Multiple sequence alignment - TraesCS1D01G320600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G320600 chr1D 100.000 4147 0 0 1 4147 414451870 414447724 0.000000e+00 7659
1 TraesCS1D01G320600 chr1D 89.334 1322 111 17 2841 4147 843678 844984 0.000000e+00 1633
2 TraesCS1D01G320600 chr3D 97.508 3531 74 4 627 4147 45063226 45059700 0.000000e+00 6021
3 TraesCS1D01G320600 chr3D 93.373 2535 101 33 1644 4147 19765755 19763257 0.000000e+00 3688
4 TraesCS1D01G320600 chr3D 84.147 3665 296 120 631 4147 502048028 502044501 0.000000e+00 3286
5 TraesCS1D01G320600 chr3D 93.952 926 48 3 630 1555 19766671 19765754 0.000000e+00 1393
6 TraesCS1D01G320600 chr3D 98.400 125 2 0 1 125 595946052 595945928 1.940000e-53 220
7 TraesCS1D01G320600 chr3D 98.387 124 2 0 1 124 114389905 114389782 6.980000e-53 219
8 TraesCS1D01G320600 chr3D 96.923 130 2 2 1 129 406153531 406153659 2.510000e-52 217
9 TraesCS1D01G320600 chr5D 97.264 3545 62 9 629 4147 408555344 408551809 0.000000e+00 5976
10 TraesCS1D01G320600 chr5D 98.387 124 2 0 1 124 58672775 58672898 6.980000e-53 219
11 TraesCS1D01G320600 chr5D 97.656 128 2 1 1 128 384193192 384193318 6.980000e-53 219
12 TraesCS1D01G320600 chr7D 96.842 3547 78 11 629 4147 92234552 92231012 0.000000e+00 5899
13 TraesCS1D01G320600 chr7D 96.043 3538 77 30 629 4147 631818589 631815096 0.000000e+00 5699
14 TraesCS1D01G320600 chr7D 92.981 983 46 6 629 1595 393113869 393112894 0.000000e+00 1411
15 TraesCS1D01G320600 chr5A 93.132 3582 169 30 628 4147 701985673 701982107 0.000000e+00 5180
16 TraesCS1D01G320600 chr5A 91.174 1201 66 11 2968 4147 574019236 574018055 0.000000e+00 1594
17 TraesCS1D01G320600 chr7A 95.330 2548 104 7 1611 4147 15601172 15598629 0.000000e+00 4032
18 TraesCS1D01G320600 chrUn 95.176 2529 88 21 1625 4147 70157661 70155161 0.000000e+00 3964
19 TraesCS1D01G320600 chrUn 87.255 1734 143 40 2462 4147 97176296 97177999 0.000000e+00 1906
20 TraesCS1D01G320600 chrUn 92.754 966 44 6 630 1595 70158593 70157654 0.000000e+00 1373
21 TraesCS1D01G320600 chr4B 93.304 2300 126 14 904 3192 657805199 657802917 0.000000e+00 3369
22 TraesCS1D01G320600 chr6A 91.647 1736 85 24 2457 4147 56128312 56126592 0.000000e+00 2348
23 TraesCS1D01G320600 chr4D 96.978 1125 31 3 628 1750 375069356 375070479 0.000000e+00 1886
24 TraesCS1D01G320600 chr4D 98.387 124 2 0 1 124 469102095 469101972 6.980000e-53 219
25 TraesCS1D01G320600 chr4D 98.387 124 2 0 1 124 469123990 469124113 6.980000e-53 219
26 TraesCS1D01G320600 chr2B 86.223 1459 156 24 2716 4147 80093087 80091647 0.000000e+00 1539
27 TraesCS1D01G320600 chr2D 93.395 969 54 5 630 1595 624287168 624288129 0.000000e+00 1426
28 TraesCS1D01G320600 chr2D 98.400 125 2 0 1 125 114802252 114802128 1.940000e-53 220
29 TraesCS1D01G320600 chr1B 97.233 506 13 1 125 630 559333852 559333348 0.000000e+00 856
30 TraesCS1D01G320600 chr1B 96.245 506 19 0 125 630 537658372 537657867 0.000000e+00 830
31 TraesCS1D01G320600 chr1B 83.760 899 109 24 630 1513 572992371 572991495 0.000000e+00 817
32 TraesCS1D01G320600 chr1A 95.692 325 14 0 125 449 511148570 511148246 1.320000e-144 523
33 TraesCS1D01G320600 chr1A 85.484 186 24 2 445 630 511148316 511148134 1.520000e-44 191
34 TraesCS1D01G320600 chr5B 98.400 125 2 0 1 125 74638808 74638684 1.940000e-53 220


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G320600 chr1D 414447724 414451870 4146 True 7659.0 7659 100.0000 1 4147 1 chr1D.!!$R1 4146
1 TraesCS1D01G320600 chr1D 843678 844984 1306 False 1633.0 1633 89.3340 2841 4147 1 chr1D.!!$F1 1306
2 TraesCS1D01G320600 chr3D 45059700 45063226 3526 True 6021.0 6021 97.5080 627 4147 1 chr3D.!!$R1 3520
3 TraesCS1D01G320600 chr3D 502044501 502048028 3527 True 3286.0 3286 84.1470 631 4147 1 chr3D.!!$R3 3516
4 TraesCS1D01G320600 chr3D 19763257 19766671 3414 True 2540.5 3688 93.6625 630 4147 2 chr3D.!!$R5 3517
5 TraesCS1D01G320600 chr5D 408551809 408555344 3535 True 5976.0 5976 97.2640 629 4147 1 chr5D.!!$R1 3518
6 TraesCS1D01G320600 chr7D 92231012 92234552 3540 True 5899.0 5899 96.8420 629 4147 1 chr7D.!!$R1 3518
7 TraesCS1D01G320600 chr7D 631815096 631818589 3493 True 5699.0 5699 96.0430 629 4147 1 chr7D.!!$R3 3518
8 TraesCS1D01G320600 chr7D 393112894 393113869 975 True 1411.0 1411 92.9810 629 1595 1 chr7D.!!$R2 966
9 TraesCS1D01G320600 chr5A 701982107 701985673 3566 True 5180.0 5180 93.1320 628 4147 1 chr5A.!!$R2 3519
10 TraesCS1D01G320600 chr5A 574018055 574019236 1181 True 1594.0 1594 91.1740 2968 4147 1 chr5A.!!$R1 1179
11 TraesCS1D01G320600 chr7A 15598629 15601172 2543 True 4032.0 4032 95.3300 1611 4147 1 chr7A.!!$R1 2536
12 TraesCS1D01G320600 chrUn 70155161 70158593 3432 True 2668.5 3964 93.9650 630 4147 2 chrUn.!!$R1 3517
13 TraesCS1D01G320600 chrUn 97176296 97177999 1703 False 1906.0 1906 87.2550 2462 4147 1 chrUn.!!$F1 1685
14 TraesCS1D01G320600 chr4B 657802917 657805199 2282 True 3369.0 3369 93.3040 904 3192 1 chr4B.!!$R1 2288
15 TraesCS1D01G320600 chr6A 56126592 56128312 1720 True 2348.0 2348 91.6470 2457 4147 1 chr6A.!!$R1 1690
16 TraesCS1D01G320600 chr4D 375069356 375070479 1123 False 1886.0 1886 96.9780 628 1750 1 chr4D.!!$F1 1122
17 TraesCS1D01G320600 chr2B 80091647 80093087 1440 True 1539.0 1539 86.2230 2716 4147 1 chr2B.!!$R1 1431
18 TraesCS1D01G320600 chr2D 624287168 624288129 961 False 1426.0 1426 93.3950 630 1595 1 chr2D.!!$F1 965
19 TraesCS1D01G320600 chr1B 559333348 559333852 504 True 856.0 856 97.2330 125 630 1 chr1B.!!$R2 505
20 TraesCS1D01G320600 chr1B 537657867 537658372 505 True 830.0 830 96.2450 125 630 1 chr1B.!!$R1 505
21 TraesCS1D01G320600 chr1B 572991495 572992371 876 True 817.0 817 83.7600 630 1513 1 chr1B.!!$R3 883

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
412 413 0.036732 GTGGTCATCAAGCTCCACCA 59.963 55.000 8.48 3.89 42.90 4.17 F
486 487 0.038744 CAATCTCCACCAACTGCCCT 59.961 55.000 0.00 0.00 0.00 5.19 F
505 506 0.250234 TCCTGATGCCTCCTCAAACG 59.750 55.000 0.00 0.00 0.00 3.60 F
1497 1590 0.035056 AAGGCGTTTCTATGGCTGCT 60.035 50.000 0.00 0.00 44.69 4.24 F
2782 3200 3.104568 ACCCCCACCGTTTCCCAA 61.105 61.111 0.00 0.00 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1384 1477 1.000938 GCTCAAGTTGGCCACAGAAAG 60.001 52.381 3.88 1.55 0.00 2.62 R
1497 1590 1.951209 TGGCATCTAACCTGGACTGA 58.049 50.000 0.00 0.00 0.00 3.41 R
2332 2700 4.697352 ACATATCACAGCAAGTTGAAGACC 59.303 41.667 7.16 0.00 0.00 3.85 R
2878 3308 1.079336 CTCTGTGCTGCTGCTGCTA 60.079 57.895 27.67 17.43 40.48 3.49 R
3710 4296 2.936919 ACACCAGATCTTCAAGTGCA 57.063 45.000 10.41 0.00 31.58 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.559502 AACGGCTGTTCAGTGCTT 57.440 50.000 4.68 0.00 30.83 3.91
18 19 2.793831 AACGGCTGTTCAGTGCTTT 58.206 47.368 4.68 0.00 30.83 3.51
19 20 1.102978 AACGGCTGTTCAGTGCTTTT 58.897 45.000 4.68 0.00 30.83 2.27
20 21 1.102978 ACGGCTGTTCAGTGCTTTTT 58.897 45.000 0.00 0.00 0.00 1.94
21 22 1.202290 ACGGCTGTTCAGTGCTTTTTG 60.202 47.619 0.00 0.00 0.00 2.44
22 23 1.211743 GGCTGTTCAGTGCTTTTTGC 58.788 50.000 1.78 0.00 43.25 3.68
34 35 3.086818 GCTTTTTGCAACGGGTTAAGA 57.913 42.857 0.00 0.00 42.31 2.10
35 36 3.049912 GCTTTTTGCAACGGGTTAAGAG 58.950 45.455 0.00 0.00 42.31 2.85
36 37 3.243267 GCTTTTTGCAACGGGTTAAGAGA 60.243 43.478 0.00 0.00 42.31 3.10
37 38 4.558697 GCTTTTTGCAACGGGTTAAGAGAT 60.559 41.667 0.00 0.00 42.31 2.75
38 39 5.523438 TTTTTGCAACGGGTTAAGAGATT 57.477 34.783 0.00 0.00 0.00 2.40
39 40 5.523438 TTTTGCAACGGGTTAAGAGATTT 57.477 34.783 0.00 0.00 0.00 2.17
40 41 5.523438 TTTGCAACGGGTTAAGAGATTTT 57.477 34.783 0.00 0.00 0.00 1.82
41 42 6.636562 TTTGCAACGGGTTAAGAGATTTTA 57.363 33.333 0.00 0.00 0.00 1.52
42 43 6.827586 TTGCAACGGGTTAAGAGATTTTAT 57.172 33.333 0.00 0.00 0.00 1.40
43 44 6.189677 TGCAACGGGTTAAGAGATTTTATG 57.810 37.500 0.00 0.00 0.00 1.90
44 45 5.124776 TGCAACGGGTTAAGAGATTTTATGG 59.875 40.000 0.00 0.00 0.00 2.74
45 46 5.124936 GCAACGGGTTAAGAGATTTTATGGT 59.875 40.000 0.00 0.00 0.00 3.55
46 47 6.551736 CAACGGGTTAAGAGATTTTATGGTG 58.448 40.000 0.00 0.00 0.00 4.17
47 48 5.812286 ACGGGTTAAGAGATTTTATGGTGT 58.188 37.500 0.00 0.00 0.00 4.16
48 49 6.243148 ACGGGTTAAGAGATTTTATGGTGTT 58.757 36.000 0.00 0.00 0.00 3.32
49 50 6.717997 ACGGGTTAAGAGATTTTATGGTGTTT 59.282 34.615 0.00 0.00 0.00 2.83
50 51 7.231925 ACGGGTTAAGAGATTTTATGGTGTTTT 59.768 33.333 0.00 0.00 0.00 2.43
51 52 8.085909 CGGGTTAAGAGATTTTATGGTGTTTTT 58.914 33.333 0.00 0.00 0.00 1.94
72 73 7.630470 TTTTTGCAACATATTAACGACTTGG 57.370 32.000 0.00 0.00 0.00 3.61
73 74 5.950758 TTGCAACATATTAACGACTTGGT 57.049 34.783 0.00 0.00 0.00 3.67
74 75 7.436430 TTTGCAACATATTAACGACTTGGTA 57.564 32.000 0.00 0.00 0.00 3.25
75 76 6.656314 TGCAACATATTAACGACTTGGTAG 57.344 37.500 0.00 0.00 0.00 3.18
76 77 6.167685 TGCAACATATTAACGACTTGGTAGT 58.832 36.000 0.00 0.00 37.31 2.73
77 78 6.651643 TGCAACATATTAACGACTTGGTAGTT 59.348 34.615 0.00 2.29 35.70 2.24
78 79 7.173562 TGCAACATATTAACGACTTGGTAGTTT 59.826 33.333 0.00 0.00 33.77 2.66
79 80 7.691050 GCAACATATTAACGACTTGGTAGTTTC 59.309 37.037 0.00 0.00 33.77 2.78
80 81 7.838771 ACATATTAACGACTTGGTAGTTTCC 57.161 36.000 0.00 0.00 33.77 3.13
81 82 7.618137 ACATATTAACGACTTGGTAGTTTCCT 58.382 34.615 0.00 0.00 33.77 3.36
82 83 7.548075 ACATATTAACGACTTGGTAGTTTCCTG 59.452 37.037 0.00 0.21 33.77 3.86
83 84 2.165319 ACGACTTGGTAGTTTCCTGC 57.835 50.000 0.00 0.00 33.84 4.85
84 85 1.414919 ACGACTTGGTAGTTTCCTGCA 59.585 47.619 0.00 0.00 33.84 4.41
85 86 2.158871 ACGACTTGGTAGTTTCCTGCAA 60.159 45.455 0.00 0.00 33.84 4.08
86 87 2.875933 CGACTTGGTAGTTTCCTGCAAA 59.124 45.455 0.00 0.00 33.84 3.68
87 88 3.303791 CGACTTGGTAGTTTCCTGCAAAC 60.304 47.826 0.00 0.00 44.38 2.93
88 89 2.956333 ACTTGGTAGTTTCCTGCAAACC 59.044 45.455 0.00 0.00 45.05 3.27
89 90 3.222603 CTTGGTAGTTTCCTGCAAACCT 58.777 45.455 0.00 0.00 45.05 3.50
90 91 4.141344 ACTTGGTAGTTTCCTGCAAACCTA 60.141 41.667 0.00 0.00 45.05 3.08
91 92 4.015872 TGGTAGTTTCCTGCAAACCTAG 57.984 45.455 0.00 0.00 45.05 3.02
92 93 2.747989 GGTAGTTTCCTGCAAACCTAGC 59.252 50.000 0.00 0.00 45.05 3.42
93 94 1.911057 AGTTTCCTGCAAACCTAGCC 58.089 50.000 0.00 0.00 45.05 3.93
94 95 1.144913 AGTTTCCTGCAAACCTAGCCA 59.855 47.619 0.00 0.00 45.05 4.75
95 96 1.269723 GTTTCCTGCAAACCTAGCCAC 59.730 52.381 0.00 0.00 38.86 5.01
96 97 0.476338 TTCCTGCAAACCTAGCCACA 59.524 50.000 0.00 0.00 0.00 4.17
97 98 0.476338 TCCTGCAAACCTAGCCACAA 59.524 50.000 0.00 0.00 0.00 3.33
98 99 1.133637 TCCTGCAAACCTAGCCACAAA 60.134 47.619 0.00 0.00 0.00 2.83
99 100 1.895131 CCTGCAAACCTAGCCACAAAT 59.105 47.619 0.00 0.00 0.00 2.32
100 101 2.353011 CCTGCAAACCTAGCCACAAATG 60.353 50.000 0.00 0.00 0.00 2.32
101 102 2.297033 CTGCAAACCTAGCCACAAATGT 59.703 45.455 0.00 0.00 0.00 2.71
102 103 2.035704 TGCAAACCTAGCCACAAATGTG 59.964 45.455 6.57 6.57 45.23 3.21
114 115 2.865551 CACAAATGTGGTGGTTTCTTGC 59.134 45.455 5.63 0.00 42.10 4.01
115 116 2.499289 ACAAATGTGGTGGTTTCTTGCA 59.501 40.909 0.00 0.00 0.00 4.08
116 117 3.055530 ACAAATGTGGTGGTTTCTTGCAA 60.056 39.130 0.00 0.00 0.00 4.08
117 118 4.128643 CAAATGTGGTGGTTTCTTGCAAT 58.871 39.130 0.00 0.00 0.00 3.56
118 119 4.420522 AATGTGGTGGTTTCTTGCAATT 57.579 36.364 0.00 0.00 0.00 2.32
119 120 3.176552 TGTGGTGGTTTCTTGCAATTG 57.823 42.857 0.00 0.00 0.00 2.32
120 121 2.762887 TGTGGTGGTTTCTTGCAATTGA 59.237 40.909 10.34 0.00 0.00 2.57
121 122 3.123050 GTGGTGGTTTCTTGCAATTGAC 58.877 45.455 10.34 1.02 0.00 3.18
122 123 3.030291 TGGTGGTTTCTTGCAATTGACT 58.970 40.909 10.34 0.00 0.00 3.41
123 124 3.068024 TGGTGGTTTCTTGCAATTGACTC 59.932 43.478 10.34 0.00 0.00 3.36
137 138 5.159209 CAATTGACTCCTGATTGCAAGAAC 58.841 41.667 4.94 0.00 0.00 3.01
151 152 2.031944 GCAAGAACGGTTTCCAGAGTTC 60.032 50.000 0.00 0.00 42.17 3.01
152 153 2.545537 AGAACGGTTTCCAGAGTTCC 57.454 50.000 0.00 0.00 42.66 3.62
153 154 1.766496 AGAACGGTTTCCAGAGTTCCA 59.234 47.619 0.00 0.00 42.66 3.53
154 155 2.143925 GAACGGTTTCCAGAGTTCCAG 58.856 52.381 0.00 0.00 37.57 3.86
155 156 1.420430 ACGGTTTCCAGAGTTCCAGA 58.580 50.000 0.00 0.00 0.00 3.86
156 157 1.978580 ACGGTTTCCAGAGTTCCAGAT 59.021 47.619 0.00 0.00 0.00 2.90
157 158 3.170717 ACGGTTTCCAGAGTTCCAGATA 58.829 45.455 0.00 0.00 0.00 1.98
158 159 3.056035 ACGGTTTCCAGAGTTCCAGATAC 60.056 47.826 0.00 0.00 0.00 2.24
159 160 3.195825 CGGTTTCCAGAGTTCCAGATACT 59.804 47.826 0.00 0.00 0.00 2.12
160 161 4.508662 GGTTTCCAGAGTTCCAGATACTG 58.491 47.826 0.00 0.00 0.00 2.74
175 176 6.918067 CAGATACTGGGTCATAGGTAATCA 57.082 41.667 0.00 0.00 0.00 2.57
176 177 6.692486 CAGATACTGGGTCATAGGTAATCAC 58.308 44.000 0.00 0.00 0.00 3.06
177 178 5.780793 AGATACTGGGTCATAGGTAATCACC 59.219 44.000 0.00 0.00 46.19 4.02
187 188 2.629639 GGTAATCACCTTGCGTTTGG 57.370 50.000 0.00 0.00 42.11 3.28
188 189 2.156098 GGTAATCACCTTGCGTTTGGA 58.844 47.619 0.00 0.00 42.11 3.53
189 190 2.752903 GGTAATCACCTTGCGTTTGGAT 59.247 45.455 0.00 0.00 42.11 3.41
190 191 3.427503 GGTAATCACCTTGCGTTTGGATG 60.428 47.826 0.00 0.00 42.11 3.51
191 192 1.909700 ATCACCTTGCGTTTGGATGT 58.090 45.000 0.00 0.00 0.00 3.06
192 193 2.552599 TCACCTTGCGTTTGGATGTA 57.447 45.000 0.00 0.00 0.00 2.29
193 194 2.422597 TCACCTTGCGTTTGGATGTAG 58.577 47.619 0.00 0.00 0.00 2.74
194 195 1.135689 CACCTTGCGTTTGGATGTAGC 60.136 52.381 0.00 0.00 0.00 3.58
195 196 0.451783 CCTTGCGTTTGGATGTAGCC 59.548 55.000 0.00 0.00 0.00 3.93
196 197 1.164411 CTTGCGTTTGGATGTAGCCA 58.836 50.000 0.00 0.00 35.78 4.75
197 198 1.539388 CTTGCGTTTGGATGTAGCCAA 59.461 47.619 0.00 0.00 45.77 4.52
206 207 5.450818 TTGGATGTAGCCAAGATTACCTT 57.549 39.130 0.00 0.00 42.75 3.50
218 219 6.442513 CAAGATTACCTTGTTCCTTGATCC 57.557 41.667 0.00 0.00 45.52 3.36
219 220 5.779241 AGATTACCTTGTTCCTTGATCCA 57.221 39.130 0.00 0.00 0.00 3.41
220 221 5.501156 AGATTACCTTGTTCCTTGATCCAC 58.499 41.667 0.00 0.00 0.00 4.02
221 222 4.715534 TTACCTTGTTCCTTGATCCACA 57.284 40.909 0.00 0.00 0.00 4.17
222 223 3.593442 ACCTTGTTCCTTGATCCACAA 57.407 42.857 0.00 0.00 36.97 3.33
223 224 4.118168 ACCTTGTTCCTTGATCCACAAT 57.882 40.909 0.00 0.00 37.88 2.71
224 225 4.482990 ACCTTGTTCCTTGATCCACAATT 58.517 39.130 0.00 0.00 37.88 2.32
225 226 4.281688 ACCTTGTTCCTTGATCCACAATTG 59.718 41.667 3.24 3.24 37.88 2.32
226 227 3.940209 TGTTCCTTGATCCACAATTGC 57.060 42.857 5.05 0.00 37.88 3.56
227 228 2.562298 TGTTCCTTGATCCACAATTGCC 59.438 45.455 5.05 0.00 37.88 4.52
228 229 2.562298 GTTCCTTGATCCACAATTGCCA 59.438 45.455 5.05 0.00 37.88 4.92
229 230 2.886913 TCCTTGATCCACAATTGCCAA 58.113 42.857 5.05 2.05 37.88 4.52
230 231 2.562298 TCCTTGATCCACAATTGCCAAC 59.438 45.455 5.05 0.00 37.88 3.77
231 232 2.299582 CCTTGATCCACAATTGCCAACA 59.700 45.455 5.05 0.00 37.88 3.33
232 233 3.581755 CTTGATCCACAATTGCCAACAG 58.418 45.455 5.05 0.00 37.88 3.16
233 234 2.874014 TGATCCACAATTGCCAACAGA 58.126 42.857 5.05 0.00 0.00 3.41
234 235 3.229293 TGATCCACAATTGCCAACAGAA 58.771 40.909 5.05 0.00 0.00 3.02
235 236 3.005684 TGATCCACAATTGCCAACAGAAC 59.994 43.478 5.05 0.00 0.00 3.01
236 237 1.686052 TCCACAATTGCCAACAGAACC 59.314 47.619 5.05 0.00 0.00 3.62
237 238 1.411977 CCACAATTGCCAACAGAACCA 59.588 47.619 5.05 0.00 0.00 3.67
238 239 2.158986 CCACAATTGCCAACAGAACCAA 60.159 45.455 5.05 0.00 0.00 3.67
239 240 3.494749 CCACAATTGCCAACAGAACCAAT 60.495 43.478 5.05 0.00 0.00 3.16
240 241 3.495377 CACAATTGCCAACAGAACCAATG 59.505 43.478 5.05 0.00 0.00 2.82
241 242 3.387374 ACAATTGCCAACAGAACCAATGA 59.613 39.130 5.05 0.00 0.00 2.57
242 243 3.665745 ATTGCCAACAGAACCAATGAC 57.334 42.857 0.00 0.00 0.00 3.06
243 244 2.363306 TGCCAACAGAACCAATGACT 57.637 45.000 0.00 0.00 0.00 3.41
244 245 2.229792 TGCCAACAGAACCAATGACTC 58.770 47.619 0.00 0.00 0.00 3.36
245 246 2.158623 TGCCAACAGAACCAATGACTCT 60.159 45.455 0.00 0.00 0.00 3.24
246 247 3.072330 TGCCAACAGAACCAATGACTCTA 59.928 43.478 0.00 0.00 0.00 2.43
247 248 4.072131 GCCAACAGAACCAATGACTCTAA 58.928 43.478 0.00 0.00 0.00 2.10
248 249 4.702131 GCCAACAGAACCAATGACTCTAAT 59.298 41.667 0.00 0.00 0.00 1.73
249 250 5.880332 GCCAACAGAACCAATGACTCTAATA 59.120 40.000 0.00 0.00 0.00 0.98
250 251 6.374333 GCCAACAGAACCAATGACTCTAATAA 59.626 38.462 0.00 0.00 0.00 1.40
251 252 7.067494 GCCAACAGAACCAATGACTCTAATAAT 59.933 37.037 0.00 0.00 0.00 1.28
252 253 8.960591 CCAACAGAACCAATGACTCTAATAATT 58.039 33.333 0.00 0.00 0.00 1.40
255 256 8.462016 ACAGAACCAATGACTCTAATAATTTGC 58.538 33.333 0.00 0.00 0.00 3.68
256 257 7.641411 CAGAACCAATGACTCTAATAATTTGCG 59.359 37.037 0.00 0.00 0.00 4.85
257 258 6.377327 ACCAATGACTCTAATAATTTGCGG 57.623 37.500 0.00 0.00 0.00 5.69
258 259 5.215160 CCAATGACTCTAATAATTTGCGGC 58.785 41.667 0.00 0.00 0.00 6.53
259 260 5.009010 CCAATGACTCTAATAATTTGCGGCT 59.991 40.000 0.00 0.00 0.00 5.52
260 261 5.931441 ATGACTCTAATAATTTGCGGCTC 57.069 39.130 0.00 0.00 0.00 4.70
261 262 4.127171 TGACTCTAATAATTTGCGGCTCC 58.873 43.478 0.00 0.00 0.00 4.70
262 263 4.127171 GACTCTAATAATTTGCGGCTCCA 58.873 43.478 0.00 0.00 0.00 3.86
263 264 4.718961 ACTCTAATAATTTGCGGCTCCAT 58.281 39.130 0.00 0.00 0.00 3.41
264 265 4.757149 ACTCTAATAATTTGCGGCTCCATC 59.243 41.667 0.00 0.00 0.00 3.51
265 266 4.713553 TCTAATAATTTGCGGCTCCATCA 58.286 39.130 0.00 0.00 0.00 3.07
266 267 5.129634 TCTAATAATTTGCGGCTCCATCAA 58.870 37.500 0.00 0.00 0.00 2.57
267 268 4.734398 AATAATTTGCGGCTCCATCAAA 57.266 36.364 0.00 6.02 34.68 2.69
268 269 2.368655 AATTTGCGGCTCCATCAAAC 57.631 45.000 0.00 0.00 33.24 2.93
269 270 0.532115 ATTTGCGGCTCCATCAAACC 59.468 50.000 0.00 0.00 33.24 3.27
270 271 0.539438 TTTGCGGCTCCATCAAACCT 60.539 50.000 0.00 0.00 0.00 3.50
271 272 0.960364 TTGCGGCTCCATCAAACCTC 60.960 55.000 0.00 0.00 0.00 3.85
272 273 1.078143 GCGGCTCCATCAAACCTCT 60.078 57.895 0.00 0.00 0.00 3.69
273 274 0.678048 GCGGCTCCATCAAACCTCTT 60.678 55.000 0.00 0.00 0.00 2.85
274 275 1.826385 CGGCTCCATCAAACCTCTTT 58.174 50.000 0.00 0.00 0.00 2.52
275 276 1.470098 CGGCTCCATCAAACCTCTTTG 59.530 52.381 0.00 0.00 38.56 2.77
277 278 3.157087 GGCTCCATCAAACCTCTTTGAA 58.843 45.455 0.25 0.00 46.99 2.69
278 279 3.057245 GGCTCCATCAAACCTCTTTGAAC 60.057 47.826 0.25 0.00 46.99 3.18
279 280 3.569701 GCTCCATCAAACCTCTTTGAACA 59.430 43.478 0.25 0.00 46.99 3.18
280 281 4.219288 GCTCCATCAAACCTCTTTGAACAT 59.781 41.667 0.25 0.00 46.99 2.71
281 282 5.706916 CTCCATCAAACCTCTTTGAACATG 58.293 41.667 0.25 0.00 46.99 3.21
282 283 5.139727 TCCATCAAACCTCTTTGAACATGT 58.860 37.500 0.00 0.00 46.99 3.21
283 284 5.598005 TCCATCAAACCTCTTTGAACATGTT 59.402 36.000 11.78 11.78 46.99 2.71
284 285 5.693104 CCATCAAACCTCTTTGAACATGTTG 59.307 40.000 17.58 1.06 46.99 3.33
285 286 5.913137 TCAAACCTCTTTGAACATGTTGT 57.087 34.783 17.58 2.48 42.34 3.32
286 287 7.424803 CATCAAACCTCTTTGAACATGTTGTA 58.575 34.615 17.58 1.54 46.99 2.41
287 288 7.397892 TCAAACCTCTTTGAACATGTTGTAA 57.602 32.000 17.58 8.26 42.34 2.41
288 289 7.254852 TCAAACCTCTTTGAACATGTTGTAAC 58.745 34.615 17.58 1.54 42.34 2.50
289 290 6.767524 AACCTCTTTGAACATGTTGTAACA 57.232 33.333 17.58 4.57 44.06 2.41
290 291 6.767524 ACCTCTTTGAACATGTTGTAACAA 57.232 33.333 17.58 10.94 43.03 2.83
291 292 7.164230 ACCTCTTTGAACATGTTGTAACAAA 57.836 32.000 17.58 17.43 43.03 2.83
292 293 7.781056 ACCTCTTTGAACATGTTGTAACAAAT 58.219 30.769 17.58 2.61 43.03 2.32
293 294 7.920682 ACCTCTTTGAACATGTTGTAACAAATC 59.079 33.333 17.58 0.00 43.03 2.17
294 295 7.920151 CCTCTTTGAACATGTTGTAACAAATCA 59.080 33.333 17.58 0.93 43.03 2.57
295 296 9.299963 CTCTTTGAACATGTTGTAACAAATCAA 57.700 29.630 17.58 7.75 43.03 2.57
296 297 9.814899 TCTTTGAACATGTTGTAACAAATCAAT 57.185 25.926 17.58 0.00 43.03 2.57
297 298 9.852481 CTTTGAACATGTTGTAACAAATCAATG 57.148 29.630 17.58 8.86 43.03 2.82
298 299 7.405469 TGAACATGTTGTAACAAATCAATGC 57.595 32.000 17.58 0.00 43.03 3.56
299 300 6.423302 TGAACATGTTGTAACAAATCAATGCC 59.577 34.615 17.58 0.00 43.03 4.40
300 301 5.851720 ACATGTTGTAACAAATCAATGCCA 58.148 33.333 1.10 0.00 43.03 4.92
301 302 6.465948 ACATGTTGTAACAAATCAATGCCAT 58.534 32.000 1.10 0.00 43.03 4.40
302 303 6.369340 ACATGTTGTAACAAATCAATGCCATG 59.631 34.615 1.10 2.42 43.03 3.66
303 304 5.851720 TGTTGTAACAAATCAATGCCATGT 58.148 33.333 0.00 0.00 35.67 3.21
304 305 5.695363 TGTTGTAACAAATCAATGCCATGTG 59.305 36.000 0.00 0.00 35.67 3.21
305 306 4.244066 TGTAACAAATCAATGCCATGTGC 58.756 39.130 0.00 0.00 41.77 4.57
306 307 2.389962 ACAAATCAATGCCATGTGCC 57.610 45.000 4.07 0.00 40.16 5.01
307 308 1.624312 ACAAATCAATGCCATGTGCCA 59.376 42.857 4.07 0.00 40.16 4.92
308 309 2.038689 ACAAATCAATGCCATGTGCCAA 59.961 40.909 4.07 0.00 40.16 4.52
309 310 2.389962 AATCAATGCCATGTGCCAAC 57.610 45.000 4.07 0.00 40.16 3.77
310 311 0.173935 ATCAATGCCATGTGCCAACG 59.826 50.000 4.07 0.00 40.16 4.10
311 312 1.177895 TCAATGCCATGTGCCAACGT 61.178 50.000 4.07 0.00 40.16 3.99
312 313 0.733566 CAATGCCATGTGCCAACGTC 60.734 55.000 0.00 0.00 40.16 4.34
313 314 1.876497 AATGCCATGTGCCAACGTCC 61.876 55.000 0.00 0.00 40.16 4.79
314 315 2.983030 GCCATGTGCCAACGTCCA 60.983 61.111 0.00 0.00 0.00 4.02
315 316 2.560119 GCCATGTGCCAACGTCCAA 61.560 57.895 0.00 0.00 0.00 3.53
316 317 1.876497 GCCATGTGCCAACGTCCAAT 61.876 55.000 0.00 0.00 0.00 3.16
317 318 0.171007 CCATGTGCCAACGTCCAATC 59.829 55.000 0.00 0.00 0.00 2.67
318 319 0.880441 CATGTGCCAACGTCCAATCA 59.120 50.000 0.00 0.00 0.00 2.57
319 320 0.881118 ATGTGCCAACGTCCAATCAC 59.119 50.000 0.00 0.00 0.00 3.06
320 321 1.169661 TGTGCCAACGTCCAATCACC 61.170 55.000 0.00 0.00 0.00 4.02
321 322 1.149401 TGCCAACGTCCAATCACCA 59.851 52.632 0.00 0.00 0.00 4.17
322 323 0.888736 TGCCAACGTCCAATCACCAG 60.889 55.000 0.00 0.00 0.00 4.00
323 324 0.605319 GCCAACGTCCAATCACCAGA 60.605 55.000 0.00 0.00 0.00 3.86
324 325 1.442769 CCAACGTCCAATCACCAGAG 58.557 55.000 0.00 0.00 0.00 3.35
325 326 1.270839 CCAACGTCCAATCACCAGAGT 60.271 52.381 0.00 0.00 0.00 3.24
326 327 2.494059 CAACGTCCAATCACCAGAGTT 58.506 47.619 0.00 0.00 0.00 3.01
327 328 3.556213 CCAACGTCCAATCACCAGAGTTA 60.556 47.826 0.00 0.00 0.00 2.24
328 329 3.314541 ACGTCCAATCACCAGAGTTAC 57.685 47.619 0.00 0.00 0.00 2.50
329 330 2.631062 ACGTCCAATCACCAGAGTTACA 59.369 45.455 0.00 0.00 0.00 2.41
330 331 3.254060 CGTCCAATCACCAGAGTTACAG 58.746 50.000 0.00 0.00 0.00 2.74
331 332 3.306088 CGTCCAATCACCAGAGTTACAGT 60.306 47.826 0.00 0.00 0.00 3.55
332 333 4.246458 GTCCAATCACCAGAGTTACAGTC 58.754 47.826 0.00 0.00 0.00 3.51
333 334 3.260884 TCCAATCACCAGAGTTACAGTCC 59.739 47.826 0.00 0.00 0.00 3.85
334 335 3.261897 CCAATCACCAGAGTTACAGTCCT 59.738 47.826 0.00 0.00 0.00 3.85
335 336 4.248859 CAATCACCAGAGTTACAGTCCTG 58.751 47.826 0.00 0.00 0.00 3.86
336 337 1.618837 TCACCAGAGTTACAGTCCTGC 59.381 52.381 0.00 0.00 0.00 4.85
337 338 1.344438 CACCAGAGTTACAGTCCTGCA 59.656 52.381 0.00 0.00 0.00 4.41
338 339 2.027745 CACCAGAGTTACAGTCCTGCAT 60.028 50.000 0.00 0.00 0.00 3.96
339 340 2.639839 ACCAGAGTTACAGTCCTGCATT 59.360 45.455 0.00 0.00 0.00 3.56
340 341 3.073062 ACCAGAGTTACAGTCCTGCATTT 59.927 43.478 0.00 0.00 0.00 2.32
341 342 3.686726 CCAGAGTTACAGTCCTGCATTTC 59.313 47.826 0.00 0.00 0.00 2.17
342 343 3.686726 CAGAGTTACAGTCCTGCATTTCC 59.313 47.826 0.00 0.00 0.00 3.13
343 344 3.010420 GAGTTACAGTCCTGCATTTCCC 58.990 50.000 0.00 0.00 0.00 3.97
344 345 2.375174 AGTTACAGTCCTGCATTTCCCA 59.625 45.455 0.00 0.00 0.00 4.37
345 346 3.153919 GTTACAGTCCTGCATTTCCCAA 58.846 45.455 0.00 0.00 0.00 4.12
346 347 2.380064 ACAGTCCTGCATTTCCCAAA 57.620 45.000 0.00 0.00 0.00 3.28
347 348 2.893424 ACAGTCCTGCATTTCCCAAAT 58.107 42.857 0.00 0.00 0.00 2.32
348 349 4.046286 ACAGTCCTGCATTTCCCAAATA 57.954 40.909 0.00 0.00 0.00 1.40
349 350 4.613437 ACAGTCCTGCATTTCCCAAATAT 58.387 39.130 0.00 0.00 0.00 1.28
350 351 4.646492 ACAGTCCTGCATTTCCCAAATATC 59.354 41.667 0.00 0.00 0.00 1.63
351 352 4.038402 CAGTCCTGCATTTCCCAAATATCC 59.962 45.833 0.00 0.00 0.00 2.59
352 353 3.960102 GTCCTGCATTTCCCAAATATCCA 59.040 43.478 0.00 0.00 0.00 3.41
353 354 4.590222 GTCCTGCATTTCCCAAATATCCAT 59.410 41.667 0.00 0.00 0.00 3.41
354 355 5.774690 GTCCTGCATTTCCCAAATATCCATA 59.225 40.000 0.00 0.00 0.00 2.74
355 356 6.267471 GTCCTGCATTTCCCAAATATCCATAA 59.733 38.462 0.00 0.00 0.00 1.90
356 357 7.018150 TCCTGCATTTCCCAAATATCCATAAT 58.982 34.615 0.00 0.00 0.00 1.28
357 358 8.176105 TCCTGCATTTCCCAAATATCCATAATA 58.824 33.333 0.00 0.00 0.00 0.98
358 359 8.253113 CCTGCATTTCCCAAATATCCATAATAC 58.747 37.037 0.00 0.00 0.00 1.89
359 360 8.954834 TGCATTTCCCAAATATCCATAATACT 57.045 30.769 0.00 0.00 0.00 2.12
372 373 7.883391 ATCCATAATACTAGTATCAGGACGG 57.117 40.000 22.85 15.17 0.00 4.79
373 374 7.024345 TCCATAATACTAGTATCAGGACGGA 57.976 40.000 15.72 12.34 0.00 4.69
374 375 7.110810 TCCATAATACTAGTATCAGGACGGAG 58.889 42.308 15.72 0.00 0.00 4.63
375 376 6.319152 CCATAATACTAGTATCAGGACGGAGG 59.681 46.154 15.72 4.97 0.00 4.30
376 377 4.997545 ATACTAGTATCAGGACGGAGGT 57.002 45.455 9.71 0.00 0.00 3.85
377 378 3.211718 ACTAGTATCAGGACGGAGGTC 57.788 52.381 0.00 0.00 42.66 3.85
393 394 3.453559 GTCCCGGACCATACACAAG 57.546 57.895 0.73 0.00 0.00 3.16
394 395 0.611714 GTCCCGGACCATACACAAGT 59.388 55.000 0.73 0.00 0.00 3.16
395 396 0.611200 TCCCGGACCATACACAAGTG 59.389 55.000 0.73 0.00 0.00 3.16
396 397 0.392461 CCCGGACCATACACAAGTGG 60.392 60.000 0.73 0.00 41.35 4.00
403 404 4.365514 ACCATACACAAGTGGTCATCAA 57.634 40.909 5.08 0.00 45.30 2.57
404 405 4.326826 ACCATACACAAGTGGTCATCAAG 58.673 43.478 5.08 0.00 45.30 3.02
405 406 3.127548 CCATACACAAGTGGTCATCAAGC 59.872 47.826 5.08 0.00 34.19 4.01
406 407 2.645838 ACACAAGTGGTCATCAAGCT 57.354 45.000 5.08 0.00 34.19 3.74
407 408 2.498167 ACACAAGTGGTCATCAAGCTC 58.502 47.619 5.08 0.00 34.19 4.09
408 409 1.808945 CACAAGTGGTCATCAAGCTCC 59.191 52.381 0.00 0.00 0.00 4.70
409 410 1.421268 ACAAGTGGTCATCAAGCTCCA 59.579 47.619 0.00 0.00 0.00 3.86
411 412 2.859992 GTGGTCATCAAGCTCCACC 58.140 57.895 8.48 1.47 42.90 4.61
412 413 0.036732 GTGGTCATCAAGCTCCACCA 59.963 55.000 8.48 3.89 42.90 4.17
413 414 0.325933 TGGTCATCAAGCTCCACCAG 59.674 55.000 0.00 0.00 31.99 4.00
414 415 0.393537 GGTCATCAAGCTCCACCAGG 60.394 60.000 0.00 0.00 0.00 4.45
415 416 0.326264 GTCATCAAGCTCCACCAGGT 59.674 55.000 0.00 0.00 35.89 4.00
416 417 0.325933 TCATCAAGCTCCACCAGGTG 59.674 55.000 13.35 13.35 35.89 4.00
422 423 2.348998 CTCCACCAGGTGCACTCC 59.651 66.667 17.98 0.00 35.89 3.85
423 424 2.122413 TCCACCAGGTGCACTCCT 60.122 61.111 17.98 2.87 38.51 3.69
429 430 3.161557 AGGTGCACTCCTGGAACC 58.838 61.111 17.98 7.12 36.35 3.62
430 431 1.462238 AGGTGCACTCCTGGAACCT 60.462 57.895 17.98 11.27 36.35 3.50
431 432 1.003233 GGTGCACTCCTGGAACCTC 60.003 63.158 17.98 0.00 0.00 3.85
432 433 1.374758 GTGCACTCCTGGAACCTCG 60.375 63.158 10.32 0.00 0.00 4.63
433 434 1.533033 TGCACTCCTGGAACCTCGA 60.533 57.895 0.00 0.00 0.00 4.04
434 435 1.118965 TGCACTCCTGGAACCTCGAA 61.119 55.000 0.00 0.00 0.00 3.71
435 436 0.390472 GCACTCCTGGAACCTCGAAG 60.390 60.000 0.00 0.00 0.00 3.79
436 437 1.257743 CACTCCTGGAACCTCGAAGA 58.742 55.000 0.00 0.00 0.00 2.87
437 438 1.827969 CACTCCTGGAACCTCGAAGAT 59.172 52.381 0.00 0.00 33.89 2.40
438 439 2.234908 CACTCCTGGAACCTCGAAGATT 59.765 50.000 0.00 0.00 33.89 2.40
439 440 2.234908 ACTCCTGGAACCTCGAAGATTG 59.765 50.000 0.00 0.00 33.89 2.67
440 441 1.555075 TCCTGGAACCTCGAAGATTGG 59.445 52.381 0.00 0.00 33.89 3.16
441 442 1.279271 CCTGGAACCTCGAAGATTGGT 59.721 52.381 0.00 0.00 36.59 3.67
442 443 2.350522 CTGGAACCTCGAAGATTGGTG 58.649 52.381 0.00 0.00 35.15 4.17
443 444 1.003118 TGGAACCTCGAAGATTGGTGG 59.997 52.381 0.00 0.00 35.15 4.61
444 445 1.087501 GAACCTCGAAGATTGGTGGC 58.912 55.000 0.00 0.00 35.15 5.01
445 446 0.322546 AACCTCGAAGATTGGTGGCC 60.323 55.000 0.00 0.00 35.15 5.36
446 447 1.815421 CCTCGAAGATTGGTGGCCG 60.815 63.158 0.00 0.00 33.89 6.13
447 448 1.815421 CTCGAAGATTGGTGGCCGG 60.815 63.158 0.00 0.00 33.89 6.13
448 449 2.238847 CTCGAAGATTGGTGGCCGGA 62.239 60.000 5.05 0.00 33.89 5.14
449 450 1.153168 CGAAGATTGGTGGCCGGAT 60.153 57.895 5.05 0.00 0.00 4.18
450 451 1.160329 CGAAGATTGGTGGCCGGATC 61.160 60.000 5.05 0.00 0.00 3.36
451 452 0.107214 GAAGATTGGTGGCCGGATCA 60.107 55.000 5.05 0.00 0.00 2.92
452 453 0.552848 AAGATTGGTGGCCGGATCAT 59.447 50.000 5.05 0.00 0.00 2.45
453 454 1.434188 AGATTGGTGGCCGGATCATA 58.566 50.000 5.05 0.00 0.00 2.15
454 455 1.072331 AGATTGGTGGCCGGATCATAC 59.928 52.381 5.05 0.83 0.00 2.39
455 456 0.843309 ATTGGTGGCCGGATCATACA 59.157 50.000 5.05 3.61 0.00 2.29
456 457 0.107410 TTGGTGGCCGGATCATACAC 60.107 55.000 5.05 3.36 0.00 2.90
457 458 1.268283 TGGTGGCCGGATCATACACA 61.268 55.000 5.05 0.00 33.91 3.72
458 459 0.108585 GGTGGCCGGATCATACACAT 59.891 55.000 5.05 0.00 33.91 3.21
459 460 1.229428 GTGGCCGGATCATACACATG 58.771 55.000 5.05 0.00 32.58 3.21
460 461 0.836606 TGGCCGGATCATACACATGT 59.163 50.000 5.05 0.00 33.57 3.21
461 462 1.229428 GGCCGGATCATACACATGTG 58.771 55.000 24.25 24.25 33.57 3.21
462 463 0.588252 GCCGGATCATACACATGTGC 59.412 55.000 25.68 8.01 33.57 4.57
463 464 1.811558 GCCGGATCATACACATGTGCT 60.812 52.381 25.68 14.82 33.57 4.40
464 465 2.138320 CCGGATCATACACATGTGCTC 58.862 52.381 25.68 13.61 33.57 4.26
465 466 2.483538 CCGGATCATACACATGTGCTCA 60.484 50.000 25.68 11.56 33.57 4.26
466 467 2.798847 CGGATCATACACATGTGCTCAG 59.201 50.000 25.68 13.01 33.57 3.35
467 468 2.547211 GGATCATACACATGTGCTCAGC 59.453 50.000 25.68 9.76 33.57 4.26
468 469 2.766345 TCATACACATGTGCTCAGCA 57.234 45.000 25.68 0.00 35.60 4.41
469 470 3.056588 TCATACACATGTGCTCAGCAA 57.943 42.857 25.68 2.43 41.47 3.91
470 471 3.613030 TCATACACATGTGCTCAGCAAT 58.387 40.909 25.68 6.16 41.47 3.56
471 472 3.624410 TCATACACATGTGCTCAGCAATC 59.376 43.478 25.68 0.00 41.47 2.67
472 473 2.195741 ACACATGTGCTCAGCAATCT 57.804 45.000 25.68 0.00 41.47 2.40
473 474 2.082231 ACACATGTGCTCAGCAATCTC 58.918 47.619 25.68 0.00 41.47 2.75
474 475 1.400846 CACATGTGCTCAGCAATCTCC 59.599 52.381 13.94 0.00 41.47 3.71
475 476 1.003928 ACATGTGCTCAGCAATCTCCA 59.996 47.619 0.00 0.00 41.47 3.86
476 477 1.400846 CATGTGCTCAGCAATCTCCAC 59.599 52.381 0.00 0.00 41.47 4.02
477 478 0.321919 TGTGCTCAGCAATCTCCACC 60.322 55.000 0.00 0.00 41.47 4.61
478 479 0.321919 GTGCTCAGCAATCTCCACCA 60.322 55.000 0.00 0.00 41.47 4.17
479 480 0.401356 TGCTCAGCAATCTCCACCAA 59.599 50.000 0.00 0.00 34.76 3.67
480 481 0.807496 GCTCAGCAATCTCCACCAAC 59.193 55.000 0.00 0.00 0.00 3.77
481 482 1.612726 GCTCAGCAATCTCCACCAACT 60.613 52.381 0.00 0.00 0.00 3.16
482 483 2.082231 CTCAGCAATCTCCACCAACTG 58.918 52.381 0.00 0.00 0.00 3.16
483 484 0.524862 CAGCAATCTCCACCAACTGC 59.475 55.000 0.00 0.00 0.00 4.40
484 485 0.610232 AGCAATCTCCACCAACTGCC 60.610 55.000 0.00 0.00 0.00 4.85
485 486 1.598701 GCAATCTCCACCAACTGCCC 61.599 60.000 0.00 0.00 0.00 5.36
486 487 0.038744 CAATCTCCACCAACTGCCCT 59.961 55.000 0.00 0.00 0.00 5.19
487 488 0.329596 AATCTCCACCAACTGCCCTC 59.670 55.000 0.00 0.00 0.00 4.30
488 489 1.566298 ATCTCCACCAACTGCCCTCC 61.566 60.000 0.00 0.00 0.00 4.30
489 490 2.121963 TCCACCAACTGCCCTCCT 60.122 61.111 0.00 0.00 0.00 3.69
490 491 2.034687 CCACCAACTGCCCTCCTG 59.965 66.667 0.00 0.00 0.00 3.86
491 492 2.528818 CCACCAACTGCCCTCCTGA 61.529 63.158 0.00 0.00 0.00 3.86
492 493 1.687612 CACCAACTGCCCTCCTGAT 59.312 57.895 0.00 0.00 0.00 2.90
493 494 0.679002 CACCAACTGCCCTCCTGATG 60.679 60.000 0.00 0.00 0.00 3.07
494 495 1.751927 CCAACTGCCCTCCTGATGC 60.752 63.158 0.00 0.00 0.00 3.91
495 496 1.751927 CAACTGCCCTCCTGATGCC 60.752 63.158 0.00 0.00 0.00 4.40
496 497 1.927527 AACTGCCCTCCTGATGCCT 60.928 57.895 0.00 0.00 0.00 4.75
497 498 1.919600 AACTGCCCTCCTGATGCCTC 61.920 60.000 0.00 0.00 0.00 4.70
498 499 3.092511 TGCCCTCCTGATGCCTCC 61.093 66.667 0.00 0.00 0.00 4.30
499 500 2.771762 GCCCTCCTGATGCCTCCT 60.772 66.667 0.00 0.00 0.00 3.69
500 501 2.817056 GCCCTCCTGATGCCTCCTC 61.817 68.421 0.00 0.00 0.00 3.71
501 502 1.383664 CCCTCCTGATGCCTCCTCA 60.384 63.158 0.00 0.00 0.00 3.86
502 503 0.984961 CCCTCCTGATGCCTCCTCAA 60.985 60.000 0.00 0.00 0.00 3.02
503 504 0.914644 CCTCCTGATGCCTCCTCAAA 59.085 55.000 0.00 0.00 0.00 2.69
504 505 1.407989 CCTCCTGATGCCTCCTCAAAC 60.408 57.143 0.00 0.00 0.00 2.93
505 506 0.250234 TCCTGATGCCTCCTCAAACG 59.750 55.000 0.00 0.00 0.00 3.60
506 507 0.745845 CCTGATGCCTCCTCAAACGG 60.746 60.000 0.00 0.00 0.00 4.44
507 508 1.372087 CTGATGCCTCCTCAAACGGC 61.372 60.000 0.00 0.00 44.02 5.68
508 509 2.436646 ATGCCTCCTCAAACGGCG 60.437 61.111 4.80 4.80 46.67 6.46
509 510 3.976701 ATGCCTCCTCAAACGGCGG 62.977 63.158 13.24 0.00 46.67 6.13
510 511 4.699522 GCCTCCTCAAACGGCGGT 62.700 66.667 13.24 0.00 33.64 5.68
511 512 2.742372 CCTCCTCAAACGGCGGTG 60.742 66.667 13.24 9.36 0.00 4.94
512 513 2.342279 CTCCTCAAACGGCGGTGA 59.658 61.111 13.24 13.54 0.00 4.02
513 514 2.027625 CTCCTCAAACGGCGGTGAC 61.028 63.158 13.24 0.00 0.00 3.67
514 515 3.047877 CCTCAAACGGCGGTGACC 61.048 66.667 13.24 0.00 0.00 4.02
515 516 2.030562 CTCAAACGGCGGTGACCT 59.969 61.111 13.24 0.00 0.00 3.85
516 517 2.280524 TCAAACGGCGGTGACCTG 60.281 61.111 13.24 0.00 0.00 4.00
517 518 2.280524 CAAACGGCGGTGACCTGA 60.281 61.111 13.24 0.00 0.00 3.86
518 519 1.890041 CAAACGGCGGTGACCTGAA 60.890 57.895 13.24 0.00 0.00 3.02
519 520 1.890510 AAACGGCGGTGACCTGAAC 60.891 57.895 13.24 0.00 0.00 3.18
520 521 3.819877 AACGGCGGTGACCTGAACC 62.820 63.158 13.24 0.00 0.00 3.62
521 522 4.308458 CGGCGGTGACCTGAACCA 62.308 66.667 0.00 0.00 37.57 3.67
522 523 2.351276 GGCGGTGACCTGAACCAT 59.649 61.111 0.00 0.00 37.57 3.55
523 524 1.745489 GGCGGTGACCTGAACCATC 60.745 63.158 0.00 0.00 37.57 3.51
524 525 1.296715 GCGGTGACCTGAACCATCT 59.703 57.895 0.00 0.00 37.57 2.90
525 526 0.535335 GCGGTGACCTGAACCATCTA 59.465 55.000 0.00 0.00 37.57 1.98
526 527 1.066430 GCGGTGACCTGAACCATCTAA 60.066 52.381 0.00 0.00 37.57 2.10
527 528 2.614481 GCGGTGACCTGAACCATCTAAA 60.614 50.000 0.00 0.00 37.57 1.85
528 529 3.262420 CGGTGACCTGAACCATCTAAAG 58.738 50.000 0.00 0.00 37.57 1.85
529 530 3.610911 GGTGACCTGAACCATCTAAAGG 58.389 50.000 0.00 0.00 37.65 3.11
530 531 3.009143 GGTGACCTGAACCATCTAAAGGT 59.991 47.826 0.00 0.00 43.93 3.50
533 534 4.828072 ACCTGAACCATCTAAAGGTCTC 57.172 45.455 0.00 0.00 36.51 3.36
534 535 4.168101 ACCTGAACCATCTAAAGGTCTCA 58.832 43.478 0.00 0.00 36.51 3.27
535 536 4.785376 ACCTGAACCATCTAAAGGTCTCAT 59.215 41.667 0.00 0.00 36.51 2.90
536 537 5.104735 ACCTGAACCATCTAAAGGTCTCATC 60.105 44.000 0.00 0.00 36.51 2.92
537 538 5.130145 CCTGAACCATCTAAAGGTCTCATCT 59.870 44.000 0.00 0.00 38.76 2.90
538 539 5.982356 TGAACCATCTAAAGGTCTCATCTG 58.018 41.667 0.00 0.00 38.76 2.90
539 540 4.414337 ACCATCTAAAGGTCTCATCTGC 57.586 45.455 0.00 0.00 32.90 4.26
540 541 3.776969 ACCATCTAAAGGTCTCATCTGCA 59.223 43.478 0.00 0.00 32.90 4.41
541 542 4.225942 ACCATCTAAAGGTCTCATCTGCAA 59.774 41.667 0.00 0.00 32.90 4.08
542 543 4.574013 CCATCTAAAGGTCTCATCTGCAAC 59.426 45.833 0.00 0.00 0.00 4.17
543 544 3.849911 TCTAAAGGTCTCATCTGCAACG 58.150 45.455 0.00 0.00 0.00 4.10
544 545 1.813513 AAAGGTCTCATCTGCAACGG 58.186 50.000 0.00 0.00 0.00 4.44
545 546 0.976641 AAGGTCTCATCTGCAACGGA 59.023 50.000 0.00 0.00 0.00 4.69
546 547 0.534412 AGGTCTCATCTGCAACGGAG 59.466 55.000 0.00 0.00 0.00 4.63
547 548 0.532573 GGTCTCATCTGCAACGGAGA 59.467 55.000 6.74 6.74 34.23 3.71
548 549 1.066858 GGTCTCATCTGCAACGGAGAA 60.067 52.381 11.19 0.00 38.07 2.87
549 550 1.996191 GTCTCATCTGCAACGGAGAAC 59.004 52.381 11.19 4.59 38.07 3.01
562 563 1.841450 GGAGAACGATAAGACGGCAG 58.159 55.000 0.00 0.00 37.61 4.85
563 564 1.201343 GAGAACGATAAGACGGCAGC 58.799 55.000 0.00 0.00 37.61 5.25
564 565 0.818296 AGAACGATAAGACGGCAGCT 59.182 50.000 0.00 0.00 37.61 4.24
565 566 1.201343 GAACGATAAGACGGCAGCTC 58.799 55.000 0.00 0.00 37.61 4.09
566 567 0.818296 AACGATAAGACGGCAGCTCT 59.182 50.000 0.00 0.00 37.61 4.09
567 568 0.818296 ACGATAAGACGGCAGCTCTT 59.182 50.000 0.00 2.68 37.61 2.85
568 569 1.203928 CGATAAGACGGCAGCTCTTG 58.796 55.000 7.08 0.00 0.00 3.02
569 570 1.576356 GATAAGACGGCAGCTCTTGG 58.424 55.000 7.08 0.00 0.00 3.61
580 581 3.329300 GCTCTTGGCTTTGTGAGGA 57.671 52.632 0.00 0.00 38.06 3.71
581 582 1.609208 GCTCTTGGCTTTGTGAGGAA 58.391 50.000 0.00 0.00 38.06 3.36
582 583 1.956477 GCTCTTGGCTTTGTGAGGAAA 59.044 47.619 0.00 0.00 38.06 3.13
583 584 2.362077 GCTCTTGGCTTTGTGAGGAAAA 59.638 45.455 0.00 0.00 38.06 2.29
584 585 3.551659 GCTCTTGGCTTTGTGAGGAAAAG 60.552 47.826 0.00 0.00 37.63 2.27
585 586 3.885297 CTCTTGGCTTTGTGAGGAAAAGA 59.115 43.478 0.25 0.00 36.88 2.52
586 587 3.885297 TCTTGGCTTTGTGAGGAAAAGAG 59.115 43.478 0.25 0.00 36.88 2.85
587 588 3.576078 TGGCTTTGTGAGGAAAAGAGA 57.424 42.857 0.25 0.00 36.88 3.10
588 589 3.214328 TGGCTTTGTGAGGAAAAGAGAC 58.786 45.455 0.25 0.00 36.88 3.36
589 590 2.224314 GGCTTTGTGAGGAAAAGAGACG 59.776 50.000 0.25 0.00 36.88 4.18
590 591 3.131396 GCTTTGTGAGGAAAAGAGACGA 58.869 45.455 0.00 0.00 36.88 4.20
591 592 3.185391 GCTTTGTGAGGAAAAGAGACGAG 59.815 47.826 0.00 0.00 36.88 4.18
592 593 4.372656 CTTTGTGAGGAAAAGAGACGAGT 58.627 43.478 0.00 0.00 36.88 4.18
593 594 3.644884 TGTGAGGAAAAGAGACGAGTC 57.355 47.619 0.00 0.00 0.00 3.36
594 595 2.031069 TGTGAGGAAAAGAGACGAGTCG 60.031 50.000 11.85 11.85 34.09 4.18
595 596 2.225963 GTGAGGAAAAGAGACGAGTCGA 59.774 50.000 21.50 0.00 34.09 4.20
596 597 3.082548 TGAGGAAAAGAGACGAGTCGAT 58.917 45.455 21.50 7.17 34.09 3.59
597 598 4.094590 GTGAGGAAAAGAGACGAGTCGATA 59.905 45.833 21.50 0.00 34.09 2.92
598 599 4.698780 TGAGGAAAAGAGACGAGTCGATAA 59.301 41.667 21.50 0.00 34.09 1.75
599 600 4.984205 AGGAAAAGAGACGAGTCGATAAC 58.016 43.478 21.50 7.53 34.09 1.89
600 601 4.104066 GGAAAAGAGACGAGTCGATAACC 58.896 47.826 21.50 7.45 34.09 2.85
601 602 3.779271 AAAGAGACGAGTCGATAACCC 57.221 47.619 21.50 2.04 34.09 4.11
602 603 2.414994 AGAGACGAGTCGATAACCCA 57.585 50.000 21.50 0.00 34.09 4.51
603 604 2.719739 AGAGACGAGTCGATAACCCAA 58.280 47.619 21.50 0.00 34.09 4.12
604 605 3.288964 AGAGACGAGTCGATAACCCAAT 58.711 45.455 21.50 0.00 34.09 3.16
605 606 3.066900 AGAGACGAGTCGATAACCCAATG 59.933 47.826 21.50 0.00 34.09 2.82
606 607 1.859080 GACGAGTCGATAACCCAATGC 59.141 52.381 21.50 0.00 0.00 3.56
607 608 1.206132 ACGAGTCGATAACCCAATGCA 59.794 47.619 21.50 0.00 0.00 3.96
608 609 1.860950 CGAGTCGATAACCCAATGCAG 59.139 52.381 6.73 0.00 0.00 4.41
609 610 2.481276 CGAGTCGATAACCCAATGCAGA 60.481 50.000 6.73 0.00 0.00 4.26
610 611 3.531538 GAGTCGATAACCCAATGCAGAA 58.468 45.455 0.00 0.00 0.00 3.02
611 612 3.938963 GAGTCGATAACCCAATGCAGAAA 59.061 43.478 0.00 0.00 0.00 2.52
612 613 4.526970 AGTCGATAACCCAATGCAGAAAT 58.473 39.130 0.00 0.00 0.00 2.17
613 614 4.576463 AGTCGATAACCCAATGCAGAAATC 59.424 41.667 0.00 0.00 0.00 2.17
614 615 3.882888 TCGATAACCCAATGCAGAAATCC 59.117 43.478 0.00 0.00 0.00 3.01
615 616 3.303990 CGATAACCCAATGCAGAAATCCG 60.304 47.826 0.00 0.00 0.00 4.18
616 617 1.923356 AACCCAATGCAGAAATCCGT 58.077 45.000 0.00 0.00 0.00 4.69
617 618 1.463674 ACCCAATGCAGAAATCCGTC 58.536 50.000 0.00 0.00 0.00 4.79
618 619 1.004745 ACCCAATGCAGAAATCCGTCT 59.995 47.619 0.00 0.00 0.00 4.18
619 620 1.402968 CCCAATGCAGAAATCCGTCTG 59.597 52.381 0.00 0.00 46.58 3.51
625 626 1.428448 CAGAAATCCGTCTGCGAACA 58.572 50.000 0.00 0.00 38.74 3.18
861 865 4.028490 GCCCATGTGGTCCGGTCA 62.028 66.667 0.00 0.00 36.04 4.02
865 869 1.374947 CATGTGGTCCGGTCAGGTT 59.625 57.895 0.00 0.00 41.99 3.50
980 1034 1.577922 CGTCTTTGAGGTCGGTCGA 59.422 57.895 0.00 0.00 0.00 4.20
1209 1293 3.096092 TGGGGTTTGATTGTAGGATTGC 58.904 45.455 0.00 0.00 0.00 3.56
1253 1342 5.950544 ATACAGTGTTAGGGTTCATGCTA 57.049 39.130 0.00 0.00 0.00 3.49
1363 1456 2.452600 TTTTGGTTGCAGGAGGAACT 57.547 45.000 0.00 0.00 44.51 3.01
1384 1477 4.351054 CACCACTGTGGAGCCCCC 62.351 72.222 32.30 0.00 40.96 5.40
1497 1590 0.035056 AAGGCGTTTCTATGGCTGCT 60.035 50.000 0.00 0.00 44.69 4.24
1546 1639 5.801350 TTTCTGCTATGTATGTTCACTGC 57.199 39.130 0.00 0.00 0.00 4.40
1587 1704 8.121086 CAGCACTTTGTTTGATATGATAGTCAG 58.879 37.037 0.00 0.00 0.00 3.51
1633 1761 8.538701 TGGAAACTTAATCATGGCATTGTAATT 58.461 29.630 0.00 0.00 0.00 1.40
2192 2347 5.821470 CCAAGCTGATATCATCAAGAACACT 59.179 40.000 5.72 0.00 39.11 3.55
2782 3200 3.104568 ACCCCCACCGTTTCCCAA 61.105 61.111 0.00 0.00 0.00 4.12
2869 3299 3.507143 AAGAGGGGGAGGCTGTGGT 62.507 63.158 0.00 0.00 0.00 4.16
2878 3308 0.912486 GAGGCTGTGGTGGTTAGGAT 59.088 55.000 0.00 0.00 0.00 3.24
2991 3439 0.889306 ACTCTCCGACAAGGTACTGC 59.111 55.000 0.00 0.00 40.86 4.40
3271 3751 9.733556 TTCTATGTAATAACTGGTGTTTGATGT 57.266 29.630 0.00 0.00 37.59 3.06
3383 3965 8.535335 ACAGAAGATACACTGACTGAAATGTAT 58.465 33.333 0.00 0.00 40.19 2.29
3710 4296 4.276926 GGTGCAATGAAAGTTCTTCTCTGT 59.723 41.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.102978 AAAAGCACTGAACAGCCGTT 58.897 45.000 1.46 0.00 38.33 4.44
1 2 1.102978 AAAAAGCACTGAACAGCCGT 58.897 45.000 1.46 0.00 0.00 5.68
2 3 1.480205 CAAAAAGCACTGAACAGCCG 58.520 50.000 1.46 0.00 0.00 5.52
3 4 1.211743 GCAAAAAGCACTGAACAGCC 58.788 50.000 1.46 0.00 44.79 4.85
14 15 3.049912 CTCTTAACCCGTTGCAAAAAGC 58.950 45.455 0.00 0.00 45.96 3.51
15 16 4.561735 TCTCTTAACCCGTTGCAAAAAG 57.438 40.909 0.00 0.00 0.00 2.27
16 17 5.523438 AATCTCTTAACCCGTTGCAAAAA 57.477 34.783 0.00 0.00 0.00 1.94
17 18 5.523438 AAATCTCTTAACCCGTTGCAAAA 57.477 34.783 0.00 0.00 0.00 2.44
18 19 5.523438 AAAATCTCTTAACCCGTTGCAAA 57.477 34.783 0.00 0.00 0.00 3.68
19 20 6.349777 CCATAAAATCTCTTAACCCGTTGCAA 60.350 38.462 0.00 0.00 0.00 4.08
20 21 5.124776 CCATAAAATCTCTTAACCCGTTGCA 59.875 40.000 0.00 0.00 0.00 4.08
21 22 5.124936 ACCATAAAATCTCTTAACCCGTTGC 59.875 40.000 0.00 0.00 0.00 4.17
22 23 6.150474 ACACCATAAAATCTCTTAACCCGTTG 59.850 38.462 0.00 0.00 0.00 4.10
23 24 6.243148 ACACCATAAAATCTCTTAACCCGTT 58.757 36.000 0.00 0.00 0.00 4.44
24 25 5.812286 ACACCATAAAATCTCTTAACCCGT 58.188 37.500 0.00 0.00 0.00 5.28
25 26 6.753107 AACACCATAAAATCTCTTAACCCG 57.247 37.500 0.00 0.00 0.00 5.28
48 49 7.203910 ACCAAGTCGTTAATATGTTGCAAAAA 58.796 30.769 0.00 0.00 0.00 1.94
49 50 6.740110 ACCAAGTCGTTAATATGTTGCAAAA 58.260 32.000 0.00 0.00 0.00 2.44
50 51 6.320494 ACCAAGTCGTTAATATGTTGCAAA 57.680 33.333 0.00 0.00 0.00 3.68
51 52 5.950758 ACCAAGTCGTTAATATGTTGCAA 57.049 34.783 0.00 0.00 0.00 4.08
52 53 6.167685 ACTACCAAGTCGTTAATATGTTGCA 58.832 36.000 0.00 0.00 0.00 4.08
53 54 6.657836 ACTACCAAGTCGTTAATATGTTGC 57.342 37.500 0.00 0.00 0.00 4.17
54 55 8.173130 GGAAACTACCAAGTCGTTAATATGTTG 58.827 37.037 0.00 0.00 33.75 3.33
55 56 8.098912 AGGAAACTACCAAGTCGTTAATATGTT 58.901 33.333 0.00 0.00 40.61 2.71
56 57 7.548075 CAGGAAACTACCAAGTCGTTAATATGT 59.452 37.037 0.00 0.00 40.21 2.29
57 58 7.465513 GCAGGAAACTACCAAGTCGTTAATATG 60.466 40.741 0.00 0.00 40.21 1.78
58 59 6.537660 GCAGGAAACTACCAAGTCGTTAATAT 59.462 38.462 0.00 0.00 40.21 1.28
59 60 5.870978 GCAGGAAACTACCAAGTCGTTAATA 59.129 40.000 0.00 0.00 40.21 0.98
60 61 4.694037 GCAGGAAACTACCAAGTCGTTAAT 59.306 41.667 0.00 0.00 40.21 1.40
61 62 4.060205 GCAGGAAACTACCAAGTCGTTAA 58.940 43.478 0.00 0.00 40.21 2.01
62 63 3.069872 TGCAGGAAACTACCAAGTCGTTA 59.930 43.478 0.00 0.00 40.21 3.18
63 64 2.158871 TGCAGGAAACTACCAAGTCGTT 60.159 45.455 0.00 0.00 40.21 3.85
64 65 1.414919 TGCAGGAAACTACCAAGTCGT 59.585 47.619 0.00 0.00 40.21 4.34
65 66 2.163818 TGCAGGAAACTACCAAGTCG 57.836 50.000 0.00 0.00 40.21 4.18
66 67 3.004419 GGTTTGCAGGAAACTACCAAGTC 59.996 47.826 16.27 0.00 43.20 3.01
67 68 2.956333 GGTTTGCAGGAAACTACCAAGT 59.044 45.455 16.27 0.00 43.20 3.16
68 69 3.222603 AGGTTTGCAGGAAACTACCAAG 58.777 45.455 16.27 0.00 43.20 3.61
69 70 3.306472 AGGTTTGCAGGAAACTACCAA 57.694 42.857 16.27 0.00 43.20 3.67
70 71 3.809324 GCTAGGTTTGCAGGAAACTACCA 60.809 47.826 16.27 0.46 43.20 3.25
71 72 2.747989 GCTAGGTTTGCAGGAAACTACC 59.252 50.000 16.27 1.87 43.20 3.18
72 73 2.747989 GGCTAGGTTTGCAGGAAACTAC 59.252 50.000 16.27 2.06 43.20 2.73
73 74 2.373836 TGGCTAGGTTTGCAGGAAACTA 59.626 45.455 16.27 6.93 43.20 2.24
74 75 1.144913 TGGCTAGGTTTGCAGGAAACT 59.855 47.619 16.27 6.20 43.20 2.66
75 76 1.269723 GTGGCTAGGTTTGCAGGAAAC 59.730 52.381 8.99 8.99 42.97 2.78
76 77 1.133637 TGTGGCTAGGTTTGCAGGAAA 60.134 47.619 0.00 0.00 0.00 3.13
77 78 0.476338 TGTGGCTAGGTTTGCAGGAA 59.524 50.000 0.00 0.00 0.00 3.36
78 79 0.476338 TTGTGGCTAGGTTTGCAGGA 59.524 50.000 0.00 0.00 0.00 3.86
79 80 1.327303 TTTGTGGCTAGGTTTGCAGG 58.673 50.000 0.00 0.00 0.00 4.85
80 81 2.297033 ACATTTGTGGCTAGGTTTGCAG 59.703 45.455 0.00 0.00 0.00 4.41
81 82 2.035704 CACATTTGTGGCTAGGTTTGCA 59.964 45.455 2.69 0.00 42.10 4.08
82 83 2.676076 CACATTTGTGGCTAGGTTTGC 58.324 47.619 2.69 0.00 42.10 3.68
93 94 2.865551 GCAAGAAACCACCACATTTGTG 59.134 45.455 3.67 3.67 45.23 3.33
94 95 2.499289 TGCAAGAAACCACCACATTTGT 59.501 40.909 0.00 0.00 0.00 2.83
95 96 3.176552 TGCAAGAAACCACCACATTTG 57.823 42.857 0.00 0.00 0.00 2.32
96 97 3.902881 TTGCAAGAAACCACCACATTT 57.097 38.095 0.00 0.00 0.00 2.32
97 98 4.128643 CAATTGCAAGAAACCACCACATT 58.871 39.130 4.94 0.00 0.00 2.71
98 99 3.387374 TCAATTGCAAGAAACCACCACAT 59.613 39.130 4.94 0.00 0.00 3.21
99 100 2.762887 TCAATTGCAAGAAACCACCACA 59.237 40.909 4.94 0.00 0.00 4.17
100 101 3.123050 GTCAATTGCAAGAAACCACCAC 58.877 45.455 4.94 0.00 0.00 4.16
101 102 3.030291 AGTCAATTGCAAGAAACCACCA 58.970 40.909 4.94 0.00 0.00 4.17
102 103 3.552890 GGAGTCAATTGCAAGAAACCACC 60.553 47.826 4.94 5.79 0.00 4.61
103 104 3.319122 AGGAGTCAATTGCAAGAAACCAC 59.681 43.478 4.94 0.00 0.00 4.16
104 105 3.318839 CAGGAGTCAATTGCAAGAAACCA 59.681 43.478 4.94 0.00 0.00 3.67
105 106 3.569701 TCAGGAGTCAATTGCAAGAAACC 59.430 43.478 4.94 5.02 0.00 3.27
106 107 4.836125 TCAGGAGTCAATTGCAAGAAAC 57.164 40.909 4.94 2.49 0.00 2.78
107 108 5.775686 CAATCAGGAGTCAATTGCAAGAAA 58.224 37.500 4.94 0.00 0.00 2.52
108 109 5.381174 CAATCAGGAGTCAATTGCAAGAA 57.619 39.130 4.94 0.00 0.00 2.52
114 115 5.159209 GTTCTTGCAATCAGGAGTCAATTG 58.841 41.667 0.00 0.00 34.30 2.32
115 116 4.083110 CGTTCTTGCAATCAGGAGTCAATT 60.083 41.667 0.00 0.00 29.67 2.32
116 117 3.438087 CGTTCTTGCAATCAGGAGTCAAT 59.562 43.478 0.00 0.00 29.67 2.57
117 118 2.807967 CGTTCTTGCAATCAGGAGTCAA 59.192 45.455 0.00 0.00 29.67 3.18
118 119 2.416747 CGTTCTTGCAATCAGGAGTCA 58.583 47.619 0.00 0.00 29.67 3.41
119 120 1.734465 CCGTTCTTGCAATCAGGAGTC 59.266 52.381 0.00 0.00 29.67 3.36
120 121 1.072331 ACCGTTCTTGCAATCAGGAGT 59.928 47.619 14.58 1.03 29.67 3.85
121 122 1.813513 ACCGTTCTTGCAATCAGGAG 58.186 50.000 14.58 0.00 29.67 3.69
122 123 2.270352 AACCGTTCTTGCAATCAGGA 57.730 45.000 14.58 0.32 0.00 3.86
123 124 2.351738 GGAAACCGTTCTTGCAATCAGG 60.352 50.000 0.00 4.20 33.92 3.86
137 138 2.770164 ATCTGGAACTCTGGAAACCG 57.230 50.000 0.00 0.00 0.00 4.44
151 152 9.150424 GGTGATTACCTATGACCCAGTATCTGG 62.150 48.148 8.65 8.65 45.88 3.86
152 153 6.295349 GGTGATTACCTATGACCCAGTATCTG 60.295 46.154 0.00 0.00 43.97 2.90
153 154 5.780793 GGTGATTACCTATGACCCAGTATCT 59.219 44.000 0.00 0.00 43.97 1.98
154 155 6.038997 GGTGATTACCTATGACCCAGTATC 57.961 45.833 0.00 0.00 43.97 2.24
169 170 3.190535 ACATCCAAACGCAAGGTGATTAC 59.809 43.478 0.00 0.00 46.39 1.89
170 171 3.417101 ACATCCAAACGCAAGGTGATTA 58.583 40.909 0.00 0.00 46.39 1.75
171 172 2.238521 ACATCCAAACGCAAGGTGATT 58.761 42.857 0.00 0.00 46.39 2.57
172 173 1.909700 ACATCCAAACGCAAGGTGAT 58.090 45.000 0.00 0.00 46.39 3.06
173 174 2.422597 CTACATCCAAACGCAAGGTGA 58.577 47.619 0.00 0.00 46.39 4.02
174 175 1.135689 GCTACATCCAAACGCAAGGTG 60.136 52.381 0.00 0.00 46.39 4.00
175 176 1.165270 GCTACATCCAAACGCAAGGT 58.835 50.000 0.00 0.00 46.39 3.50
176 177 0.451783 GGCTACATCCAAACGCAAGG 59.548 55.000 0.00 0.00 46.39 3.61
177 178 1.164411 TGGCTACATCCAAACGCAAG 58.836 50.000 0.00 0.00 36.81 4.01
178 179 1.539388 CTTGGCTACATCCAAACGCAA 59.461 47.619 0.00 0.00 44.73 4.85
179 180 1.164411 CTTGGCTACATCCAAACGCA 58.836 50.000 0.00 0.00 44.73 5.24
180 181 1.448985 TCTTGGCTACATCCAAACGC 58.551 50.000 0.00 0.00 44.73 4.84
181 182 4.035208 GGTAATCTTGGCTACATCCAAACG 59.965 45.833 0.00 0.00 44.73 3.60
182 183 5.193679 AGGTAATCTTGGCTACATCCAAAC 58.806 41.667 0.00 0.00 44.73 2.93
183 184 5.450818 AGGTAATCTTGGCTACATCCAAA 57.549 39.130 0.00 0.00 44.73 3.28
184 185 5.192927 CAAGGTAATCTTGGCTACATCCAA 58.807 41.667 0.00 0.00 46.81 3.53
185 186 4.780815 CAAGGTAATCTTGGCTACATCCA 58.219 43.478 0.00 0.00 46.81 3.41
196 197 5.946377 GTGGATCAAGGAACAAGGTAATCTT 59.054 40.000 0.00 0.00 35.79 2.40
197 198 5.014123 TGTGGATCAAGGAACAAGGTAATCT 59.986 40.000 0.00 0.00 0.00 2.40
198 199 5.253330 TGTGGATCAAGGAACAAGGTAATC 58.747 41.667 0.00 0.00 0.00 1.75
199 200 5.255397 TGTGGATCAAGGAACAAGGTAAT 57.745 39.130 0.00 0.00 0.00 1.89
200 201 4.715534 TGTGGATCAAGGAACAAGGTAA 57.284 40.909 0.00 0.00 0.00 2.85
201 202 4.715534 TTGTGGATCAAGGAACAAGGTA 57.284 40.909 0.00 0.00 0.00 3.08
202 203 3.593442 TTGTGGATCAAGGAACAAGGT 57.407 42.857 0.00 0.00 0.00 3.50
203 204 4.813027 CAATTGTGGATCAAGGAACAAGG 58.187 43.478 0.00 0.00 39.55 3.61
204 205 4.240096 GCAATTGTGGATCAAGGAACAAG 58.760 43.478 7.40 0.00 39.55 3.16
205 206 3.006752 GGCAATTGTGGATCAAGGAACAA 59.993 43.478 7.40 0.00 39.55 2.83
206 207 2.562298 GGCAATTGTGGATCAAGGAACA 59.438 45.455 7.40 0.00 39.55 3.18
207 208 2.562298 TGGCAATTGTGGATCAAGGAAC 59.438 45.455 7.40 0.00 39.55 3.62
208 209 2.886913 TGGCAATTGTGGATCAAGGAA 58.113 42.857 7.40 0.00 39.55 3.36
209 210 2.562298 GTTGGCAATTGTGGATCAAGGA 59.438 45.455 1.92 0.00 39.55 3.36
210 211 2.299582 TGTTGGCAATTGTGGATCAAGG 59.700 45.455 1.92 0.00 39.55 3.61
211 212 3.256383 TCTGTTGGCAATTGTGGATCAAG 59.744 43.478 1.92 0.00 39.55 3.02
212 213 3.229293 TCTGTTGGCAATTGTGGATCAA 58.771 40.909 1.92 2.41 40.53 2.57
213 214 2.874014 TCTGTTGGCAATTGTGGATCA 58.126 42.857 1.92 0.00 0.00 2.92
214 215 3.578688 GTTCTGTTGGCAATTGTGGATC 58.421 45.455 1.92 0.00 0.00 3.36
215 216 2.299867 GGTTCTGTTGGCAATTGTGGAT 59.700 45.455 1.92 0.00 0.00 3.41
216 217 1.686052 GGTTCTGTTGGCAATTGTGGA 59.314 47.619 1.92 0.00 0.00 4.02
217 218 1.411977 TGGTTCTGTTGGCAATTGTGG 59.588 47.619 1.92 0.00 0.00 4.17
218 219 2.886862 TGGTTCTGTTGGCAATTGTG 57.113 45.000 1.92 0.00 0.00 3.33
219 220 3.387374 TCATTGGTTCTGTTGGCAATTGT 59.613 39.130 1.92 0.00 0.00 2.71
220 221 3.742369 GTCATTGGTTCTGTTGGCAATTG 59.258 43.478 1.92 0.00 0.00 2.32
221 222 3.642848 AGTCATTGGTTCTGTTGGCAATT 59.357 39.130 1.92 0.00 0.00 2.32
222 223 3.233507 AGTCATTGGTTCTGTTGGCAAT 58.766 40.909 1.92 0.00 0.00 3.56
223 224 2.622942 GAGTCATTGGTTCTGTTGGCAA 59.377 45.455 0.00 0.00 0.00 4.52
224 225 2.158623 AGAGTCATTGGTTCTGTTGGCA 60.159 45.455 0.00 0.00 0.00 4.92
225 226 2.508526 AGAGTCATTGGTTCTGTTGGC 58.491 47.619 0.00 0.00 0.00 4.52
226 227 7.921786 TTATTAGAGTCATTGGTTCTGTTGG 57.078 36.000 0.00 0.00 0.00 3.77
229 230 8.462016 GCAAATTATTAGAGTCATTGGTTCTGT 58.538 33.333 0.00 0.00 0.00 3.41
230 231 7.641411 CGCAAATTATTAGAGTCATTGGTTCTG 59.359 37.037 0.00 0.00 0.00 3.02
231 232 7.201732 CCGCAAATTATTAGAGTCATTGGTTCT 60.202 37.037 0.00 0.00 0.00 3.01
232 233 6.912591 CCGCAAATTATTAGAGTCATTGGTTC 59.087 38.462 0.00 0.00 0.00 3.62
233 234 6.680378 GCCGCAAATTATTAGAGTCATTGGTT 60.680 38.462 0.00 0.00 0.00 3.67
234 235 5.221048 GCCGCAAATTATTAGAGTCATTGGT 60.221 40.000 0.00 0.00 0.00 3.67
235 236 5.009010 AGCCGCAAATTATTAGAGTCATTGG 59.991 40.000 0.00 0.00 0.00 3.16
236 237 6.064846 AGCCGCAAATTATTAGAGTCATTG 57.935 37.500 0.00 0.00 0.00 2.82
237 238 5.239525 GGAGCCGCAAATTATTAGAGTCATT 59.760 40.000 0.00 0.00 0.00 2.57
238 239 4.757149 GGAGCCGCAAATTATTAGAGTCAT 59.243 41.667 0.00 0.00 0.00 3.06
239 240 4.127171 GGAGCCGCAAATTATTAGAGTCA 58.873 43.478 0.00 0.00 0.00 3.41
240 241 4.127171 TGGAGCCGCAAATTATTAGAGTC 58.873 43.478 0.00 0.00 0.00 3.36
241 242 4.150897 TGGAGCCGCAAATTATTAGAGT 57.849 40.909 0.00 0.00 0.00 3.24
242 243 4.756642 TGATGGAGCCGCAAATTATTAGAG 59.243 41.667 0.00 0.00 0.00 2.43
243 244 4.713553 TGATGGAGCCGCAAATTATTAGA 58.286 39.130 0.00 0.00 0.00 2.10
244 245 5.437289 TTGATGGAGCCGCAAATTATTAG 57.563 39.130 0.00 0.00 0.00 1.73
245 246 5.451242 GGTTTGATGGAGCCGCAAATTATTA 60.451 40.000 9.54 0.00 34.47 0.98
246 247 4.432712 GTTTGATGGAGCCGCAAATTATT 58.567 39.130 9.54 0.00 34.47 1.40
247 248 3.181476 GGTTTGATGGAGCCGCAAATTAT 60.181 43.478 9.54 0.00 34.47 1.28
248 249 2.165437 GGTTTGATGGAGCCGCAAATTA 59.835 45.455 9.54 0.00 34.47 1.40
249 250 1.066929 GGTTTGATGGAGCCGCAAATT 60.067 47.619 9.54 0.00 34.47 1.82
250 251 0.532115 GGTTTGATGGAGCCGCAAAT 59.468 50.000 9.54 0.00 34.47 2.32
251 252 0.539438 AGGTTTGATGGAGCCGCAAA 60.539 50.000 0.00 4.03 0.00 3.68
252 253 0.960364 GAGGTTTGATGGAGCCGCAA 60.960 55.000 0.00 0.00 0.00 4.85
253 254 1.377202 GAGGTTTGATGGAGCCGCA 60.377 57.895 0.00 0.00 0.00 5.69
254 255 0.678048 AAGAGGTTTGATGGAGCCGC 60.678 55.000 0.00 0.00 0.00 6.53
255 256 1.470098 CAAAGAGGTTTGATGGAGCCG 59.530 52.381 0.00 0.00 45.22 5.52
256 257 2.795329 TCAAAGAGGTTTGATGGAGCC 58.205 47.619 0.00 0.00 45.82 4.70
263 264 7.094162 TGTTACAACATGTTCAAAGAGGTTTGA 60.094 33.333 8.48 0.00 41.08 2.69
264 265 7.032580 TGTTACAACATGTTCAAAGAGGTTTG 58.967 34.615 8.48 0.00 38.22 2.93
265 266 7.164230 TGTTACAACATGTTCAAAGAGGTTT 57.836 32.000 8.48 0.00 33.17 3.27
266 267 6.767524 TGTTACAACATGTTCAAAGAGGTT 57.232 33.333 8.48 0.00 33.17 3.50
267 268 6.767524 TTGTTACAACATGTTCAAAGAGGT 57.232 33.333 8.48 4.43 38.95 3.85
268 269 7.920151 TGATTTGTTACAACATGTTCAAAGAGG 59.080 33.333 20.88 8.27 38.95 3.69
269 270 8.854979 TGATTTGTTACAACATGTTCAAAGAG 57.145 30.769 20.88 8.85 38.95 2.85
270 271 9.814899 ATTGATTTGTTACAACATGTTCAAAGA 57.185 25.926 20.88 10.63 38.95 2.52
271 272 9.852481 CATTGATTTGTTACAACATGTTCAAAG 57.148 29.630 20.88 9.73 38.95 2.77
272 273 8.333908 GCATTGATTTGTTACAACATGTTCAAA 58.666 29.630 19.46 19.46 38.95 2.69
273 274 7.042187 GGCATTGATTTGTTACAACATGTTCAA 60.042 33.333 8.48 7.22 38.95 2.69
274 275 6.423302 GGCATTGATTTGTTACAACATGTTCA 59.577 34.615 8.48 0.34 38.95 3.18
275 276 6.423302 TGGCATTGATTTGTTACAACATGTTC 59.577 34.615 8.48 0.00 38.95 3.18
276 277 6.286758 TGGCATTGATTTGTTACAACATGTT 58.713 32.000 4.92 4.92 38.95 2.71
277 278 5.851720 TGGCATTGATTTGTTACAACATGT 58.148 33.333 0.00 0.00 38.95 3.21
278 279 6.369340 ACATGGCATTGATTTGTTACAACATG 59.631 34.615 14.91 14.91 38.95 3.21
279 280 6.369340 CACATGGCATTGATTTGTTACAACAT 59.631 34.615 0.00 0.00 38.95 2.71
280 281 5.695363 CACATGGCATTGATTTGTTACAACA 59.305 36.000 0.00 0.00 37.08 3.33
281 282 5.389725 GCACATGGCATTGATTTGTTACAAC 60.390 40.000 0.00 0.00 43.97 3.32
282 283 4.689812 GCACATGGCATTGATTTGTTACAA 59.310 37.500 0.00 0.00 43.97 2.41
283 284 4.244066 GCACATGGCATTGATTTGTTACA 58.756 39.130 0.00 0.00 43.97 2.41
284 285 4.845621 GCACATGGCATTGATTTGTTAC 57.154 40.909 0.00 0.00 43.97 2.50
285 286 3.260128 TGGCACATGGCATTGATTTGTTA 59.740 39.130 3.65 0.00 46.12 2.41
286 287 2.038689 TGGCACATGGCATTGATTTGTT 59.961 40.909 3.65 0.00 46.12 2.83
287 288 1.624312 TGGCACATGGCATTGATTTGT 59.376 42.857 3.65 0.00 46.12 2.83
288 289 2.388310 TGGCACATGGCATTGATTTG 57.612 45.000 3.65 0.00 46.12 2.32
297 298 1.876497 ATTGGACGTTGGCACATGGC 61.876 55.000 0.00 0.00 39.30 4.40
298 299 0.171007 GATTGGACGTTGGCACATGG 59.829 55.000 0.00 0.00 39.30 3.66
299 300 0.880441 TGATTGGACGTTGGCACATG 59.120 50.000 0.00 0.00 39.30 3.21
300 301 0.881118 GTGATTGGACGTTGGCACAT 59.119 50.000 0.00 0.00 39.30 3.21
301 302 1.169661 GGTGATTGGACGTTGGCACA 61.170 55.000 0.00 0.00 0.00 4.57
302 303 1.169661 TGGTGATTGGACGTTGGCAC 61.170 55.000 0.00 0.00 0.00 5.01
303 304 0.888736 CTGGTGATTGGACGTTGGCA 60.889 55.000 0.00 0.00 0.00 4.92
304 305 0.605319 TCTGGTGATTGGACGTTGGC 60.605 55.000 0.00 0.00 0.00 4.52
305 306 1.270839 ACTCTGGTGATTGGACGTTGG 60.271 52.381 0.00 0.00 0.00 3.77
306 307 2.169832 ACTCTGGTGATTGGACGTTG 57.830 50.000 0.00 0.00 0.00 4.10
307 308 2.930826 AACTCTGGTGATTGGACGTT 57.069 45.000 0.00 0.00 0.00 3.99
308 309 2.631062 TGTAACTCTGGTGATTGGACGT 59.369 45.455 0.00 0.00 0.00 4.34
309 310 3.254060 CTGTAACTCTGGTGATTGGACG 58.746 50.000 0.00 0.00 0.00 4.79
310 311 4.246458 GACTGTAACTCTGGTGATTGGAC 58.754 47.826 0.00 0.00 0.00 4.02
311 312 3.260884 GGACTGTAACTCTGGTGATTGGA 59.739 47.826 0.00 0.00 0.00 3.53
312 313 3.261897 AGGACTGTAACTCTGGTGATTGG 59.738 47.826 0.00 0.00 0.00 3.16
313 314 4.248859 CAGGACTGTAACTCTGGTGATTG 58.751 47.826 0.00 0.00 0.00 2.67
314 315 3.307059 GCAGGACTGTAACTCTGGTGATT 60.307 47.826 0.82 0.00 0.00 2.57
315 316 2.234908 GCAGGACTGTAACTCTGGTGAT 59.765 50.000 0.82 0.00 0.00 3.06
316 317 1.618837 GCAGGACTGTAACTCTGGTGA 59.381 52.381 0.82 0.00 0.00 4.02
317 318 1.344438 TGCAGGACTGTAACTCTGGTG 59.656 52.381 0.82 0.00 0.00 4.17
318 319 1.717032 TGCAGGACTGTAACTCTGGT 58.283 50.000 0.82 0.00 0.00 4.00
319 320 3.340814 AATGCAGGACTGTAACTCTGG 57.659 47.619 0.82 0.00 0.00 3.86
320 321 3.686726 GGAAATGCAGGACTGTAACTCTG 59.313 47.826 0.82 0.00 0.00 3.35
321 322 3.307762 GGGAAATGCAGGACTGTAACTCT 60.308 47.826 0.82 0.00 0.00 3.24
322 323 3.010420 GGGAAATGCAGGACTGTAACTC 58.990 50.000 0.82 0.00 0.00 3.01
323 324 2.375174 TGGGAAATGCAGGACTGTAACT 59.625 45.455 0.82 0.00 0.00 2.24
324 325 2.790433 TGGGAAATGCAGGACTGTAAC 58.210 47.619 0.82 0.00 0.00 2.50
325 326 3.517296 TTGGGAAATGCAGGACTGTAA 57.483 42.857 0.82 0.00 0.00 2.41
326 327 3.517296 TTTGGGAAATGCAGGACTGTA 57.483 42.857 0.82 0.00 0.00 2.74
327 328 2.380064 TTTGGGAAATGCAGGACTGT 57.620 45.000 0.82 0.00 0.00 3.55
328 329 4.038402 GGATATTTGGGAAATGCAGGACTG 59.962 45.833 0.00 0.00 32.38 3.51
329 330 4.218312 GGATATTTGGGAAATGCAGGACT 58.782 43.478 0.00 0.00 32.38 3.85
330 331 3.960102 TGGATATTTGGGAAATGCAGGAC 59.040 43.478 0.00 0.00 32.38 3.85
331 332 4.262891 TGGATATTTGGGAAATGCAGGA 57.737 40.909 0.00 0.00 32.38 3.86
332 333 6.669125 TTATGGATATTTGGGAAATGCAGG 57.331 37.500 0.00 0.00 32.38 4.85
333 334 9.028284 AGTATTATGGATATTTGGGAAATGCAG 57.972 33.333 0.00 0.00 32.38 4.41
334 335 8.954834 AGTATTATGGATATTTGGGAAATGCA 57.045 30.769 0.00 0.00 32.38 3.96
346 347 9.575868 CCGTCCTGATACTAGTATTATGGATAT 57.424 37.037 23.23 3.15 0.00 1.63
347 348 8.775151 TCCGTCCTGATACTAGTATTATGGATA 58.225 37.037 23.23 14.99 0.00 2.59
348 349 7.640313 TCCGTCCTGATACTAGTATTATGGAT 58.360 38.462 23.23 4.34 0.00 3.41
349 350 7.024345 TCCGTCCTGATACTAGTATTATGGA 57.976 40.000 16.46 18.41 0.00 3.41
350 351 6.319152 CCTCCGTCCTGATACTAGTATTATGG 59.681 46.154 16.46 16.74 0.00 2.74
351 352 6.885376 ACCTCCGTCCTGATACTAGTATTATG 59.115 42.308 16.46 9.75 0.00 1.90
352 353 7.030234 ACCTCCGTCCTGATACTAGTATTAT 57.970 40.000 16.46 0.00 0.00 1.28
353 354 6.445451 ACCTCCGTCCTGATACTAGTATTA 57.555 41.667 16.46 11.59 0.00 0.98
354 355 5.315348 GACCTCCGTCCTGATACTAGTATT 58.685 45.833 16.46 1.02 32.40 1.89
355 356 4.909001 GACCTCCGTCCTGATACTAGTAT 58.091 47.826 15.37 15.37 32.40 2.12
356 357 4.348863 GACCTCCGTCCTGATACTAGTA 57.651 50.000 4.77 4.77 32.40 1.82
357 358 3.211718 GACCTCCGTCCTGATACTAGT 57.788 52.381 0.00 0.00 32.40 2.57
375 376 0.611714 ACTTGTGTATGGTCCGGGAC 59.388 55.000 19.06 19.06 0.00 4.46
376 377 0.611200 CACTTGTGTATGGTCCGGGA 59.389 55.000 0.00 0.00 0.00 5.14
377 378 0.392461 CCACTTGTGTATGGTCCGGG 60.392 60.000 0.00 0.00 0.00 5.73
378 379 0.323629 ACCACTTGTGTATGGTCCGG 59.676 55.000 0.00 0.00 46.62 5.14
379 380 3.927555 ACCACTTGTGTATGGTCCG 57.072 52.632 0.00 0.00 46.62 4.79
383 384 3.127548 GCTTGATGACCACTTGTGTATGG 59.872 47.826 0.00 0.00 42.13 2.74
384 385 4.005650 AGCTTGATGACCACTTGTGTATG 58.994 43.478 0.00 0.00 0.00 2.39
385 386 4.256920 GAGCTTGATGACCACTTGTGTAT 58.743 43.478 0.00 0.00 0.00 2.29
386 387 3.557054 GGAGCTTGATGACCACTTGTGTA 60.557 47.826 0.00 0.00 0.00 2.90
387 388 2.498167 GAGCTTGATGACCACTTGTGT 58.502 47.619 0.00 0.00 0.00 3.72
388 389 1.808945 GGAGCTTGATGACCACTTGTG 59.191 52.381 0.00 0.00 0.00 3.33
389 390 1.421268 TGGAGCTTGATGACCACTTGT 59.579 47.619 0.00 0.00 0.00 3.16
390 391 1.808945 GTGGAGCTTGATGACCACTTG 59.191 52.381 11.72 0.00 46.14 3.16
391 392 2.191128 GTGGAGCTTGATGACCACTT 57.809 50.000 11.72 0.00 46.14 3.16
392 393 3.944476 GTGGAGCTTGATGACCACT 57.056 52.632 11.72 0.00 46.14 4.00
394 395 0.325933 CTGGTGGAGCTTGATGACCA 59.674 55.000 0.00 0.00 35.41 4.02
395 396 0.393537 CCTGGTGGAGCTTGATGACC 60.394 60.000 0.00 0.00 34.57 4.02
396 397 0.326264 ACCTGGTGGAGCTTGATGAC 59.674 55.000 0.00 0.00 37.04 3.06
397 398 0.325933 CACCTGGTGGAGCTTGATGA 59.674 55.000 19.23 0.00 37.04 2.92
398 399 1.310933 GCACCTGGTGGAGCTTGATG 61.311 60.000 27.02 0.00 44.80 3.07
399 400 1.001641 GCACCTGGTGGAGCTTGAT 60.002 57.895 27.02 0.00 44.80 2.57
400 401 2.431683 GCACCTGGTGGAGCTTGA 59.568 61.111 27.02 0.00 44.80 3.02
405 406 2.219875 AGGAGTGCACCTGGTGGAG 61.220 63.158 27.02 3.52 39.01 3.86
406 407 2.122413 AGGAGTGCACCTGGTGGA 60.122 61.111 27.02 22.73 39.01 4.02
412 413 1.462238 AGGTTCCAGGAGTGCACCT 60.462 57.895 14.63 4.83 41.43 4.00
413 414 1.003233 GAGGTTCCAGGAGTGCACC 60.003 63.158 14.63 4.90 0.00 5.01
414 415 1.374758 CGAGGTTCCAGGAGTGCAC 60.375 63.158 9.40 9.40 0.00 4.57
415 416 1.118965 TTCGAGGTTCCAGGAGTGCA 61.119 55.000 0.00 0.00 0.00 4.57
416 417 0.390472 CTTCGAGGTTCCAGGAGTGC 60.390 60.000 0.00 0.00 0.00 4.40
417 418 1.257743 TCTTCGAGGTTCCAGGAGTG 58.742 55.000 0.00 0.00 0.00 3.51
418 419 2.234908 CAATCTTCGAGGTTCCAGGAGT 59.765 50.000 0.00 0.00 0.00 3.85
419 420 2.419297 CCAATCTTCGAGGTTCCAGGAG 60.419 54.545 0.00 0.00 0.00 3.69
420 421 1.555075 CCAATCTTCGAGGTTCCAGGA 59.445 52.381 0.00 0.00 0.00 3.86
421 422 1.279271 ACCAATCTTCGAGGTTCCAGG 59.721 52.381 0.00 0.00 29.58 4.45
422 423 2.350522 CACCAATCTTCGAGGTTCCAG 58.649 52.381 0.00 0.00 32.15 3.86
423 424 1.003118 CCACCAATCTTCGAGGTTCCA 59.997 52.381 0.00 0.00 32.15 3.53
424 425 1.739067 CCACCAATCTTCGAGGTTCC 58.261 55.000 0.00 0.00 32.15 3.62
425 426 1.087501 GCCACCAATCTTCGAGGTTC 58.912 55.000 0.00 0.00 32.15 3.62
426 427 0.322546 GGCCACCAATCTTCGAGGTT 60.323 55.000 0.00 0.00 32.15 3.50
427 428 1.299976 GGCCACCAATCTTCGAGGT 59.700 57.895 0.00 0.00 35.65 3.85
428 429 1.815421 CGGCCACCAATCTTCGAGG 60.815 63.158 2.24 0.00 0.00 4.63
429 430 1.815421 CCGGCCACCAATCTTCGAG 60.815 63.158 2.24 0.00 0.00 4.04
430 431 1.622607 ATCCGGCCACCAATCTTCGA 61.623 55.000 2.24 0.00 0.00 3.71
431 432 1.153168 ATCCGGCCACCAATCTTCG 60.153 57.895 2.24 0.00 0.00 3.79
432 433 0.107214 TGATCCGGCCACCAATCTTC 60.107 55.000 2.24 0.00 0.00 2.87
433 434 0.552848 ATGATCCGGCCACCAATCTT 59.447 50.000 2.24 0.00 0.00 2.40
434 435 1.072331 GTATGATCCGGCCACCAATCT 59.928 52.381 2.24 0.00 0.00 2.40
435 436 1.202758 TGTATGATCCGGCCACCAATC 60.203 52.381 2.24 0.00 0.00 2.67
436 437 0.843309 TGTATGATCCGGCCACCAAT 59.157 50.000 2.24 0.00 0.00 3.16
437 438 0.107410 GTGTATGATCCGGCCACCAA 60.107 55.000 2.24 0.00 0.00 3.67
438 439 1.268283 TGTGTATGATCCGGCCACCA 61.268 55.000 2.24 0.00 0.00 4.17
439 440 0.108585 ATGTGTATGATCCGGCCACC 59.891 55.000 2.24 0.00 0.00 4.61
440 441 1.229428 CATGTGTATGATCCGGCCAC 58.771 55.000 2.24 0.00 36.36 5.01
441 442 0.836606 ACATGTGTATGATCCGGCCA 59.163 50.000 2.24 0.00 37.73 5.36
442 443 1.229428 CACATGTGTATGATCCGGCC 58.771 55.000 18.03 0.00 37.73 6.13
443 444 0.588252 GCACATGTGTATGATCCGGC 59.412 55.000 26.01 4.74 37.73 6.13
444 445 2.138320 GAGCACATGTGTATGATCCGG 58.862 52.381 26.01 0.00 37.73 5.14
445 446 2.798847 CTGAGCACATGTGTATGATCCG 59.201 50.000 26.01 9.97 37.73 4.18
446 447 2.547211 GCTGAGCACATGTGTATGATCC 59.453 50.000 26.01 8.36 37.73 3.36
447 448 3.200483 TGCTGAGCACATGTGTATGATC 58.800 45.455 26.01 16.10 37.73 2.92
448 449 3.271055 TGCTGAGCACATGTGTATGAT 57.729 42.857 26.01 8.32 37.73 2.45
449 450 2.766345 TGCTGAGCACATGTGTATGA 57.234 45.000 26.01 9.60 37.73 2.15
450 451 3.626217 AGATTGCTGAGCACATGTGTATG 59.374 43.478 26.01 14.82 38.71 2.39
451 452 3.875727 GAGATTGCTGAGCACATGTGTAT 59.124 43.478 26.01 15.70 38.71 2.29
452 453 3.264947 GAGATTGCTGAGCACATGTGTA 58.735 45.455 26.01 12.54 38.71 2.90
453 454 2.082231 GAGATTGCTGAGCACATGTGT 58.918 47.619 26.01 13.47 38.71 3.72
454 455 1.400846 GGAGATTGCTGAGCACATGTG 59.599 52.381 21.83 21.83 38.71 3.21
455 456 1.003928 TGGAGATTGCTGAGCACATGT 59.996 47.619 6.64 2.67 38.71 3.21
456 457 1.400846 GTGGAGATTGCTGAGCACATG 59.599 52.381 6.64 0.00 38.71 3.21
457 458 1.681166 GGTGGAGATTGCTGAGCACAT 60.681 52.381 6.64 4.07 38.71 3.21
458 459 0.321919 GGTGGAGATTGCTGAGCACA 60.322 55.000 6.64 0.00 38.71 4.57
459 460 0.321919 TGGTGGAGATTGCTGAGCAC 60.322 55.000 6.64 0.00 38.71 4.40
460 461 0.401356 TTGGTGGAGATTGCTGAGCA 59.599 50.000 1.40 1.40 36.47 4.26
461 462 0.807496 GTTGGTGGAGATTGCTGAGC 59.193 55.000 0.00 0.00 0.00 4.26
462 463 2.082231 CAGTTGGTGGAGATTGCTGAG 58.918 52.381 0.00 0.00 0.00 3.35
463 464 1.883638 GCAGTTGGTGGAGATTGCTGA 60.884 52.381 0.00 0.00 0.00 4.26
464 465 0.524862 GCAGTTGGTGGAGATTGCTG 59.475 55.000 0.00 0.00 0.00 4.41
465 466 0.610232 GGCAGTTGGTGGAGATTGCT 60.610 55.000 0.00 0.00 0.00 3.91
466 467 1.598701 GGGCAGTTGGTGGAGATTGC 61.599 60.000 0.00 0.00 0.00 3.56
467 468 0.038744 AGGGCAGTTGGTGGAGATTG 59.961 55.000 0.00 0.00 0.00 2.67
468 469 0.329596 GAGGGCAGTTGGTGGAGATT 59.670 55.000 0.00 0.00 0.00 2.40
469 470 1.566298 GGAGGGCAGTTGGTGGAGAT 61.566 60.000 0.00 0.00 0.00 2.75
470 471 2.224159 GGAGGGCAGTTGGTGGAGA 61.224 63.158 0.00 0.00 0.00 3.71
471 472 2.227036 AGGAGGGCAGTTGGTGGAG 61.227 63.158 0.00 0.00 0.00 3.86
472 473 2.121963 AGGAGGGCAGTTGGTGGA 60.122 61.111 0.00 0.00 0.00 4.02
473 474 1.856539 ATCAGGAGGGCAGTTGGTGG 61.857 60.000 0.00 0.00 0.00 4.61
474 475 0.679002 CATCAGGAGGGCAGTTGGTG 60.679 60.000 0.00 0.00 0.00 4.17
475 476 1.687612 CATCAGGAGGGCAGTTGGT 59.312 57.895 0.00 0.00 0.00 3.67
476 477 1.751927 GCATCAGGAGGGCAGTTGG 60.752 63.158 0.00 0.00 0.00 3.77
477 478 1.751927 GGCATCAGGAGGGCAGTTG 60.752 63.158 2.47 0.00 37.62 3.16
478 479 1.919600 GAGGCATCAGGAGGGCAGTT 61.920 60.000 10.11 0.00 40.30 3.16
479 480 2.285969 AGGCATCAGGAGGGCAGT 60.286 61.111 10.11 0.00 40.30 4.40
480 481 2.509916 GAGGCATCAGGAGGGCAG 59.490 66.667 10.11 0.00 40.30 4.85
481 482 3.092511 GGAGGCATCAGGAGGGCA 61.093 66.667 10.11 0.00 40.30 5.36
482 483 2.771762 AGGAGGCATCAGGAGGGC 60.772 66.667 0.00 0.00 37.98 5.19
483 484 0.984961 TTGAGGAGGCATCAGGAGGG 60.985 60.000 0.00 0.00 0.00 4.30
484 485 0.914644 TTTGAGGAGGCATCAGGAGG 59.085 55.000 0.00 0.00 0.00 4.30
485 486 1.741732 CGTTTGAGGAGGCATCAGGAG 60.742 57.143 0.00 0.00 0.00 3.69
486 487 0.250234 CGTTTGAGGAGGCATCAGGA 59.750 55.000 0.00 0.00 0.00 3.86
487 488 0.745845 CCGTTTGAGGAGGCATCAGG 60.746 60.000 0.00 0.00 0.00 3.86
488 489 2.772739 CCGTTTGAGGAGGCATCAG 58.227 57.895 0.00 0.00 0.00 2.90
495 496 2.027625 GTCACCGCCGTTTGAGGAG 61.028 63.158 0.00 0.00 0.00 3.69
496 497 2.029964 GTCACCGCCGTTTGAGGA 59.970 61.111 0.00 0.00 0.00 3.71
497 498 3.047877 GGTCACCGCCGTTTGAGG 61.048 66.667 0.00 0.00 0.00 3.86
498 499 2.030562 AGGTCACCGCCGTTTGAG 59.969 61.111 0.00 0.00 0.00 3.02
499 500 2.280524 CAGGTCACCGCCGTTTGA 60.281 61.111 0.00 0.00 0.00 2.69
500 501 1.890041 TTCAGGTCACCGCCGTTTG 60.890 57.895 0.00 0.00 0.00 2.93
501 502 1.890510 GTTCAGGTCACCGCCGTTT 60.891 57.895 0.00 0.00 0.00 3.60
502 503 2.280592 GTTCAGGTCACCGCCGTT 60.281 61.111 0.00 0.00 0.00 4.44
503 504 4.309950 GGTTCAGGTCACCGCCGT 62.310 66.667 0.00 0.00 0.00 5.68
504 505 3.605749 ATGGTTCAGGTCACCGCCG 62.606 63.158 0.00 0.00 37.07 6.46
505 506 1.745489 GATGGTTCAGGTCACCGCC 60.745 63.158 0.00 0.00 37.07 6.13
506 507 0.535335 TAGATGGTTCAGGTCACCGC 59.465 55.000 0.00 0.00 37.07 5.68
507 508 3.262420 CTTTAGATGGTTCAGGTCACCG 58.738 50.000 0.00 0.00 37.07 4.94
508 509 3.009143 ACCTTTAGATGGTTCAGGTCACC 59.991 47.826 0.00 0.00 31.92 4.02
509 510 4.287766 ACCTTTAGATGGTTCAGGTCAC 57.712 45.455 0.00 0.00 31.92 3.67
512 513 4.168101 TGAGACCTTTAGATGGTTCAGGT 58.832 43.478 0.00 0.00 40.75 4.00
513 514 4.826274 TGAGACCTTTAGATGGTTCAGG 57.174 45.455 0.00 0.00 38.03 3.86
514 515 6.047870 CAGATGAGACCTTTAGATGGTTCAG 58.952 44.000 0.00 0.00 38.03 3.02
515 516 5.627735 GCAGATGAGACCTTTAGATGGTTCA 60.628 44.000 0.00 0.00 38.03 3.18
516 517 4.813697 GCAGATGAGACCTTTAGATGGTTC 59.186 45.833 0.00 0.00 38.03 3.62
517 518 4.225942 TGCAGATGAGACCTTTAGATGGTT 59.774 41.667 0.00 0.00 38.03 3.67
518 519 3.776969 TGCAGATGAGACCTTTAGATGGT 59.223 43.478 0.00 0.00 41.07 3.55
519 520 4.412796 TGCAGATGAGACCTTTAGATGG 57.587 45.455 0.00 0.00 0.00 3.51
520 521 4.269603 CGTTGCAGATGAGACCTTTAGATG 59.730 45.833 0.00 0.00 0.00 2.90
521 522 4.437239 CGTTGCAGATGAGACCTTTAGAT 58.563 43.478 0.00 0.00 0.00 1.98
522 523 3.368427 CCGTTGCAGATGAGACCTTTAGA 60.368 47.826 0.00 0.00 0.00 2.10
523 524 2.932614 CCGTTGCAGATGAGACCTTTAG 59.067 50.000 0.00 0.00 0.00 1.85
524 525 2.565391 TCCGTTGCAGATGAGACCTTTA 59.435 45.455 0.00 0.00 0.00 1.85
525 526 1.347707 TCCGTTGCAGATGAGACCTTT 59.652 47.619 0.00 0.00 0.00 3.11
526 527 0.976641 TCCGTTGCAGATGAGACCTT 59.023 50.000 0.00 0.00 0.00 3.50
527 528 0.534412 CTCCGTTGCAGATGAGACCT 59.466 55.000 3.15 0.00 0.00 3.85
528 529 0.532573 TCTCCGTTGCAGATGAGACC 59.467 55.000 6.96 0.00 0.00 3.85
529 530 1.996191 GTTCTCCGTTGCAGATGAGAC 59.004 52.381 9.77 4.09 33.81 3.36
530 531 1.402852 CGTTCTCCGTTGCAGATGAGA 60.403 52.381 6.96 6.96 32.28 3.27
531 532 0.994995 CGTTCTCCGTTGCAGATGAG 59.005 55.000 2.92 2.92 0.00 2.90
532 533 0.601057 TCGTTCTCCGTTGCAGATGA 59.399 50.000 0.00 0.00 37.94 2.92
533 534 1.645034 ATCGTTCTCCGTTGCAGATG 58.355 50.000 0.00 0.00 37.94 2.90
534 535 3.130516 TCTTATCGTTCTCCGTTGCAGAT 59.869 43.478 0.00 0.00 37.94 2.90
535 536 2.490509 TCTTATCGTTCTCCGTTGCAGA 59.509 45.455 0.00 0.00 37.94 4.26
536 537 2.599082 GTCTTATCGTTCTCCGTTGCAG 59.401 50.000 0.00 0.00 37.94 4.41
537 538 2.602878 GTCTTATCGTTCTCCGTTGCA 58.397 47.619 0.00 0.00 37.94 4.08
538 539 1.582502 CGTCTTATCGTTCTCCGTTGC 59.417 52.381 0.00 0.00 37.94 4.17
539 540 2.182825 CCGTCTTATCGTTCTCCGTTG 58.817 52.381 0.00 0.00 37.94 4.10
540 541 1.468736 GCCGTCTTATCGTTCTCCGTT 60.469 52.381 0.00 0.00 37.94 4.44
541 542 0.100146 GCCGTCTTATCGTTCTCCGT 59.900 55.000 0.00 0.00 37.94 4.69
542 543 0.099968 TGCCGTCTTATCGTTCTCCG 59.900 55.000 0.00 0.00 38.13 4.63
543 544 1.841450 CTGCCGTCTTATCGTTCTCC 58.159 55.000 0.00 0.00 0.00 3.71
544 545 1.201343 GCTGCCGTCTTATCGTTCTC 58.799 55.000 0.00 0.00 0.00 2.87
545 546 0.818296 AGCTGCCGTCTTATCGTTCT 59.182 50.000 0.00 0.00 0.00 3.01
546 547 1.201343 GAGCTGCCGTCTTATCGTTC 58.799 55.000 0.00 0.00 0.00 3.95
547 548 0.818296 AGAGCTGCCGTCTTATCGTT 59.182 50.000 0.00 0.00 0.00 3.85
548 549 0.818296 AAGAGCTGCCGTCTTATCGT 59.182 50.000 0.00 0.00 32.29 3.73
549 550 1.203928 CAAGAGCTGCCGTCTTATCG 58.796 55.000 0.00 0.00 32.81 2.92
550 551 1.576356 CCAAGAGCTGCCGTCTTATC 58.424 55.000 0.00 0.00 32.81 1.75
551 552 0.462759 GCCAAGAGCTGCCGTCTTAT 60.463 55.000 0.00 0.00 38.99 1.73
552 553 1.079127 GCCAAGAGCTGCCGTCTTA 60.079 57.895 0.00 0.00 38.99 2.10
553 554 2.359230 GCCAAGAGCTGCCGTCTT 60.359 61.111 0.00 0.00 38.99 3.01
562 563 1.609208 TTCCTCACAAAGCCAAGAGC 58.391 50.000 0.00 0.00 44.25 4.09
563 564 3.885297 TCTTTTCCTCACAAAGCCAAGAG 59.115 43.478 0.00 0.00 32.17 2.85
564 565 3.885297 CTCTTTTCCTCACAAAGCCAAGA 59.115 43.478 0.00 0.00 32.17 3.02
565 566 3.885297 TCTCTTTTCCTCACAAAGCCAAG 59.115 43.478 0.00 0.00 32.17 3.61
566 567 3.632145 GTCTCTTTTCCTCACAAAGCCAA 59.368 43.478 0.00 0.00 32.17 4.52
567 568 3.214328 GTCTCTTTTCCTCACAAAGCCA 58.786 45.455 0.00 0.00 32.17 4.75
568 569 2.224314 CGTCTCTTTTCCTCACAAAGCC 59.776 50.000 0.00 0.00 32.17 4.35
569 570 3.131396 TCGTCTCTTTTCCTCACAAAGC 58.869 45.455 0.00 0.00 32.17 3.51
570 571 4.372656 ACTCGTCTCTTTTCCTCACAAAG 58.627 43.478 0.00 0.00 33.22 2.77
571 572 4.369182 GACTCGTCTCTTTTCCTCACAAA 58.631 43.478 0.00 0.00 0.00 2.83
572 573 3.550233 CGACTCGTCTCTTTTCCTCACAA 60.550 47.826 0.00 0.00 0.00 3.33
573 574 2.031069 CGACTCGTCTCTTTTCCTCACA 60.031 50.000 0.00 0.00 0.00 3.58
574 575 2.225963 TCGACTCGTCTCTTTTCCTCAC 59.774 50.000 0.00 0.00 0.00 3.51
575 576 2.501261 TCGACTCGTCTCTTTTCCTCA 58.499 47.619 0.00 0.00 0.00 3.86
576 577 3.768468 ATCGACTCGTCTCTTTTCCTC 57.232 47.619 0.00 0.00 0.00 3.71
577 578 4.142425 GGTTATCGACTCGTCTCTTTTCCT 60.142 45.833 0.00 0.00 0.00 3.36
578 579 4.104066 GGTTATCGACTCGTCTCTTTTCC 58.896 47.826 0.00 0.00 0.00 3.13
579 580 4.104066 GGGTTATCGACTCGTCTCTTTTC 58.896 47.826 0.00 0.00 0.00 2.29
580 581 3.508793 TGGGTTATCGACTCGTCTCTTTT 59.491 43.478 0.00 0.00 0.00 2.27
581 582 3.087031 TGGGTTATCGACTCGTCTCTTT 58.913 45.455 0.00 0.00 0.00 2.52
582 583 2.719739 TGGGTTATCGACTCGTCTCTT 58.280 47.619 0.00 0.00 0.00 2.85
583 584 2.414994 TGGGTTATCGACTCGTCTCT 57.585 50.000 0.00 0.00 0.00 3.10
584 585 3.372954 CATTGGGTTATCGACTCGTCTC 58.627 50.000 0.00 0.00 0.00 3.36
585 586 2.481449 GCATTGGGTTATCGACTCGTCT 60.481 50.000 0.00 0.00 0.00 4.18
586 587 1.859080 GCATTGGGTTATCGACTCGTC 59.141 52.381 0.00 0.00 0.00 4.20
587 588 1.206132 TGCATTGGGTTATCGACTCGT 59.794 47.619 0.00 0.00 0.00 4.18
588 589 1.860950 CTGCATTGGGTTATCGACTCG 59.139 52.381 0.00 0.00 0.00 4.18
589 590 3.179443 TCTGCATTGGGTTATCGACTC 57.821 47.619 0.00 0.00 0.00 3.36
590 591 3.627395 TTCTGCATTGGGTTATCGACT 57.373 42.857 0.00 0.00 0.00 4.18
591 592 4.261197 GGATTTCTGCATTGGGTTATCGAC 60.261 45.833 0.00 0.00 0.00 4.20
592 593 3.882888 GGATTTCTGCATTGGGTTATCGA 59.117 43.478 0.00 0.00 0.00 3.59
593 594 3.303990 CGGATTTCTGCATTGGGTTATCG 60.304 47.826 0.00 0.00 0.00 2.92
594 595 3.632145 ACGGATTTCTGCATTGGGTTATC 59.368 43.478 0.00 0.00 0.00 1.75
595 596 3.631250 ACGGATTTCTGCATTGGGTTAT 58.369 40.909 0.00 0.00 0.00 1.89
596 597 3.013921 GACGGATTTCTGCATTGGGTTA 58.986 45.455 0.00 0.00 0.00 2.85
597 598 1.818674 GACGGATTTCTGCATTGGGTT 59.181 47.619 0.00 0.00 0.00 4.11
598 599 1.004745 AGACGGATTTCTGCATTGGGT 59.995 47.619 0.00 0.00 0.00 4.51
599 600 1.402968 CAGACGGATTTCTGCATTGGG 59.597 52.381 0.00 0.00 36.83 4.12
600 601 2.838386 CAGACGGATTTCTGCATTGG 57.162 50.000 0.00 0.00 36.83 3.16
606 607 1.126846 GTGTTCGCAGACGGATTTCTG 59.873 52.381 0.00 0.00 45.15 3.02
607 608 1.000955 AGTGTTCGCAGACGGATTTCT 59.999 47.619 0.00 0.00 40.63 2.52
608 609 1.126846 CAGTGTTCGCAGACGGATTTC 59.873 52.381 0.00 0.00 40.63 2.17
609 610 1.148310 CAGTGTTCGCAGACGGATTT 58.852 50.000 0.00 0.00 40.63 2.17
610 611 0.670546 CCAGTGTTCGCAGACGGATT 60.671 55.000 0.00 0.00 40.63 3.01
611 612 1.079819 CCAGTGTTCGCAGACGGAT 60.080 57.895 0.00 0.00 40.63 4.18
612 613 2.142357 CTCCAGTGTTCGCAGACGGA 62.142 60.000 0.00 0.00 40.63 4.69
613 614 1.734477 CTCCAGTGTTCGCAGACGG 60.734 63.158 0.00 0.00 40.63 4.79
614 615 0.240145 TACTCCAGTGTTCGCAGACG 59.760 55.000 0.00 0.00 42.01 4.18
615 616 2.433868 TTACTCCAGTGTTCGCAGAC 57.566 50.000 0.00 0.00 34.32 3.51
616 617 3.678056 ATTTACTCCAGTGTTCGCAGA 57.322 42.857 0.00 0.00 0.00 4.26
617 618 3.307242 GCTATTTACTCCAGTGTTCGCAG 59.693 47.826 0.00 0.00 0.00 5.18
618 619 3.259064 GCTATTTACTCCAGTGTTCGCA 58.741 45.455 0.00 0.00 0.00 5.10
619 620 3.259064 TGCTATTTACTCCAGTGTTCGC 58.741 45.455 0.00 0.00 0.00 4.70
620 621 5.856126 TTTGCTATTTACTCCAGTGTTCG 57.144 39.130 0.00 0.00 0.00 3.95
865 869 2.987437 TGGGGTATTTACACTGGTTCCA 59.013 45.455 0.00 0.00 0.00 3.53
874 878 1.562475 GAGCAGGGTGGGGTATTTACA 59.438 52.381 0.00 0.00 0.00 2.41
980 1034 2.049433 CGGCAAGGAAGTCGACGT 60.049 61.111 10.46 6.85 39.34 4.34
1209 1293 6.909550 ATAGAGATGAACCCTAGCTTACAG 57.090 41.667 0.00 0.00 0.00 2.74
1363 1456 1.192146 GGGCTCCACAGTGGTGTCTA 61.192 60.000 22.48 2.22 43.71 2.59
1384 1477 1.000938 GCTCAAGTTGGCCACAGAAAG 60.001 52.381 3.88 1.55 0.00 2.62
1497 1590 1.951209 TGGCATCTAACCTGGACTGA 58.049 50.000 0.00 0.00 0.00 3.41
1546 1639 4.895224 AGTGCTGCATCATATCAAACAG 57.105 40.909 5.27 0.00 0.00 3.16
2192 2347 4.968719 TCAACATCCTTCATAGCCTTCCTA 59.031 41.667 0.00 0.00 0.00 2.94
2332 2700 4.697352 ACATATCACAGCAAGTTGAAGACC 59.303 41.667 7.16 0.00 0.00 3.85
2441 2809 9.485206 TCTTACACTAGGTTAAACTTCACATTC 57.515 33.333 0.00 0.00 0.00 2.67
2782 3200 4.101448 GGCGGCTGGTGGAGTCAT 62.101 66.667 0.00 0.00 0.00 3.06
2803 3229 5.590663 GGATCCATCTGTAGGGTTTCTTTTC 59.409 44.000 6.95 0.00 0.00 2.29
2869 3299 1.139654 CTGCTGCTGCTATCCTAACCA 59.860 52.381 17.00 0.00 40.48 3.67
2878 3308 1.079336 CTCTGTGCTGCTGCTGCTA 60.079 57.895 27.67 17.43 40.48 3.49
2991 3439 5.624344 AGTTCTTCATCATTGCACTTCTG 57.376 39.130 0.00 0.00 0.00 3.02
3355 3880 6.656632 TTTCAGTCAGTGTATCTTCTGTCT 57.343 37.500 0.00 0.00 32.32 3.41
3383 3965 5.239306 GTCATTCCTGTGTTGATTCAGTCAA 59.761 40.000 0.00 0.00 44.36 3.18
3710 4296 2.936919 ACACCAGATCTTCAAGTGCA 57.063 45.000 10.41 0.00 31.58 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.