Multiple sequence alignment - TraesCS1D01G320800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G320800 chr1D 100.000 7804 0 0 484 8287 414502289 414510092 0.000000e+00 14412.0
1 TraesCS1D01G320800 chr1D 100.000 166 0 0 1 166 414501806 414501971 2.910000e-79 307.0
2 TraesCS1D01G320800 chr1D 91.558 154 12 1 8003 8156 439108824 439108672 2.340000e-50 211.0
3 TraesCS1D01G320800 chr1D 81.250 256 21 14 1224 1453 90393840 90393586 1.840000e-41 182.0
4 TraesCS1D01G320800 chr1D 86.555 119 15 1 7850 7968 33751420 33751537 6.750000e-26 130.0
5 TraesCS1D01G320800 chr1D 83.810 105 13 4 8179 8281 414562523 414562625 6.850000e-16 97.1
6 TraesCS1D01G320800 chr1A 89.881 3182 177 66 4623 7750 511408045 511411135 0.000000e+00 3958.0
7 TraesCS1D01G320800 chr1A 91.670 2473 122 35 517 2921 511404013 511406469 0.000000e+00 3349.0
8 TraesCS1D01G320800 chr1A 84.330 702 55 21 2940 3613 511406531 511407205 3.260000e-178 636.0
9 TraesCS1D01G320800 chr1A 81.296 540 59 22 4023 4534 511407488 511408013 4.660000e-107 399.0
10 TraesCS1D01G320800 chr1A 91.197 284 23 2 8003 8285 511412489 511412771 1.300000e-102 385.0
11 TraesCS1D01G320800 chr1A 81.928 166 13 10 3690 3847 511407298 511407454 3.140000e-24 124.0
12 TraesCS1D01G320800 chr1B 90.802 2805 162 29 4979 7750 559966351 559969092 0.000000e+00 3663.0
13 TraesCS1D01G320800 chr1B 90.358 2572 127 53 564 3051 559962011 559964545 0.000000e+00 3264.0
14 TraesCS1D01G320800 chr1B 87.276 558 35 14 2995 3538 559964522 559965057 9.200000e-169 604.0
15 TraesCS1D01G320800 chr1B 81.481 729 77 37 3534 4216 559965084 559965800 5.660000e-151 545.0
16 TraesCS1D01G320800 chr1B 86.770 257 27 6 8003 8256 560014017 560014269 6.330000e-71 279.0
17 TraesCS1D01G320800 chr1B 82.308 260 19 10 4624 4868 559965992 559966239 5.070000e-47 200.0
18 TraesCS1D01G320800 chr1B 94.545 55 3 0 4278 4332 559965859 559965913 1.480000e-12 86.1
19 TraesCS1D01G320800 chr1B 100.000 28 0 0 2509 2536 75073711 75073684 1.500000e-02 52.8
20 TraesCS1D01G320800 chr4D 89.552 670 58 6 981 1646 289299630 289300291 0.000000e+00 839.0
21 TraesCS1D01G320800 chr4D 90.968 155 13 1 7999 8153 20454381 20454534 3.030000e-49 207.0
22 TraesCS1D01G320800 chr4D 92.754 69 5 0 7755 7823 455267133 455267065 5.290000e-17 100.0
23 TraesCS1D01G320800 chr3A 80.464 517 77 18 1804 2305 568160821 568160314 2.820000e-99 374.0
24 TraesCS1D01G320800 chr3B 79.497 517 82 19 1804 2305 562453819 562453312 6.160000e-91 346.0
25 TraesCS1D01G320800 chr3B 85.821 134 19 0 7835 7968 543465198 543465331 8.670000e-30 143.0
26 TraesCS1D01G320800 chr3B 88.750 80 9 0 2226 2305 795547938 795548017 1.900000e-16 99.0
27 TraesCS1D01G320800 chr3B 94.872 39 2 0 7749 7787 239256416 239256454 2.500000e-05 62.1
28 TraesCS1D01G320800 chr3B 100.000 28 0 0 2509 2536 820477662 820477635 1.500000e-02 52.8
29 TraesCS1D01G320800 chr3D 79.151 518 82 21 1804 2305 430157977 430157470 1.330000e-87 335.0
30 TraesCS1D01G320800 chr3D 91.083 157 13 1 7999 8154 417156593 417156749 2.340000e-50 211.0
31 TraesCS1D01G320800 chr3D 86.567 134 18 0 7835 7968 417156459 417156592 1.860000e-31 148.0
32 TraesCS1D01G320800 chr3D 90.000 80 8 0 7755 7834 505023807 505023728 4.090000e-18 104.0
33 TraesCS1D01G320800 chr5D 93.421 152 9 1 8003 8154 395694205 395694055 3.010000e-54 224.0
34 TraesCS1D01G320800 chr2B 91.946 149 12 0 8006 8154 690213169 690213317 8.430000e-50 209.0
35 TraesCS1D01G320800 chr2B 83.908 87 7 4 2475 2561 632858830 632858909 8.920000e-10 76.8
36 TraesCS1D01G320800 chr2B 93.333 45 3 0 7752 7796 107096393 107096437 5.370000e-07 67.6
37 TraesCS1D01G320800 chr2B 100.000 28 0 0 2509 2536 737940943 737940916 1.500000e-02 52.8
38 TraesCS1D01G320800 chrUn 91.391 151 13 0 8003 8153 91866605 91866755 3.030000e-49 207.0
39 TraesCS1D01G320800 chrUn 89.091 55 5 1 7748 7801 329307849 329307795 5.370000e-07 67.6
40 TraesCS1D01G320800 chrUn 89.091 55 5 1 7748 7801 338307328 338307382 5.370000e-07 67.6
41 TraesCS1D01G320800 chr2D 90.385 156 15 0 7999 8154 645994838 645994683 1.090000e-48 206.0
42 TraesCS1D01G320800 chr2D 90.000 80 8 0 7755 7834 107911155 107911076 4.090000e-18 104.0
43 TraesCS1D01G320800 chr2D 100.000 29 0 0 4918 4946 49201086 49201058 4.000000e-03 54.7
44 TraesCS1D01G320800 chr7B 81.250 256 44 3 1937 2190 651381218 651381471 3.920000e-48 204.0
45 TraesCS1D01G320800 chr5B 86.325 117 8 5 1936 2045 539317004 539317119 4.060000e-23 121.0
46 TraesCS1D01G320800 chr5B 86.325 117 8 5 1936 2045 625097325 625097440 4.060000e-23 121.0
47 TraesCS1D01G320800 chr5B 86.325 117 8 5 1936 2045 628676875 628676990 4.060000e-23 121.0
48 TraesCS1D01G320800 chr2A 91.071 56 4 1 7748 7802 39727227 39727282 3.210000e-09 75.0
49 TraesCS1D01G320800 chr6B 100.000 28 0 0 2509 2536 641752362 641752389 1.500000e-02 52.8
50 TraesCS1D01G320800 chr6B 100.000 28 0 0 2509 2536 716568913 716568940 1.500000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G320800 chr1D 414501806 414510092 8286 False 7359.500000 14412 100.000 1 8287 2 chr1D.!!$F3 8286
1 TraesCS1D01G320800 chr1A 511404013 511412771 8758 False 1475.166667 3958 86.717 517 8285 6 chr1A.!!$F1 7768
2 TraesCS1D01G320800 chr1B 559962011 559969092 7081 False 1393.683333 3663 87.795 564 7750 6 chr1B.!!$F2 7186
3 TraesCS1D01G320800 chr4D 289299630 289300291 661 False 839.000000 839 89.552 981 1646 1 chr4D.!!$F2 665
4 TraesCS1D01G320800 chr3A 568160314 568160821 507 True 374.000000 374 80.464 1804 2305 1 chr3A.!!$R1 501
5 TraesCS1D01G320800 chr3B 562453312 562453819 507 True 346.000000 346 79.497 1804 2305 1 chr3B.!!$R1 501
6 TraesCS1D01G320800 chr3D 430157470 430157977 507 True 335.000000 335 79.151 1804 2305 1 chr3D.!!$R1 501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
102 103 0.028902 CCGCAAAAGCTATTACCGGC 59.971 55.0 0.00 0.00 0.00 6.13 F
156 157 0.033405 TACCGACCAGGAGAAGGAGG 60.033 60.0 0.00 0.00 45.00 4.30 F
507 508 0.108992 GACGTTCGGCATGACCTGTA 60.109 55.0 0.00 0.00 35.61 2.74 F
639 640 0.117541 TACTGCAAGGGGTAGGGTCA 59.882 55.0 0.00 0.00 39.30 4.02 F
2340 2386 0.462225 TCCGTTCCGTTTGCACTCAA 60.462 50.0 0.00 0.00 0.00 3.02 F
3354 3573 0.031721 GACGGATACCCCATGTCGAC 59.968 60.0 9.11 9.11 34.14 4.20 F
3730 4048 0.034896 CTCCTACACCACACCACACC 59.965 60.0 0.00 0.00 0.00 4.16 F
3980 4307 0.036671 GGTCCAGGTCACCGGTAAAG 60.037 60.0 6.87 0.00 0.00 1.85 F
4628 5008 0.037697 TGTACGTGTGCCACATCCTC 60.038 55.0 0.00 0.00 33.40 3.71 F
6561 7032 0.035820 TTACATGGTCGGTTCCCTGC 60.036 55.0 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1386 1426 1.741770 GTTCCCGCTGTCGAGCAAT 60.742 57.895 0.0 0.00 46.62 3.56 R
1392 1432 3.966026 GACGAGGTTCCCGCTGTCG 62.966 68.421 0.0 0.00 36.71 4.35 R
2469 2526 0.038744 AGGTTCAGATGCCAACCCAG 59.961 55.000 0.0 0.00 42.85 4.45 R
2610 2683 2.779506 CCCCTCACTGACTAAACAACC 58.220 52.381 0.0 0.00 0.00 3.77 R
3655 3924 0.038166 GCTTGGGGTGGACTCATCAA 59.962 55.000 0.0 0.00 0.00 2.57 R
4697 5077 0.039708 GTGCAAAGTGAAGGCTGCTC 60.040 55.000 0.0 0.00 35.78 4.26 R
5331 5770 0.246635 TTCTCGGACTTGCTAGGTGC 59.753 55.000 0.0 0.00 43.25 5.01 R
5905 6368 0.446222 ATTTTCAATCCGACGCGTGG 59.554 50.000 20.7 17.39 0.00 4.94 R
6570 7041 0.030369 CGTACTCGGGAGCCATGTAC 59.970 60.000 0.0 0.00 32.51 2.90 R
8050 9675 0.106769 TTGCTCCAGTCCAAGTGCAA 60.107 50.000 0.0 0.00 39.42 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.472263 CGGCAACCACAAAAGCTAC 57.528 52.632 0.00 0.00 0.00 3.58
19 20 0.951558 CGGCAACCACAAAAGCTACT 59.048 50.000 0.00 0.00 0.00 2.57
20 21 2.147958 CGGCAACCACAAAAGCTACTA 58.852 47.619 0.00 0.00 0.00 1.82
21 22 2.095919 CGGCAACCACAAAAGCTACTAC 60.096 50.000 0.00 0.00 0.00 2.73
22 23 2.228103 GGCAACCACAAAAGCTACTACC 59.772 50.000 0.00 0.00 0.00 3.18
23 24 2.095919 GCAACCACAAAAGCTACTACCG 60.096 50.000 0.00 0.00 0.00 4.02
24 25 3.395639 CAACCACAAAAGCTACTACCGA 58.604 45.455 0.00 0.00 0.00 4.69
25 26 3.036075 ACCACAAAAGCTACTACCGAC 57.964 47.619 0.00 0.00 0.00 4.79
26 27 1.990563 CCACAAAAGCTACTACCGACG 59.009 52.381 0.00 0.00 0.00 5.12
27 28 2.352030 CCACAAAAGCTACTACCGACGA 60.352 50.000 0.00 0.00 0.00 4.20
28 29 2.915463 CACAAAAGCTACTACCGACGAG 59.085 50.000 0.00 0.00 0.00 4.18
29 30 2.555757 ACAAAAGCTACTACCGACGAGT 59.444 45.455 0.00 0.00 0.00 4.18
30 31 3.005155 ACAAAAGCTACTACCGACGAGTT 59.995 43.478 0.00 0.00 0.00 3.01
31 32 3.930634 AAAGCTACTACCGACGAGTTT 57.069 42.857 0.00 0.00 0.00 2.66
32 33 3.930634 AAGCTACTACCGACGAGTTTT 57.069 42.857 0.00 0.00 0.00 2.43
33 34 3.930634 AGCTACTACCGACGAGTTTTT 57.069 42.857 0.00 0.00 0.00 1.94
48 49 2.634777 TTTTTGGCTTCGACGGCG 59.365 55.556 2.87 2.87 39.35 6.46
49 50 2.181521 TTTTTGGCTTCGACGGCGT 61.182 52.632 14.65 14.65 38.98 5.68
50 51 2.108344 TTTTTGGCTTCGACGGCGTC 62.108 55.000 29.06 29.06 38.98 5.19
51 52 3.793775 TTTGGCTTCGACGGCGTCA 62.794 57.895 35.62 21.69 38.98 4.35
52 53 4.717629 TGGCTTCGACGGCGTCAG 62.718 66.667 35.62 27.30 38.98 3.51
54 55 4.415332 GCTTCGACGGCGTCAGGA 62.415 66.667 35.62 24.20 38.98 3.86
55 56 2.504244 CTTCGACGGCGTCAGGAC 60.504 66.667 35.62 13.02 38.98 3.85
70 71 2.707902 GGACGGGATCCTGAATTGC 58.292 57.895 27.90 6.50 45.22 3.56
71 72 0.181350 GGACGGGATCCTGAATTGCT 59.819 55.000 27.90 2.80 45.22 3.91
72 73 1.416401 GGACGGGATCCTGAATTGCTA 59.584 52.381 27.90 0.00 45.22 3.49
73 74 2.484889 GACGGGATCCTGAATTGCTAC 58.515 52.381 27.90 0.00 0.00 3.58
74 75 1.202533 ACGGGATCCTGAATTGCTACG 60.203 52.381 27.90 12.51 0.00 3.51
75 76 1.068588 CGGGATCCTGAATTGCTACGA 59.931 52.381 16.28 0.00 0.00 3.43
76 77 2.484889 GGGATCCTGAATTGCTACGAC 58.515 52.381 12.58 0.00 0.00 4.34
77 78 2.484889 GGATCCTGAATTGCTACGACC 58.515 52.381 3.84 0.00 0.00 4.79
78 79 2.128035 GATCCTGAATTGCTACGACCG 58.872 52.381 0.00 0.00 0.00 4.79
79 80 1.179152 TCCTGAATTGCTACGACCGA 58.821 50.000 0.00 0.00 0.00 4.69
80 81 1.135199 TCCTGAATTGCTACGACCGAC 60.135 52.381 0.00 0.00 0.00 4.79
81 82 1.403647 CCTGAATTGCTACGACCGACA 60.404 52.381 0.00 0.00 0.00 4.35
82 83 2.333926 CTGAATTGCTACGACCGACAA 58.666 47.619 0.00 0.00 0.00 3.18
83 84 2.063266 TGAATTGCTACGACCGACAAC 58.937 47.619 0.00 0.00 0.00 3.32
84 85 1.392510 GAATTGCTACGACCGACAACC 59.607 52.381 0.00 0.00 0.00 3.77
85 86 0.734942 ATTGCTACGACCGACAACCG 60.735 55.000 0.00 0.00 38.18 4.44
86 87 3.177249 GCTACGACCGACAACCGC 61.177 66.667 0.00 0.00 36.84 5.68
87 88 2.256158 CTACGACCGACAACCGCA 59.744 61.111 0.00 0.00 36.84 5.69
88 89 1.372004 CTACGACCGACAACCGCAA 60.372 57.895 0.00 0.00 36.84 4.85
89 90 0.940519 CTACGACCGACAACCGCAAA 60.941 55.000 0.00 0.00 36.84 3.68
90 91 0.529337 TACGACCGACAACCGCAAAA 60.529 50.000 0.00 0.00 36.84 2.44
91 92 1.083015 CGACCGACAACCGCAAAAG 60.083 57.895 0.00 0.00 36.84 2.27
92 93 1.370051 GACCGACAACCGCAAAAGC 60.370 57.895 0.00 0.00 36.84 3.51
93 94 1.782028 GACCGACAACCGCAAAAGCT 61.782 55.000 0.00 0.00 36.84 3.74
94 95 0.533308 ACCGACAACCGCAAAAGCTA 60.533 50.000 0.00 0.00 36.84 3.32
95 96 0.802494 CCGACAACCGCAAAAGCTAT 59.198 50.000 0.00 0.00 36.84 2.97
96 97 1.199097 CCGACAACCGCAAAAGCTATT 59.801 47.619 0.00 0.00 36.84 1.73
97 98 2.417239 CCGACAACCGCAAAAGCTATTA 59.583 45.455 0.00 0.00 36.84 0.98
98 99 3.413558 CGACAACCGCAAAAGCTATTAC 58.586 45.455 0.00 0.00 0.00 1.89
99 100 3.726782 CGACAACCGCAAAAGCTATTACC 60.727 47.826 0.00 0.00 0.00 2.85
100 101 2.160813 ACAACCGCAAAAGCTATTACCG 59.839 45.455 0.00 0.00 0.00 4.02
101 102 1.375551 ACCGCAAAAGCTATTACCGG 58.624 50.000 0.00 0.00 40.01 5.28
102 103 0.028902 CCGCAAAAGCTATTACCGGC 59.971 55.000 0.00 0.00 0.00 6.13
103 104 0.315869 CGCAAAAGCTATTACCGGCG 60.316 55.000 0.00 0.00 37.17 6.46
104 105 1.011333 GCAAAAGCTATTACCGGCGA 58.989 50.000 9.30 0.00 0.00 5.54
105 106 1.003866 GCAAAAGCTATTACCGGCGAG 60.004 52.381 9.30 0.06 0.00 5.03
106 107 2.277084 CAAAAGCTATTACCGGCGAGT 58.723 47.619 9.30 7.43 0.00 4.18
107 108 2.676342 CAAAAGCTATTACCGGCGAGTT 59.324 45.455 9.30 0.00 0.00 3.01
108 109 2.685850 AAGCTATTACCGGCGAGTTT 57.314 45.000 9.30 0.00 0.00 2.66
109 110 2.220479 AGCTATTACCGGCGAGTTTC 57.780 50.000 9.30 0.00 0.00 2.78
110 111 1.755380 AGCTATTACCGGCGAGTTTCT 59.245 47.619 9.30 0.00 0.00 2.52
111 112 2.167900 AGCTATTACCGGCGAGTTTCTT 59.832 45.455 9.30 0.00 0.00 2.52
112 113 2.934553 GCTATTACCGGCGAGTTTCTTT 59.065 45.455 9.30 0.00 0.00 2.52
113 114 3.373130 GCTATTACCGGCGAGTTTCTTTT 59.627 43.478 9.30 0.00 0.00 2.27
114 115 3.824414 ATTACCGGCGAGTTTCTTTTG 57.176 42.857 9.30 0.00 0.00 2.44
115 116 0.869730 TACCGGCGAGTTTCTTTTGC 59.130 50.000 9.30 0.00 0.00 3.68
116 117 0.818040 ACCGGCGAGTTTCTTTTGCT 60.818 50.000 9.30 0.00 0.00 3.91
117 118 0.310854 CCGGCGAGTTTCTTTTGCTT 59.689 50.000 9.30 0.00 0.00 3.91
118 119 1.663161 CCGGCGAGTTTCTTTTGCTTC 60.663 52.381 9.30 0.00 0.00 3.86
119 120 1.674908 GGCGAGTTTCTTTTGCTTCG 58.325 50.000 0.00 0.00 0.00 3.79
120 121 1.263217 GGCGAGTTTCTTTTGCTTCGA 59.737 47.619 0.00 0.00 0.00 3.71
121 122 2.095718 GGCGAGTTTCTTTTGCTTCGAT 60.096 45.455 0.00 0.00 0.00 3.59
122 123 2.904932 GCGAGTTTCTTTTGCTTCGATG 59.095 45.455 0.00 0.00 0.00 3.84
123 124 3.482786 CGAGTTTCTTTTGCTTCGATGG 58.517 45.455 0.00 0.00 0.00 3.51
124 125 3.058914 CGAGTTTCTTTTGCTTCGATGGT 60.059 43.478 0.00 0.00 0.00 3.55
125 126 4.222114 GAGTTTCTTTTGCTTCGATGGTG 58.778 43.478 0.00 0.00 0.00 4.17
126 127 3.882888 AGTTTCTTTTGCTTCGATGGTGA 59.117 39.130 0.00 0.00 0.00 4.02
127 128 3.896648 TTCTTTTGCTTCGATGGTGAC 57.103 42.857 0.00 0.00 0.00 3.67
128 129 1.798223 TCTTTTGCTTCGATGGTGACG 59.202 47.619 0.00 0.00 0.00 4.35
129 130 0.871722 TTTTGCTTCGATGGTGACGG 59.128 50.000 0.00 0.00 0.00 4.79
130 131 0.953471 TTTGCTTCGATGGTGACGGG 60.953 55.000 0.00 0.00 0.00 5.28
131 132 2.511600 GCTTCGATGGTGACGGGG 60.512 66.667 0.00 0.00 0.00 5.73
132 133 2.186903 CTTCGATGGTGACGGGGG 59.813 66.667 0.00 0.00 0.00 5.40
146 147 3.306379 GGGGGAAGTACCGACCAG 58.694 66.667 0.00 0.00 40.11 4.00
148 149 1.305549 GGGGAAGTACCGACCAGGA 60.306 63.158 0.00 0.00 45.00 3.86
149 150 1.328430 GGGGAAGTACCGACCAGGAG 61.328 65.000 0.00 0.00 45.00 3.69
150 151 0.324091 GGGAAGTACCGACCAGGAGA 60.324 60.000 0.00 0.00 45.00 3.71
151 152 1.553706 GGAAGTACCGACCAGGAGAA 58.446 55.000 0.00 0.00 45.00 2.87
152 153 1.477295 GGAAGTACCGACCAGGAGAAG 59.523 57.143 0.00 0.00 45.00 2.85
153 154 1.477295 GAAGTACCGACCAGGAGAAGG 59.523 57.143 0.00 0.00 45.00 3.46
154 155 0.702902 AGTACCGACCAGGAGAAGGA 59.297 55.000 0.00 0.00 45.00 3.36
155 156 1.104630 GTACCGACCAGGAGAAGGAG 58.895 60.000 0.00 0.00 45.00 3.69
156 157 0.033405 TACCGACCAGGAGAAGGAGG 60.033 60.000 0.00 0.00 45.00 4.30
157 158 2.726351 CCGACCAGGAGAAGGAGGC 61.726 68.421 0.00 0.00 45.00 4.70
158 159 2.896443 GACCAGGAGAAGGAGGCG 59.104 66.667 0.00 0.00 0.00 5.52
159 160 2.685380 ACCAGGAGAAGGAGGCGG 60.685 66.667 0.00 0.00 0.00 6.13
160 161 2.685380 CCAGGAGAAGGAGGCGGT 60.685 66.667 0.00 0.00 0.00 5.68
161 162 2.581354 CAGGAGAAGGAGGCGGTG 59.419 66.667 0.00 0.00 0.00 4.94
162 163 2.120718 AGGAGAAGGAGGCGGTGT 59.879 61.111 0.00 0.00 0.00 4.16
163 164 2.266055 GGAGAAGGAGGCGGTGTG 59.734 66.667 0.00 0.00 0.00 3.82
164 165 2.283529 GGAGAAGGAGGCGGTGTGA 61.284 63.158 0.00 0.00 0.00 3.58
165 166 1.216710 GAGAAGGAGGCGGTGTGAG 59.783 63.158 0.00 0.00 0.00 3.51
500 501 2.202171 GCAACGACGTTCGGCATG 60.202 61.111 10.95 0.00 45.59 4.06
501 502 2.663478 GCAACGACGTTCGGCATGA 61.663 57.895 10.95 0.00 45.59 3.07
502 503 1.129809 CAACGACGTTCGGCATGAC 59.870 57.895 10.95 0.00 45.59 3.06
503 504 2.025418 AACGACGTTCGGCATGACC 61.025 57.895 7.57 0.00 45.59 4.02
504 505 2.126071 CGACGTTCGGCATGACCT 60.126 61.111 0.00 0.00 36.00 3.85
505 506 2.444624 CGACGTTCGGCATGACCTG 61.445 63.158 0.00 0.00 36.00 4.00
506 507 1.374252 GACGTTCGGCATGACCTGT 60.374 57.895 0.00 0.00 35.61 4.00
507 508 0.108992 GACGTTCGGCATGACCTGTA 60.109 55.000 0.00 0.00 35.61 2.74
508 509 0.319083 ACGTTCGGCATGACCTGTAA 59.681 50.000 0.00 0.00 35.61 2.41
509 510 1.270412 ACGTTCGGCATGACCTGTAAA 60.270 47.619 0.00 0.00 35.61 2.01
510 511 1.127951 CGTTCGGCATGACCTGTAAAC 59.872 52.381 0.00 0.00 35.61 2.01
511 512 1.127951 GTTCGGCATGACCTGTAAACG 59.872 52.381 0.00 0.00 35.61 3.60
512 513 0.604073 TCGGCATGACCTGTAAACGA 59.396 50.000 0.00 0.00 35.61 3.85
513 514 0.999406 CGGCATGACCTGTAAACGAG 59.001 55.000 0.00 0.00 35.61 4.18
514 515 1.369625 GGCATGACCTGTAAACGAGG 58.630 55.000 0.00 0.00 36.57 4.63
515 516 0.727398 GCATGACCTGTAAACGAGGC 59.273 55.000 0.00 0.00 33.39 4.70
520 521 0.601841 ACCTGTAAACGAGGCAACGG 60.602 55.000 8.70 0.00 46.39 4.44
523 524 2.036571 GTAAACGAGGCAACGGGGG 61.037 63.158 8.70 0.00 46.39 5.40
535 536 4.090588 CGGGGGAAGGCGTGCTTA 62.091 66.667 0.00 0.00 0.00 3.09
536 537 2.595655 GGGGGAAGGCGTGCTTAT 59.404 61.111 0.00 0.00 0.00 1.73
540 541 1.407712 GGGGAAGGCGTGCTTATTACA 60.408 52.381 0.00 0.00 0.00 2.41
553 554 3.393800 CTTATTACAGGGGATGCGTCAG 58.606 50.000 8.47 0.00 0.00 3.51
562 563 4.101448 ATGCGTCAGGGTGCCTCC 62.101 66.667 0.00 0.00 0.00 4.30
621 622 2.688446 CCACAACTAGCGATGAGACCTA 59.312 50.000 0.00 0.00 0.00 3.08
626 627 1.950216 CTAGCGATGAGACCTACTGCA 59.050 52.381 0.00 0.00 0.00 4.41
639 640 0.117541 TACTGCAAGGGGTAGGGTCA 59.882 55.000 0.00 0.00 39.30 4.02
640 641 0.550147 ACTGCAAGGGGTAGGGTCAT 60.550 55.000 0.00 0.00 39.30 3.06
707 721 3.055385 CGGGAGGAAGACAATGGTAGAAA 60.055 47.826 0.00 0.00 0.00 2.52
713 727 7.264294 AGGAAGACAATGGTAGAAAGAAGAT 57.736 36.000 0.00 0.00 0.00 2.40
720 740 1.475213 GGTAGAAAGAAGATGGCCCGG 60.475 57.143 0.00 0.00 0.00 5.73
731 751 1.500783 ATGGCCCGGGGGATCTAATG 61.501 60.000 25.28 0.00 37.50 1.90
732 754 2.757077 GCCCGGGGGATCTAATGG 59.243 66.667 25.28 0.00 37.50 3.16
755 783 4.987963 ATGGCCAATGAGACATAGATCA 57.012 40.909 10.96 0.00 0.00 2.92
756 784 4.347360 TGGCCAATGAGACATAGATCAG 57.653 45.455 0.61 0.00 0.00 2.90
758 786 4.596212 TGGCCAATGAGACATAGATCAGAT 59.404 41.667 0.61 0.00 0.00 2.90
763 791 6.427242 CCAATGAGACATAGATCAGATGGTTG 59.573 42.308 11.17 7.96 34.25 3.77
771 799 1.987807 ATCAGATGGTTGGGGAGGCG 61.988 60.000 0.00 0.00 0.00 5.52
848 876 4.056050 ACTTAGCAAATTCGACGACACTT 58.944 39.130 0.00 0.00 0.00 3.16
849 877 4.510340 ACTTAGCAAATTCGACGACACTTT 59.490 37.500 0.00 0.00 0.00 2.66
945 975 2.892425 GCTCCCGTCATCCTTGCG 60.892 66.667 0.00 0.00 0.00 4.85
1182 1222 1.562575 CCAACAACACCTACGTCGGC 61.563 60.000 5.94 0.00 0.00 5.54
1290 1330 4.477975 GCGACCCTGTCCGTCTCG 62.478 72.222 0.00 0.00 0.00 4.04
1776 1816 3.492311 GAGCATCGTCTCCCGCCTC 62.492 68.421 0.00 0.00 36.19 4.70
1777 1817 3.838271 GCATCGTCTCCCGCCTCA 61.838 66.667 0.00 0.00 36.19 3.86
2340 2386 0.462225 TCCGTTCCGTTTGCACTCAA 60.462 50.000 0.00 0.00 0.00 3.02
2420 2476 4.653341 TGATGGTTCTTGGTTGGTGAAAAT 59.347 37.500 0.00 0.00 0.00 1.82
2444 2501 2.500504 GTTCCGTCCTATCCTTTGGTCT 59.499 50.000 0.00 0.00 0.00 3.85
2447 2504 3.703052 TCCGTCCTATCCTTTGGTCTAAC 59.297 47.826 0.00 0.00 0.00 2.34
2448 2505 3.705072 CCGTCCTATCCTTTGGTCTAACT 59.295 47.826 0.00 0.00 0.00 2.24
2449 2506 4.161754 CCGTCCTATCCTTTGGTCTAACTT 59.838 45.833 0.00 0.00 0.00 2.66
2450 2507 5.361857 CCGTCCTATCCTTTGGTCTAACTTA 59.638 44.000 0.00 0.00 0.00 2.24
2451 2508 6.461231 CCGTCCTATCCTTTGGTCTAACTTAG 60.461 46.154 0.00 0.00 0.00 2.18
2452 2509 6.320672 CGTCCTATCCTTTGGTCTAACTTAGA 59.679 42.308 0.00 0.00 0.00 2.10
2454 2511 8.198778 GTCCTATCCTTTGGTCTAACTTAGAAG 58.801 40.741 0.00 0.00 36.40 2.85
2456 2513 8.929487 CCTATCCTTTGGTCTAACTTAGAAGAT 58.071 37.037 0.00 0.92 36.40 2.40
2463 2520 9.654663 TTTGGTCTAACTTAGAAGATTTAGAGC 57.345 33.333 16.96 16.96 44.11 4.09
2464 2521 7.783042 TGGTCTAACTTAGAAGATTTAGAGCC 58.217 38.462 19.06 14.52 43.60 4.70
2465 2522 7.399191 TGGTCTAACTTAGAAGATTTAGAGCCA 59.601 37.037 19.06 15.90 43.60 4.75
2466 2523 7.923878 GGTCTAACTTAGAAGATTTAGAGCCAG 59.076 40.741 14.77 0.00 40.66 4.85
2467 2524 7.436970 GTCTAACTTAGAAGATTTAGAGCCAGC 59.563 40.741 0.00 0.00 36.40 4.85
2469 2526 5.912892 ACTTAGAAGATTTAGAGCCAGCTC 58.087 41.667 11.78 11.78 43.03 4.09
2486 2553 1.457346 CTCTGGGTTGGCATCTGAAC 58.543 55.000 0.00 0.00 0.00 3.18
2610 2683 3.838120 TGTCAGAACTAGATCTTGCACG 58.162 45.455 0.00 0.00 0.00 5.34
2646 2719 2.270986 GGGCCTTGCTCCAGTGTTG 61.271 63.158 0.84 0.00 0.00 3.33
2760 2851 5.671493 CGGTCCAACTGTCCTCTTATTATT 58.329 41.667 0.00 0.00 0.00 1.40
2763 2854 7.438459 CGGTCCAACTGTCCTCTTATTATTAAG 59.562 40.741 0.00 0.00 36.87 1.85
2765 2856 9.668497 GTCCAACTGTCCTCTTATTATTAAGTT 57.332 33.333 4.71 0.00 36.87 2.66
2822 2921 7.549839 TGTGATCATCAAATCCTGAAAAATCC 58.450 34.615 0.00 0.00 37.67 3.01
2873 2980 1.616865 CATTGAGGGCATGGGCTAATG 59.383 52.381 0.00 0.00 40.87 1.90
2913 3024 3.057734 AGGAAACGTAAGCTTGAAGACG 58.942 45.455 15.95 15.95 45.62 4.18
2925 3036 3.553511 GCTTGAAGACGTCCATACAGATG 59.446 47.826 13.01 3.86 0.00 2.90
2931 3042 5.255710 AGACGTCCATACAGATGAGAAAG 57.744 43.478 13.01 0.00 34.73 2.62
2933 3044 4.748892 ACGTCCATACAGATGAGAAAGTG 58.251 43.478 0.00 0.00 34.73 3.16
2934 3045 3.553511 CGTCCATACAGATGAGAAAGTGC 59.446 47.826 0.00 0.00 34.73 4.40
2945 3099 3.896122 TGAGAAAGTGCGGTTAATTTGC 58.104 40.909 0.00 0.00 0.00 3.68
2954 3108 2.979813 GCGGTTAATTTGCTGTCACTTG 59.020 45.455 0.00 0.00 0.00 3.16
2959 3113 5.912955 GGTTAATTTGCTGTCACTTGTACAC 59.087 40.000 0.00 0.00 0.00 2.90
2988 3148 2.562296 AGGGGAGGAAAGTTGATGCTA 58.438 47.619 0.00 0.00 0.00 3.49
2998 3158 8.767478 AGGAAAGTTGATGCTATTTTGAAATG 57.233 30.769 0.00 0.00 0.00 2.32
3019 3179 0.240945 GGGGAAAGTTGATGCGTGTG 59.759 55.000 0.00 0.00 0.00 3.82
3048 3246 5.726980 TGAAATTGGAGGAAAGTTGATGG 57.273 39.130 0.00 0.00 0.00 3.51
3063 3274 4.660303 AGTTGATGGTGATATGCCCTAGAA 59.340 41.667 0.00 0.00 0.00 2.10
3114 3325 8.220755 TCTTCCTTTGATTGGGTTTATTATCG 57.779 34.615 0.00 0.00 0.00 2.92
3165 3376 0.946221 GAGCTGGACCGCGATAATGG 60.946 60.000 8.23 0.00 34.40 3.16
3272 3491 7.429636 TCACCACTTATTAGAAAAACGAAGG 57.570 36.000 0.00 0.00 0.00 3.46
3284 3503 2.278857 CGAAGGATCGGACGCCAG 60.279 66.667 2.09 0.00 45.32 4.85
3337 3556 0.184451 ATGATGATGCCCACCCTGAC 59.816 55.000 0.00 0.00 0.00 3.51
3354 3573 0.031721 GACGGATACCCCATGTCGAC 59.968 60.000 9.11 9.11 34.14 4.20
3355 3574 1.007734 CGGATACCCCATGTCGACG 60.008 63.158 11.62 0.00 34.14 5.12
3356 3575 1.449726 CGGATACCCCATGTCGACGA 61.450 60.000 11.62 0.00 34.14 4.20
3357 3576 0.966920 GGATACCCCATGTCGACGAT 59.033 55.000 11.62 2.87 34.14 3.73
3358 3577 1.067776 GGATACCCCATGTCGACGATC 60.068 57.143 11.62 4.85 34.14 3.69
3359 3578 0.966920 ATACCCCATGTCGACGATCC 59.033 55.000 11.62 0.00 0.00 3.36
3360 3579 1.111116 TACCCCATGTCGACGATCCC 61.111 60.000 11.62 0.00 0.00 3.85
3448 3675 2.287368 CGTTTTGCAAGGGGTACAGTTC 60.287 50.000 0.00 0.00 0.00 3.01
3545 3772 1.201587 CCGAAACGCGTACAAAGTACG 60.202 52.381 14.46 21.45 43.13 3.67
3548 3775 2.697431 AACGCGTACAAAGTACGGTA 57.303 45.000 25.20 0.00 40.86 4.02
3560 3823 3.939740 AGTACGGTAGTATCCTGGTGA 57.060 47.619 0.00 0.00 35.01 4.02
3571 3834 0.321564 TCCTGGTGATGTGGCTTTCG 60.322 55.000 0.00 0.00 0.00 3.46
3600 3869 1.812922 CTGATGCAGACCTGACGGC 60.813 63.158 0.47 0.00 32.44 5.68
3602 3871 4.457496 ATGCAGACCTGACGGCCG 62.457 66.667 26.86 26.86 0.00 6.13
3680 3956 1.832167 GTCCACCCCAAGCAAGCAA 60.832 57.895 0.00 0.00 0.00 3.91
3718 4036 2.946990 CAATCATGCATGCACTCCTACA 59.053 45.455 25.37 1.33 0.00 2.74
3719 4037 2.028420 TCATGCATGCACTCCTACAC 57.972 50.000 25.37 0.00 0.00 2.90
3720 4038 1.019673 CATGCATGCACTCCTACACC 58.980 55.000 25.37 0.00 0.00 4.16
3721 4039 0.620030 ATGCATGCACTCCTACACCA 59.380 50.000 25.37 0.00 0.00 4.17
3722 4040 0.321564 TGCATGCACTCCTACACCAC 60.322 55.000 18.46 0.00 0.00 4.16
3723 4041 0.321564 GCATGCACTCCTACACCACA 60.322 55.000 14.21 0.00 0.00 4.17
3724 4042 1.442769 CATGCACTCCTACACCACAC 58.557 55.000 0.00 0.00 0.00 3.82
3725 4043 0.324943 ATGCACTCCTACACCACACC 59.675 55.000 0.00 0.00 0.00 4.16
3726 4044 1.051556 TGCACTCCTACACCACACCA 61.052 55.000 0.00 0.00 0.00 4.17
3727 4045 0.602905 GCACTCCTACACCACACCAC 60.603 60.000 0.00 0.00 0.00 4.16
3728 4046 0.756294 CACTCCTACACCACACCACA 59.244 55.000 0.00 0.00 0.00 4.17
3729 4047 0.756903 ACTCCTACACCACACCACAC 59.243 55.000 0.00 0.00 0.00 3.82
3730 4048 0.034896 CTCCTACACCACACCACACC 59.965 60.000 0.00 0.00 0.00 4.16
3731 4049 0.691413 TCCTACACCACACCACACCA 60.691 55.000 0.00 0.00 0.00 4.17
3815 4140 3.983494 AGCAGCTCAGCACGTCGT 61.983 61.111 0.00 0.00 36.85 4.34
3817 4142 2.256764 CAGCTCAGCACGTCGTCT 59.743 61.111 0.00 0.00 0.00 4.18
3822 4147 1.004277 CTCAGCACGTCGTCTTCACC 61.004 60.000 0.00 0.00 0.00 4.02
3843 4170 1.768684 TTTCAGAGTCGGCCCTGCTT 61.769 55.000 0.00 0.00 0.00 3.91
3895 4222 3.984749 GATCTCCCGGCGCTCCTC 61.985 72.222 7.64 0.00 0.00 3.71
3935 4262 4.296265 GGCGATCCGTTTCCTTGT 57.704 55.556 0.00 0.00 0.00 3.16
3937 4264 1.134694 GCGATCCGTTTCCTTGTGC 59.865 57.895 0.00 0.00 0.00 4.57
3963 4290 0.041663 CGATTTCGTGTTGCAACGGT 60.042 50.000 23.79 6.50 43.73 4.83
3965 4292 0.309612 ATTTCGTGTTGCAACGGTCC 59.690 50.000 23.79 10.97 43.73 4.46
3968 4295 2.892334 CGTGTTGCAACGGTCCAGG 61.892 63.158 23.79 8.50 39.89 4.45
3969 4296 1.822186 GTGTTGCAACGGTCCAGGT 60.822 57.895 23.79 0.00 0.00 4.00
3972 4299 1.525077 TTGCAACGGTCCAGGTCAC 60.525 57.895 0.00 0.00 0.00 3.67
3973 4300 2.668550 GCAACGGTCCAGGTCACC 60.669 66.667 0.00 0.00 0.00 4.02
3978 4305 3.795905 GGTCCAGGTCACCGGTAA 58.204 61.111 6.87 0.00 0.00 2.85
3979 4306 2.060370 GGTCCAGGTCACCGGTAAA 58.940 57.895 6.87 0.00 0.00 2.01
3980 4307 0.036671 GGTCCAGGTCACCGGTAAAG 60.037 60.000 6.87 0.00 0.00 1.85
3981 4308 0.672711 GTCCAGGTCACCGGTAAAGC 60.673 60.000 6.87 8.68 0.00 3.51
3982 4309 1.740296 CCAGGTCACCGGTAAAGCG 60.740 63.158 6.87 5.15 0.00 4.68
4007 4342 3.290710 GAGCATCCAGGCCAAATTTAGA 58.709 45.455 5.01 0.00 0.00 2.10
4008 4343 3.294214 AGCATCCAGGCCAAATTTAGAG 58.706 45.455 5.01 0.00 0.00 2.43
4009 4344 3.026694 GCATCCAGGCCAAATTTAGAGT 58.973 45.455 5.01 0.00 0.00 3.24
4010 4345 3.181483 GCATCCAGGCCAAATTTAGAGTG 60.181 47.826 5.01 0.00 0.00 3.51
4011 4346 4.272489 CATCCAGGCCAAATTTAGAGTGA 58.728 43.478 5.01 0.00 0.00 3.41
4012 4347 3.955471 TCCAGGCCAAATTTAGAGTGAG 58.045 45.455 5.01 0.00 0.00 3.51
4013 4348 3.019564 CCAGGCCAAATTTAGAGTGAGG 58.980 50.000 5.01 0.00 0.00 3.86
4014 4349 2.424956 CAGGCCAAATTTAGAGTGAGGC 59.575 50.000 5.01 5.16 39.86 4.70
4015 4350 2.310052 AGGCCAAATTTAGAGTGAGGCT 59.690 45.455 5.01 0.00 40.40 4.58
4016 4351 3.523564 AGGCCAAATTTAGAGTGAGGCTA 59.476 43.478 5.01 0.00 40.40 3.93
4017 4352 3.879892 GGCCAAATTTAGAGTGAGGCTAG 59.120 47.826 11.80 0.00 40.40 3.42
4018 4353 3.313803 GCCAAATTTAGAGTGAGGCTAGC 59.686 47.826 6.04 6.04 37.67 3.42
4019 4354 4.775236 CCAAATTTAGAGTGAGGCTAGCT 58.225 43.478 15.72 0.00 0.00 3.32
4020 4355 5.189180 CCAAATTTAGAGTGAGGCTAGCTT 58.811 41.667 15.72 6.94 0.00 3.74
4021 4356 6.349300 CCAAATTTAGAGTGAGGCTAGCTTA 58.651 40.000 15.72 0.00 0.00 3.09
4022 4357 6.995091 CCAAATTTAGAGTGAGGCTAGCTTAT 59.005 38.462 15.72 0.51 0.00 1.73
4023 4358 7.500559 CCAAATTTAGAGTGAGGCTAGCTTATT 59.499 37.037 15.72 0.00 0.00 1.40
4024 4359 9.547753 CAAATTTAGAGTGAGGCTAGCTTATTA 57.452 33.333 15.72 0.00 0.00 0.98
4025 4360 9.771534 AAATTTAGAGTGAGGCTAGCTTATTAG 57.228 33.333 15.72 0.00 0.00 1.73
4038 4373 2.608090 GCTTATTAGGTGTCTCCGTTGC 59.392 50.000 0.00 0.00 41.99 4.17
4117 4463 4.635925 GTCGCGACGGATGATGAT 57.364 55.556 25.19 0.00 0.00 2.45
4127 4473 0.886490 GGATGATGATGCCCGACCAC 60.886 60.000 0.00 0.00 0.00 4.16
4171 4519 3.393278 TCTTAATATGGTAGGTGTGGGGC 59.607 47.826 0.00 0.00 0.00 5.80
4243 4613 5.144692 ACTACCGAAAGTAAGGGAGAAAC 57.855 43.478 0.04 0.00 41.01 2.78
4264 4634 1.748122 GGCCATGGCACTCTGTCTG 60.748 63.158 36.56 0.00 44.11 3.51
4271 4641 0.965439 GGCACTCTGTCTGTCTGTCT 59.035 55.000 0.00 0.00 0.00 3.41
4272 4642 1.336702 GGCACTCTGTCTGTCTGTCTG 60.337 57.143 0.00 0.00 0.00 3.51
4273 4643 1.339610 GCACTCTGTCTGTCTGTCTGT 59.660 52.381 0.00 0.00 0.00 3.41
4274 4644 2.606795 GCACTCTGTCTGTCTGTCTGTC 60.607 54.545 0.00 0.00 0.00 3.51
4275 4645 2.884012 CACTCTGTCTGTCTGTCTGTCT 59.116 50.000 0.00 0.00 0.00 3.41
4351 4721 7.505258 TGGCAAGATTAAGTATACACTGCATA 58.495 34.615 5.50 0.00 34.36 3.14
4368 4738 9.456147 ACACTGCATATTTAGTTATTTACACCA 57.544 29.630 0.00 0.00 0.00 4.17
4379 4749 9.562408 TTAGTTATTTACACCAACAGATGAACA 57.438 29.630 0.00 0.00 0.00 3.18
4380 4750 8.458573 AGTTATTTACACCAACAGATGAACAA 57.541 30.769 0.00 0.00 0.00 2.83
4381 4751 8.908903 AGTTATTTACACCAACAGATGAACAAA 58.091 29.630 0.00 0.00 0.00 2.83
4408 4778 6.759497 AACCCTAGCAATTTACTGTCATTC 57.241 37.500 0.00 0.00 0.00 2.67
4420 4790 9.739276 AATTTACTGTCATTCTTTAGTGGATCA 57.261 29.630 0.00 0.00 0.00 2.92
4434 4807 2.054799 TGGATCATAAGGGCCTACACC 58.945 52.381 6.41 5.84 0.00 4.16
4435 4808 2.054799 GGATCATAAGGGCCTACACCA 58.945 52.381 6.41 0.00 0.00 4.17
4458 4833 1.680338 AGGGTGCTGTCACTGTTTTC 58.320 50.000 0.00 0.00 42.72 2.29
4461 4836 3.118038 AGGGTGCTGTCACTGTTTTCTAA 60.118 43.478 0.00 0.00 42.72 2.10
4487 4862 6.952935 GCAGTATCATATGCTGTTAGGTAC 57.047 41.667 9.63 0.00 43.73 3.34
4488 4863 6.455647 GCAGTATCATATGCTGTTAGGTACA 58.544 40.000 9.63 0.00 43.73 2.90
4506 4881 5.428457 AGGTACATAATGATCAAGACACCCA 59.572 40.000 0.00 0.00 0.00 4.51
4507 4882 6.069673 AGGTACATAATGATCAAGACACCCAA 60.070 38.462 0.00 0.00 0.00 4.12
4508 4883 6.260936 GGTACATAATGATCAAGACACCCAAG 59.739 42.308 0.00 0.00 0.00 3.61
4509 4884 4.641989 ACATAATGATCAAGACACCCAAGC 59.358 41.667 0.00 0.00 0.00 4.01
4512 4887 2.507484 TGATCAAGACACCCAAGCAAG 58.493 47.619 0.00 0.00 0.00 4.01
4515 4890 3.228188 TCAAGACACCCAAGCAAGAAT 57.772 42.857 0.00 0.00 0.00 2.40
4516 4891 3.565307 TCAAGACACCCAAGCAAGAATT 58.435 40.909 0.00 0.00 0.00 2.17
4518 4893 5.136828 TCAAGACACCCAAGCAAGAATTAA 58.863 37.500 0.00 0.00 0.00 1.40
4528 4908 6.099341 CCAAGCAAGAATTAACAACATACCC 58.901 40.000 0.00 0.00 0.00 3.69
4535 4915 6.949715 AGAATTAACAACATACCCGGACTAA 58.050 36.000 0.73 0.00 0.00 2.24
4552 4932 1.670811 CTAATGATCGTTGCCACCACC 59.329 52.381 10.54 0.00 0.00 4.61
4553 4933 0.251121 AATGATCGTTGCCACCACCA 60.251 50.000 0.00 0.00 0.00 4.17
4554 4934 0.677731 ATGATCGTTGCCACCACCAG 60.678 55.000 0.00 0.00 0.00 4.00
4555 4935 1.003839 GATCGTTGCCACCACCAGA 60.004 57.895 0.00 0.00 0.00 3.86
4563 4943 1.856265 GCCACCACCAGAAAGCTTCG 61.856 60.000 0.00 0.00 34.02 3.79
4565 4945 1.151668 CACCACCAGAAAGCTTCGAG 58.848 55.000 0.00 0.00 34.02 4.04
4595 4975 2.542824 GCTGCGACTGAACTATCCTCTC 60.543 54.545 0.00 0.00 0.00 3.20
4596 4976 2.025155 TGCGACTGAACTATCCTCTCC 58.975 52.381 0.00 0.00 0.00 3.71
4598 4978 2.290464 CGACTGAACTATCCTCTCCGT 58.710 52.381 0.00 0.00 0.00 4.69
4599 4979 2.683867 CGACTGAACTATCCTCTCCGTT 59.316 50.000 0.00 0.00 0.00 4.44
4600 4980 3.875727 CGACTGAACTATCCTCTCCGTTA 59.124 47.826 0.00 0.00 0.00 3.18
4601 4981 4.334759 CGACTGAACTATCCTCTCCGTTAA 59.665 45.833 0.00 0.00 0.00 2.01
4602 4982 5.504337 CGACTGAACTATCCTCTCCGTTAAG 60.504 48.000 0.00 0.00 0.00 1.85
4603 4983 5.262804 ACTGAACTATCCTCTCCGTTAAGT 58.737 41.667 0.00 0.00 0.00 2.24
4604 4984 6.421485 ACTGAACTATCCTCTCCGTTAAGTA 58.579 40.000 0.00 0.00 31.07 2.24
4605 4985 7.061688 ACTGAACTATCCTCTCCGTTAAGTAT 58.938 38.462 0.00 0.00 31.07 2.12
4606 4986 7.013464 ACTGAACTATCCTCTCCGTTAAGTATG 59.987 40.741 0.00 0.00 31.07 2.39
4607 4987 5.708877 ACTATCCTCTCCGTTAAGTATGC 57.291 43.478 0.00 0.00 0.00 3.14
4608 4988 5.138276 ACTATCCTCTCCGTTAAGTATGCA 58.862 41.667 0.00 0.00 0.00 3.96
4609 4989 5.775701 ACTATCCTCTCCGTTAAGTATGCAT 59.224 40.000 3.79 3.79 0.00 3.96
4610 4990 4.322080 TCCTCTCCGTTAAGTATGCATG 57.678 45.455 10.16 0.00 0.00 4.06
4611 4991 3.704566 TCCTCTCCGTTAAGTATGCATGT 59.295 43.478 10.16 0.00 0.00 3.21
4612 4992 4.891168 TCCTCTCCGTTAAGTATGCATGTA 59.109 41.667 10.16 0.00 0.00 2.29
4613 4993 4.982916 CCTCTCCGTTAAGTATGCATGTAC 59.017 45.833 10.16 0.00 0.00 2.90
4614 4994 4.603985 TCTCCGTTAAGTATGCATGTACG 58.396 43.478 10.16 10.98 0.00 3.67
4615 4995 4.096833 TCTCCGTTAAGTATGCATGTACGT 59.903 41.667 10.16 1.01 0.00 3.57
4616 4996 4.106909 TCCGTTAAGTATGCATGTACGTG 58.893 43.478 10.16 10.89 0.00 4.49
4617 4997 3.861113 CCGTTAAGTATGCATGTACGTGT 59.139 43.478 16.28 0.33 0.00 4.49
4618 4998 4.259650 CCGTTAAGTATGCATGTACGTGTG 60.260 45.833 16.28 2.88 0.00 3.82
4619 4999 4.574759 GTTAAGTATGCATGTACGTGTGC 58.425 43.478 16.28 12.80 41.61 4.57
4620 5000 1.651987 AGTATGCATGTACGTGTGCC 58.348 50.000 16.28 0.91 40.56 5.01
4621 5001 1.066502 AGTATGCATGTACGTGTGCCA 60.067 47.619 16.28 6.63 40.56 4.92
4622 5002 1.062002 GTATGCATGTACGTGTGCCAC 59.938 52.381 16.28 9.46 40.56 5.01
4623 5003 0.605050 ATGCATGTACGTGTGCCACA 60.605 50.000 16.28 5.94 40.56 4.17
4624 5004 0.605050 TGCATGTACGTGTGCCACAT 60.605 50.000 16.28 7.38 40.56 3.21
4625 5005 0.096976 GCATGTACGTGTGCCACATC 59.903 55.000 16.28 0.00 35.35 3.06
4626 5006 0.726827 CATGTACGTGTGCCACATCC 59.273 55.000 0.00 0.00 33.40 3.51
4627 5007 0.613260 ATGTACGTGTGCCACATCCT 59.387 50.000 0.00 0.00 33.40 3.24
4628 5008 0.037697 TGTACGTGTGCCACATCCTC 60.038 55.000 0.00 0.00 33.40 3.71
4629 5009 1.076533 GTACGTGTGCCACATCCTCG 61.077 60.000 0.00 2.02 33.40 4.63
4630 5010 1.529152 TACGTGTGCCACATCCTCGT 61.529 55.000 14.34 14.34 33.40 4.18
4635 5015 1.234821 GTGCCACATCCTCGTTCAAA 58.765 50.000 0.00 0.00 0.00 2.69
4653 5033 6.582295 CGTTCAAATATTTCTGTTGGACAAGG 59.418 38.462 0.00 0.00 31.32 3.61
4669 5049 3.222603 ACAAGGAGGACAAATGTTGGAC 58.777 45.455 0.00 0.00 34.12 4.02
4670 5050 2.185004 AGGAGGACAAATGTTGGACG 57.815 50.000 0.00 0.00 34.12 4.79
4671 5051 1.420138 AGGAGGACAAATGTTGGACGT 59.580 47.619 0.00 0.00 34.12 4.34
4672 5052 1.535462 GGAGGACAAATGTTGGACGTG 59.465 52.381 0.00 0.00 34.12 4.49
4673 5053 1.535462 GAGGACAAATGTTGGACGTGG 59.465 52.381 0.00 0.00 34.12 4.94
4674 5054 0.039527 GGACAAATGTTGGACGTGGC 60.040 55.000 0.00 0.00 34.12 5.01
4675 5055 0.665835 GACAAATGTTGGACGTGGCA 59.334 50.000 0.00 0.00 34.12 4.92
4676 5056 0.383949 ACAAATGTTGGACGTGGCAC 59.616 50.000 7.79 7.79 34.12 5.01
4677 5057 0.383590 CAAATGTTGGACGTGGCACA 59.616 50.000 19.09 0.00 0.00 4.57
4696 5076 5.450376 CACACCTACGTGCATACTTAAAG 57.550 43.478 0.00 0.00 44.40 1.85
4697 5077 4.328983 CACACCTACGTGCATACTTAAAGG 59.671 45.833 0.00 0.00 44.40 3.11
4698 5078 4.221262 ACACCTACGTGCATACTTAAAGGA 59.779 41.667 0.00 0.00 44.40 3.36
4699 5079 4.804139 CACCTACGTGCATACTTAAAGGAG 59.196 45.833 0.00 0.00 32.04 3.69
4700 5080 3.802685 CCTACGTGCATACTTAAAGGAGC 59.197 47.826 0.00 0.00 0.00 4.70
4701 5081 3.328382 ACGTGCATACTTAAAGGAGCA 57.672 42.857 0.00 0.00 0.00 4.26
4702 5082 3.262420 ACGTGCATACTTAAAGGAGCAG 58.738 45.455 0.00 0.00 32.03 4.24
4703 5083 2.030946 CGTGCATACTTAAAGGAGCAGC 59.969 50.000 0.00 0.00 32.03 5.25
4704 5084 2.356069 GTGCATACTTAAAGGAGCAGCC 59.644 50.000 0.00 0.00 32.03 4.85
4760 5140 2.687370 CCCCTTGCTTTTATGTTGTGC 58.313 47.619 0.00 0.00 0.00 4.57
4764 5144 3.983344 CCTTGCTTTTATGTTGTGCTCAC 59.017 43.478 0.00 0.00 0.00 3.51
4834 5226 1.001020 CATGGCCACCTACCAGCAA 60.001 57.895 8.16 0.00 41.46 3.91
4895 5298 5.540911 ACATCAAGCATTCGGAATGTTTTT 58.459 33.333 24.37 16.50 39.81 1.94
4903 5306 6.589907 AGCATTCGGAATGTTTTTAATGAACC 59.410 34.615 26.54 9.46 41.01 3.62
4906 5309 6.642707 TCGGAATGTTTTTAATGAACCAGT 57.357 33.333 0.00 0.00 0.00 4.00
4911 5314 5.195001 TGTTTTTAATGAACCAGTGAGCC 57.805 39.130 0.00 0.00 0.00 4.70
4912 5315 4.892934 TGTTTTTAATGAACCAGTGAGCCT 59.107 37.500 0.00 0.00 0.00 4.58
4916 5327 7.391148 TTTTAATGAACCAGTGAGCCTTATC 57.609 36.000 0.00 0.00 0.00 1.75
4928 5345 5.819901 AGTGAGCCTTATCTGCAAAATACTC 59.180 40.000 0.00 0.00 0.00 2.59
4930 5347 4.464947 AGCCTTATCTGCAAAATACTCCC 58.535 43.478 0.00 0.00 0.00 4.30
4931 5348 4.166919 AGCCTTATCTGCAAAATACTCCCT 59.833 41.667 0.00 0.00 0.00 4.20
4932 5349 4.517075 GCCTTATCTGCAAAATACTCCCTC 59.483 45.833 0.00 0.00 0.00 4.30
4933 5350 5.688766 GCCTTATCTGCAAAATACTCCCTCT 60.689 44.000 0.00 0.00 0.00 3.69
4934 5351 5.762218 CCTTATCTGCAAAATACTCCCTCTG 59.238 44.000 0.00 0.00 0.00 3.35
4935 5352 4.851639 ATCTGCAAAATACTCCCTCTGT 57.148 40.909 0.00 0.00 0.00 3.41
4938 5355 6.121776 TCTGCAAAATACTCCCTCTGTAAA 57.878 37.500 0.00 0.00 0.00 2.01
4940 5357 6.013725 TCTGCAAAATACTCCCTCTGTAAAGA 60.014 38.462 0.00 0.00 0.00 2.52
4941 5358 6.539173 TGCAAAATACTCCCTCTGTAAAGAA 58.461 36.000 0.00 0.00 0.00 2.52
4943 5360 7.669722 TGCAAAATACTCCCTCTGTAAAGAAAT 59.330 33.333 0.00 0.00 0.00 2.17
4950 5367 8.152023 ACTCCCTCTGTAAAGAAATATTCTGT 57.848 34.615 0.00 0.00 40.59 3.41
4969 5386 6.742559 TCTGTAAAAGTTAACAGAGGGAGT 57.257 37.500 14.09 0.00 45.40 3.85
4970 5387 7.844493 TCTGTAAAAGTTAACAGAGGGAGTA 57.156 36.000 14.09 0.00 45.40 2.59
4971 5388 7.664758 TCTGTAAAAGTTAACAGAGGGAGTAC 58.335 38.462 14.09 0.00 45.40 2.73
4972 5389 7.508296 TCTGTAAAAGTTAACAGAGGGAGTACT 59.492 37.037 14.09 0.00 45.40 2.73
4973 5390 8.710749 TGTAAAAGTTAACAGAGGGAGTACTA 57.289 34.615 8.61 0.00 0.00 1.82
4974 5391 9.146586 TGTAAAAGTTAACAGAGGGAGTACTAA 57.853 33.333 8.61 0.00 0.00 2.24
4975 5392 9.987272 GTAAAAGTTAACAGAGGGAGTACTAAA 57.013 33.333 8.61 0.00 0.00 1.85
4976 5393 8.899427 AAAAGTTAACAGAGGGAGTACTAAAC 57.101 34.615 8.61 0.00 0.00 2.01
4977 5394 6.264841 AGTTAACAGAGGGAGTACTAAACG 57.735 41.667 8.61 0.00 0.00 3.60
5017 5437 6.682746 AGTACAGTACAGAAGATCACACAAG 58.317 40.000 13.37 0.00 0.00 3.16
5105 5539 4.864247 TGTGTGTCGATATTCACATGTGAG 59.136 41.667 26.48 15.83 44.48 3.51
5140 5574 4.323417 AGGTCGCAATTATGTTCTGTTCA 58.677 39.130 0.00 0.00 0.00 3.18
5176 5610 2.925578 TCTCCAAATGCTTGCATTCG 57.074 45.000 19.32 9.93 0.00 3.34
5179 5613 1.885233 TCCAAATGCTTGCATTCGTCA 59.115 42.857 19.32 3.85 0.00 4.35
5202 5636 6.707608 TCAGCCATGTTCATCATCATACTAAC 59.292 38.462 0.00 0.00 34.09 2.34
5215 5649 8.822652 TCATCATACTAACATATGAGTGCTTG 57.177 34.615 10.38 4.20 43.18 4.01
5218 5652 7.275183 TCATACTAACATATGAGTGCTTGCTT 58.725 34.615 10.38 0.00 36.79 3.91
5219 5653 8.421002 TCATACTAACATATGAGTGCTTGCTTA 58.579 33.333 10.38 0.00 36.79 3.09
5220 5654 6.910536 ACTAACATATGAGTGCTTGCTTAC 57.089 37.500 10.38 0.00 0.00 2.34
5221 5655 6.644347 ACTAACATATGAGTGCTTGCTTACT 58.356 36.000 10.38 0.00 0.00 2.24
5222 5656 5.808042 AACATATGAGTGCTTGCTTACTG 57.192 39.130 10.38 0.00 0.00 2.74
5239 5673 9.825109 TTGCTTACTGCTGTATTGTATACATTA 57.175 29.630 6.36 4.89 43.37 1.90
5279 5718 6.590292 CGGAGACACAAATGTTGTAGATAAGT 59.410 38.462 0.00 0.00 43.23 2.24
5295 5734 5.615289 AGATAAGTTACAGCCATGTCCATC 58.385 41.667 0.00 0.00 41.01 3.51
5330 5769 9.598716 AAATCGTGATTTTCTTGCACAGATGCT 62.599 37.037 2.04 0.00 44.03 3.79
5348 5787 4.504132 GCACCTAGCAAGTCCGAG 57.496 61.111 0.00 0.00 44.79 4.63
5445 5884 3.260269 TCTGGTGGAGAAGAAAGAGGA 57.740 47.619 0.00 0.00 0.00 3.71
5499 5938 9.739276 AATGATCTATGTGGTTCTAACTTTCAA 57.261 29.630 0.00 0.00 0.00 2.69
5527 5966 7.489239 AGAAGAGCATTACCTCTCTTTAGTT 57.511 36.000 6.04 0.00 46.32 2.24
5578 6017 6.299805 ACTGACCTCTTATTTGCTGATGTA 57.700 37.500 0.00 0.00 0.00 2.29
5587 6026 9.855361 CTCTTATTTGCTGATGTAATTTCTACG 57.145 33.333 0.00 0.00 0.00 3.51
5755 6194 1.143305 CTGACAACAAGCTCGGTGAG 58.857 55.000 0.00 0.00 0.00 3.51
5905 6368 8.837389 GTTTTCCATGGTAGTATAGAACATTCC 58.163 37.037 12.58 0.00 0.00 3.01
6034 6497 6.536582 CGATGAGTTCAAGAATGAGGTTATGT 59.463 38.462 0.00 0.00 36.78 2.29
6042 6505 7.337938 TCAAGAATGAGGTTATGTTGATAGCA 58.662 34.615 0.00 0.00 0.00 3.49
6087 6550 1.077930 ACTGATCGGCTGCTGCATT 60.078 52.632 17.89 0.84 41.91 3.56
6099 6562 1.610038 TGCTGCATTTGTGGACAAGAG 59.390 47.619 0.00 0.00 37.15 2.85
6150 6613 2.834549 CAAGAGCCTGGACTTCTTCCTA 59.165 50.000 0.00 0.00 46.10 2.94
6165 6634 5.068234 TCTTCCTATTCGGTACACACTTG 57.932 43.478 0.00 0.00 0.00 3.16
6174 6643 2.555325 CGGTACACACTTGACCTCTGTA 59.445 50.000 0.00 0.00 0.00 2.74
6189 6658 4.202461 ACCTCTGTAAGCATCAAAGTTCCA 60.202 41.667 0.00 0.00 0.00 3.53
6227 6698 9.612620 GAACAGATACTGATTTACCTGTTTTTG 57.387 33.333 0.00 0.00 42.64 2.44
6257 6728 3.442977 ACAAATCCAAGAGCATGCTTCTC 59.557 43.478 23.61 9.68 0.00 2.87
6269 6740 0.106708 TGCTTCTCGACTGGCAAACT 59.893 50.000 0.00 0.00 0.00 2.66
6368 6839 3.406764 AGACCTCAAGACAAGCAACATC 58.593 45.455 0.00 0.00 0.00 3.06
6395 6866 4.376223 TGGATAAGGACATGACCCCTAAA 58.624 43.478 10.77 1.81 31.36 1.85
6470 6941 2.338620 CTTCGAGTGGTCGGCACA 59.661 61.111 0.00 0.00 46.80 4.57
6482 6953 2.601763 GGTCGGCACATAGTAAGTTTCG 59.398 50.000 0.00 0.00 0.00 3.46
6485 6956 2.601763 CGGCACATAGTAAGTTTCGACC 59.398 50.000 0.00 0.00 0.00 4.79
6505 6976 3.256631 ACCAGCAATTCAATCACCTTGTC 59.743 43.478 0.00 0.00 36.20 3.18
6531 7002 8.712363 CATATCGACAATGTTAACCTCCTAATG 58.288 37.037 2.48 0.00 0.00 1.90
6550 7021 5.393068 AATGTGGATGATCCTTACATGGT 57.607 39.130 15.63 1.90 34.55 3.55
6551 7022 4.422073 TGTGGATGATCCTTACATGGTC 57.578 45.455 13.44 0.00 37.46 4.02
6561 7032 0.035820 TTACATGGTCGGTTCCCTGC 60.036 55.000 0.00 0.00 0.00 4.85
6570 7041 2.674380 GTTCCCTGCTGCAGTGGG 60.674 66.667 29.47 29.47 42.20 4.61
6582 7053 1.224592 CAGTGGGTACATGGCTCCC 59.775 63.158 13.05 13.05 41.41 4.30
6648 7119 2.506217 TTCGGCGTCATCGTGCTC 60.506 61.111 6.85 0.00 39.49 4.26
6770 7241 2.030805 GCTTTGTCAATGTCTCACCACC 60.031 50.000 0.92 0.00 0.00 4.61
7186 7658 4.979197 TCATTGTTTTGGTGATTTGCGTAC 59.021 37.500 0.00 0.00 0.00 3.67
7187 7659 2.988343 TGTTTTGGTGATTTGCGTACG 58.012 42.857 11.84 11.84 0.00 3.67
7188 7660 2.355132 TGTTTTGGTGATTTGCGTACGT 59.645 40.909 17.90 0.00 0.00 3.57
7189 7661 3.558829 TGTTTTGGTGATTTGCGTACGTA 59.441 39.130 17.90 10.06 0.00 3.57
7281 7754 3.520691 ATCAATGGATGGGTGATGAGG 57.479 47.619 0.00 0.00 30.84 3.86
7343 7818 3.402681 CCATGGGAGGGTCGCAGT 61.403 66.667 2.85 0.00 42.66 4.40
7439 7921 4.561735 TTTCTTTTGCGACGGAAATTCT 57.438 36.364 15.43 0.00 0.00 2.40
7570 8054 7.560991 AGGGCATAACATAAAAAGATGTGATGA 59.439 33.333 15.23 0.00 45.94 2.92
7688 8179 5.479724 TGTTGGCTTATTGAATTGATGTGGA 59.520 36.000 0.00 0.00 0.00 4.02
7695 8186 2.698803 TGAATTGATGTGGACTGACCG 58.301 47.619 0.00 0.00 42.61 4.79
7750 8241 4.991056 CCGGACAGACATCGATTTGATAAT 59.009 41.667 0.00 0.00 34.83 1.28
7751 8242 5.107337 CCGGACAGACATCGATTTGATAATG 60.107 44.000 0.00 0.00 34.83 1.90
7752 8243 5.107337 CGGACAGACATCGATTTGATAATGG 60.107 44.000 0.00 0.00 34.83 3.16
7754 8245 5.928976 ACAGACATCGATTTGATAATGGGA 58.071 37.500 0.00 0.00 34.83 4.37
7755 8246 6.356556 ACAGACATCGATTTGATAATGGGAA 58.643 36.000 0.00 0.00 34.83 3.97
7756 8247 6.828273 ACAGACATCGATTTGATAATGGGAAA 59.172 34.615 0.00 0.00 34.83 3.13
7758 8249 6.488006 AGACATCGATTTGATAATGGGAAAGG 59.512 38.462 0.00 0.00 34.83 3.11
7759 8250 6.129179 ACATCGATTTGATAATGGGAAAGGT 58.871 36.000 0.00 0.00 34.83 3.50
7760 8251 6.607198 ACATCGATTTGATAATGGGAAAGGTT 59.393 34.615 0.00 0.00 34.83 3.50
7762 8253 6.862209 TCGATTTGATAATGGGAAAGGTTTG 58.138 36.000 0.00 0.00 0.00 2.93
7763 8254 6.435904 TCGATTTGATAATGGGAAAGGTTTGT 59.564 34.615 0.00 0.00 0.00 2.83
7764 8255 7.612244 TCGATTTGATAATGGGAAAGGTTTGTA 59.388 33.333 0.00 0.00 0.00 2.41
7765 8256 8.413229 CGATTTGATAATGGGAAAGGTTTGTAT 58.587 33.333 0.00 0.00 0.00 2.29
7769 8260 6.768861 TGATAATGGGAAAGGTTTGTATACGG 59.231 38.462 0.00 0.00 0.00 4.02
7770 8261 2.713877 TGGGAAAGGTTTGTATACGGC 58.286 47.619 0.00 0.00 0.00 5.68
7774 8265 2.014335 AAGGTTTGTATACGGCGGAC 57.986 50.000 13.24 6.89 0.00 4.79
7775 8266 0.176449 AGGTTTGTATACGGCGGACC 59.824 55.000 13.24 7.32 0.00 4.46
7800 8291 3.767230 CGTTCAGCTGGTCGCGTG 61.767 66.667 15.13 0.00 45.59 5.34
7823 9351 0.386100 CGCGTCGGATCACCTGATAG 60.386 60.000 0.00 0.00 34.37 2.08
7824 9352 0.664767 GCGTCGGATCACCTGATAGC 60.665 60.000 0.00 0.00 34.37 2.97
7827 9355 1.730902 CGGATCACCTGATAGCGCG 60.731 63.158 0.00 0.00 34.37 6.86
7829 9357 0.941463 GGATCACCTGATAGCGCGTG 60.941 60.000 8.43 2.70 34.37 5.34
7831 9359 0.249073 ATCACCTGATAGCGCGTGTC 60.249 55.000 8.43 4.18 32.01 3.67
7833 9361 0.867753 CACCTGATAGCGCGTGTCTC 60.868 60.000 8.43 0.28 0.00 3.36
7895 9520 9.077885 ACAATCACAAGTACATTAATTTGGACT 57.922 29.630 0.00 0.00 42.77 3.85
7966 9591 9.971922 CAATGAAATCTCTTTAAAACACCTTCT 57.028 29.630 0.00 0.00 0.00 2.85
8012 9637 9.817809 TGAATTACTTACCACAGTATCAATCTC 57.182 33.333 0.00 0.00 0.00 2.75
8041 9666 6.077838 CGAAGAAATACTCCAAAAACTTCGG 58.922 40.000 2.06 0.00 45.96 4.30
8045 9670 8.454570 AGAAATACTCCAAAAACTTCGGTAAA 57.545 30.769 0.00 0.00 0.00 2.01
8046 9671 8.565416 AGAAATACTCCAAAAACTTCGGTAAAG 58.435 33.333 0.00 0.00 41.08 1.85
8047 9672 8.454570 AAATACTCCAAAAACTTCGGTAAAGA 57.545 30.769 0.00 0.00 38.44 2.52
8049 9674 4.820173 ACTCCAAAAACTTCGGTAAAGAGG 59.180 41.667 0.00 0.00 38.44 3.69
8050 9675 4.784177 TCCAAAAACTTCGGTAAAGAGGT 58.216 39.130 0.00 0.00 38.44 3.85
8055 9680 2.490991 ACTTCGGTAAAGAGGTTGCAC 58.509 47.619 0.00 0.00 38.44 4.57
8072 9697 0.249868 CACTTGGACTGGAGCAACGA 60.250 55.000 0.00 0.00 0.00 3.85
8091 9716 2.480419 CGATGTTGTCACTCTTTCACCC 59.520 50.000 0.00 0.00 0.00 4.61
8095 9720 0.396435 TGTCACTCTTTCACCCGCAT 59.604 50.000 0.00 0.00 0.00 4.73
8101 9726 1.466167 CTCTTTCACCCGCATGAACAG 59.534 52.381 0.00 2.46 38.31 3.16
8112 9737 5.163663 ACCCGCATGAACAGTACAAATAATG 60.164 40.000 0.00 0.00 32.53 1.90
8113 9738 5.065859 CCCGCATGAACAGTACAAATAATGA 59.934 40.000 0.00 0.00 30.78 2.57
8133 9758 3.068024 TGATTTTTGAAAGCGCCTTGAGT 59.932 39.130 2.29 0.00 0.00 3.41
8211 9836 4.237724 GTGTGATGCTTAAAGGCCTTTTC 58.762 43.478 34.60 24.64 34.23 2.29
8215 9840 2.858745 TGCTTAAAGGCCTTTTCTCGT 58.141 42.857 34.60 13.26 34.23 4.18
8226 9851 2.223377 CCTTTTCTCGTGTGGTGCTTAC 59.777 50.000 0.00 0.00 0.00 2.34
8227 9852 2.605837 TTTCTCGTGTGGTGCTTACA 57.394 45.000 0.00 0.00 0.00 2.41
8232 9857 1.841663 CGTGTGGTGCTTACACTGGC 61.842 60.000 13.84 0.00 46.57 4.85
8286 9912 3.949586 TTTATGTGGAGGATGGCATGA 57.050 42.857 3.81 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.951558 AGTAGCTTTTGTGGTTGCCG 59.048 50.000 0.00 0.00 0.00 5.69
1 2 2.228103 GGTAGTAGCTTTTGTGGTTGCC 59.772 50.000 0.00 0.00 0.00 4.52
2 3 2.095919 CGGTAGTAGCTTTTGTGGTTGC 60.096 50.000 0.00 0.00 0.00 4.17
3 4 3.185797 GTCGGTAGTAGCTTTTGTGGTTG 59.814 47.826 0.00 0.00 0.00 3.77
4 5 3.396560 GTCGGTAGTAGCTTTTGTGGTT 58.603 45.455 0.00 0.00 0.00 3.67
5 6 2.608752 CGTCGGTAGTAGCTTTTGTGGT 60.609 50.000 0.00 0.00 0.00 4.16
6 7 1.990563 CGTCGGTAGTAGCTTTTGTGG 59.009 52.381 0.00 0.00 0.00 4.17
7 8 2.915463 CTCGTCGGTAGTAGCTTTTGTG 59.085 50.000 0.00 0.00 0.00 3.33
8 9 2.555757 ACTCGTCGGTAGTAGCTTTTGT 59.444 45.455 0.00 0.00 0.00 2.83
9 10 3.213249 ACTCGTCGGTAGTAGCTTTTG 57.787 47.619 0.00 0.00 0.00 2.44
10 11 3.930634 AACTCGTCGGTAGTAGCTTTT 57.069 42.857 0.00 0.00 0.00 2.27
11 12 3.930634 AAACTCGTCGGTAGTAGCTTT 57.069 42.857 0.00 0.00 0.00 3.51
12 13 3.930634 AAAACTCGTCGGTAGTAGCTT 57.069 42.857 0.00 0.00 0.00 3.74
13 14 3.930634 AAAAACTCGTCGGTAGTAGCT 57.069 42.857 0.00 0.00 0.00 3.32
31 32 2.108344 GACGCCGTCGAAGCCAAAAA 62.108 55.000 0.00 0.00 39.41 1.94
32 33 2.589442 ACGCCGTCGAAGCCAAAA 60.589 55.556 0.00 0.00 39.41 2.44
33 34 3.039588 GACGCCGTCGAAGCCAAA 61.040 61.111 0.00 0.00 39.41 3.28
34 35 4.287781 TGACGCCGTCGAAGCCAA 62.288 61.111 13.18 0.00 39.41 4.52
35 36 4.717629 CTGACGCCGTCGAAGCCA 62.718 66.667 13.18 0.00 39.41 4.75
37 38 4.415332 TCCTGACGCCGTCGAAGC 62.415 66.667 13.18 0.00 39.41 3.86
38 39 2.504244 GTCCTGACGCCGTCGAAG 60.504 66.667 13.18 5.17 39.41 3.79
53 54 2.484889 GTAGCAATTCAGGATCCCGTC 58.515 52.381 8.55 0.00 0.00 4.79
54 55 1.202533 CGTAGCAATTCAGGATCCCGT 60.203 52.381 8.55 0.00 0.00 5.28
55 56 1.068588 TCGTAGCAATTCAGGATCCCG 59.931 52.381 8.55 0.00 0.00 5.14
56 57 2.484889 GTCGTAGCAATTCAGGATCCC 58.515 52.381 8.55 0.00 0.00 3.85
57 58 2.484889 GGTCGTAGCAATTCAGGATCC 58.515 52.381 2.48 2.48 0.00 3.36
58 59 2.128035 CGGTCGTAGCAATTCAGGATC 58.872 52.381 0.00 0.00 0.00 3.36
59 60 1.754803 TCGGTCGTAGCAATTCAGGAT 59.245 47.619 0.00 0.00 0.00 3.24
60 61 1.135199 GTCGGTCGTAGCAATTCAGGA 60.135 52.381 0.00 0.00 0.00 3.86
61 62 1.278238 GTCGGTCGTAGCAATTCAGG 58.722 55.000 0.00 0.00 0.00 3.86
62 63 1.990799 TGTCGGTCGTAGCAATTCAG 58.009 50.000 0.00 0.00 0.00 3.02
63 64 2.063266 GTTGTCGGTCGTAGCAATTCA 58.937 47.619 0.00 0.00 0.00 2.57
64 65 1.392510 GGTTGTCGGTCGTAGCAATTC 59.607 52.381 0.00 0.00 0.00 2.17
65 66 1.435577 GGTTGTCGGTCGTAGCAATT 58.564 50.000 0.00 0.00 0.00 2.32
66 67 0.734942 CGGTTGTCGGTCGTAGCAAT 60.735 55.000 0.00 0.00 34.75 3.56
67 68 1.372004 CGGTTGTCGGTCGTAGCAA 60.372 57.895 0.00 0.00 34.75 3.91
68 69 2.256158 CGGTTGTCGGTCGTAGCA 59.744 61.111 0.00 0.00 34.75 3.49
69 70 3.177249 GCGGTTGTCGGTCGTAGC 61.177 66.667 0.00 0.00 39.69 3.58
70 71 0.940519 TTTGCGGTTGTCGGTCGTAG 60.941 55.000 0.00 0.00 39.69 3.51
71 72 0.529337 TTTTGCGGTTGTCGGTCGTA 60.529 50.000 0.00 0.00 39.69 3.43
72 73 1.768112 CTTTTGCGGTTGTCGGTCGT 61.768 55.000 0.00 0.00 39.69 4.34
73 74 1.083015 CTTTTGCGGTTGTCGGTCG 60.083 57.895 0.00 0.00 39.69 4.79
74 75 1.370051 GCTTTTGCGGTTGTCGGTC 60.370 57.895 0.00 0.00 39.69 4.79
75 76 2.719354 GCTTTTGCGGTTGTCGGT 59.281 55.556 0.00 0.00 39.69 4.69
86 87 2.277084 ACTCGCCGGTAATAGCTTTTG 58.723 47.619 1.90 0.00 0.00 2.44
87 88 2.685850 ACTCGCCGGTAATAGCTTTT 57.314 45.000 1.90 0.00 0.00 2.27
88 89 2.685850 AACTCGCCGGTAATAGCTTT 57.314 45.000 1.90 0.00 0.00 3.51
89 90 2.167900 AGAAACTCGCCGGTAATAGCTT 59.832 45.455 1.90 0.00 0.00 3.74
90 91 1.755380 AGAAACTCGCCGGTAATAGCT 59.245 47.619 1.90 0.00 0.00 3.32
91 92 2.220479 AGAAACTCGCCGGTAATAGC 57.780 50.000 1.90 0.00 0.00 2.97
92 93 4.726876 GCAAAAGAAACTCGCCGGTAATAG 60.727 45.833 1.90 0.00 0.00 1.73
93 94 3.125658 GCAAAAGAAACTCGCCGGTAATA 59.874 43.478 1.90 0.00 0.00 0.98
94 95 2.095415 GCAAAAGAAACTCGCCGGTAAT 60.095 45.455 1.90 0.00 0.00 1.89
95 96 1.264826 GCAAAAGAAACTCGCCGGTAA 59.735 47.619 1.90 0.00 0.00 2.85
96 97 0.869730 GCAAAAGAAACTCGCCGGTA 59.130 50.000 1.90 0.00 0.00 4.02
97 98 0.818040 AGCAAAAGAAACTCGCCGGT 60.818 50.000 1.90 0.00 0.00 5.28
98 99 0.310854 AAGCAAAAGAAACTCGCCGG 59.689 50.000 0.00 0.00 0.00 6.13
99 100 1.674908 GAAGCAAAAGAAACTCGCCG 58.325 50.000 0.00 0.00 0.00 6.46
100 101 1.263217 TCGAAGCAAAAGAAACTCGCC 59.737 47.619 0.00 0.00 0.00 5.54
101 102 2.663279 TCGAAGCAAAAGAAACTCGC 57.337 45.000 0.00 0.00 0.00 5.03
102 103 3.058914 ACCATCGAAGCAAAAGAAACTCG 60.059 43.478 0.00 0.00 0.00 4.18
103 104 4.024048 TCACCATCGAAGCAAAAGAAACTC 60.024 41.667 0.00 0.00 0.00 3.01
104 105 3.882888 TCACCATCGAAGCAAAAGAAACT 59.117 39.130 0.00 0.00 0.00 2.66
105 106 3.975035 GTCACCATCGAAGCAAAAGAAAC 59.025 43.478 0.00 0.00 0.00 2.78
106 107 3.303725 CGTCACCATCGAAGCAAAAGAAA 60.304 43.478 0.00 0.00 0.00 2.52
107 108 2.223144 CGTCACCATCGAAGCAAAAGAA 59.777 45.455 0.00 0.00 0.00 2.52
108 109 1.798223 CGTCACCATCGAAGCAAAAGA 59.202 47.619 0.00 0.00 0.00 2.52
109 110 1.135972 CCGTCACCATCGAAGCAAAAG 60.136 52.381 0.00 0.00 0.00 2.27
110 111 0.871722 CCGTCACCATCGAAGCAAAA 59.128 50.000 0.00 0.00 0.00 2.44
111 112 0.953471 CCCGTCACCATCGAAGCAAA 60.953 55.000 0.00 0.00 0.00 3.68
112 113 1.375396 CCCGTCACCATCGAAGCAA 60.375 57.895 0.00 0.00 0.00 3.91
113 114 2.264480 CCCGTCACCATCGAAGCA 59.736 61.111 0.00 0.00 0.00 3.91
114 115 2.511600 CCCCGTCACCATCGAAGC 60.512 66.667 0.00 0.00 0.00 3.86
115 116 2.186903 CCCCCGTCACCATCGAAG 59.813 66.667 0.00 0.00 0.00 3.79
129 130 2.364780 CCTGGTCGGTACTTCCCCC 61.365 68.421 0.00 0.00 0.00 5.40
130 131 1.305549 TCCTGGTCGGTACTTCCCC 60.306 63.158 0.00 0.00 0.00 4.81
131 132 0.324091 TCTCCTGGTCGGTACTTCCC 60.324 60.000 0.00 0.00 0.00 3.97
132 133 1.477295 CTTCTCCTGGTCGGTACTTCC 59.523 57.143 0.00 0.00 0.00 3.46
133 134 1.477295 CCTTCTCCTGGTCGGTACTTC 59.523 57.143 0.00 0.00 0.00 3.01
134 135 1.076677 TCCTTCTCCTGGTCGGTACTT 59.923 52.381 0.00 0.00 0.00 2.24
135 136 0.702902 TCCTTCTCCTGGTCGGTACT 59.297 55.000 0.00 0.00 0.00 2.73
136 137 1.104630 CTCCTTCTCCTGGTCGGTAC 58.895 60.000 0.00 0.00 0.00 3.34
137 138 0.033405 CCTCCTTCTCCTGGTCGGTA 60.033 60.000 0.00 0.00 0.00 4.02
138 139 1.305381 CCTCCTTCTCCTGGTCGGT 60.305 63.158 0.00 0.00 0.00 4.69
139 140 2.726351 GCCTCCTTCTCCTGGTCGG 61.726 68.421 0.00 0.00 0.00 4.79
140 141 2.896443 GCCTCCTTCTCCTGGTCG 59.104 66.667 0.00 0.00 0.00 4.79
141 142 2.726351 CCGCCTCCTTCTCCTGGTC 61.726 68.421 0.00 0.00 0.00 4.02
142 143 2.685380 CCGCCTCCTTCTCCTGGT 60.685 66.667 0.00 0.00 0.00 4.00
143 144 2.685380 ACCGCCTCCTTCTCCTGG 60.685 66.667 0.00 0.00 0.00 4.45
144 145 2.286523 ACACCGCCTCCTTCTCCTG 61.287 63.158 0.00 0.00 0.00 3.86
145 146 2.120718 ACACCGCCTCCTTCTCCT 59.879 61.111 0.00 0.00 0.00 3.69
146 147 2.232298 CTCACACCGCCTCCTTCTCC 62.232 65.000 0.00 0.00 0.00 3.71
147 148 1.216710 CTCACACCGCCTCCTTCTC 59.783 63.158 0.00 0.00 0.00 2.87
148 149 3.382111 CTCACACCGCCTCCTTCT 58.618 61.111 0.00 0.00 0.00 2.85
483 484 2.202171 CATGCCGAACGTCGTTGC 60.202 61.111 16.75 14.06 38.40 4.17
484 485 1.129809 GTCATGCCGAACGTCGTTG 59.870 57.895 16.75 7.87 38.40 4.10
485 486 2.025418 GGTCATGCCGAACGTCGTT 61.025 57.895 11.08 11.08 38.40 3.85
486 487 2.431942 GGTCATGCCGAACGTCGT 60.432 61.111 0.00 0.00 38.40 4.34
487 488 2.126071 AGGTCATGCCGAACGTCG 60.126 61.111 0.00 0.00 43.70 5.12
488 489 0.108992 TACAGGTCATGCCGAACGTC 60.109 55.000 0.00 0.00 43.70 4.34
489 490 0.319083 TTACAGGTCATGCCGAACGT 59.681 50.000 0.00 0.00 43.70 3.99
490 491 1.127951 GTTTACAGGTCATGCCGAACG 59.872 52.381 0.00 0.00 43.70 3.95
491 492 1.127951 CGTTTACAGGTCATGCCGAAC 59.872 52.381 0.00 0.00 43.70 3.95
492 493 1.001068 TCGTTTACAGGTCATGCCGAA 59.999 47.619 0.00 0.00 43.70 4.30
493 494 0.604073 TCGTTTACAGGTCATGCCGA 59.396 50.000 0.00 0.00 43.70 5.54
494 495 0.999406 CTCGTTTACAGGTCATGCCG 59.001 55.000 0.00 0.00 43.70 5.69
495 496 1.369625 CCTCGTTTACAGGTCATGCC 58.630 55.000 0.00 0.00 37.58 4.40
496 497 0.727398 GCCTCGTTTACAGGTCATGC 59.273 55.000 0.00 0.00 32.98 4.06
497 498 2.093306 TGCCTCGTTTACAGGTCATG 57.907 50.000 0.00 0.00 32.98 3.07
498 499 2.423577 GTTGCCTCGTTTACAGGTCAT 58.576 47.619 0.00 0.00 32.98 3.06
499 500 1.870580 CGTTGCCTCGTTTACAGGTCA 60.871 52.381 0.00 0.00 32.98 4.02
500 501 0.788391 CGTTGCCTCGTTTACAGGTC 59.212 55.000 0.00 0.00 32.98 3.85
501 502 0.601841 CCGTTGCCTCGTTTACAGGT 60.602 55.000 0.00 0.00 32.98 4.00
502 503 1.296056 CCCGTTGCCTCGTTTACAGG 61.296 60.000 0.00 0.00 0.00 4.00
503 504 1.296056 CCCCGTTGCCTCGTTTACAG 61.296 60.000 0.00 0.00 0.00 2.74
504 505 1.301874 CCCCGTTGCCTCGTTTACA 60.302 57.895 0.00 0.00 0.00 2.41
505 506 2.036571 CCCCCGTTGCCTCGTTTAC 61.037 63.158 0.00 0.00 0.00 2.01
506 507 1.766625 TTCCCCCGTTGCCTCGTTTA 61.767 55.000 0.00 0.00 0.00 2.01
507 508 3.122727 TTCCCCCGTTGCCTCGTTT 62.123 57.895 0.00 0.00 0.00 3.60
508 509 3.546714 CTTCCCCCGTTGCCTCGTT 62.547 63.158 0.00 0.00 0.00 3.85
509 510 4.016706 CTTCCCCCGTTGCCTCGT 62.017 66.667 0.00 0.00 0.00 4.18
510 511 4.778143 CCTTCCCCCGTTGCCTCG 62.778 72.222 0.00 0.00 0.00 4.63
520 521 1.306148 GTAATAAGCACGCCTTCCCC 58.694 55.000 0.00 0.00 34.95 4.81
523 524 1.940613 CCCTGTAATAAGCACGCCTTC 59.059 52.381 0.00 0.00 34.95 3.46
534 535 1.691976 CCTGACGCATCCCCTGTAATA 59.308 52.381 0.00 0.00 0.00 0.98
535 536 0.469917 CCTGACGCATCCCCTGTAAT 59.530 55.000 0.00 0.00 0.00 1.89
536 537 1.622607 CCCTGACGCATCCCCTGTAA 61.623 60.000 0.00 0.00 0.00 2.41
540 541 3.402681 CACCCTGACGCATCCCCT 61.403 66.667 0.00 0.00 0.00 4.79
558 559 2.022240 GCTCTTCACCGCCTAGGAGG 62.022 65.000 28.41 28.41 45.00 4.30
562 563 2.105128 CCGCTCTTCACCGCCTAG 59.895 66.667 0.00 0.00 0.00 3.02
594 595 0.392998 ATCGCTAGTTGTGGGCCTTG 60.393 55.000 4.53 0.00 0.00 3.61
595 596 0.392998 CATCGCTAGTTGTGGGCCTT 60.393 55.000 4.53 0.00 0.00 4.35
597 598 0.811616 CTCATCGCTAGTTGTGGGCC 60.812 60.000 0.00 0.00 0.00 5.80
598 599 0.175760 TCTCATCGCTAGTTGTGGGC 59.824 55.000 0.00 0.00 0.00 5.36
599 600 1.471676 GGTCTCATCGCTAGTTGTGGG 60.472 57.143 0.00 0.00 0.00 4.61
621 622 0.550147 ATGACCCTACCCCTTGCAGT 60.550 55.000 0.00 0.00 0.00 4.40
626 627 0.331616 GCACAATGACCCTACCCCTT 59.668 55.000 0.00 0.00 0.00 3.95
656 658 2.890371 GTACACCCCGCATCGAGT 59.110 61.111 0.00 0.00 0.00 4.18
658 660 3.063704 ACGTACACCCCGCATCGA 61.064 61.111 0.00 0.00 0.00 3.59
661 663 4.770874 GCCACGTACACCCCGCAT 62.771 66.667 0.00 0.00 0.00 4.73
667 669 2.195922 CCGTAAATAGCCACGTACACC 58.804 52.381 0.00 0.00 36.44 4.16
668 670 2.159254 TCCCGTAAATAGCCACGTACAC 60.159 50.000 0.00 0.00 36.44 2.90
707 721 3.739080 ATCCCCCGGGCCATCTTCT 62.739 63.158 17.73 0.00 34.68 2.85
713 727 2.153401 CATTAGATCCCCCGGGCCA 61.153 63.158 17.73 2.76 34.68 5.36
720 740 1.992557 TGGCCATACCATTAGATCCCC 59.007 52.381 0.00 0.00 46.36 4.81
731 751 4.623932 TCTATGTCTCATTGGCCATACC 57.376 45.455 6.09 0.00 39.84 2.73
732 754 5.798132 TGATCTATGTCTCATTGGCCATAC 58.202 41.667 6.09 0.67 0.00 2.39
743 765 4.262808 CCCCAACCATCTGATCTATGTCTC 60.263 50.000 0.00 0.00 0.00 3.36
755 783 3.411517 CCGCCTCCCCAACCATCT 61.412 66.667 0.00 0.00 0.00 2.90
771 799 1.445410 GCCAAAATTTCGACCGGCC 60.445 57.895 0.00 0.00 33.31 6.13
808 836 3.359695 AGTTATTTTAAGGCCAGCGGA 57.640 42.857 5.01 0.00 0.00 5.54
809 837 4.497507 GCTAAGTTATTTTAAGGCCAGCGG 60.498 45.833 5.01 0.00 0.00 5.52
855 883 2.485814 GGCAAGTGCTTCTTCGATTCTT 59.514 45.455 2.85 0.00 41.70 2.52
1019 1053 2.667418 GCAGCAGCTGGAAGAGGA 59.333 61.111 24.13 0.00 37.91 3.71
1386 1426 1.741770 GTTCCCGCTGTCGAGCAAT 60.742 57.895 0.00 0.00 46.62 3.56
1392 1432 3.966026 GACGAGGTTCCCGCTGTCG 62.966 68.421 0.00 0.00 36.71 4.35
2070 2110 4.947147 GTGTCCGGCACCTTGGCA 62.947 66.667 15.54 0.00 43.94 4.92
2420 2476 4.035112 ACCAAAGGATAGGACGGAACATA 58.965 43.478 0.00 0.00 0.00 2.29
2444 2501 7.425224 AGCTGGCTCTAAATCTTCTAAGTTA 57.575 36.000 0.00 0.00 0.00 2.24
2464 2521 1.030488 CAGATGCCAACCCAGAGCTG 61.030 60.000 0.00 0.00 0.00 4.24
2465 2522 1.203441 TCAGATGCCAACCCAGAGCT 61.203 55.000 0.00 0.00 0.00 4.09
2466 2523 0.322816 TTCAGATGCCAACCCAGAGC 60.323 55.000 0.00 0.00 0.00 4.09
2467 2524 1.457346 GTTCAGATGCCAACCCAGAG 58.543 55.000 0.00 0.00 0.00 3.35
2469 2526 0.038744 AGGTTCAGATGCCAACCCAG 59.961 55.000 0.00 0.00 42.85 4.45
2474 2541 4.751767 AACAAAAAGGTTCAGATGCCAA 57.248 36.364 0.00 0.00 0.00 4.52
2512 2579 4.881019 TGCCAAAAGCTAAATGCCTAAA 57.119 36.364 0.00 0.00 44.23 1.85
2591 2658 2.826128 ACCGTGCAAGATCTAGTTCTGA 59.174 45.455 0.00 0.00 0.00 3.27
2610 2683 2.779506 CCCCTCACTGACTAAACAACC 58.220 52.381 0.00 0.00 0.00 3.77
2641 2714 3.098636 GCTTTCACTCGAAACACAACAC 58.901 45.455 0.00 0.00 36.19 3.32
2646 2719 2.384899 GTGGCTTTCACTCGAAACAC 57.615 50.000 0.00 0.00 42.86 3.32
2675 2748 5.605564 GCCCAAAGCAAAATAATTCGTTT 57.394 34.783 0.00 0.00 42.97 3.60
2699 2790 6.754209 ACTATGCTCGAGAATAAGTTTGACTG 59.246 38.462 18.75 2.83 0.00 3.51
2700 2791 6.868622 ACTATGCTCGAGAATAAGTTTGACT 58.131 36.000 18.75 0.00 0.00 3.41
2760 2851 6.000219 ACCGAGTAGTACTCAGTCAAACTTA 59.000 40.000 26.06 0.00 45.30 2.24
2763 2854 4.762956 ACCGAGTAGTACTCAGTCAAAC 57.237 45.455 26.06 1.79 45.30 2.93
2765 2856 5.798132 TCTAACCGAGTAGTACTCAGTCAA 58.202 41.667 26.06 13.74 45.30 3.18
2766 2857 5.411831 TCTAACCGAGTAGTACTCAGTCA 57.588 43.478 26.06 9.79 45.30 3.41
2767 2858 6.047870 TCATCTAACCGAGTAGTACTCAGTC 58.952 44.000 26.06 4.41 45.30 3.51
2768 2859 5.987098 TCATCTAACCGAGTAGTACTCAGT 58.013 41.667 26.06 19.65 45.30 3.41
2769 2860 6.282167 TCTCATCTAACCGAGTAGTACTCAG 58.718 44.000 26.06 19.04 45.30 3.35
2771 2862 5.697633 CCTCTCATCTAACCGAGTAGTACTC 59.302 48.000 18.77 18.77 41.71 2.59
2772 2863 5.130809 ACCTCTCATCTAACCGAGTAGTACT 59.869 44.000 1.37 1.37 0.00 2.73
2773 2864 5.367302 ACCTCTCATCTAACCGAGTAGTAC 58.633 45.833 0.00 0.00 0.00 2.73
2774 2865 5.627182 ACCTCTCATCTAACCGAGTAGTA 57.373 43.478 0.00 0.00 0.00 1.82
2775 2866 4.506937 ACCTCTCATCTAACCGAGTAGT 57.493 45.455 0.00 0.00 0.00 2.73
2776 2867 4.641094 ACAACCTCTCATCTAACCGAGTAG 59.359 45.833 0.00 0.00 0.00 2.57
2777 2868 4.398358 CACAACCTCTCATCTAACCGAGTA 59.602 45.833 0.00 0.00 0.00 2.59
2822 2921 3.380142 ACTAATGGTTGCTTTGTTTGCG 58.620 40.909 0.00 0.00 0.00 4.85
2873 2980 1.996191 CTCGAGCAGAGCAAGGTTTAC 59.004 52.381 0.00 0.00 40.54 2.01
2913 3024 3.553511 CGCACTTTCTCATCTGTATGGAC 59.446 47.826 0.00 0.00 33.61 4.02
2914 3025 3.430790 CCGCACTTTCTCATCTGTATGGA 60.431 47.826 0.00 0.00 33.61 3.41
2925 3036 3.914364 CAGCAAATTAACCGCACTTTCTC 59.086 43.478 0.00 0.00 0.00 2.87
2931 3042 2.031157 AGTGACAGCAAATTAACCGCAC 60.031 45.455 0.00 0.00 0.00 5.34
2933 3044 2.979813 CAAGTGACAGCAAATTAACCGC 59.020 45.455 0.00 0.00 0.00 5.68
2934 3045 4.223320 ACAAGTGACAGCAAATTAACCG 57.777 40.909 0.00 0.00 0.00 4.44
2945 3099 7.119262 CCCTAAATAAAGGTGTACAAGTGACAG 59.881 40.741 0.00 0.00 34.56 3.51
2954 3108 5.963214 TCCTCCCCTAAATAAAGGTGTAC 57.037 43.478 0.00 0.00 34.56 2.90
2959 3113 6.490492 TCAACTTTCCTCCCCTAAATAAAGG 58.510 40.000 0.00 0.00 36.30 3.11
3035 3233 4.210331 GGCATATCACCATCAACTTTCCT 58.790 43.478 0.00 0.00 0.00 3.36
3048 3246 8.352942 CCAATAAAAAGTTCTAGGGCATATCAC 58.647 37.037 0.00 0.00 0.00 3.06
3165 3376 0.863119 GATCGCGCAGAACAAATGCC 60.863 55.000 8.75 0.00 40.67 4.40
3243 3462 9.715121 TCGTTTTTCTAATAAGTGGTGATTACT 57.285 29.630 0.00 0.00 0.00 2.24
3267 3486 2.278857 CTGGCGTCCGATCCTTCG 60.279 66.667 0.00 0.00 45.08 3.79
3271 3490 1.064060 CATTTTTCTGGCGTCCGATCC 59.936 52.381 0.00 0.00 0.00 3.36
3272 3491 2.006888 TCATTTTTCTGGCGTCCGATC 58.993 47.619 0.00 0.00 0.00 3.69
3284 3503 7.708322 GCCCTTTCTATTCCAGAATCATTTTTC 59.292 37.037 0.00 0.00 42.88 2.29
3337 3556 1.007734 CGTCGACATGGGGTATCCG 60.008 63.158 17.16 0.00 38.76 4.18
3357 3576 1.771565 ATGAAGATCCACGTACGGGA 58.228 50.000 21.47 21.98 39.14 5.14
3358 3577 2.159156 TGAATGAAGATCCACGTACGGG 60.159 50.000 21.06 16.64 0.00 5.28
3359 3578 3.116300 CTGAATGAAGATCCACGTACGG 58.884 50.000 21.06 8.46 0.00 4.02
3360 3579 4.028852 TCTGAATGAAGATCCACGTACG 57.971 45.455 15.01 15.01 0.00 3.67
3448 3675 5.199024 ACGATGGAGATTCTCTTCTCATG 57.801 43.478 13.22 6.24 43.28 3.07
3560 3823 2.486191 GGAGATGATCCGAAAGCCACAT 60.486 50.000 0.00 0.00 38.67 3.21
3600 3869 0.810031 CATACTTCCGTTGGAGCCGG 60.810 60.000 0.00 0.00 46.83 6.13
3602 3871 1.095807 GCCATACTTCCGTTGGAGCC 61.096 60.000 0.00 0.00 31.21 4.70
3651 3920 0.393537 GGGGTGGACTCATCAAGCTG 60.394 60.000 0.00 0.00 0.00 4.24
3652 3921 0.842030 TGGGGTGGACTCATCAAGCT 60.842 55.000 0.00 0.00 0.00 3.74
3654 3923 1.952367 GCTTGGGGTGGACTCATCAAG 60.952 57.143 0.00 0.00 34.54 3.02
3655 3924 0.038166 GCTTGGGGTGGACTCATCAA 59.962 55.000 0.00 0.00 0.00 2.57
3657 3926 0.038166 TTGCTTGGGGTGGACTCATC 59.962 55.000 0.00 0.00 0.00 2.92
3658 3927 0.038744 CTTGCTTGGGGTGGACTCAT 59.961 55.000 0.00 0.00 0.00 2.90
3659 3928 1.455849 CTTGCTTGGGGTGGACTCA 59.544 57.895 0.00 0.00 0.00 3.41
3710 4028 0.756903 GTGTGGTGTGGTGTAGGAGT 59.243 55.000 0.00 0.00 0.00 3.85
3716 4034 1.377987 GTGTGGTGTGGTGTGGTGT 60.378 57.895 0.00 0.00 0.00 4.16
3718 4036 2.274104 GGTGTGGTGTGGTGTGGT 59.726 61.111 0.00 0.00 0.00 4.16
3719 4037 2.118404 GTGGTGTGGTGTGGTGTGG 61.118 63.158 0.00 0.00 0.00 4.17
3720 4038 1.377856 TGTGGTGTGGTGTGGTGTG 60.378 57.895 0.00 0.00 0.00 3.82
3721 4039 1.377987 GTGTGGTGTGGTGTGGTGT 60.378 57.895 0.00 0.00 0.00 4.16
3722 4040 1.375853 CTGTGTGGTGTGGTGTGGTG 61.376 60.000 0.00 0.00 0.00 4.17
3723 4041 1.077787 CTGTGTGGTGTGGTGTGGT 60.078 57.895 0.00 0.00 0.00 4.16
3724 4042 1.077787 ACTGTGTGGTGTGGTGTGG 60.078 57.895 0.00 0.00 0.00 4.17
3725 4043 2.097444 CACTGTGTGGTGTGGTGTG 58.903 57.895 0.00 0.00 33.04 3.82
3726 4044 4.635769 CACTGTGTGGTGTGGTGT 57.364 55.556 0.00 0.00 33.04 4.16
3744 4062 1.327303 TGTGGCCATTTTCAGGTGTC 58.673 50.000 9.72 0.00 0.00 3.67
3815 4140 2.548067 GCCGACTCTGAAAAGGTGAAGA 60.548 50.000 0.00 0.00 0.00 2.87
3817 4142 1.542547 GGCCGACTCTGAAAAGGTGAA 60.543 52.381 0.00 0.00 0.00 3.18
3822 4147 1.301677 GCAGGGCCGACTCTGAAAAG 61.302 60.000 1.39 0.00 33.11 2.27
3843 4170 3.324930 CTGCCTGCCTCCACCAGA 61.325 66.667 0.00 0.00 32.03 3.86
3895 4222 1.875963 GTGTCCGTTGCTGATTGGG 59.124 57.895 0.00 0.00 0.00 4.12
3935 4262 1.225855 ACACGAAATCGCTTCTTGCA 58.774 45.000 2.15 0.00 44.43 4.08
3937 4264 1.971962 GCAACACGAAATCGCTTCTTG 59.028 47.619 2.15 1.21 44.43 3.02
3963 4290 1.675219 GCTTTACCGGTGACCTGGA 59.325 57.895 19.93 0.00 0.00 3.86
3965 4292 1.740296 CCGCTTTACCGGTGACCTG 60.740 63.158 19.93 4.02 43.24 4.00
3973 4300 0.876342 GATGCTCCTCCGCTTTACCG 60.876 60.000 0.00 0.00 0.00 4.02
3974 4301 0.533085 GGATGCTCCTCCGCTTTACC 60.533 60.000 0.00 0.00 32.53 2.85
3975 4302 0.178068 TGGATGCTCCTCCGCTTTAC 59.822 55.000 4.21 0.00 38.21 2.01
3977 4304 1.222936 CTGGATGCTCCTCCGCTTT 59.777 57.895 4.21 0.00 38.21 3.51
3978 4305 2.739996 CCTGGATGCTCCTCCGCTT 61.740 63.158 0.00 0.00 38.21 4.68
3979 4306 3.160047 CCTGGATGCTCCTCCGCT 61.160 66.667 0.00 0.00 38.21 5.52
3980 4307 4.925861 GCCTGGATGCTCCTCCGC 62.926 72.222 0.00 0.00 38.21 5.54
3981 4308 4.247380 GGCCTGGATGCTCCTCCG 62.247 72.222 0.00 0.00 38.21 4.63
3982 4309 2.215451 TTTGGCCTGGATGCTCCTCC 62.215 60.000 3.32 0.00 37.46 4.30
4007 4342 4.290942 ACACCTAATAAGCTAGCCTCACT 58.709 43.478 12.13 0.00 0.00 3.41
4008 4343 4.342665 AGACACCTAATAAGCTAGCCTCAC 59.657 45.833 12.13 0.00 0.00 3.51
4009 4344 4.547671 AGACACCTAATAAGCTAGCCTCA 58.452 43.478 12.13 0.00 0.00 3.86
4010 4345 4.021807 GGAGACACCTAATAAGCTAGCCTC 60.022 50.000 12.13 5.91 35.41 4.70
4011 4346 3.898741 GGAGACACCTAATAAGCTAGCCT 59.101 47.826 12.13 0.00 35.41 4.58
4012 4347 3.305471 CGGAGACACCTAATAAGCTAGCC 60.305 52.174 12.13 0.00 36.31 3.93
4013 4348 3.318557 ACGGAGACACCTAATAAGCTAGC 59.681 47.826 6.62 6.62 36.31 3.42
4014 4349 5.282510 CAACGGAGACACCTAATAAGCTAG 58.717 45.833 0.00 0.00 36.31 3.42
4015 4350 4.441079 GCAACGGAGACACCTAATAAGCTA 60.441 45.833 0.00 0.00 36.31 3.32
4016 4351 3.679083 GCAACGGAGACACCTAATAAGCT 60.679 47.826 0.00 0.00 36.31 3.74
4017 4352 2.608090 GCAACGGAGACACCTAATAAGC 59.392 50.000 0.00 0.00 36.31 3.09
4018 4353 2.858344 CGCAACGGAGACACCTAATAAG 59.142 50.000 0.00 0.00 36.31 1.73
4019 4354 2.883574 CGCAACGGAGACACCTAATAA 58.116 47.619 0.00 0.00 36.31 1.40
4020 4355 1.470285 GCGCAACGGAGACACCTAATA 60.470 52.381 0.30 0.00 36.31 0.98
4021 4356 0.739813 GCGCAACGGAGACACCTAAT 60.740 55.000 0.30 0.00 36.31 1.73
4022 4357 1.373748 GCGCAACGGAGACACCTAA 60.374 57.895 0.30 0.00 36.31 2.69
4023 4358 2.260434 GCGCAACGGAGACACCTA 59.740 61.111 0.30 0.00 36.31 3.08
4024 4359 4.681978 GGCGCAACGGAGACACCT 62.682 66.667 10.83 0.00 36.31 4.00
4038 4373 4.032900 GCATCACCAAATATATACTCGGCG 59.967 45.833 0.00 0.00 0.00 6.46
4127 4473 1.604604 AAACGTGTGGATTGGGACAG 58.395 50.000 0.00 0.00 42.39 3.51
4216 4564 5.045286 TCTCCCTTACTTTCGGTAGTACTCT 60.045 44.000 0.00 0.00 30.62 3.24
4217 4565 5.189180 TCTCCCTTACTTTCGGTAGTACTC 58.811 45.833 0.00 0.00 30.62 2.59
4219 4567 5.904362 TTCTCCCTTACTTTCGGTAGTAC 57.096 43.478 0.00 0.00 30.62 2.73
4220 4568 5.106157 CGTTTCTCCCTTACTTTCGGTAGTA 60.106 44.000 0.00 0.00 0.00 1.82
4221 4569 4.321527 CGTTTCTCCCTTACTTTCGGTAGT 60.322 45.833 0.00 0.00 0.00 2.73
4222 4570 4.082571 TCGTTTCTCCCTTACTTTCGGTAG 60.083 45.833 0.00 0.00 0.00 3.18
4243 4613 2.513204 CAGAGTGCCATGGCCTCG 60.513 66.667 32.11 26.10 40.66 4.63
4264 4634 2.621055 ACAGACAGACAGACAGACAGAC 59.379 50.000 0.00 0.00 0.00 3.51
4271 4641 2.620585 CAGACAGACAGACAGACAGACA 59.379 50.000 0.00 0.00 0.00 3.41
4272 4642 2.881513 TCAGACAGACAGACAGACAGAC 59.118 50.000 0.00 0.00 0.00 3.51
4273 4643 2.881513 GTCAGACAGACAGACAGACAGA 59.118 50.000 0.00 0.00 46.77 3.41
4274 4644 3.281341 GTCAGACAGACAGACAGACAG 57.719 52.381 0.00 0.00 46.77 3.51
4356 4726 9.522804 TTTTGTTCATCTGTTGGTGTAAATAAC 57.477 29.630 0.00 0.00 0.00 1.89
4386 4756 6.067217 AGAATGACAGTAAATTGCTAGGGT 57.933 37.500 0.00 0.00 0.00 4.34
4387 4757 7.396540 AAAGAATGACAGTAAATTGCTAGGG 57.603 36.000 0.00 0.00 0.00 3.53
4404 4774 5.474876 GGCCCTTATGATCCACTAAAGAATG 59.525 44.000 0.00 0.00 0.00 2.67
4408 4778 4.713792 AGGCCCTTATGATCCACTAAAG 57.286 45.455 0.00 0.00 0.00 1.85
4420 4790 1.212935 CTTGCTGGTGTAGGCCCTTAT 59.787 52.381 0.00 0.00 0.00 1.73
4476 4851 7.710907 TGTCTTGATCATTATGTACCTAACAGC 59.289 37.037 0.00 0.00 42.70 4.40
4485 4860 5.822519 GCTTGGGTGTCTTGATCATTATGTA 59.177 40.000 0.00 0.00 0.00 2.29
4486 4861 4.641989 GCTTGGGTGTCTTGATCATTATGT 59.358 41.667 0.00 0.00 0.00 2.29
4487 4862 4.641541 TGCTTGGGTGTCTTGATCATTATG 59.358 41.667 0.00 0.00 0.00 1.90
4488 4863 4.858850 TGCTTGGGTGTCTTGATCATTAT 58.141 39.130 0.00 0.00 0.00 1.28
4492 4867 2.106338 TCTTGCTTGGGTGTCTTGATCA 59.894 45.455 0.00 0.00 0.00 2.92
4506 4881 5.105917 CCGGGTATGTTGTTAATTCTTGCTT 60.106 40.000 0.00 0.00 0.00 3.91
4507 4882 4.398044 CCGGGTATGTTGTTAATTCTTGCT 59.602 41.667 0.00 0.00 0.00 3.91
4508 4883 4.396790 TCCGGGTATGTTGTTAATTCTTGC 59.603 41.667 0.00 0.00 0.00 4.01
4509 4884 5.646360 AGTCCGGGTATGTTGTTAATTCTTG 59.354 40.000 0.00 0.00 0.00 3.02
4512 4887 7.496591 TCATTAGTCCGGGTATGTTGTTAATTC 59.503 37.037 0.00 0.00 0.00 2.17
4515 4890 6.297080 TCATTAGTCCGGGTATGTTGTTAA 57.703 37.500 0.00 0.00 0.00 2.01
4516 4891 5.936187 TCATTAGTCCGGGTATGTTGTTA 57.064 39.130 0.00 0.00 0.00 2.41
4518 4893 4.500887 CGATCATTAGTCCGGGTATGTTGT 60.501 45.833 0.00 0.00 0.00 3.32
4528 4908 1.593006 GTGGCAACGATCATTAGTCCG 59.407 52.381 0.00 0.00 42.51 4.79
4535 4915 0.677731 CTGGTGGTGGCAACGATCAT 60.678 55.000 0.00 0.00 42.51 2.45
4578 4958 2.290464 ACGGAGAGGATAGTTCAGTCG 58.710 52.381 0.00 0.00 0.00 4.18
4595 4975 3.861113 ACACGTACATGCATACTTAACGG 59.139 43.478 17.17 11.23 33.44 4.44
4596 4976 4.777846 GCACACGTACATGCATACTTAACG 60.778 45.833 12.35 7.81 41.65 3.18
4598 4978 3.619483 GGCACACGTACATGCATACTTAA 59.381 43.478 17.35 0.00 43.93 1.85
4599 4979 3.191669 GGCACACGTACATGCATACTTA 58.808 45.455 17.35 0.00 43.93 2.24
4600 4980 2.006888 GGCACACGTACATGCATACTT 58.993 47.619 17.35 0.00 43.93 2.24
4601 4981 1.066502 TGGCACACGTACATGCATACT 60.067 47.619 17.35 0.00 43.93 2.12
4602 4982 1.364721 TGGCACACGTACATGCATAC 58.635 50.000 17.35 0.00 43.93 2.39
4603 4983 3.842869 TGGCACACGTACATGCATA 57.157 47.368 17.35 6.03 43.93 3.14
4604 4984 4.711892 TGGCACACGTACATGCAT 57.288 50.000 17.35 0.00 43.93 3.96
4615 4995 0.107643 TTGAACGAGGATGTGGCACA 59.892 50.000 24.36 24.36 0.00 4.57
4616 4996 1.234821 TTTGAACGAGGATGTGGCAC 58.765 50.000 11.55 11.55 0.00 5.01
4617 4997 2.198827 ATTTGAACGAGGATGTGGCA 57.801 45.000 0.00 0.00 0.00 4.92
4618 4998 4.900635 AATATTTGAACGAGGATGTGGC 57.099 40.909 0.00 0.00 0.00 5.01
4619 4999 6.094048 ACAGAAATATTTGAACGAGGATGTGG 59.906 38.462 5.17 0.00 0.00 4.17
4620 5000 7.076842 ACAGAAATATTTGAACGAGGATGTG 57.923 36.000 5.17 0.00 0.00 3.21
4621 5001 7.362056 CCAACAGAAATATTTGAACGAGGATGT 60.362 37.037 5.17 0.00 0.00 3.06
4622 5002 6.968904 CCAACAGAAATATTTGAACGAGGATG 59.031 38.462 5.17 0.00 0.00 3.51
4623 5003 6.884295 TCCAACAGAAATATTTGAACGAGGAT 59.116 34.615 5.17 0.00 0.00 3.24
4624 5004 6.148811 GTCCAACAGAAATATTTGAACGAGGA 59.851 38.462 5.17 3.46 0.00 3.71
4625 5005 6.072728 TGTCCAACAGAAATATTTGAACGAGG 60.073 38.462 5.17 1.15 0.00 4.63
4626 5006 6.898041 TGTCCAACAGAAATATTTGAACGAG 58.102 36.000 5.17 0.00 0.00 4.18
4627 5007 6.869315 TGTCCAACAGAAATATTTGAACGA 57.131 33.333 5.17 0.00 0.00 3.85
4628 5008 6.582295 CCTTGTCCAACAGAAATATTTGAACG 59.418 38.462 5.17 0.00 0.00 3.95
4629 5009 7.657336 TCCTTGTCCAACAGAAATATTTGAAC 58.343 34.615 5.17 0.00 0.00 3.18
4630 5010 7.039784 CCTCCTTGTCCAACAGAAATATTTGAA 60.040 37.037 5.17 0.00 0.00 2.69
4635 5015 5.014123 TGTCCTCCTTGTCCAACAGAAATAT 59.986 40.000 0.00 0.00 0.00 1.28
4653 5033 1.535462 CCACGTCCAACATTTGTCCTC 59.465 52.381 0.00 0.00 0.00 3.71
4674 5054 4.328983 CCTTTAAGTATGCACGTAGGTGTG 59.671 45.833 16.36 1.64 46.13 3.82
4675 5055 4.221262 TCCTTTAAGTATGCACGTAGGTGT 59.779 41.667 16.36 1.02 46.13 4.16
4677 5057 4.679905 GCTCCTTTAAGTATGCACGTAGGT 60.680 45.833 0.00 0.00 0.00 3.08
4679 5059 4.430007 TGCTCCTTTAAGTATGCACGTAG 58.570 43.478 0.00 0.00 0.00 3.51
4680 5060 4.430007 CTGCTCCTTTAAGTATGCACGTA 58.570 43.478 0.00 0.00 0.00 3.57
4681 5061 3.262420 CTGCTCCTTTAAGTATGCACGT 58.738 45.455 0.00 0.00 0.00 4.49
4683 5063 2.356069 GGCTGCTCCTTTAAGTATGCAC 59.644 50.000 0.00 0.00 0.00 4.57
4685 5065 2.924421 AGGCTGCTCCTTTAAGTATGC 58.076 47.619 0.00 0.00 44.75 3.14
4696 5076 1.174712 TGCAAAGTGAAGGCTGCTCC 61.175 55.000 0.00 0.00 35.78 4.70
4697 5077 0.039708 GTGCAAAGTGAAGGCTGCTC 60.040 55.000 0.00 0.00 35.78 4.26
4698 5078 0.752743 TGTGCAAAGTGAAGGCTGCT 60.753 50.000 0.00 0.00 35.78 4.24
4699 5079 0.316204 ATGTGCAAAGTGAAGGCTGC 59.684 50.000 0.00 0.00 35.32 5.25
4700 5080 1.933500 GCATGTGCAAAGTGAAGGCTG 60.934 52.381 0.00 0.00 41.59 4.85
4701 5081 0.316204 GCATGTGCAAAGTGAAGGCT 59.684 50.000 0.00 0.00 41.59 4.58
4702 5082 2.818350 GCATGTGCAAAGTGAAGGC 58.182 52.632 0.00 0.00 41.59 4.35
4725 5105 2.112718 GGGCTCCATGGCTAGCAG 59.887 66.667 22.97 9.94 40.61 4.24
4760 5140 1.806542 CCTGTTCGGTGGAATTGTGAG 59.193 52.381 0.00 0.00 34.05 3.51
4764 5144 1.165270 GGTCCTGTTCGGTGGAATTG 58.835 55.000 0.00 0.00 34.05 2.32
4834 5226 1.216175 CACTGGATCCCATGGGTCAAT 59.784 52.381 30.28 16.94 36.47 2.57
4876 5279 7.579589 TCATTAAAAACATTCCGAATGCTTG 57.420 32.000 19.13 4.39 42.69 4.01
4895 5298 5.674525 CAGATAAGGCTCACTGGTTCATTA 58.325 41.667 0.00 0.00 0.00 1.90
4903 5306 4.978083 ATTTTGCAGATAAGGCTCACTG 57.022 40.909 9.94 9.94 0.00 3.66
4906 5309 5.126067 GGAGTATTTTGCAGATAAGGCTCA 58.874 41.667 0.00 0.00 0.00 4.26
4911 5314 6.352516 ACAGAGGGAGTATTTTGCAGATAAG 58.647 40.000 0.00 0.00 0.00 1.73
4912 5315 6.313519 ACAGAGGGAGTATTTTGCAGATAA 57.686 37.500 0.00 0.00 0.00 1.75
4916 5327 6.173339 TCTTTACAGAGGGAGTATTTTGCAG 58.827 40.000 0.00 0.00 0.00 4.41
4946 5363 6.742559 ACTCCCTCTGTTAACTTTTACAGA 57.257 37.500 7.22 9.74 46.19 3.41
4947 5364 7.668492 AGTACTCCCTCTGTTAACTTTTACAG 58.332 38.462 7.22 2.37 42.41 2.74
4948 5365 7.607615 AGTACTCCCTCTGTTAACTTTTACA 57.392 36.000 7.22 0.00 0.00 2.41
4949 5366 9.987272 TTTAGTACTCCCTCTGTTAACTTTTAC 57.013 33.333 7.22 0.00 0.00 2.01
4950 5367 9.987272 GTTTAGTACTCCCTCTGTTAACTTTTA 57.013 33.333 7.22 0.00 0.00 1.52
4954 5371 6.006449 TCGTTTAGTACTCCCTCTGTTAACT 58.994 40.000 7.22 0.00 0.00 2.24
4955 5372 6.072230 AGTCGTTTAGTACTCCCTCTGTTAAC 60.072 42.308 0.00 0.00 0.00 2.01
4956 5373 6.006449 AGTCGTTTAGTACTCCCTCTGTTAA 58.994 40.000 0.00 0.00 0.00 2.01
4957 5374 5.564550 AGTCGTTTAGTACTCCCTCTGTTA 58.435 41.667 0.00 0.00 0.00 2.41
4958 5375 4.405548 AGTCGTTTAGTACTCCCTCTGTT 58.594 43.478 0.00 0.00 0.00 3.16
4959 5376 4.031636 AGTCGTTTAGTACTCCCTCTGT 57.968 45.455 0.00 0.00 0.00 3.41
4960 5377 4.217983 ACAAGTCGTTTAGTACTCCCTCTG 59.782 45.833 0.00 0.00 0.00 3.35
4961 5378 4.217983 CACAAGTCGTTTAGTACTCCCTCT 59.782 45.833 0.00 0.00 0.00 3.69
4962 5379 4.022503 ACACAAGTCGTTTAGTACTCCCTC 60.023 45.833 0.00 0.00 0.00 4.30
4963 5380 3.893813 ACACAAGTCGTTTAGTACTCCCT 59.106 43.478 0.00 0.00 0.00 4.20
4964 5381 4.248691 ACACAAGTCGTTTAGTACTCCC 57.751 45.455 0.00 0.00 0.00 4.30
4965 5382 8.454106 TCTAATACACAAGTCGTTTAGTACTCC 58.546 37.037 0.00 0.00 0.00 3.85
4973 5390 9.784680 CTGTACTATCTAATACACAAGTCGTTT 57.215 33.333 0.00 0.00 0.00 3.60
4974 5391 8.954350 ACTGTACTATCTAATACACAAGTCGTT 58.046 33.333 0.00 0.00 0.00 3.85
4975 5392 8.503458 ACTGTACTATCTAATACACAAGTCGT 57.497 34.615 0.00 0.00 0.00 4.34
4976 5393 9.861138 GTACTGTACTATCTAATACACAAGTCG 57.139 37.037 10.64 0.00 0.00 4.18
5031 5451 3.295093 TGCCATTGGTTCACTTTTCTGA 58.705 40.909 4.26 0.00 0.00 3.27
5105 5539 3.889196 TGCGACCTTGTGTTGAAATAC 57.111 42.857 0.00 0.00 0.00 1.89
5140 5574 3.262660 TGGAGATCTGCTGAGAACATTGT 59.737 43.478 15.82 0.00 0.00 2.71
5176 5610 5.061853 AGTATGATGATGAACATGGCTGAC 58.938 41.667 0.00 0.00 39.56 3.51
5179 5613 6.594744 TGTTAGTATGATGATGAACATGGCT 58.405 36.000 0.00 0.00 39.56 4.75
5202 5636 4.206698 GCAGTAAGCAAGCACTCATATG 57.793 45.455 0.00 0.00 44.79 1.78
5239 5673 5.169295 GTGTCTCCGTAAAGCTTAGATGTT 58.831 41.667 0.00 0.00 0.00 2.71
5279 5718 3.929955 TGATGATGGACATGGCTGTAA 57.070 42.857 0.00 0.00 39.56 2.41
5295 5734 8.368126 GCAAGAAAATCACGATTTAGTTTGATG 58.632 33.333 18.14 9.05 39.88 3.07
5331 5770 0.246635 TTCTCGGACTTGCTAGGTGC 59.753 55.000 0.00 0.00 43.25 5.01
5332 5771 1.819288 TCTTCTCGGACTTGCTAGGTG 59.181 52.381 0.00 0.00 0.00 4.00
5348 5787 4.271687 CAATTATAACGTGCGCCTTCTTC 58.728 43.478 4.18 0.00 0.00 2.87
5411 5850 2.372172 CCACCAGAAGAACCCTACAAGT 59.628 50.000 0.00 0.00 0.00 3.16
5416 5855 3.269592 TTCTCCACCAGAAGAACCCTA 57.730 47.619 0.00 0.00 36.08 3.53
5445 5884 3.498774 ACCTGATTGTCTTGCTCTTGT 57.501 42.857 0.00 0.00 0.00 3.16
5509 5948 7.435068 TGTTTCAACTAAAGAGAGGTAATGC 57.565 36.000 0.00 0.00 0.00 3.56
5538 5977 8.437575 AGAGGTCAGTTTTTATTCCAGAAGTTA 58.562 33.333 0.00 0.00 0.00 2.24
5550 5989 8.514594 CATCAGCAAATAAGAGGTCAGTTTTTA 58.485 33.333 0.00 0.00 0.00 1.52
5578 6017 9.314321 CCTACTGAAACATCATACGTAGAAATT 57.686 33.333 0.08 0.00 0.00 1.82
5587 6026 4.811557 GGTGCTCCTACTGAAACATCATAC 59.188 45.833 0.00 0.00 0.00 2.39
5735 6174 0.880278 TCACCGAGCTTGTTGTCAGC 60.880 55.000 0.00 0.00 0.00 4.26
5755 6194 0.850784 ATACTGGCCCATAACCACCC 59.149 55.000 0.00 0.00 32.49 4.61
5905 6368 0.446222 ATTTTCAATCCGACGCGTGG 59.554 50.000 20.70 17.39 0.00 4.94
6034 6497 3.374988 CGATGCTGGAGTTTTGCTATCAA 59.625 43.478 0.00 0.00 0.00 2.57
6042 6505 3.356529 AGATTCCGATGCTGGAGTTTT 57.643 42.857 0.00 0.00 39.72 2.43
6087 6550 6.611613 ATGAGTATCTTCTCTTGTCCACAA 57.388 37.500 0.00 0.00 35.68 3.33
6150 6613 2.897969 AGAGGTCAAGTGTGTACCGAAT 59.102 45.455 0.00 0.00 38.37 3.34
6165 6634 4.393371 GGAACTTTGATGCTTACAGAGGTC 59.607 45.833 0.00 0.00 36.09 3.85
6174 6643 3.760684 GAGGACATGGAACTTTGATGCTT 59.239 43.478 0.00 0.00 0.00 3.91
6189 6658 5.485353 TCAGTATCTGTTCTTTGGAGGACAT 59.515 40.000 0.00 0.00 40.60 3.06
6227 6698 4.005650 TGCTCTTGGATTTGTCTGATGAC 58.994 43.478 0.00 0.00 43.20 3.06
6257 6728 1.012486 GGTACCGAGTTTGCCAGTCG 61.012 60.000 0.00 3.73 46.48 4.18
6269 6740 0.594602 CCTCGATTATGCGGTACCGA 59.405 55.000 37.62 22.05 42.83 4.69
6395 6866 1.474077 GCCATGCCGAAGTCTGAAATT 59.526 47.619 0.00 0.00 0.00 1.82
6470 6941 6.170506 TGAATTGCTGGTCGAAACTTACTAT 58.829 36.000 0.00 0.00 0.00 2.12
6482 6953 3.256631 ACAAGGTGATTGAATTGCTGGTC 59.743 43.478 0.00 0.00 41.83 4.02
6485 6956 4.508461 TGACAAGGTGATTGAATTGCTG 57.492 40.909 0.00 0.00 41.83 4.41
6505 6976 8.712363 CATTAGGAGGTTAACATTGTCGATATG 58.288 37.037 8.10 8.45 0.00 1.78
6522 6993 4.989875 AAGGATCATCCACATTAGGAGG 57.010 45.455 6.42 0.00 41.90 4.30
6531 7002 3.393800 CGACCATGTAAGGATCATCCAC 58.606 50.000 6.42 0.00 39.61 4.02
6561 7032 0.745845 GAGCCATGTACCCACTGCAG 60.746 60.000 13.48 13.48 0.00 4.41
6570 7041 0.030369 CGTACTCGGGAGCCATGTAC 59.970 60.000 0.00 0.00 32.51 2.90
6582 7053 2.352001 CCGTCCATCGCGTACTCG 60.352 66.667 5.77 0.00 38.35 4.18
6648 7119 0.032540 TGATGCCGGTGATGATCTCG 59.967 55.000 1.90 0.00 0.00 4.04
6752 7223 3.072915 AGATGGTGGTGAGACATTGACAA 59.927 43.478 0.00 0.00 0.00 3.18
6753 7224 2.639347 AGATGGTGGTGAGACATTGACA 59.361 45.455 0.00 0.00 0.00 3.58
7186 7658 5.283060 ACAAAATTCAGTGCTAAGCTACG 57.717 39.130 0.00 0.00 0.00 3.51
7187 7659 6.438763 ACAACAAAATTCAGTGCTAAGCTAC 58.561 36.000 0.00 0.00 0.00 3.58
7188 7660 6.633500 ACAACAAAATTCAGTGCTAAGCTA 57.367 33.333 0.00 0.00 0.00 3.32
7189 7661 5.520376 ACAACAAAATTCAGTGCTAAGCT 57.480 34.783 0.00 0.00 0.00 3.74
7281 7754 2.285977 AGGTGACGAACAACTTCAACC 58.714 47.619 0.00 0.00 45.14 3.77
7380 7855 2.836154 GGCATATTCCTCCCGCCA 59.164 61.111 0.00 0.00 42.50 5.69
7439 7921 0.398696 TCTGGCCCAAAGTAAAGCGA 59.601 50.000 0.00 0.00 0.00 4.93
7629 8119 7.870588 ATCAACACGAGTAGAAGAAAAGTAC 57.129 36.000 0.00 0.00 0.00 2.73
7631 8121 9.490379 AATTATCAACACGAGTAGAAGAAAAGT 57.510 29.630 0.00 0.00 0.00 2.66
7688 8179 0.247736 GATGCTCTTCACCGGTCAGT 59.752 55.000 2.59 0.00 0.00 3.41
7695 8186 2.983229 AGTGACATGATGCTCTTCACC 58.017 47.619 0.00 0.00 37.84 4.02
7750 8241 2.713877 GCCGTATACAAACCTTTCCCA 58.286 47.619 3.32 0.00 0.00 4.37
7751 8242 1.667212 CGCCGTATACAAACCTTTCCC 59.333 52.381 3.32 0.00 0.00 3.97
7752 8243 1.667212 CCGCCGTATACAAACCTTTCC 59.333 52.381 3.32 0.00 0.00 3.13
7754 8245 2.349590 GTCCGCCGTATACAAACCTTT 58.650 47.619 3.32 0.00 0.00 3.11
7755 8246 1.405933 GGTCCGCCGTATACAAACCTT 60.406 52.381 3.32 0.00 0.00 3.50
7756 8247 0.176449 GGTCCGCCGTATACAAACCT 59.824 55.000 3.32 0.00 0.00 3.50
7783 8274 3.767230 CACGCGACCAGCTGAACG 61.767 66.667 17.39 20.12 45.59 3.95
7784 8275 4.077188 GCACGCGACCAGCTGAAC 62.077 66.667 17.39 7.67 45.59 3.18
7804 8295 0.386100 CTATCAGGTGATCCGACGCG 60.386 60.000 3.53 3.53 39.05 6.01
7805 8296 0.664767 GCTATCAGGTGATCCGACGC 60.665 60.000 0.00 0.00 39.05 5.19
7807 8298 0.664767 GCGCTATCAGGTGATCCGAC 60.665 60.000 0.00 5.15 39.05 4.79
7808 8299 1.660355 GCGCTATCAGGTGATCCGA 59.340 57.895 0.00 0.00 39.05 4.55
7809 8300 1.730902 CGCGCTATCAGGTGATCCG 60.731 63.158 5.56 2.60 39.05 4.18
7810 8301 0.941463 CACGCGCTATCAGGTGATCC 60.941 60.000 5.73 0.00 36.05 3.36
7811 8302 0.249073 ACACGCGCTATCAGGTGATC 60.249 55.000 16.14 0.00 36.05 2.92
7813 8304 1.138883 GACACGCGCTATCAGGTGA 59.861 57.895 16.14 0.00 34.59 4.02
7814 8305 0.867753 GAGACACGCGCTATCAGGTG 60.868 60.000 5.73 7.63 36.50 4.00
7815 8306 1.032657 AGAGACACGCGCTATCAGGT 61.033 55.000 5.73 0.00 0.00 4.00
7817 8308 1.914634 AAAGAGACACGCGCTATCAG 58.085 50.000 5.73 0.00 0.00 2.90
7818 8309 3.128068 TCTTAAAGAGACACGCGCTATCA 59.872 43.478 5.73 0.00 0.00 2.15
7823 9351 1.978542 TCTCTTAAAGAGACACGCGC 58.021 50.000 5.73 0.00 45.77 6.86
7856 9481 9.587772 GTACTTGTGATTGTTATGAGTATGAGT 57.412 33.333 0.00 0.00 0.00 3.41
7857 9482 9.586435 TGTACTTGTGATTGTTATGAGTATGAG 57.414 33.333 0.00 0.00 0.00 2.90
7940 9565 9.971922 AGAAGGTGTTTTAAAGAGATTTCATTG 57.028 29.630 0.00 0.00 0.00 2.82
7982 9607 9.787435 TTGATACTGTGGTAAGTAATTCAAACT 57.213 29.630 0.00 0.00 36.28 2.66
7986 9611 9.817809 GAGATTGATACTGTGGTAAGTAATTCA 57.182 33.333 0.00 0.00 36.28 2.57
7988 9613 9.823647 CAGAGATTGATACTGTGGTAAGTAATT 57.176 33.333 0.00 0.00 36.28 1.40
7989 9614 7.928706 GCAGAGATTGATACTGTGGTAAGTAAT 59.071 37.037 0.00 0.00 36.28 1.89
7990 9615 7.124298 AGCAGAGATTGATACTGTGGTAAGTAA 59.876 37.037 0.00 0.00 37.54 2.24
7991 9616 6.607600 AGCAGAGATTGATACTGTGGTAAGTA 59.392 38.462 0.00 0.00 37.54 2.24
7992 9617 5.423610 AGCAGAGATTGATACTGTGGTAAGT 59.576 40.000 0.00 0.00 37.54 2.24
7993 9618 5.911752 AGCAGAGATTGATACTGTGGTAAG 58.088 41.667 0.00 0.00 37.54 2.34
7994 9619 5.450550 CGAGCAGAGATTGATACTGTGGTAA 60.451 44.000 0.00 0.00 38.94 2.85
7995 9620 4.036852 CGAGCAGAGATTGATACTGTGGTA 59.963 45.833 0.00 0.00 38.94 3.25
7996 9621 3.181482 CGAGCAGAGATTGATACTGTGGT 60.181 47.826 0.00 0.00 40.87 4.16
7997 9622 3.067320 TCGAGCAGAGATTGATACTGTGG 59.933 47.826 0.00 0.00 34.60 4.17
7998 9623 4.298744 TCGAGCAGAGATTGATACTGTG 57.701 45.455 0.00 0.00 34.60 3.66
7999 9624 4.642437 TCTTCGAGCAGAGATTGATACTGT 59.358 41.667 0.00 0.00 34.60 3.55
8000 9625 5.180367 TCTTCGAGCAGAGATTGATACTG 57.820 43.478 0.00 0.00 35.14 2.74
8001 9626 5.843673 TTCTTCGAGCAGAGATTGATACT 57.156 39.130 0.00 0.00 0.00 2.12
8010 9635 4.377839 TGGAGTATTTCTTCGAGCAGAG 57.622 45.455 0.00 0.00 0.00 3.35
8012 9637 5.862924 TTTTGGAGTATTTCTTCGAGCAG 57.137 39.130 0.00 0.00 0.00 4.24
8041 9666 3.251004 CAGTCCAAGTGCAACCTCTTTAC 59.749 47.826 0.00 0.00 37.80 2.01
8045 9670 0.109342 CCAGTCCAAGTGCAACCTCT 59.891 55.000 0.00 0.00 37.80 3.69
8046 9671 0.108585 TCCAGTCCAAGTGCAACCTC 59.891 55.000 0.00 0.00 37.80 3.85
8047 9672 0.109342 CTCCAGTCCAAGTGCAACCT 59.891 55.000 0.00 0.00 37.80 3.50
8049 9674 0.819259 TGCTCCAGTCCAAGTGCAAC 60.819 55.000 0.00 0.00 30.20 4.17
8050 9675 0.106769 TTGCTCCAGTCCAAGTGCAA 60.107 50.000 0.00 0.00 39.42 4.08
8055 9680 1.081892 CATCGTTGCTCCAGTCCAAG 58.918 55.000 0.00 0.00 0.00 3.61
8072 9697 2.494059 CGGGTGAAAGAGTGACAACAT 58.506 47.619 0.00 0.00 0.00 2.71
8091 9716 8.619146 AAATCATTATTTGTACTGTTCATGCG 57.381 30.769 0.00 0.00 33.97 4.73
8101 9726 7.897800 GGCGCTTTCAAAAATCATTATTTGTAC 59.102 33.333 7.64 0.00 37.68 2.90
8112 9737 3.642705 ACTCAAGGCGCTTTCAAAAATC 58.357 40.909 7.64 0.00 0.00 2.17
8113 9738 3.642705 GACTCAAGGCGCTTTCAAAAAT 58.357 40.909 7.64 0.00 0.00 1.82
8133 9758 3.117701 TCTCCATATTTTTGGATGGGCGA 60.118 43.478 1.25 0.00 44.66 5.54
8215 9840 1.228124 GGCCAGTGTAAGCACCACA 60.228 57.895 0.00 0.00 46.35 4.17
8226 9851 7.279758 TCAAACATTAAAAAGAAAAGGCCAGTG 59.720 33.333 5.01 0.00 0.00 3.66
8227 9852 7.334858 TCAAACATTAAAAAGAAAAGGCCAGT 58.665 30.769 5.01 0.00 0.00 4.00
8232 9857 9.987272 ATCCTCTCAAACATTAAAAAGAAAAGG 57.013 29.630 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.