00 0.00 1.85
801 1118 3.364764 CGTCGGCCCGTAAACATTTTAAA 60.365 43.478 1.63 0.00 0.00 1.52
824 1141 3.313526 CCAGATCAGGTCCGCTAAATTTG 59.686 47.826 0.00 0.00 0.00 2.32
886 1245 9.134055 AGGAAAGCTTTATAGACGTATTAGAGT 57.866 33.333 12.68 0.00 0.00 3.24
891 1250 6.464039 GGGGAGGAAAGCTTTATAGACGTATT 60.464 42.308 12.68 0.00 0.00 1.89
893 1252 4.343239 GGGGAGGAAAGCTTTATAGACGTA 59.657 45.833 12.68 0.00 0.00 3.57
932 1405 6.756074 TGCTTGAGATTTTGAATTTTGAACGT 59.244 30.769 0.00 0.00 0.00 3.99
959 1435 1.683319 GGGTGGAGGAAGAAGAATGGC 60.683 57.143 0.00 0.00 0.00 4.40
988 1464 1.918467 TTCCTCATGGCTGCCTCTGG 61.918 60.000 21.03 15.70 0.00 3.86
1364 1865 2.101415 CAGAGAGAGAGAGAGAGCGAGA 59.899 54.545 0.00 0.00 0.00 4.04
1365 1866 2.159043 ACAGAGAGAGAGAGAGAGCGAG 60.159 54.545 0.00 0.00 0.00 5.03
1366 1867 1.831106 ACAGAGAGAGAGAGAGAGCGA 59.169 52.381 0.00 0.00 0.00 4.93
1367 1868 2.159043 AGACAGAGAGAGAGAGAGAGCG 60.159 54.545 0.00 0.00 0.00 5.03
1368 1869 3.133721 AGAGACAGAGAGAGAGAGAGAGC 59.866 52.174 0.00 0.00 0.00 4.09
1369 1870 4.403752 TCAGAGACAGAGAGAGAGAGAGAG 59.596 50.000 0.00 0.00 0.00 3.20
1370 1871 4.352893 TCAGAGACAGAGAGAGAGAGAGA 58.647 47.826 0.00 0.00 0.00 3.10
1371 1872 4.743057 TCAGAGACAGAGAGAGAGAGAG 57.257 50.000 0.00 0.00 0.00 3.20
1372 1873 4.101585 GGATCAGAGACAGAGAGAGAGAGA 59.898 50.000 0.00 0.00 0.00 3.10
1412 1915 1.683385 GATGGGCTAAGGATGGCAAAC 59.317 52.381 0.00 0.00 34.13 2.93
1437 1940 0.739462 GGCGATGGATCACGTCACAA 60.739 55.000 0.00 0.00 34.67 3.33
1534 2064 0.887933 GAGATCCTCTCGGCCATCTC 59.112 60.000 11.52 11.52 35.04 2.75
1541 2071 3.299190 GCCCGGAGATCCTCTCGG 61.299 72.222 0.73 13.32 44.28 4.63
1664 2196 2.214376 TCGCAATTTCAGGGTCCAAT 57.786 45.000 0.00 0.00 0.00 3.16
1762 2310 3.423162 ATGTCTCTGCTCGCTCGCC 62.423 63.158 0.00 0.00 0.00 5.54
1848 2411 3.483421 AGTGCAAACCCAAGTTAGTACC 58.517 45.455 0.00 0.00 34.19 3.34
1859 2422 1.008538 CGCTGACAAGTGCAAACCC 60.009 57.895 0.00 0.00 0.00 4.11
1876 2444 1.003718 GGGAAGGTCACCTTGGACG 60.004 63.158 15.92 0.00 44.82 4.79
1994 2569 1.944024 CCTACTCAGAGACGTAGCAGG 59.056 57.143 3.79 0.00 33.46 4.85
2012 2587 1.003718 GCTGGCGAAGTGGTTACCT 60.004 57.895 2.07 0.00 0.00 3.08
2018 2593 2.074230 TTTGCAAGCTGGCGAAGTGG 62.074 55.000 12.06 0.00 32.32 4.00
2025 2600 2.088950 ATGTCAATTTGCAAGCTGGC 57.911 45.000 5.99 5.99 0.00 4.85
2030 2605 6.392354 ACCAACTCATATGTCAATTTGCAAG 58.608 36.000 0.00 0.00 0.00 4.01
2033 2608 5.953183 TGACCAACTCATATGTCAATTTGC 58.047 37.500 1.90 0.00 34.98 3.68
2068 2683 5.471116 TCTCATGGACAAACACTCATGAAAG 59.529 40.000 0.00 0.00 43.33 2.62
2091 2706 5.530171 TGGTAGATACTACACCTGTCGATTC 59.470 44.000 10.39 0.00 33.28 2.52
2121 3110 4.822896 GGTAACCTGTAACCAACAATCACA 59.177 41.667 0.00 0.00 37.74 3.58
2159 3182 7.503521 TCATCTGACTACTAGAACTGCATAG 57.496 40.000 0.00 0.00 0.00 2.23
2160 3183 7.175816 GGATCATCTGACTACTAGAACTGCATA 59.824 40.741 0.00 0.00 0.00 3.14
2161 3184 6.015519 GGATCATCTGACTACTAGAACTGCAT 60.016 42.308 0.00 0.00 0.00 3.96
2162 3185 5.300539 GGATCATCTGACTACTAGAACTGCA 59.699 44.000 0.00 0.00 0.00 4.41
2163 3186 5.534654 AGGATCATCTGACTACTAGAACTGC 59.465 44.000 0.00 0.00 0.00 4.40
2164 3187 8.862325 ATAGGATCATCTGACTACTAGAACTG 57.138 38.462 0.00 0.00 0.00 3.16
2165 3188 8.107095 GGATAGGATCATCTGACTACTAGAACT 58.893 40.741 0.00 0.00 0.00 3.01
2176 3199 7.982252 AGCAAATAAAGGATAGGATCATCTGA 58.018 34.615 0.00 0.00 0.00 3.27
2177 3200 8.512956 CAAGCAAATAAAGGATAGGATCATCTG 58.487 37.037 0.00 0.00 0.00 2.90
2195 3270 2.901839 AGCAGGAATCAACCAAGCAAAT 59.098 40.909 0.00 0.00 36.29 2.32
2196 3271 2.318908 AGCAGGAATCAACCAAGCAAA 58.681 42.857 0.00 0.00 36.29 3.68
2243 3322 6.432783 CCACGGATTAGAAATGCCCATTATAA 59.567 38.462 0.00 0.00 0.00 0.98
2281 3792 1.750193 ATCCAAGCCAACATGTACGG 58.250 50.000 0.00 4.08 0.00 4.02
2304 3815 5.741388 ATCCAACTGAAATAATCGTCTGC 57.259 39.130 0.00 0.00 0.00 4.26
2399 3914 9.431887 GAAAGTATGGTTAACTCATACAAGTCA 57.568 33.333 29.14 11.11 45.52 3.41
2470 3985 9.579932 AGAGGAAGACATGGAAAAATTATATCC 57.420 33.333 0.00 0.00 0.00 2.59
2480 3995 3.136443 ACACACAGAGGAAGACATGGAAA 59.864 43.478 0.00 0.00 0.00 3.13
2487 4002 2.928731 GCTAGCACACACAGAGGAAGAC 60.929 54.545 10.63 0.00 0.00 3.01
2602 4213 6.793492 GGAAGATTTCCTATCTGTATGTGC 57.207 41.667 0.61 0.00 46.57 4.57
2639 4250 8.687824 AAGAAAGACTGTAAACAACACAAATG 57.312 30.769 0.00 0.00 33.45 2.32
2640 4251 8.519526 TGAAGAAAGACTGTAAACAACACAAAT 58.480 29.630 0.00 0.00 33.45 2.32
2723 4970 8.777865 AACAGCGCATGACTTATATACATATT 57.222 30.769 11.47 0.00 0.00 1.28
2733 4980 6.761242 AGTAAATATGAACAGCGCATGACTTA 59.239 34.615 11.47 8.06 0.00 2.24
2752 4999 7.004555 TGGATGTCGGCATATAGAAGTAAAT 57.995 36.000 0.51 0.00 35.07 1.40
2924 5174 2.053627 CAAATGTGCGAGTTTTCTGCC 58.946 47.619 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.