Multiple sequence alignment - TraesCS1D01G320200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G320200 chr1D 100.000 6986 0 0 1 6986 414288722 414281737 0.000000e+00 12901.0
1 TraesCS1D01G320200 chr1D 92.308 169 12 1 651 818 427825882 427826050 9.060000e-59 239.0
2 TraesCS1D01G320200 chr1A 94.034 2447 78 30 818 3215 511015618 511013191 0.000000e+00 3648.0
3 TraesCS1D01G320200 chr1A 95.126 1662 42 12 4356 5994 511010942 511009297 0.000000e+00 2584.0
4 TraesCS1D01G320200 chr1A 92.731 1073 56 10 3223 4280 511013023 511011958 0.000000e+00 1530.0
5 TraesCS1D01G320200 chr1A 88.559 673 31 14 1 653 511016255 511015609 0.000000e+00 774.0
6 TraesCS1D01G320200 chr1A 88.000 450 43 6 5993 6432 511009152 511008704 8.030000e-144 521.0
7 TraesCS1D01G320200 chr1A 90.000 240 20 4 6606 6842 511008711 511008473 2.450000e-79 307.0
8 TraesCS1D01G320200 chr1A 94.149 188 10 1 4292 4479 511011384 511011198 1.150000e-72 285.0
9 TraesCS1D01G320200 chr1A 93.064 173 11 1 646 818 584997116 584996945 1.160000e-62 252.0
10 TraesCS1D01G320200 chr1A 93.452 168 11 0 654 821 59945358 59945191 4.180000e-62 250.0
11 TraesCS1D01G320200 chr1A 100.000 39 0 0 4292 4330 511010983 511010945 9.720000e-09 73.1
12 TraesCS1D01G320200 chr1B 91.208 2218 112 41 1633 3806 559097751 559095573 0.000000e+00 2939.0
13 TraesCS1D01G320200 chr1B 95.679 1643 41 9 4376 5994 559093816 559092180 0.000000e+00 2614.0
14 TraesCS1D01G320200 chr1B 96.716 883 25 3 668 1547 559098633 559097752 0.000000e+00 1467.0
15 TraesCS1D01G320200 chr1B 93.445 656 23 9 1 636 559099285 559098630 0.000000e+00 955.0
16 TraesCS1D01G320200 chr1B 94.266 436 21 4 3847 4280 559095338 559094905 0.000000e+00 664.0
17 TraesCS1D01G320200 chr1B 88.783 419 40 5 6020 6432 559075574 559075157 2.250000e-139 507.0
18 TraesCS1D01G320200 chr1B 90.345 145 11 3 6659 6800 559074941 559074797 3.330000e-43 187.0
19 TraesCS1D01G320200 chr5D 88.221 416 26 5 5377 5779 244404411 244404006 6.340000e-130 475.0
20 TraesCS1D01G320200 chr5D 86.772 189 22 3 3312 3497 397198171 397198359 2.550000e-49 207.0
21 TraesCS1D01G320200 chr4B 87.441 422 24 6 5377 5779 642693746 642694157 6.390000e-125 459.0
22 TraesCS1D01G320200 chr7D 84.878 410 21 12 5380 5779 246402851 246402473 6.620000e-100 375.0
23 TraesCS1D01G320200 chr7D 84.211 247 28 8 2179 2418 169915309 169915067 5.450000e-56 230.0
24 TraesCS1D01G320200 chr7D 82.692 260 37 8 2179 2434 504174818 504175073 2.540000e-54 224.0
25 TraesCS1D01G320200 chr7D 92.308 156 12 0 6450 6605 109369264 109369419 9.120000e-54 222.0
26 TraesCS1D01G320200 chr7D 83.810 210 28 5 3297 3503 591004203 591003997 1.990000e-45 195.0
27 TraesCS1D01G320200 chr2B 85.669 314 36 7 6122 6429 282055547 282055857 8.740000e-84 322.0
28 TraesCS1D01G320200 chr2B 82.468 308 44 9 2186 2488 91257426 91257728 1.930000e-65 261.0
29 TraesCS1D01G320200 chr5B 85.667 300 37 5 6133 6429 414955990 414956286 1.890000e-80 311.0
30 TraesCS1D01G320200 chr2A 83.492 315 38 9 2181 2488 59557957 59557650 1.480000e-71 281.0
31 TraesCS1D01G320200 chr4A 93.567 171 10 1 648 818 742423808 742423977 3.230000e-63 254.0
32 TraesCS1D01G320200 chr4A 82.645 242 34 5 3266 3503 718416390 718416153 2.550000e-49 207.0
33 TraesCS1D01G320200 chr4A 88.136 59 4 3 3763 3819 625284426 625284483 4.520000e-07 67.6
34 TraesCS1D01G320200 chr2D 81.935 310 42 9 2186 2488 58777671 58777973 4.180000e-62 250.0
35 TraesCS1D01G320200 chr2D 91.975 162 13 0 657 818 639533856 639533695 1.960000e-55 228.0
36 TraesCS1D01G320200 chr7B 91.908 173 12 2 647 818 746157759 746157588 2.520000e-59 241.0
37 TraesCS1D01G320200 chr7B 83.806 247 29 8 2179 2418 135582453 135582211 2.540000e-54 224.0
38 TraesCS1D01G320200 chr7B 82.510 263 32 12 2179 2434 532275758 532276013 1.180000e-52 219.0
39 TraesCS1D01G320200 chr7B 84.615 208 25 5 3266 3469 654972826 654972622 4.270000e-47 200.0
40 TraesCS1D01G320200 chr3A 92.771 166 9 2 655 818 568682330 568682494 3.260000e-58 237.0
41 TraesCS1D01G320200 chr3D 92.121 165 13 0 654 818 609241892 609241728 4.210000e-57 233.0
42 TraesCS1D01G320200 chr7A 84.211 247 28 8 2179 2418 172469143 172468901 5.450000e-56 230.0
43 TraesCS1D01G320200 chr7A 82.129 263 33 12 2179 2434 571701713 571701968 5.490000e-51 213.0
44 TraesCS1D01G320200 chr4D 84.454 238 26 7 3266 3495 8648749 8648515 2.540000e-54 224.0
45 TraesCS1D01G320200 chr4D 82.008 239 34 7 3266 3503 504326751 504326521 1.990000e-45 195.0
46 TraesCS1D01G320200 chr3B 82.906 234 32 7 3266 3497 3019401 3019628 3.300000e-48 204.0
47 TraesCS1D01G320200 chr5A 81.974 233 32 8 3272 3503 651856903 651856680 9.250000e-44 189.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G320200 chr1D 414281737 414288722 6985 True 12901.0000 12901 100.000000 1 6986 1 chr1D.!!$R1 6985
1 TraesCS1D01G320200 chr1A 511008473 511016255 7782 True 1215.2625 3648 92.824875 1 6842 8 chr1A.!!$R3 6841
2 TraesCS1D01G320200 chr1B 559092180 559099285 7105 True 1727.8000 2939 94.262800 1 5994 5 chr1B.!!$R2 5993
3 TraesCS1D01G320200 chr1B 559074797 559075574 777 True 347.0000 507 89.564000 6020 6800 2 chr1B.!!$R1 780

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
685 731 0.046397 ATGCTCCCTCTTACCCCCTT 59.954 55.000 0.00 0.0 0.00 3.95 F
1320 1370 3.189910 TCAGTGAGTACGCGTCATAGTTT 59.810 43.478 18.63 0.0 0.00 2.66 F
2671 2767 0.036010 TTTCCAGTCTGCTGCTAGCC 60.036 55.000 13.29 0.0 41.51 3.93 F
2688 2784 0.179129 GCCGCCGCTACAGTACTTAA 60.179 55.000 0.00 0.0 0.00 1.85 F
2715 2811 0.465824 GATCTCAATGCCTGCCTGCT 60.466 55.000 0.00 0.0 0.00 4.24 F
3117 3214 1.104577 GCTCTCTCCCACCTACCTCG 61.105 65.000 0.00 0.0 0.00 4.63 F
4104 4582 1.151908 CCTGTCCAAAACCCCCGAA 59.848 57.895 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1679 1734 0.109342 CCATCAAATCCCCGGAGAGG 59.891 60.000 0.73 0.0 40.63 3.69 R
2804 2900 0.107993 GCAGCATGGACTAGCAGTGA 60.108 55.000 0.00 0.0 35.86 3.41 R
4608 6465 0.320683 TGGAGGTGTGCACGATCTTG 60.321 55.000 13.13 0.0 0.00 3.02 R
4931 6788 1.277842 TGTACATGATGGCCACGAACT 59.722 47.619 8.16 0.0 0.00 3.01 R
5151 7008 1.482955 CTTGACGCACACGAAGACG 59.517 57.895 0.00 0.0 43.93 4.18 R
5511 7377 1.299850 CAGCGTGTCCGACTTGTCA 60.300 57.895 0.00 0.0 35.63 3.58 R
6475 8518 0.104934 AGGGGGCGATGGAGAGTATT 60.105 55.000 0.00 0.0 0.00 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
230 231 3.551863 GGCGTCCTAGAGTCATGAGATTG 60.552 52.174 0.00 0.00 0.00 2.67
240 241 3.265791 GTCATGAGATTGACTGGTGGTC 58.734 50.000 0.00 0.00 42.22 4.02
270 295 5.711976 ACAAAGGTTGAAGAATATCTGGTGG 59.288 40.000 0.00 0.00 0.00 4.61
271 296 5.520748 AAGGTTGAAGAATATCTGGTGGT 57.479 39.130 0.00 0.00 0.00 4.16
272 297 4.848357 AGGTTGAAGAATATCTGGTGGTG 58.152 43.478 0.00 0.00 0.00 4.17
273 298 3.378427 GGTTGAAGAATATCTGGTGGTGC 59.622 47.826 0.00 0.00 0.00 5.01
274 299 4.265073 GTTGAAGAATATCTGGTGGTGCT 58.735 43.478 0.00 0.00 0.00 4.40
275 300 5.428253 GTTGAAGAATATCTGGTGGTGCTA 58.572 41.667 0.00 0.00 0.00 3.49
276 301 5.894298 TGAAGAATATCTGGTGGTGCTAT 57.106 39.130 0.00 0.00 0.00 2.97
277 302 5.858381 TGAAGAATATCTGGTGGTGCTATC 58.142 41.667 0.00 0.00 0.00 2.08
278 303 4.899352 AGAATATCTGGTGGTGCTATCC 57.101 45.455 0.00 0.00 0.00 2.59
279 304 3.584848 AGAATATCTGGTGGTGCTATCCC 59.415 47.826 0.00 0.00 0.00 3.85
280 305 2.795291 TATCTGGTGGTGCTATCCCT 57.205 50.000 0.00 0.00 0.00 4.20
281 306 2.795291 ATCTGGTGGTGCTATCCCTA 57.205 50.000 0.00 0.00 0.00 3.53
282 307 2.561209 TCTGGTGGTGCTATCCCTAA 57.439 50.000 0.00 0.00 0.00 2.69
283 308 2.398588 TCTGGTGGTGCTATCCCTAAG 58.601 52.381 0.00 0.00 0.00 2.18
284 309 2.023404 TCTGGTGGTGCTATCCCTAAGA 60.023 50.000 0.00 0.00 0.00 2.10
285 310 2.975489 CTGGTGGTGCTATCCCTAAGAT 59.025 50.000 0.00 0.00 39.15 2.40
286 311 2.705658 TGGTGGTGCTATCCCTAAGATG 59.294 50.000 0.00 0.00 36.33 2.90
287 312 2.551071 GGTGGTGCTATCCCTAAGATGC 60.551 54.545 0.00 0.00 36.33 3.91
288 313 2.104792 GTGGTGCTATCCCTAAGATGCA 59.895 50.000 0.00 0.00 36.96 3.96
289 314 2.981784 TGGTGCTATCCCTAAGATGCAT 59.018 45.455 0.00 0.00 39.52 3.96
290 315 3.244665 TGGTGCTATCCCTAAGATGCATG 60.245 47.826 2.46 0.00 39.52 4.06
291 316 3.341823 GTGCTATCCCTAAGATGCATGG 58.658 50.000 2.46 0.00 39.52 3.66
292 317 2.981784 TGCTATCCCTAAGATGCATGGT 59.018 45.455 2.46 0.00 35.47 3.55
293 318 3.244665 TGCTATCCCTAAGATGCATGGTG 60.245 47.826 2.46 0.00 35.47 4.17
439 481 5.392272 GGTGGTACCTATTTAAAAAGTGCCG 60.392 44.000 14.36 0.00 36.15 5.69
554 599 2.366640 AGCTCTTGGGTCTAGCGATA 57.633 50.000 0.00 0.00 41.19 2.92
649 695 7.221067 CGTAGGTAGTGCTATTTCTTCTTCTTG 59.779 40.741 0.00 0.00 0.00 3.02
650 696 7.010339 AGGTAGTGCTATTTCTTCTTCTTGT 57.990 36.000 0.00 0.00 0.00 3.16
651 697 8.135382 AGGTAGTGCTATTTCTTCTTCTTGTA 57.865 34.615 0.00 0.00 0.00 2.41
652 698 8.763601 AGGTAGTGCTATTTCTTCTTCTTGTAT 58.236 33.333 0.00 0.00 0.00 2.29
653 699 8.821894 GGTAGTGCTATTTCTTCTTCTTGTATG 58.178 37.037 0.00 0.00 0.00 2.39
654 700 9.587772 GTAGTGCTATTTCTTCTTCTTGTATGA 57.412 33.333 0.00 0.00 0.00 2.15
655 701 8.715191 AGTGCTATTTCTTCTTCTTGTATGAG 57.285 34.615 0.00 0.00 0.00 2.90
656 702 7.279758 AGTGCTATTTCTTCTTCTTGTATGAGC 59.720 37.037 0.00 0.00 0.00 4.26
657 703 7.065085 GTGCTATTTCTTCTTCTTGTATGAGCA 59.935 37.037 0.00 0.00 0.00 4.26
658 704 7.279536 TGCTATTTCTTCTTCTTGTATGAGCAG 59.720 37.037 0.00 0.00 0.00 4.24
659 705 7.279758 GCTATTTCTTCTTCTTGTATGAGCAGT 59.720 37.037 0.00 0.00 0.00 4.40
660 706 7.992754 ATTTCTTCTTCTTGTATGAGCAGTT 57.007 32.000 0.00 0.00 0.00 3.16
661 707 7.807977 TTTCTTCTTCTTGTATGAGCAGTTT 57.192 32.000 0.00 0.00 0.00 2.66
662 708 7.807977 TTCTTCTTCTTGTATGAGCAGTTTT 57.192 32.000 0.00 0.00 0.00 2.43
663 709 8.902540 TTCTTCTTCTTGTATGAGCAGTTTTA 57.097 30.769 0.00 0.00 0.00 1.52
664 710 8.539770 TCTTCTTCTTGTATGAGCAGTTTTAG 57.460 34.615 0.00 0.00 0.00 1.85
665 711 6.727824 TCTTCTTGTATGAGCAGTTTTAGC 57.272 37.500 0.00 0.00 0.00 3.09
666 712 6.230472 TCTTCTTGTATGAGCAGTTTTAGCA 58.770 36.000 0.00 0.00 0.00 3.49
667 713 6.881065 TCTTCTTGTATGAGCAGTTTTAGCAT 59.119 34.615 0.00 0.00 0.00 3.79
668 714 6.426980 TCTTGTATGAGCAGTTTTAGCATG 57.573 37.500 0.00 0.00 0.00 4.06
669 715 4.621068 TGTATGAGCAGTTTTAGCATGC 57.379 40.909 10.51 10.51 40.29 4.06
685 731 0.046397 ATGCTCCCTCTTACCCCCTT 59.954 55.000 0.00 0.00 0.00 3.95
739 785 4.200838 TCTGAGCCGTTGATCACATTAA 57.799 40.909 0.00 0.00 32.50 1.40
743 789 6.257849 TCTGAGCCGTTGATCACATTAATTAC 59.742 38.462 0.00 0.00 32.50 1.89
745 791 7.269316 TGAGCCGTTGATCACATTAATTACTA 58.731 34.615 0.00 0.00 30.48 1.82
796 842 7.366551 CCTCATATGTAAAAAGAGGGGGTAAGT 60.367 40.741 1.90 0.00 41.65 2.24
995 1041 5.670485 ACTCTGCGATACCACAATATCAAA 58.330 37.500 0.00 0.00 31.98 2.69
1320 1370 3.189910 TCAGTGAGTACGCGTCATAGTTT 59.810 43.478 18.63 0.00 0.00 2.66
1535 1585 6.070653 AGGCTTTCAATTGCAAGAATCCATTA 60.071 34.615 20.11 0.00 0.00 1.90
1569 1619 6.770785 GGTCTAGGCATATGACCAACAATAAA 59.229 38.462 16.90 0.00 46.79 1.40
1601 1656 4.704540 TGTTCTACCATATTTGTGCCAAGG 59.295 41.667 0.00 0.00 0.00 3.61
1679 1734 0.475828 ACTATATGTGCCCCTCCCCC 60.476 60.000 0.00 0.00 0.00 5.40
1709 1770 5.395546 CGGGGATTTGATGGAAATGTTGATT 60.396 40.000 0.00 0.00 34.18 2.57
1815 1876 0.257039 GGACACTTGGATGGATGGCT 59.743 55.000 0.00 0.00 0.00 4.75
2075 2137 6.923508 AGCTCAATATGATGAACATGCAAATG 59.076 34.615 0.00 0.00 39.77 2.32
2088 2150 6.012658 ACATGCAAATGTAAACAGTCGATT 57.987 33.333 0.00 0.00 32.14 3.34
2090 2152 4.225984 TGCAAATGTAAACAGTCGATTGC 58.774 39.130 7.97 6.95 41.56 3.56
2091 2153 3.297979 GCAAATGTAAACAGTCGATTGCG 59.702 43.478 7.97 0.00 33.54 4.85
2095 2174 2.063266 GTAAACAGTCGATTGCGGTGA 58.937 47.619 7.97 0.00 38.28 4.02
2111 2190 1.461127 GGTGATCGATTGCTATTCGCC 59.539 52.381 0.00 0.00 38.05 5.54
2113 2192 2.738846 GTGATCGATTGCTATTCGCCAT 59.261 45.455 0.00 0.00 38.05 4.40
2114 2193 3.187227 GTGATCGATTGCTATTCGCCATT 59.813 43.478 0.00 0.00 38.05 3.16
2115 2194 3.187022 TGATCGATTGCTATTCGCCATTG 59.813 43.478 0.00 0.00 38.05 2.82
2117 2196 2.802247 TCGATTGCTATTCGCCATTGAG 59.198 45.455 0.00 0.00 38.05 3.02
2144 2226 1.753930 AATTGACGATGGATGCTGCA 58.246 45.000 4.13 4.13 0.00 4.41
2146 2228 0.745486 TTGACGATGGATGCTGCAGG 60.745 55.000 17.12 0.00 0.00 4.85
2265 2347 3.626924 AAGAGCACCTTCGCCGGT 61.627 61.111 1.90 0.00 37.93 5.28
2663 2759 1.279840 GTGCGTGTTTCCAGTCTGC 59.720 57.895 0.00 0.00 0.00 4.26
2668 2764 1.605457 CGTGTTTCCAGTCTGCTGCTA 60.605 52.381 0.00 0.00 41.26 3.49
2669 2765 2.072298 GTGTTTCCAGTCTGCTGCTAG 58.928 52.381 0.00 0.00 41.26 3.42
2671 2767 0.036010 TTTCCAGTCTGCTGCTAGCC 60.036 55.000 13.29 0.00 41.51 3.93
2673 2769 2.889503 CAGTCTGCTGCTAGCCGC 60.890 66.667 22.71 22.71 41.51 6.53
2680 2776 4.207281 CTGCTAGCCGCCGCTACA 62.207 66.667 13.29 6.06 46.08 2.74
2681 2777 4.207281 TGCTAGCCGCCGCTACAG 62.207 66.667 13.29 0.00 46.08 2.74
2685 2781 1.445716 CTAGCCGCCGCTACAGTACT 61.446 60.000 2.40 0.00 46.08 2.73
2688 2784 0.179129 GCCGCCGCTACAGTACTTAA 60.179 55.000 0.00 0.00 0.00 1.85
2693 2789 4.498682 CCGCCGCTACAGTACTTAATTACT 60.499 45.833 0.00 0.00 32.16 2.24
2713 2809 1.758936 TTGATCTCAATGCCTGCCTG 58.241 50.000 0.00 0.00 0.00 4.85
2714 2810 0.750546 TGATCTCAATGCCTGCCTGC 60.751 55.000 0.00 0.00 0.00 4.85
2715 2811 0.465824 GATCTCAATGCCTGCCTGCT 60.466 55.000 0.00 0.00 0.00 4.24
2766 2862 1.901948 TCGTTCTCCGGTCTGCAGT 60.902 57.895 14.67 0.00 37.11 4.40
2804 2900 1.301716 AAACGGTGAGTGCTCGCAT 60.302 52.632 13.77 0.00 41.60 4.73
3117 3214 1.104577 GCTCTCTCCCACCTACCTCG 61.105 65.000 0.00 0.00 0.00 4.63
3173 3270 4.767255 GCACTCGGAGGGGTGCTG 62.767 72.222 9.71 0.00 46.97 4.41
3461 3723 6.754193 TCAAAGTTTGTGAGGTTTGACTTTT 58.246 32.000 15.08 0.00 35.75 2.27
3489 3751 5.673337 AAGTTGTATGCGCTACATTATGG 57.327 39.130 9.73 0.00 40.02 2.74
3689 3963 5.611796 TGGCGTCATGATAATTAAGCATC 57.388 39.130 0.00 0.00 0.00 3.91
3712 3986 3.499918 CAGCTTGGTTAAGAGGTCAACTG 59.500 47.826 0.00 0.00 35.92 3.16
3749 4023 7.775093 CGGGTCATAATGGGAAATATCATACAT 59.225 37.037 0.00 0.00 0.00 2.29
3885 4362 7.147915 ACCACATCATCCATTATTTTACACACC 60.148 37.037 0.00 0.00 0.00 4.16
3896 4373 7.754851 TTATTTTACACACCTCCTTTCTTCC 57.245 36.000 0.00 0.00 0.00 3.46
3901 4378 3.325135 ACACACCTCCTTTCTTCCACTAG 59.675 47.826 0.00 0.00 0.00 2.57
4104 4582 1.151908 CCTGTCCAAAACCCCCGAA 59.848 57.895 0.00 0.00 0.00 4.30
4134 4612 5.815233 TCCACTTCATCTTCTTCAAGTCT 57.185 39.130 0.00 0.00 0.00 3.24
4244 4722 5.637810 CGCTAATAAACTGAAGTTGACTCCA 59.362 40.000 0.00 0.00 38.44 3.86
4290 4768 8.642908 ATTGAAGTTGTACTTGTTTAAAAGCC 57.357 30.769 0.00 0.00 38.80 4.35
4341 5384 4.454504 CCAAAAGGCTTACGAGAAAAGCTA 59.545 41.667 0.00 0.00 46.81 3.32
4363 5406 3.926058 AGAGGAGGCGGCTTATTTTTA 57.074 42.857 14.76 0.00 0.00 1.52
4374 5417 6.020984 GCGGCTTATTTTTAAAATTGCCAAG 58.979 36.000 28.37 18.95 39.09 3.61
4382 5425 6.843069 TTTTAAAATTGCCAAGAGAACTGC 57.157 33.333 0.00 0.00 0.00 4.40
4440 5918 6.255670 TCAAAGTGTCTATTATGACGATGCAC 59.744 38.462 0.00 0.00 39.64 4.57
4470 6327 1.942657 GTGTGATCCCGACATGAATGG 59.057 52.381 0.00 0.00 0.00 3.16
4690 6547 1.588403 CTCATGCTCGTCTGCCTCG 60.588 63.158 0.00 0.00 0.00 4.63
5151 7008 3.050275 GCGTTCCACCAGGTGCTC 61.050 66.667 14.98 5.53 35.89 4.26
5154 7011 1.668151 GTTCCACCAGGTGCTCGTC 60.668 63.158 14.98 0.00 35.89 4.20
5278 7135 1.585521 CGCTACGGCTACAAGGACG 60.586 63.158 0.00 0.00 44.24 4.79
5758 7627 3.601435 TCCAACGTGTTCAAGAAGTTCA 58.399 40.909 5.50 0.00 0.00 3.18
5862 7731 4.072839 TCGAAGTCGGCATGATCTACTAT 58.927 43.478 0.00 0.00 40.29 2.12
5877 7746 4.974399 TCTACTATGTCTAGCTGCTAGCA 58.026 43.478 27.72 26.21 45.56 3.49
5913 7791 6.578163 TTCATTACATATGTGGATGCATGG 57.422 37.500 18.81 1.37 0.00 3.66
5922 7800 5.779529 ATGTGGATGCATGGATTAAACTC 57.220 39.130 2.46 0.00 0.00 3.01
5937 7815 8.429641 TGGATTAAACTCCAGATAACATACTCC 58.570 37.037 0.00 0.00 40.43 3.85
5938 7816 8.652290 GGATTAAACTCCAGATAACATACTCCT 58.348 37.037 0.00 0.00 35.24 3.69
5977 7863 7.185453 GTCAAGACATGAATAATCAAGAGCAC 58.815 38.462 0.00 0.00 40.50 4.40
6017 8049 6.545504 TGTCAAGAATCTTAGACTTTGCAC 57.454 37.500 18.85 1.78 32.41 4.57
6018 8050 5.177511 TGTCAAGAATCTTAGACTTTGCACG 59.822 40.000 18.85 0.00 32.41 5.34
6019 8051 5.177696 GTCAAGAATCTTAGACTTTGCACGT 59.822 40.000 14.12 0.00 0.00 4.49
6020 8052 5.177511 TCAAGAATCTTAGACTTTGCACGTG 59.822 40.000 12.28 12.28 0.00 4.49
6022 8054 4.926238 AGAATCTTAGACTTTGCACGTGAG 59.074 41.667 22.23 10.69 0.00 3.51
6023 8055 4.521130 ATCTTAGACTTTGCACGTGAGA 57.479 40.909 22.23 10.05 0.00 3.27
6024 8056 3.902150 TCTTAGACTTTGCACGTGAGAG 58.098 45.455 22.23 15.06 0.00 3.20
6025 8057 3.568430 TCTTAGACTTTGCACGTGAGAGA 59.432 43.478 22.23 3.89 0.00 3.10
6026 8058 4.218635 TCTTAGACTTTGCACGTGAGAGAT 59.781 41.667 22.23 9.65 0.00 2.75
6032 8067 0.176449 TGCACGTGAGAGATGATGGG 59.824 55.000 22.23 0.00 0.00 4.00
6067 8102 2.259618 GTCGTCATAGTTGCGTCACAT 58.740 47.619 0.00 0.00 0.00 3.21
6068 8103 2.279136 GTCGTCATAGTTGCGTCACATC 59.721 50.000 0.00 0.00 0.00 3.06
6069 8104 2.163613 TCGTCATAGTTGCGTCACATCT 59.836 45.455 0.00 0.00 32.94 2.90
6086 8125 9.355215 CGTCACATCTAGTAACAAAAGTTAGAT 57.645 33.333 0.00 0.00 32.75 1.98
6237 8277 8.375506 AGAACTTAAACAAGTGATCCACTATCA 58.624 33.333 0.00 0.00 44.62 2.15
6266 8306 4.319901 GCACACTATTTTTAAAGAACGCGG 59.680 41.667 12.47 0.00 0.00 6.46
6278 8318 3.896648 AGAACGCGGCATATAATTTGG 57.103 42.857 12.47 0.00 0.00 3.28
6290 8331 6.494835 GGCATATAATTTGGACTCCCTTGAAT 59.505 38.462 0.00 0.00 0.00 2.57
6296 8337 9.768215 ATAATTTGGACTCCCTTGAATTAAGAA 57.232 29.630 0.00 0.00 38.76 2.52
6298 8339 5.843019 TGGACTCCCTTGAATTAAGAACT 57.157 39.130 0.00 0.00 38.76 3.01
6299 8340 6.945636 TGGACTCCCTTGAATTAAGAACTA 57.054 37.500 0.00 0.00 38.76 2.24
6300 8341 6.708285 TGGACTCCCTTGAATTAAGAACTAC 58.292 40.000 0.00 0.00 38.76 2.73
6301 8342 5.811100 GGACTCCCTTGAATTAAGAACTACG 59.189 44.000 0.00 0.00 38.76 3.51
6302 8343 6.350780 GGACTCCCTTGAATTAAGAACTACGA 60.351 42.308 0.00 0.00 38.76 3.43
6303 8344 6.396450 ACTCCCTTGAATTAAGAACTACGAC 58.604 40.000 0.00 0.00 38.76 4.34
6323 8364 4.868171 CGACAAGAATTATGAAACGGAGGA 59.132 41.667 0.00 0.00 0.00 3.71
6337 8378 7.561251 TGAAACGGAGGAAGTATCATGAATTA 58.439 34.615 0.00 0.00 0.00 1.40
6406 8449 3.957497 ACCAACTGCATCTAAAACCAACA 59.043 39.130 0.00 0.00 0.00 3.33
6409 8452 5.240623 CCAACTGCATCTAAAACCAACACTA 59.759 40.000 0.00 0.00 0.00 2.74
6429 8472 8.232913 ACACTAGTTTTGCTTCCAGATTTAAA 57.767 30.769 0.00 0.00 0.00 1.52
6432 8475 8.860088 ACTAGTTTTGCTTCCAGATTTAAACAT 58.140 29.630 0.00 0.00 0.00 2.71
6433 8476 9.346725 CTAGTTTTGCTTCCAGATTTAAACATC 57.653 33.333 0.00 0.00 0.00 3.06
6434 8477 7.725251 AGTTTTGCTTCCAGATTTAAACATCA 58.275 30.769 0.00 0.00 0.00 3.07
6435 8478 8.203485 AGTTTTGCTTCCAGATTTAAACATCAA 58.797 29.630 0.00 0.00 0.00 2.57
6436 8479 8.825745 GTTTTGCTTCCAGATTTAAACATCAAA 58.174 29.630 0.00 0.00 0.00 2.69
6437 8480 8.954950 TTTGCTTCCAGATTTAAACATCAAAA 57.045 26.923 0.00 0.00 0.00 2.44
6438 8481 8.954950 TTGCTTCCAGATTTAAACATCAAAAA 57.045 26.923 0.00 0.00 0.00 1.94
6439 8482 9.558396 TTGCTTCCAGATTTAAACATCAAAAAT 57.442 25.926 0.00 0.00 0.00 1.82
6440 8483 8.991026 TGCTTCCAGATTTAAACATCAAAAATG 58.009 29.630 0.00 0.00 0.00 2.32
6441 8484 7.959109 GCTTCCAGATTTAAACATCAAAAATGC 59.041 33.333 0.00 0.00 0.00 3.56
6442 8485 9.211485 CTTCCAGATTTAAACATCAAAAATGCT 57.789 29.630 0.00 0.00 0.00 3.79
6451 8494 6.509317 AACATCAAAAATGCTAAACACACG 57.491 33.333 0.00 0.00 0.00 4.49
6452 8495 4.981674 ACATCAAAAATGCTAAACACACGG 59.018 37.500 0.00 0.00 0.00 4.94
6453 8496 3.971150 TCAAAAATGCTAAACACACGGG 58.029 40.909 0.00 0.00 0.00 5.28
6454 8497 3.056304 CAAAAATGCTAAACACACGGGG 58.944 45.455 0.00 0.00 0.00 5.73
6455 8498 0.601057 AAATGCTAAACACACGGGGC 59.399 50.000 0.00 0.00 0.00 5.80
6456 8499 0.251165 AATGCTAAACACACGGGGCT 60.251 50.000 0.00 0.00 0.00 5.19
6457 8500 0.960364 ATGCTAAACACACGGGGCTG 60.960 55.000 0.00 0.00 0.00 4.85
6458 8501 1.599797 GCTAAACACACGGGGCTGT 60.600 57.895 0.00 0.00 0.00 4.40
6459 8502 1.170290 GCTAAACACACGGGGCTGTT 61.170 55.000 0.00 0.00 31.76 3.16
6460 8503 1.878948 GCTAAACACACGGGGCTGTTA 60.879 52.381 0.00 0.00 30.26 2.41
6461 8504 1.802365 CTAAACACACGGGGCTGTTAC 59.198 52.381 0.00 0.00 30.26 2.50
6462 8505 1.161563 AAACACACGGGGCTGTTACG 61.162 55.000 0.00 0.00 30.26 3.18
6463 8506 2.740826 CACACGGGGCTGTTACGG 60.741 66.667 0.00 0.00 0.00 4.02
6464 8507 4.011517 ACACGGGGCTGTTACGGG 62.012 66.667 0.00 0.00 37.00 5.28
6465 8508 4.770874 CACGGGGCTGTTACGGGG 62.771 72.222 0.00 0.00 0.00 5.73
6467 8510 4.024545 CGGGGCTGTTACGGGGTT 62.025 66.667 0.00 0.00 0.00 4.11
6468 8511 2.437449 GGGGCTGTTACGGGGTTT 59.563 61.111 0.00 0.00 0.00 3.27
6469 8512 1.228644 GGGGCTGTTACGGGGTTTT 60.229 57.895 0.00 0.00 0.00 2.43
6470 8513 1.246056 GGGGCTGTTACGGGGTTTTC 61.246 60.000 0.00 0.00 0.00 2.29
6471 8514 1.246056 GGGCTGTTACGGGGTTTTCC 61.246 60.000 0.00 0.00 39.75 3.13
6486 8529 5.648330 GGTTTTCCCCTAATACTCTCCAT 57.352 43.478 0.00 0.00 0.00 3.41
6487 8530 5.622180 GGTTTTCCCCTAATACTCTCCATC 58.378 45.833 0.00 0.00 0.00 3.51
6488 8531 5.298347 GTTTTCCCCTAATACTCTCCATCG 58.702 45.833 0.00 0.00 0.00 3.84
6489 8532 2.526432 TCCCCTAATACTCTCCATCGC 58.474 52.381 0.00 0.00 0.00 4.58
6490 8533 1.550976 CCCCTAATACTCTCCATCGCC 59.449 57.143 0.00 0.00 0.00 5.54
6491 8534 1.550976 CCCTAATACTCTCCATCGCCC 59.449 57.143 0.00 0.00 0.00 6.13
6492 8535 1.550976 CCTAATACTCTCCATCGCCCC 59.449 57.143 0.00 0.00 0.00 5.80
6493 8536 1.550976 CTAATACTCTCCATCGCCCCC 59.449 57.143 0.00 0.00 0.00 5.40
6494 8537 0.104934 AATACTCTCCATCGCCCCCT 60.105 55.000 0.00 0.00 0.00 4.79
6495 8538 0.104934 ATACTCTCCATCGCCCCCTT 60.105 55.000 0.00 0.00 0.00 3.95
6496 8539 1.048724 TACTCTCCATCGCCCCCTTG 61.049 60.000 0.00 0.00 0.00 3.61
6497 8540 2.040442 TCTCCATCGCCCCCTTGA 59.960 61.111 0.00 0.00 0.00 3.02
6498 8541 1.384502 TCTCCATCGCCCCCTTGAT 60.385 57.895 0.00 0.00 0.00 2.57
6499 8542 0.988145 TCTCCATCGCCCCCTTGATT 60.988 55.000 0.00 0.00 0.00 2.57
6500 8543 0.106519 CTCCATCGCCCCCTTGATTT 60.107 55.000 0.00 0.00 0.00 2.17
6501 8544 0.334676 TCCATCGCCCCCTTGATTTT 59.665 50.000 0.00 0.00 0.00 1.82
6502 8545 0.746659 CCATCGCCCCCTTGATTTTC 59.253 55.000 0.00 0.00 0.00 2.29
6503 8546 1.473258 CATCGCCCCCTTGATTTTCA 58.527 50.000 0.00 0.00 0.00 2.69
6504 8547 1.406539 CATCGCCCCCTTGATTTTCAG 59.593 52.381 0.00 0.00 0.00 3.02
6505 8548 0.965363 TCGCCCCCTTGATTTTCAGC 60.965 55.000 0.00 0.00 0.00 4.26
6506 8549 1.512694 GCCCCCTTGATTTTCAGCG 59.487 57.895 0.00 0.00 0.00 5.18
6507 8550 1.948721 GCCCCCTTGATTTTCAGCGG 61.949 60.000 0.00 0.00 0.00 5.52
6508 8551 1.322538 CCCCCTTGATTTTCAGCGGG 61.323 60.000 6.87 6.87 38.15 6.13
6509 8552 1.322538 CCCCTTGATTTTCAGCGGGG 61.323 60.000 14.74 14.74 45.99 5.73
6510 8553 0.611896 CCCTTGATTTTCAGCGGGGT 60.612 55.000 6.21 0.00 36.12 4.95
6511 8554 0.527565 CCTTGATTTTCAGCGGGGTG 59.472 55.000 0.00 0.00 0.00 4.61
6512 8555 0.527565 CTTGATTTTCAGCGGGGTGG 59.472 55.000 0.00 0.00 0.00 4.61
6513 8556 0.897863 TTGATTTTCAGCGGGGTGGG 60.898 55.000 0.00 0.00 0.00 4.61
6514 8557 2.037208 ATTTTCAGCGGGGTGGGG 59.963 61.111 0.00 0.00 0.00 4.96
6515 8558 4.986708 TTTTCAGCGGGGTGGGGC 62.987 66.667 0.00 0.00 0.00 5.80
6530 8573 2.941583 GGCCCCAACCTCCCTCTT 60.942 66.667 0.00 0.00 0.00 2.85
6531 8574 1.618447 GGCCCCAACCTCCCTCTTA 60.618 63.158 0.00 0.00 0.00 2.10
6532 8575 1.212250 GGCCCCAACCTCCCTCTTAA 61.212 60.000 0.00 0.00 0.00 1.85
6533 8576 0.927029 GCCCCAACCTCCCTCTTAAT 59.073 55.000 0.00 0.00 0.00 1.40
6534 8577 1.133761 GCCCCAACCTCCCTCTTAATC 60.134 57.143 0.00 0.00 0.00 1.75
6535 8578 1.495148 CCCCAACCTCCCTCTTAATCC 59.505 57.143 0.00 0.00 0.00 3.01
6536 8579 2.205342 CCCAACCTCCCTCTTAATCCA 58.795 52.381 0.00 0.00 0.00 3.41
6537 8580 2.580783 CCCAACCTCCCTCTTAATCCAA 59.419 50.000 0.00 0.00 0.00 3.53
6538 8581 3.205282 CCCAACCTCCCTCTTAATCCAAT 59.795 47.826 0.00 0.00 0.00 3.16
6539 8582 4.464947 CCAACCTCCCTCTTAATCCAATC 58.535 47.826 0.00 0.00 0.00 2.67
6540 8583 4.079787 CCAACCTCCCTCTTAATCCAATCA 60.080 45.833 0.00 0.00 0.00 2.57
6541 8584 5.509498 CAACCTCCCTCTTAATCCAATCAA 58.491 41.667 0.00 0.00 0.00 2.57
6542 8585 5.796502 ACCTCCCTCTTAATCCAATCAAA 57.203 39.130 0.00 0.00 0.00 2.69
6543 8586 5.760131 ACCTCCCTCTTAATCCAATCAAAG 58.240 41.667 0.00 0.00 0.00 2.77
6544 8587 5.492524 ACCTCCCTCTTAATCCAATCAAAGA 59.507 40.000 0.00 0.00 0.00 2.52
6545 8588 6.161170 ACCTCCCTCTTAATCCAATCAAAGAT 59.839 38.462 0.00 0.00 0.00 2.40
6546 8589 7.065504 CCTCCCTCTTAATCCAATCAAAGATT 58.934 38.462 0.00 0.00 36.67 2.40
6547 8590 7.014038 CCTCCCTCTTAATCCAATCAAAGATTG 59.986 40.741 11.73 11.73 34.60 2.67
6548 8591 6.322201 TCCCTCTTAATCCAATCAAAGATTGC 59.678 38.462 12.93 0.00 34.60 3.56
6549 8592 6.462067 CCCTCTTAATCCAATCAAAGATTGCC 60.462 42.308 12.93 0.00 34.60 4.52
6550 8593 6.097270 CCTCTTAATCCAATCAAAGATTGCCA 59.903 38.462 12.93 3.84 34.60 4.92
6551 8594 7.104043 TCTTAATCCAATCAAAGATTGCCAG 57.896 36.000 12.93 2.23 34.60 4.85
6552 8595 4.748277 AATCCAATCAAAGATTGCCAGG 57.252 40.909 12.93 1.82 31.56 4.45
6553 8596 3.173953 TCCAATCAAAGATTGCCAGGT 57.826 42.857 12.93 0.00 0.00 4.00
6554 8597 3.091545 TCCAATCAAAGATTGCCAGGTC 58.908 45.455 12.93 0.00 0.00 3.85
6555 8598 2.827322 CCAATCAAAGATTGCCAGGTCA 59.173 45.455 12.93 0.00 0.00 4.02
6556 8599 3.258872 CCAATCAAAGATTGCCAGGTCAA 59.741 43.478 12.93 0.00 0.00 3.18
6557 8600 4.081309 CCAATCAAAGATTGCCAGGTCAAT 60.081 41.667 12.93 8.39 39.20 2.57
6558 8601 5.127519 CCAATCAAAGATTGCCAGGTCAATA 59.872 40.000 12.93 0.00 36.85 1.90
6559 8602 6.183360 CCAATCAAAGATTGCCAGGTCAATAT 60.183 38.462 12.93 4.13 36.85 1.28
6560 8603 6.645790 ATCAAAGATTGCCAGGTCAATATC 57.354 37.500 8.57 0.86 36.85 1.63
6561 8604 5.759059 TCAAAGATTGCCAGGTCAATATCT 58.241 37.500 8.57 2.76 36.85 1.98
6562 8605 6.189859 TCAAAGATTGCCAGGTCAATATCTT 58.810 36.000 8.57 7.50 36.85 2.40
6563 8606 6.664816 TCAAAGATTGCCAGGTCAATATCTTT 59.335 34.615 13.80 13.80 36.50 2.52
6564 8607 6.705863 AAGATTGCCAGGTCAATATCTTTC 57.294 37.500 8.57 0.00 36.85 2.62
6565 8608 5.136105 AGATTGCCAGGTCAATATCTTTCC 58.864 41.667 8.57 0.00 36.85 3.13
6566 8609 2.917933 TGCCAGGTCAATATCTTTCCG 58.082 47.619 0.00 0.00 0.00 4.30
6567 8610 2.238646 TGCCAGGTCAATATCTTTCCGT 59.761 45.455 0.00 0.00 0.00 4.69
6568 8611 3.452990 TGCCAGGTCAATATCTTTCCGTA 59.547 43.478 0.00 0.00 0.00 4.02
6569 8612 4.080807 TGCCAGGTCAATATCTTTCCGTAA 60.081 41.667 0.00 0.00 0.00 3.18
6570 8613 4.879545 GCCAGGTCAATATCTTTCCGTAAA 59.120 41.667 0.00 0.00 0.00 2.01
6571 8614 5.007724 GCCAGGTCAATATCTTTCCGTAAAG 59.992 44.000 0.00 0.00 42.99 1.85
6572 8615 5.007724 CCAGGTCAATATCTTTCCGTAAAGC 59.992 44.000 0.00 0.00 41.64 3.51
6573 8616 5.817816 CAGGTCAATATCTTTCCGTAAAGCT 59.182 40.000 0.00 0.00 41.64 3.74
6574 8617 6.316390 CAGGTCAATATCTTTCCGTAAAGCTT 59.684 38.462 0.00 0.00 41.64 3.74
6575 8618 7.494625 CAGGTCAATATCTTTCCGTAAAGCTTA 59.505 37.037 0.00 0.00 41.64 3.09
6576 8619 8.044908 AGGTCAATATCTTTCCGTAAAGCTTAA 58.955 33.333 0.00 0.00 41.64 1.85
6577 8620 8.336080 GGTCAATATCTTTCCGTAAAGCTTAAG 58.664 37.037 0.00 0.00 41.64 1.85
6578 8621 8.880750 GTCAATATCTTTCCGTAAAGCTTAAGT 58.119 33.333 0.00 0.00 41.64 2.24
6585 8628 9.498176 TCTTTCCGTAAAGCTTAAGTAAAATCT 57.502 29.630 0.00 0.00 41.64 2.40
6586 8629 9.756461 CTTTCCGTAAAGCTTAAGTAAAATCTC 57.244 33.333 0.00 0.00 35.98 2.75
6587 8630 7.515957 TCCGTAAAGCTTAAGTAAAATCTCG 57.484 36.000 0.00 0.48 0.00 4.04
6588 8631 7.092716 TCCGTAAAGCTTAAGTAAAATCTCGT 58.907 34.615 0.00 0.00 0.00 4.18
6589 8632 7.599998 TCCGTAAAGCTTAAGTAAAATCTCGTT 59.400 33.333 0.00 0.00 0.00 3.85
6590 8633 7.686938 CCGTAAAGCTTAAGTAAAATCTCGTTG 59.313 37.037 0.00 0.00 0.00 4.10
6591 8634 8.430063 CGTAAAGCTTAAGTAAAATCTCGTTGA 58.570 33.333 0.00 0.00 0.00 3.18
6594 8637 7.907214 AGCTTAAGTAAAATCTCGTTGATGT 57.093 32.000 4.02 0.00 35.21 3.06
6595 8638 8.997621 AGCTTAAGTAAAATCTCGTTGATGTA 57.002 30.769 4.02 0.00 35.21 2.29
6596 8639 9.088512 AGCTTAAGTAAAATCTCGTTGATGTAG 57.911 33.333 4.02 0.00 35.21 2.74
6597 8640 7.846592 GCTTAAGTAAAATCTCGTTGATGTAGC 59.153 37.037 4.02 0.00 35.21 3.58
6598 8641 8.766000 TTAAGTAAAATCTCGTTGATGTAGCA 57.234 30.769 0.00 0.00 35.21 3.49
6599 8642 7.849804 AAGTAAAATCTCGTTGATGTAGCAT 57.150 32.000 0.00 0.00 35.21 3.79
6600 8643 7.849804 AGTAAAATCTCGTTGATGTAGCATT 57.150 32.000 0.00 0.00 35.21 3.56
6601 8644 7.688372 AGTAAAATCTCGTTGATGTAGCATTG 58.312 34.615 0.00 0.00 35.21 2.82
6602 8645 4.542662 AATCTCGTTGATGTAGCATTGC 57.457 40.909 0.00 0.00 35.21 3.56
6603 8646 3.251479 TCTCGTTGATGTAGCATTGCT 57.749 42.857 16.63 16.63 43.41 3.91
6604 8647 3.190079 TCTCGTTGATGTAGCATTGCTC 58.810 45.455 15.81 7.72 40.44 4.26
6605 8648 3.118992 TCTCGTTGATGTAGCATTGCTCT 60.119 43.478 15.81 0.93 40.44 4.09
6606 8649 3.599343 TCGTTGATGTAGCATTGCTCTT 58.401 40.909 15.81 5.44 40.44 2.85
6607 8650 4.002982 TCGTTGATGTAGCATTGCTCTTT 58.997 39.130 15.81 0.34 40.44 2.52
6608 8651 5.175127 TCGTTGATGTAGCATTGCTCTTTA 58.825 37.500 15.81 0.50 40.44 1.85
6609 8652 5.641636 TCGTTGATGTAGCATTGCTCTTTAA 59.358 36.000 15.81 5.92 40.44 1.52
6610 8653 5.961843 CGTTGATGTAGCATTGCTCTTTAAG 59.038 40.000 15.81 0.00 40.44 1.85
6675 8888 7.709182 TGTCAATACAGTACGGATTAAGAATGG 59.291 37.037 0.00 0.00 0.00 3.16
6685 8898 4.499696 CGGATTAAGAATGGCATTGTTCCC 60.500 45.833 23.84 20.34 0.00 3.97
6736 8950 3.164268 CACATGATTCCCCTTTTCCACA 58.836 45.455 0.00 0.00 0.00 4.17
6757 8971 8.465999 TCCACATTACATGTTCCAACAAATATC 58.534 33.333 2.30 0.00 42.70 1.63
6831 9048 4.103311 GGTATCTCCTCCCTAGCATTTTGT 59.897 45.833 0.00 0.00 0.00 2.83
6834 9051 3.587061 TCTCCTCCCTAGCATTTTGTTGA 59.413 43.478 0.00 0.00 0.00 3.18
6842 9059 6.775629 TCCCTAGCATTTTGTTGAGTAAACTT 59.224 34.615 0.00 0.00 39.70 2.66
6843 9060 7.286775 TCCCTAGCATTTTGTTGAGTAAACTTT 59.713 33.333 0.00 0.00 39.70 2.66
6844 9061 7.926018 CCCTAGCATTTTGTTGAGTAAACTTTT 59.074 33.333 0.00 0.00 39.70 2.27
6845 9062 9.313118 CCTAGCATTTTGTTGAGTAAACTTTTT 57.687 29.630 0.00 0.00 39.70 1.94
6867 9084 3.545366 TTTGGGTAAGTTTTGTTGGGC 57.455 42.857 0.00 0.00 0.00 5.36
6868 9085 2.160721 TGGGTAAGTTTTGTTGGGCA 57.839 45.000 0.00 0.00 0.00 5.36
6869 9086 2.467880 TGGGTAAGTTTTGTTGGGCAA 58.532 42.857 0.00 0.00 34.87 4.52
6870 9087 2.838202 TGGGTAAGTTTTGTTGGGCAAA 59.162 40.909 0.00 0.00 44.52 3.68
6871 9088 3.199677 GGGTAAGTTTTGTTGGGCAAAC 58.800 45.455 0.00 0.00 45.70 2.93
6872 9089 3.118555 GGGTAAGTTTTGTTGGGCAAACT 60.119 43.478 6.28 0.09 45.70 2.66
6873 9090 4.509616 GGTAAGTTTTGTTGGGCAAACTT 58.490 39.130 14.52 14.52 45.70 2.66
6874 9091 4.938832 GGTAAGTTTTGTTGGGCAAACTTT 59.061 37.500 15.11 3.81 45.70 2.66
6875 9092 5.163804 GGTAAGTTTTGTTGGGCAAACTTTG 60.164 40.000 15.11 0.00 45.70 2.77
6876 9093 4.014569 AGTTTTGTTGGGCAAACTTTGT 57.985 36.364 6.28 0.00 45.70 2.83
6877 9094 5.153950 AGTTTTGTTGGGCAAACTTTGTA 57.846 34.783 6.28 0.00 45.70 2.41
6878 9095 5.739959 AGTTTTGTTGGGCAAACTTTGTAT 58.260 33.333 6.28 0.00 45.70 2.29
6879 9096 5.584251 AGTTTTGTTGGGCAAACTTTGTATG 59.416 36.000 6.28 0.00 45.70 2.39
6880 9097 4.744795 TTGTTGGGCAAACTTTGTATGT 57.255 36.364 6.28 0.00 39.70 2.29
6881 9098 4.314740 TGTTGGGCAAACTTTGTATGTC 57.685 40.909 6.28 0.00 39.70 3.06
6882 9099 3.957497 TGTTGGGCAAACTTTGTATGTCT 59.043 39.130 6.28 0.00 39.70 3.41
6883 9100 4.037446 TGTTGGGCAAACTTTGTATGTCTC 59.963 41.667 6.28 0.00 39.70 3.36
6884 9101 3.826524 TGGGCAAACTTTGTATGTCTCA 58.173 40.909 3.48 0.00 0.00 3.27
6885 9102 3.820467 TGGGCAAACTTTGTATGTCTCAG 59.180 43.478 3.48 0.00 0.00 3.35
6886 9103 3.366374 GGGCAAACTTTGTATGTCTCAGC 60.366 47.826 3.48 0.00 0.00 4.26
6887 9104 3.503748 GGCAAACTTTGTATGTCTCAGCT 59.496 43.478 3.48 0.00 0.00 4.24
6888 9105 4.695455 GGCAAACTTTGTATGTCTCAGCTA 59.305 41.667 3.48 0.00 0.00 3.32
6889 9106 5.181245 GGCAAACTTTGTATGTCTCAGCTAA 59.819 40.000 3.48 0.00 0.00 3.09
6890 9107 6.293955 GGCAAACTTTGTATGTCTCAGCTAAA 60.294 38.462 3.48 0.00 0.00 1.85
6891 9108 7.138736 GCAAACTTTGTATGTCTCAGCTAAAA 58.861 34.615 3.48 0.00 0.00 1.52
6892 9109 7.113544 GCAAACTTTGTATGTCTCAGCTAAAAC 59.886 37.037 3.48 0.00 0.00 2.43
6893 9110 6.803154 ACTTTGTATGTCTCAGCTAAAACC 57.197 37.500 0.00 0.00 0.00 3.27
6894 9111 6.534634 ACTTTGTATGTCTCAGCTAAAACCT 58.465 36.000 0.00 0.00 0.00 3.50
6895 9112 6.651225 ACTTTGTATGTCTCAGCTAAAACCTC 59.349 38.462 0.00 0.00 0.00 3.85
6896 9113 6.360370 TTGTATGTCTCAGCTAAAACCTCT 57.640 37.500 0.00 0.00 0.00 3.69
6897 9114 5.967088 TGTATGTCTCAGCTAAAACCTCTC 58.033 41.667 0.00 0.00 0.00 3.20
6898 9115 3.963428 TGTCTCAGCTAAAACCTCTCC 57.037 47.619 0.00 0.00 0.00 3.71
6899 9116 3.511477 TGTCTCAGCTAAAACCTCTCCT 58.489 45.455 0.00 0.00 0.00 3.69
6900 9117 3.904339 TGTCTCAGCTAAAACCTCTCCTT 59.096 43.478 0.00 0.00 0.00 3.36
6901 9118 4.249661 GTCTCAGCTAAAACCTCTCCTTG 58.750 47.826 0.00 0.00 0.00 3.61
6902 9119 3.261897 TCTCAGCTAAAACCTCTCCTTGG 59.738 47.826 0.00 0.00 0.00 3.61
6903 9120 3.248024 TCAGCTAAAACCTCTCCTTGGA 58.752 45.455 0.00 0.00 0.00 3.53
6904 9121 3.008049 TCAGCTAAAACCTCTCCTTGGAC 59.992 47.826 0.00 0.00 0.00 4.02
6905 9122 2.979678 AGCTAAAACCTCTCCTTGGACA 59.020 45.455 0.00 0.00 0.00 4.02
6906 9123 3.008485 AGCTAAAACCTCTCCTTGGACAG 59.992 47.826 0.00 0.00 0.00 3.51
6907 9124 3.244596 GCTAAAACCTCTCCTTGGACAGT 60.245 47.826 0.00 0.00 0.00 3.55
6908 9125 3.953542 AAAACCTCTCCTTGGACAGTT 57.046 42.857 0.00 0.00 0.00 3.16
6909 9126 2.938956 AACCTCTCCTTGGACAGTTG 57.061 50.000 0.00 0.00 0.00 3.16
6910 9127 1.059913 ACCTCTCCTTGGACAGTTGG 58.940 55.000 0.00 0.00 0.00 3.77
6911 9128 0.322008 CCTCTCCTTGGACAGTTGGC 60.322 60.000 0.00 0.00 0.00 4.52
6912 9129 0.322008 CTCTCCTTGGACAGTTGGCC 60.322 60.000 0.00 0.00 45.93 5.36
6913 9130 1.303643 CTCCTTGGACAGTTGGCCC 60.304 63.158 0.00 0.00 44.80 5.80
6914 9131 1.774217 TCCTTGGACAGTTGGCCCT 60.774 57.895 0.00 0.00 44.80 5.19
6915 9132 1.153756 CCTTGGACAGTTGGCCCTT 59.846 57.895 0.00 0.00 44.80 3.95
6916 9133 1.181098 CCTTGGACAGTTGGCCCTTG 61.181 60.000 0.00 0.00 44.80 3.61
6917 9134 0.178992 CTTGGACAGTTGGCCCTTGA 60.179 55.000 0.00 0.00 44.80 3.02
6918 9135 0.482446 TTGGACAGTTGGCCCTTGAT 59.518 50.000 0.00 0.00 44.80 2.57
6919 9136 1.367346 TGGACAGTTGGCCCTTGATA 58.633 50.000 0.00 0.00 44.80 2.15
6920 9137 1.004277 TGGACAGTTGGCCCTTGATAC 59.996 52.381 0.00 0.00 44.80 2.24
6921 9138 1.282157 GGACAGTTGGCCCTTGATACT 59.718 52.381 0.00 0.00 37.19 2.12
6922 9139 2.290960 GGACAGTTGGCCCTTGATACTT 60.291 50.000 0.00 0.00 37.19 2.24
6923 9140 3.421844 GACAGTTGGCCCTTGATACTTT 58.578 45.455 0.00 0.00 0.00 2.66
6924 9141 3.826729 GACAGTTGGCCCTTGATACTTTT 59.173 43.478 0.00 0.00 0.00 2.27
6925 9142 3.573967 ACAGTTGGCCCTTGATACTTTTG 59.426 43.478 0.00 0.00 0.00 2.44
6926 9143 3.573967 CAGTTGGCCCTTGATACTTTTGT 59.426 43.478 0.00 0.00 0.00 2.83
6927 9144 4.039124 CAGTTGGCCCTTGATACTTTTGTT 59.961 41.667 0.00 0.00 0.00 2.83
6928 9145 4.280929 AGTTGGCCCTTGATACTTTTGTTC 59.719 41.667 0.00 0.00 0.00 3.18
6929 9146 3.161866 TGGCCCTTGATACTTTTGTTCC 58.838 45.455 0.00 0.00 0.00 3.62
6930 9147 3.161866 GGCCCTTGATACTTTTGTTCCA 58.838 45.455 0.00 0.00 0.00 3.53
6931 9148 3.769300 GGCCCTTGATACTTTTGTTCCAT 59.231 43.478 0.00 0.00 0.00 3.41
6932 9149 4.142160 GGCCCTTGATACTTTTGTTCCATC 60.142 45.833 0.00 0.00 0.00 3.51
6933 9150 4.438744 GCCCTTGATACTTTTGTTCCATCG 60.439 45.833 0.00 0.00 0.00 3.84
6934 9151 4.438744 CCCTTGATACTTTTGTTCCATCGC 60.439 45.833 0.00 0.00 0.00 4.58
6935 9152 4.155826 CCTTGATACTTTTGTTCCATCGCA 59.844 41.667 0.00 0.00 0.00 5.10
6936 9153 5.335583 CCTTGATACTTTTGTTCCATCGCAA 60.336 40.000 0.00 0.00 0.00 4.85
6937 9154 5.041951 TGATACTTTTGTTCCATCGCAAC 57.958 39.130 0.00 0.00 0.00 4.17
6938 9155 4.517075 TGATACTTTTGTTCCATCGCAACA 59.483 37.500 0.00 0.00 31.76 3.33
6939 9156 5.182950 TGATACTTTTGTTCCATCGCAACAT 59.817 36.000 0.00 0.00 33.76 2.71
6940 9157 3.641648 ACTTTTGTTCCATCGCAACATG 58.358 40.909 0.00 0.00 33.76 3.21
6941 9158 2.721274 TTTGTTCCATCGCAACATGG 57.279 45.000 0.00 0.63 44.45 3.66
6942 9159 0.243365 TTGTTCCATCGCAACATGGC 59.757 50.000 0.00 0.00 42.97 4.40
6950 9167 2.676471 GCAACATGGCGGGGAAGT 60.676 61.111 0.00 0.00 0.00 3.01
6951 9168 2.700773 GCAACATGGCGGGGAAGTC 61.701 63.158 0.00 0.00 0.00 3.01
6952 9169 1.002134 CAACATGGCGGGGAAGTCT 60.002 57.895 0.00 0.00 0.00 3.24
6953 9170 1.002134 AACATGGCGGGGAAGTCTG 60.002 57.895 0.00 0.00 0.00 3.51
6954 9171 2.124570 CATGGCGGGGAAGTCTGG 60.125 66.667 0.00 0.00 0.00 3.86
6955 9172 4.115199 ATGGCGGGGAAGTCTGGC 62.115 66.667 0.00 0.00 38.84 4.85
6958 9175 4.115199 GCGGGGAAGTCTGGCCAT 62.115 66.667 5.51 0.00 0.00 4.40
6959 9176 2.677228 CGGGGAAGTCTGGCCATT 59.323 61.111 5.51 0.00 0.00 3.16
6960 9177 1.000896 CGGGGAAGTCTGGCCATTT 60.001 57.895 5.51 0.54 0.00 2.32
6961 9178 1.032114 CGGGGAAGTCTGGCCATTTC 61.032 60.000 5.51 10.99 0.00 2.17
6962 9179 1.032114 GGGGAAGTCTGGCCATTTCG 61.032 60.000 5.51 0.00 0.00 3.46
6963 9180 1.032114 GGGAAGTCTGGCCATTTCGG 61.032 60.000 5.51 0.00 38.11 4.30
6964 9181 1.032114 GGAAGTCTGGCCATTTCGGG 61.032 60.000 5.51 0.00 34.06 5.14
6965 9182 0.322546 GAAGTCTGGCCATTTCGGGT 60.323 55.000 5.51 0.00 34.06 5.28
6966 9183 0.322546 AAGTCTGGCCATTTCGGGTC 60.323 55.000 5.51 0.00 34.06 4.46
6967 9184 1.002624 GTCTGGCCATTTCGGGTCA 60.003 57.895 5.51 0.00 41.07 4.02
6968 9185 0.394352 GTCTGGCCATTTCGGGTCAT 60.394 55.000 5.51 0.00 42.70 3.06
6969 9186 1.134220 GTCTGGCCATTTCGGGTCATA 60.134 52.381 5.51 0.00 42.70 2.15
6970 9187 1.774254 TCTGGCCATTTCGGGTCATAT 59.226 47.619 5.51 0.00 42.70 1.78
6971 9188 1.881973 CTGGCCATTTCGGGTCATATG 59.118 52.381 5.51 0.00 42.70 1.78
6972 9189 1.492599 TGGCCATTTCGGGTCATATGA 59.507 47.619 0.00 0.00 37.70 2.15
6973 9190 2.092158 TGGCCATTTCGGGTCATATGAA 60.092 45.455 7.07 0.00 37.70 2.57
6974 9191 2.554032 GGCCATTTCGGGTCATATGAAG 59.446 50.000 7.07 2.46 34.06 3.02
6975 9192 3.476552 GCCATTTCGGGTCATATGAAGA 58.523 45.455 7.07 4.91 34.06 2.87
6976 9193 4.074970 GCCATTTCGGGTCATATGAAGAT 58.925 43.478 7.07 0.00 34.06 2.40
6977 9194 5.245531 GCCATTTCGGGTCATATGAAGATA 58.754 41.667 7.07 3.72 34.06 1.98
6978 9195 5.882557 GCCATTTCGGGTCATATGAAGATAT 59.117 40.000 7.07 5.76 34.06 1.63
6979 9196 7.047891 GCCATTTCGGGTCATATGAAGATATA 58.952 38.462 7.07 0.00 34.06 0.86
6980 9197 7.225538 GCCATTTCGGGTCATATGAAGATATAG 59.774 40.741 7.07 3.55 34.06 1.31
6981 9198 8.478066 CCATTTCGGGTCATATGAAGATATAGA 58.522 37.037 7.07 0.00 0.00 1.98
6982 9199 9.875691 CATTTCGGGTCATATGAAGATATAGAA 57.124 33.333 7.07 4.33 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 118 8.047310 GTCCTTTTGATCTTCCTGGTTTATCTA 58.953 37.037 0.00 0.00 0.00 1.98
230 231 2.163818 TTGTTCATCGACCACCAGTC 57.836 50.000 0.00 0.00 42.54 3.51
240 241 7.907045 CAGATATTCTTCAACCTTTGTTCATCG 59.093 37.037 0.00 0.00 30.42 3.84
270 295 3.244700 ACCATGCATCTTAGGGATAGCAC 60.245 47.826 6.99 0.00 39.39 4.40
271 296 2.981784 ACCATGCATCTTAGGGATAGCA 59.018 45.455 6.99 0.00 40.16 3.49
272 297 3.341823 CACCATGCATCTTAGGGATAGC 58.658 50.000 6.99 0.00 32.64 2.97
273 298 3.341823 GCACCATGCATCTTAGGGATAG 58.658 50.000 6.99 0.00 44.26 2.08
274 299 3.423539 GCACCATGCATCTTAGGGATA 57.576 47.619 6.99 0.00 44.26 2.59
275 300 2.283145 GCACCATGCATCTTAGGGAT 57.717 50.000 6.99 0.00 44.26 3.85
276 301 3.806941 GCACCATGCATCTTAGGGA 57.193 52.632 6.99 0.00 44.26 4.20
286 311 1.226686 CCGAGATAGCAGCACCATGC 61.227 60.000 0.00 0.00 46.88 4.06
287 312 0.390492 TCCGAGATAGCAGCACCATG 59.610 55.000 0.00 0.00 0.00 3.66
288 313 1.001746 CATCCGAGATAGCAGCACCAT 59.998 52.381 0.00 0.00 0.00 3.55
289 314 0.390492 CATCCGAGATAGCAGCACCA 59.610 55.000 0.00 0.00 0.00 4.17
290 315 0.390860 ACATCCGAGATAGCAGCACC 59.609 55.000 0.00 0.00 0.00 5.01
291 316 1.339610 AGACATCCGAGATAGCAGCAC 59.660 52.381 0.00 0.00 0.00 4.40
292 317 1.339291 CAGACATCCGAGATAGCAGCA 59.661 52.381 0.00 0.00 0.00 4.41
293 318 1.339610 ACAGACATCCGAGATAGCAGC 59.660 52.381 0.00 0.00 0.00 5.25
649 695 4.889832 AGCATGCTAAAACTGCTCATAC 57.110 40.909 21.21 0.00 42.35 2.39
655 701 1.403323 GAGGGAGCATGCTAAAACTGC 59.597 52.381 22.74 5.92 36.15 4.40
656 702 2.996631 AGAGGGAGCATGCTAAAACTG 58.003 47.619 22.74 0.00 0.00 3.16
657 703 3.728385 AAGAGGGAGCATGCTAAAACT 57.272 42.857 22.74 15.86 0.00 2.66
658 704 3.628032 GGTAAGAGGGAGCATGCTAAAAC 59.372 47.826 22.74 12.78 0.00 2.43
659 705 3.371595 GGGTAAGAGGGAGCATGCTAAAA 60.372 47.826 22.74 0.00 0.00 1.52
660 706 2.172717 GGGTAAGAGGGAGCATGCTAAA 59.827 50.000 22.74 0.00 0.00 1.85
661 707 1.768870 GGGTAAGAGGGAGCATGCTAA 59.231 52.381 22.74 0.00 0.00 3.09
662 708 1.424638 GGGTAAGAGGGAGCATGCTA 58.575 55.000 22.74 0.00 0.00 3.49
663 709 1.348775 GGGGTAAGAGGGAGCATGCT 61.349 60.000 22.92 22.92 0.00 3.79
664 710 1.149401 GGGGTAAGAGGGAGCATGC 59.851 63.158 10.51 10.51 0.00 4.06
665 711 0.695803 AGGGGGTAAGAGGGAGCATG 60.696 60.000 0.00 0.00 0.00 4.06
666 712 0.046397 AAGGGGGTAAGAGGGAGCAT 59.954 55.000 0.00 0.00 0.00 3.79
667 713 0.178843 AAAGGGGGTAAGAGGGAGCA 60.179 55.000 0.00 0.00 0.00 4.26
668 714 1.000496 AAAAGGGGGTAAGAGGGAGC 59.000 55.000 0.00 0.00 0.00 4.70
763 809 9.681062 CCCTCTTTTTACATATGAGGTAAGAAA 57.319 33.333 10.38 0.45 41.83 2.52
796 842 3.582208 AGGCAAATTTTAACATGCTCCCA 59.418 39.130 0.00 0.00 38.79 4.37
834 880 4.934797 TCAAAGAAAGGACATCTCCCAT 57.065 40.909 0.00 0.00 37.25 4.00
836 882 7.967908 TCTATATCAAAGAAAGGACATCTCCC 58.032 38.462 0.00 0.00 37.25 4.30
995 1041 6.827251 TGTATCTGTAATGTCTCGACTAGGTT 59.173 38.462 0.00 0.00 0.00 3.50
1068 1116 0.031585 CGTCTCCTTGGTCACGTCAA 59.968 55.000 0.00 0.00 0.00 3.18
1320 1370 1.548719 CGGAACATACCCAGACTCACA 59.451 52.381 0.00 0.00 0.00 3.58
1535 1585 6.465894 GGTCATATGCCTAGACCTAAATTGGT 60.466 42.308 0.00 0.00 46.45 3.67
1572 1622 7.178274 TGGCACAAATATGGTAGAACAAGATTT 59.822 33.333 0.00 0.00 31.92 2.17
1601 1656 6.482973 ACATGAAAATTCCACCACAAATTGTC 59.517 34.615 0.00 0.00 32.16 3.18
1679 1734 0.109342 CCATCAAATCCCCGGAGAGG 59.891 60.000 0.73 0.00 40.63 3.69
1681 1736 1.590591 TTCCATCAAATCCCCGGAGA 58.409 50.000 0.73 0.00 0.00 3.71
1689 1750 8.936070 TGATGAATCAACATTTCCATCAAATC 57.064 30.769 0.00 0.00 30.91 2.17
1709 1770 4.398988 CGGAACCCATGAGAAATTTGATGA 59.601 41.667 0.00 0.00 0.00 2.92
1726 1787 2.234300 TAGCATTCGAATCCGGAACC 57.766 50.000 9.01 1.64 36.24 3.62
1860 1921 8.383619 GTGTTGTTGCAGAAGATATACTACTTG 58.616 37.037 0.00 0.00 0.00 3.16
2075 2137 2.063266 TCACCGCAATCGACTGTTTAC 58.937 47.619 0.00 0.00 38.10 2.01
2079 2141 0.802222 CGATCACCGCAATCGACTGT 60.802 55.000 0.00 0.00 46.89 3.55
2088 2150 2.135139 GAATAGCAATCGATCACCGCA 58.865 47.619 0.00 0.00 38.37 5.69
2111 2190 4.297510 TCGTCAATTTTTGCCACTCAATG 58.702 39.130 0.00 0.00 34.12 2.82
2113 2192 4.297510 CATCGTCAATTTTTGCCACTCAA 58.702 39.130 0.00 0.00 0.00 3.02
2114 2193 3.305267 CCATCGTCAATTTTTGCCACTCA 60.305 43.478 0.00 0.00 0.00 3.41
2115 2194 3.057596 TCCATCGTCAATTTTTGCCACTC 60.058 43.478 0.00 0.00 0.00 3.51
2117 2196 3.296322 TCCATCGTCAATTTTTGCCAC 57.704 42.857 0.00 0.00 0.00 5.01
2120 2199 3.305094 CAGCATCCATCGTCAATTTTTGC 59.695 43.478 0.00 0.00 0.00 3.68
2121 2200 3.305094 GCAGCATCCATCGTCAATTTTTG 59.695 43.478 0.00 0.00 0.00 2.44
2144 2226 0.398381 GGATCTCCAGTGCCTCTCCT 60.398 60.000 0.00 0.00 35.64 3.69
2146 2228 1.960689 GTAGGATCTCCAGTGCCTCTC 59.039 57.143 0.00 0.00 38.89 3.20
2506 2588 2.436646 GATGGCCGTGTCCTGTGG 60.437 66.667 0.00 0.00 0.00 4.17
2508 2590 2.607750 AGGATGGCCGTGTCCTGT 60.608 61.111 19.92 1.33 43.11 4.00
2669 2765 0.179129 TTAAGTACTGTAGCGGCGGC 60.179 55.000 9.78 8.43 40.37 6.53
2671 2767 4.604976 AGTAATTAAGTACTGTAGCGGCG 58.395 43.478 14.43 0.51 32.97 6.46
2673 2769 8.644318 ATCAAAGTAATTAAGTACTGTAGCGG 57.356 34.615 15.77 0.00 34.50 5.52
2681 2777 9.937175 GGCATTGAGATCAAAGTAATTAAGTAC 57.063 33.333 4.93 4.93 39.55 2.73
2685 2781 7.416664 GGCAGGCATTGAGATCAAAGTAATTAA 60.417 37.037 0.00 0.00 39.55 1.40
2688 2784 4.340381 GGCAGGCATTGAGATCAAAGTAAT 59.660 41.667 0.00 0.00 39.55 1.89
2693 2789 2.097036 CAGGCAGGCATTGAGATCAAA 58.903 47.619 0.00 0.00 39.55 2.69
2713 2809 1.596727 GGATCGAACAAGATCAGCAGC 59.403 52.381 8.89 0.00 46.55 5.25
2714 2810 3.122297 GAGGATCGAACAAGATCAGCAG 58.878 50.000 8.89 0.00 46.55 4.24
2715 2811 3.170791 GAGGATCGAACAAGATCAGCA 57.829 47.619 8.89 0.00 46.55 4.41
2766 2862 3.866703 TGTTAGGGTGTGTGAATGGAA 57.133 42.857 0.00 0.00 0.00 3.53
2804 2900 0.107993 GCAGCATGGACTAGCAGTGA 60.108 55.000 0.00 0.00 35.86 3.41
2857 2953 3.265791 GCTGATGGTTCCAGTAAGTGAG 58.734 50.000 0.00 0.00 34.29 3.51
3117 3214 2.675317 CGGTCCTCATGAAGAACCTGAC 60.675 54.545 15.20 6.21 0.00 3.51
3173 3270 1.195115 TGGTACCTGTCATGGAGAGC 58.805 55.000 14.36 0.00 0.00 4.09
3215 3312 7.761704 GGCAGTTCGTATGAAGATATGATGTAT 59.238 37.037 0.00 0.00 33.98 2.29
3220 3477 5.791336 AGGCAGTTCGTATGAAGATATGA 57.209 39.130 0.00 0.00 33.98 2.15
3221 3478 5.755375 ACAAGGCAGTTCGTATGAAGATATG 59.245 40.000 0.00 0.00 33.98 1.78
3231 3488 5.870978 GGAGTAATAAACAAGGCAGTTCGTA 59.129 40.000 0.00 0.00 0.00 3.43
3489 3751 3.900966 ATTAAGGTACCCACTCCGTTC 57.099 47.619 8.74 0.00 0.00 3.95
3526 3788 3.059257 CGTGCCTGCAACGCATATATTAA 60.059 43.478 11.00 0.00 38.13 1.40
3527 3789 2.478514 CGTGCCTGCAACGCATATATTA 59.521 45.455 11.00 0.00 38.13 0.98
3689 3963 2.814336 GTTGACCTCTTAACCAAGCTGG 59.186 50.000 0.00 0.00 45.02 4.85
3724 3998 9.479549 AATGTATGATATTTCCCATTATGACCC 57.520 33.333 0.00 0.00 0.00 4.46
3885 4362 7.655328 CAGCATAATACTAGTGGAAGAAAGGAG 59.345 40.741 5.39 0.00 0.00 3.69
4013 4491 0.773644 AAAGGCCACCTGTCAGTGAT 59.226 50.000 5.01 0.00 40.34 3.06
4104 4582 5.480642 AGAAGATGAAGTGGATATCGCAT 57.519 39.130 0.00 0.00 0.00 4.73
4280 4758 1.868498 GGCGTTTTGGGGCTTTTAAAC 59.132 47.619 0.00 0.00 0.00 2.01
4282 4760 0.393448 GGGCGTTTTGGGGCTTTTAA 59.607 50.000 0.00 0.00 0.00 1.52
4284 4762 0.470268 TAGGGCGTTTTGGGGCTTTT 60.470 50.000 0.00 0.00 0.00 2.27
4285 4763 1.154221 TAGGGCGTTTTGGGGCTTT 59.846 52.632 0.00 0.00 0.00 3.51
4286 4764 1.605451 GTAGGGCGTTTTGGGGCTT 60.605 57.895 0.00 0.00 0.00 4.35
4287 4765 2.035155 GTAGGGCGTTTTGGGGCT 59.965 61.111 0.00 0.00 0.00 5.19
4288 4766 2.035155 AGTAGGGCGTTTTGGGGC 59.965 61.111 0.00 0.00 0.00 5.80
4290 4768 1.004200 ACGAGTAGGGCGTTTTGGG 60.004 57.895 0.00 0.00 39.18 4.12
4341 5384 2.808906 AAATAAGCCGCCTCCTCTTT 57.191 45.000 0.00 0.00 0.00 2.52
4363 5406 2.037641 GGGCAGTTCTCTTGGCAATTTT 59.962 45.455 0.00 0.00 0.00 1.82
4440 5918 2.365293 TCGGGATCACACATATCCACAG 59.635 50.000 0.00 0.00 44.08 3.66
4470 6327 1.174712 ACTGCACTGCACCCACATTC 61.175 55.000 0.00 0.00 33.79 2.67
4608 6465 0.320683 TGGAGGTGTGCACGATCTTG 60.321 55.000 13.13 0.00 0.00 3.02
4931 6788 1.277842 TGTACATGATGGCCACGAACT 59.722 47.619 8.16 0.00 0.00 3.01
5151 7008 1.482955 CTTGACGCACACGAAGACG 59.517 57.895 0.00 0.00 43.93 4.18
5154 7011 2.551270 GCCTTGACGCACACGAAG 59.449 61.111 0.00 0.00 43.93 3.79
5278 7135 4.828925 GCTCTCCTCGCCCAGCAC 62.829 72.222 0.00 0.00 0.00 4.40
5511 7377 1.299850 CAGCGTGTCCGACTTGTCA 60.300 57.895 0.00 0.00 35.63 3.58
5758 7627 3.031736 AGTTGTAGGCTATGTCGATGGT 58.968 45.455 0.00 0.00 0.00 3.55
5862 7731 1.680338 TCGATGCTAGCAGCTAGACA 58.320 50.000 30.45 25.33 42.97 3.41
5922 7800 8.679100 GCTACTATGTAGGAGTATGTTATCTGG 58.321 40.741 6.83 0.00 36.61 3.86
5931 7809 7.571071 TGACCTAGCTACTATGTAGGAGTAT 57.429 40.000 3.43 0.00 36.61 2.12
5934 7812 6.428771 GTCTTGACCTAGCTACTATGTAGGAG 59.571 46.154 3.43 0.00 37.38 3.69
5935 7813 6.126565 TGTCTTGACCTAGCTACTATGTAGGA 60.127 42.308 3.43 0.00 37.38 2.94
5937 7815 7.445707 TCATGTCTTGACCTAGCTACTATGTAG 59.554 40.741 0.00 0.77 0.00 2.74
5938 7816 7.287810 TCATGTCTTGACCTAGCTACTATGTA 58.712 38.462 0.00 0.00 0.00 2.29
5939 7817 6.129874 TCATGTCTTGACCTAGCTACTATGT 58.870 40.000 0.00 0.00 0.00 2.29
5940 7818 6.641169 TCATGTCTTGACCTAGCTACTATG 57.359 41.667 0.00 0.00 0.00 2.23
6002 8034 4.218635 TCTCTCACGTGCAAAGTCTAAGAT 59.781 41.667 11.67 0.00 0.00 2.40
6008 8040 2.677199 TCATCTCTCACGTGCAAAGTC 58.323 47.619 11.67 0.00 0.00 3.01
6012 8044 1.405933 CCCATCATCTCTCACGTGCAA 60.406 52.381 11.67 0.00 0.00 4.08
6013 8045 0.176449 CCCATCATCTCTCACGTGCA 59.824 55.000 11.67 0.00 0.00 4.57
6014 8046 0.531532 CCCCATCATCTCTCACGTGC 60.532 60.000 11.67 0.00 0.00 5.34
6015 8047 0.531532 GCCCCATCATCTCTCACGTG 60.532 60.000 9.94 9.94 0.00 4.49
6016 8048 0.977627 TGCCCCATCATCTCTCACGT 60.978 55.000 0.00 0.00 0.00 4.49
6017 8049 0.249784 CTGCCCCATCATCTCTCACG 60.250 60.000 0.00 0.00 0.00 4.35
6018 8050 0.108207 CCTGCCCCATCATCTCTCAC 59.892 60.000 0.00 0.00 0.00 3.51
6019 8051 1.703014 GCCTGCCCCATCATCTCTCA 61.703 60.000 0.00 0.00 0.00 3.27
6020 8052 1.072852 GCCTGCCCCATCATCTCTC 59.927 63.158 0.00 0.00 0.00 3.20
6022 8054 2.281345 CGCCTGCCCCATCATCTC 60.281 66.667 0.00 0.00 0.00 2.75
6023 8055 4.575973 GCGCCTGCCCCATCATCT 62.576 66.667 0.00 0.00 33.98 2.90
6024 8056 4.881440 TGCGCCTGCCCCATCATC 62.881 66.667 4.18 0.00 41.78 2.92
6258 8298 3.250040 GTCCAAATTATATGCCGCGTTCT 59.750 43.478 4.92 0.00 0.00 3.01
6263 8303 2.488153 GGGAGTCCAAATTATATGCCGC 59.512 50.000 12.30 0.00 0.00 6.53
6266 8306 6.959639 TTCAAGGGAGTCCAAATTATATGC 57.040 37.500 12.30 0.00 34.83 3.14
6278 8318 6.530887 GTCGTAGTTCTTAATTCAAGGGAGTC 59.469 42.308 0.00 0.00 34.76 3.36
6294 8335 7.062605 TCCGTTTCATAATTCTTGTCGTAGTTC 59.937 37.037 0.00 0.00 0.00 3.01
6296 8337 6.392354 TCCGTTTCATAATTCTTGTCGTAGT 58.608 36.000 0.00 0.00 0.00 2.73
6298 8339 5.808540 CCTCCGTTTCATAATTCTTGTCGTA 59.191 40.000 0.00 0.00 0.00 3.43
6299 8340 4.630069 CCTCCGTTTCATAATTCTTGTCGT 59.370 41.667 0.00 0.00 0.00 4.34
6300 8341 4.868171 TCCTCCGTTTCATAATTCTTGTCG 59.132 41.667 0.00 0.00 0.00 4.35
6301 8342 6.371825 ACTTCCTCCGTTTCATAATTCTTGTC 59.628 38.462 0.00 0.00 0.00 3.18
6302 8343 6.238648 ACTTCCTCCGTTTCATAATTCTTGT 58.761 36.000 0.00 0.00 0.00 3.16
6303 8344 6.743575 ACTTCCTCCGTTTCATAATTCTTG 57.256 37.500 0.00 0.00 0.00 3.02
6358 8401 9.431887 TGTGGTTCATTCTCTAATAGTACAAAC 57.568 33.333 0.00 0.00 0.00 2.93
6369 8412 4.641396 CAGTTGGTGTGGTTCATTCTCTA 58.359 43.478 0.00 0.00 0.00 2.43
6406 8449 8.232913 TGTTTAAATCTGGAAGCAAAACTAGT 57.767 30.769 0.00 0.00 0.00 2.57
6409 8452 7.725251 TGATGTTTAAATCTGGAAGCAAAACT 58.275 30.769 0.00 0.00 0.00 2.66
6429 8472 4.981674 CCGTGTGTTTAGCATTTTTGATGT 59.018 37.500 0.00 0.00 0.00 3.06
6432 8475 3.243569 CCCCGTGTGTTTAGCATTTTTGA 60.244 43.478 0.00 0.00 0.00 2.69
6433 8476 3.056304 CCCCGTGTGTTTAGCATTTTTG 58.944 45.455 0.00 0.00 0.00 2.44
6434 8477 2.547007 GCCCCGTGTGTTTAGCATTTTT 60.547 45.455 0.00 0.00 0.00 1.94
6435 8478 1.000394 GCCCCGTGTGTTTAGCATTTT 60.000 47.619 0.00 0.00 0.00 1.82
6436 8479 0.601057 GCCCCGTGTGTTTAGCATTT 59.399 50.000 0.00 0.00 0.00 2.32
6437 8480 0.251165 AGCCCCGTGTGTTTAGCATT 60.251 50.000 0.00 0.00 0.00 3.56
6438 8481 0.960364 CAGCCCCGTGTGTTTAGCAT 60.960 55.000 0.00 0.00 0.00 3.79
6439 8482 1.599518 CAGCCCCGTGTGTTTAGCA 60.600 57.895 0.00 0.00 0.00 3.49
6440 8483 1.170290 AACAGCCCCGTGTGTTTAGC 61.170 55.000 0.00 0.00 32.93 3.09
6441 8484 1.802365 GTAACAGCCCCGTGTGTTTAG 59.198 52.381 0.00 0.00 37.96 1.85
6442 8485 1.873069 CGTAACAGCCCCGTGTGTTTA 60.873 52.381 0.00 0.00 37.96 2.01
6443 8486 1.161563 CGTAACAGCCCCGTGTGTTT 61.162 55.000 0.00 0.00 37.96 2.83
6444 8487 1.595929 CGTAACAGCCCCGTGTGTT 60.596 57.895 0.00 0.00 40.08 3.32
6445 8488 2.029964 CGTAACAGCCCCGTGTGT 59.970 61.111 0.00 0.00 0.00 3.72
6446 8489 2.740826 CCGTAACAGCCCCGTGTG 60.741 66.667 0.00 0.00 0.00 3.82
6447 8490 4.011517 CCCGTAACAGCCCCGTGT 62.012 66.667 0.00 0.00 0.00 4.49
6448 8491 4.770874 CCCCGTAACAGCCCCGTG 62.771 72.222 0.00 0.00 0.00 4.94
6450 8493 3.556298 AAACCCCGTAACAGCCCCG 62.556 63.158 0.00 0.00 0.00 5.73
6451 8494 1.228644 AAAACCCCGTAACAGCCCC 60.229 57.895 0.00 0.00 0.00 5.80
6452 8495 1.246056 GGAAAACCCCGTAACAGCCC 61.246 60.000 0.00 0.00 0.00 5.19
6453 8496 2.260247 GGAAAACCCCGTAACAGCC 58.740 57.895 0.00 0.00 0.00 4.85
6464 8507 5.622180 GATGGAGAGTATTAGGGGAAAACC 58.378 45.833 0.00 0.00 39.11 3.27
6465 8508 5.298347 CGATGGAGAGTATTAGGGGAAAAC 58.702 45.833 0.00 0.00 0.00 2.43
6466 8509 4.202326 GCGATGGAGAGTATTAGGGGAAAA 60.202 45.833 0.00 0.00 0.00 2.29
6467 8510 3.323979 GCGATGGAGAGTATTAGGGGAAA 59.676 47.826 0.00 0.00 0.00 3.13
6468 8511 2.897969 GCGATGGAGAGTATTAGGGGAA 59.102 50.000 0.00 0.00 0.00 3.97
6469 8512 2.526432 GCGATGGAGAGTATTAGGGGA 58.474 52.381 0.00 0.00 0.00 4.81
6470 8513 1.550976 GGCGATGGAGAGTATTAGGGG 59.449 57.143 0.00 0.00 0.00 4.79
6471 8514 1.550976 GGGCGATGGAGAGTATTAGGG 59.449 57.143 0.00 0.00 0.00 3.53
6472 8515 1.550976 GGGGCGATGGAGAGTATTAGG 59.449 57.143 0.00 0.00 0.00 2.69
6473 8516 1.550976 GGGGGCGATGGAGAGTATTAG 59.449 57.143 0.00 0.00 0.00 1.73
6474 8517 1.149288 AGGGGGCGATGGAGAGTATTA 59.851 52.381 0.00 0.00 0.00 0.98
6475 8518 0.104934 AGGGGGCGATGGAGAGTATT 60.105 55.000 0.00 0.00 0.00 1.89
6476 8519 0.104934 AAGGGGGCGATGGAGAGTAT 60.105 55.000 0.00 0.00 0.00 2.12
6477 8520 1.048724 CAAGGGGGCGATGGAGAGTA 61.049 60.000 0.00 0.00 0.00 2.59
6478 8521 2.041265 AAGGGGGCGATGGAGAGT 59.959 61.111 0.00 0.00 0.00 3.24
6479 8522 1.414061 ATCAAGGGGGCGATGGAGAG 61.414 60.000 0.00 0.00 0.00 3.20
6480 8523 0.988145 AATCAAGGGGGCGATGGAGA 60.988 55.000 0.00 0.00 0.00 3.71
6481 8524 0.106519 AAATCAAGGGGGCGATGGAG 60.107 55.000 0.00 0.00 0.00 3.86
6482 8525 0.334676 AAAATCAAGGGGGCGATGGA 59.665 50.000 0.00 0.00 0.00 3.41
6483 8526 0.746659 GAAAATCAAGGGGGCGATGG 59.253 55.000 0.00 0.00 0.00 3.51
6484 8527 1.406539 CTGAAAATCAAGGGGGCGATG 59.593 52.381 0.00 0.00 0.00 3.84
6485 8528 1.767759 CTGAAAATCAAGGGGGCGAT 58.232 50.000 0.00 0.00 0.00 4.58
6486 8529 0.965363 GCTGAAAATCAAGGGGGCGA 60.965 55.000 0.00 0.00 0.00 5.54
6487 8530 1.512694 GCTGAAAATCAAGGGGGCG 59.487 57.895 0.00 0.00 0.00 6.13
6488 8531 1.512694 CGCTGAAAATCAAGGGGGC 59.487 57.895 0.00 0.00 0.00 5.80
6489 8532 1.322538 CCCGCTGAAAATCAAGGGGG 61.323 60.000 10.05 10.05 39.38 5.40
6490 8533 2.192605 CCCGCTGAAAATCAAGGGG 58.807 57.895 10.91 6.77 39.38 4.79
6491 8534 0.611896 ACCCCGCTGAAAATCAAGGG 60.612 55.000 11.53 11.53 41.39 3.95
6492 8535 0.527565 CACCCCGCTGAAAATCAAGG 59.472 55.000 0.00 0.00 0.00 3.61
6493 8536 0.527565 CCACCCCGCTGAAAATCAAG 59.472 55.000 0.00 0.00 0.00 3.02
6494 8537 0.897863 CCCACCCCGCTGAAAATCAA 60.898 55.000 0.00 0.00 0.00 2.57
6495 8538 1.304052 CCCACCCCGCTGAAAATCA 60.304 57.895 0.00 0.00 0.00 2.57
6496 8539 2.052104 CCCCACCCCGCTGAAAATC 61.052 63.158 0.00 0.00 0.00 2.17
6497 8540 2.037208 CCCCACCCCGCTGAAAAT 59.963 61.111 0.00 0.00 0.00 1.82
6498 8541 4.986708 GCCCCACCCCGCTGAAAA 62.987 66.667 0.00 0.00 0.00 2.29
6513 8556 1.212250 TTAAGAGGGAGGTTGGGGCC 61.212 60.000 0.00 0.00 0.00 5.80
6514 8557 0.927029 ATTAAGAGGGAGGTTGGGGC 59.073 55.000 0.00 0.00 0.00 5.80
6515 8558 1.495148 GGATTAAGAGGGAGGTTGGGG 59.505 57.143 0.00 0.00 0.00 4.96
6516 8559 2.205342 TGGATTAAGAGGGAGGTTGGG 58.795 52.381 0.00 0.00 0.00 4.12
6517 8560 4.079787 TGATTGGATTAAGAGGGAGGTTGG 60.080 45.833 0.00 0.00 0.00 3.77
6518 8561 5.116084 TGATTGGATTAAGAGGGAGGTTG 57.884 43.478 0.00 0.00 0.00 3.77
6519 8562 5.796502 TTGATTGGATTAAGAGGGAGGTT 57.203 39.130 0.00 0.00 0.00 3.50
6520 8563 5.492524 TCTTTGATTGGATTAAGAGGGAGGT 59.507 40.000 0.00 0.00 0.00 3.85
6521 8564 6.006275 TCTTTGATTGGATTAAGAGGGAGG 57.994 41.667 0.00 0.00 0.00 4.30
6522 8565 7.469732 GCAATCTTTGATTGGATTAAGAGGGAG 60.470 40.741 18.23 0.00 31.86 4.30
6523 8566 6.322201 GCAATCTTTGATTGGATTAAGAGGGA 59.678 38.462 18.23 0.00 31.86 4.20
6524 8567 6.462067 GGCAATCTTTGATTGGATTAAGAGGG 60.462 42.308 18.23 0.00 31.86 4.30
6525 8568 6.097270 TGGCAATCTTTGATTGGATTAAGAGG 59.903 38.462 18.23 0.00 31.86 3.69
6526 8569 7.104043 TGGCAATCTTTGATTGGATTAAGAG 57.896 36.000 18.23 0.00 31.86 2.85
6527 8570 6.097270 CCTGGCAATCTTTGATTGGATTAAGA 59.903 38.462 18.23 0.00 31.86 2.10
6528 8571 6.127253 ACCTGGCAATCTTTGATTGGATTAAG 60.127 38.462 18.23 0.00 31.86 1.85
6529 8572 5.721000 ACCTGGCAATCTTTGATTGGATTAA 59.279 36.000 18.23 0.00 31.86 1.40
6530 8573 5.271598 ACCTGGCAATCTTTGATTGGATTA 58.728 37.500 18.23 0.00 31.86 1.75
6531 8574 4.098894 ACCTGGCAATCTTTGATTGGATT 58.901 39.130 18.23 0.00 33.09 3.01
6532 8575 3.703052 GACCTGGCAATCTTTGATTGGAT 59.297 43.478 18.23 0.00 0.00 3.41
6533 8576 3.091545 GACCTGGCAATCTTTGATTGGA 58.908 45.455 18.23 0.00 0.00 3.53
6534 8577 2.827322 TGACCTGGCAATCTTTGATTGG 59.173 45.455 18.23 7.38 0.00 3.16
6535 8578 4.524316 TTGACCTGGCAATCTTTGATTG 57.476 40.909 13.97 13.97 0.00 2.67
6536 8579 6.837568 AGATATTGACCTGGCAATCTTTGATT 59.162 34.615 16.14 0.00 39.15 2.57
6537 8580 6.371278 AGATATTGACCTGGCAATCTTTGAT 58.629 36.000 16.14 7.37 39.15 2.57
6538 8581 5.759059 AGATATTGACCTGGCAATCTTTGA 58.241 37.500 16.14 3.72 39.15 2.69
6539 8582 6.461110 AAGATATTGACCTGGCAATCTTTG 57.539 37.500 16.14 0.00 39.15 2.77
6540 8583 6.097412 GGAAAGATATTGACCTGGCAATCTTT 59.903 38.462 20.13 20.13 38.66 2.52
6541 8584 5.595952 GGAAAGATATTGACCTGGCAATCTT 59.404 40.000 16.14 13.27 39.15 2.40
6542 8585 5.136105 GGAAAGATATTGACCTGGCAATCT 58.864 41.667 16.14 9.46 39.15 2.40
6543 8586 4.023707 CGGAAAGATATTGACCTGGCAATC 60.024 45.833 16.14 7.59 39.15 2.67
6544 8587 3.885297 CGGAAAGATATTGACCTGGCAAT 59.115 43.478 16.65 16.65 41.15 3.56
6545 8588 3.278574 CGGAAAGATATTGACCTGGCAA 58.721 45.455 6.12 6.12 0.00 4.52
6546 8589 2.238646 ACGGAAAGATATTGACCTGGCA 59.761 45.455 0.00 0.00 0.00 4.92
6547 8590 2.919228 ACGGAAAGATATTGACCTGGC 58.081 47.619 0.00 0.00 0.00 4.85
6548 8591 5.007724 GCTTTACGGAAAGATATTGACCTGG 59.992 44.000 24.47 0.00 44.23 4.45
6549 8592 5.817816 AGCTTTACGGAAAGATATTGACCTG 59.182 40.000 24.47 0.00 44.23 4.00
6550 8593 5.990668 AGCTTTACGGAAAGATATTGACCT 58.009 37.500 24.47 5.59 44.23 3.85
6551 8594 6.679327 AAGCTTTACGGAAAGATATTGACC 57.321 37.500 24.47 3.20 44.23 4.02
6552 8595 8.880750 ACTTAAGCTTTACGGAAAGATATTGAC 58.119 33.333 24.47 3.95 44.23 3.18
6559 8602 9.498176 AGATTTTACTTAAGCTTTACGGAAAGA 57.502 29.630 24.47 0.00 44.23 2.52
6560 8603 9.756461 GAGATTTTACTTAAGCTTTACGGAAAG 57.244 33.333 16.16 16.16 44.29 2.62
6561 8604 8.437742 CGAGATTTTACTTAAGCTTTACGGAAA 58.562 33.333 3.20 0.00 0.00 3.13
6562 8605 7.599998 ACGAGATTTTACTTAAGCTTTACGGAA 59.400 33.333 3.20 0.00 0.00 4.30
6563 8606 7.092716 ACGAGATTTTACTTAAGCTTTACGGA 58.907 34.615 3.20 0.00 0.00 4.69
6564 8607 7.287050 ACGAGATTTTACTTAAGCTTTACGG 57.713 36.000 3.20 0.00 0.00 4.02
6565 8608 8.430063 TCAACGAGATTTTACTTAAGCTTTACG 58.570 33.333 3.20 0.00 0.00 3.18
6568 8611 8.784043 ACATCAACGAGATTTTACTTAAGCTTT 58.216 29.630 3.20 0.00 33.72 3.51
6569 8612 8.324163 ACATCAACGAGATTTTACTTAAGCTT 57.676 30.769 3.48 3.48 33.72 3.74
6570 8613 7.907214 ACATCAACGAGATTTTACTTAAGCT 57.093 32.000 1.29 0.00 33.72 3.74
6571 8614 7.846592 GCTACATCAACGAGATTTTACTTAAGC 59.153 37.037 1.29 0.00 33.72 3.09
6572 8615 8.869897 TGCTACATCAACGAGATTTTACTTAAG 58.130 33.333 0.00 0.00 33.72 1.85
6573 8616 8.766000 TGCTACATCAACGAGATTTTACTTAA 57.234 30.769 0.00 0.00 33.72 1.85
6574 8617 8.942338 ATGCTACATCAACGAGATTTTACTTA 57.058 30.769 0.00 0.00 33.72 2.24
6575 8618 7.849804 ATGCTACATCAACGAGATTTTACTT 57.150 32.000 0.00 0.00 33.72 2.24
6576 8619 7.677276 GCAATGCTACATCAACGAGATTTTACT 60.677 37.037 0.00 0.00 33.72 2.24
6577 8620 6.412072 GCAATGCTACATCAACGAGATTTTAC 59.588 38.462 0.00 0.00 33.72 2.01
6578 8621 6.316140 AGCAATGCTACATCAACGAGATTTTA 59.684 34.615 5.69 0.00 36.99 1.52
6579 8622 5.124457 AGCAATGCTACATCAACGAGATTTT 59.876 36.000 5.69 0.00 36.99 1.82
6580 8623 4.637534 AGCAATGCTACATCAACGAGATTT 59.362 37.500 5.69 0.00 36.99 2.17
6581 8624 4.194640 AGCAATGCTACATCAACGAGATT 58.805 39.130 5.69 0.00 36.99 2.40
6582 8625 3.801698 AGCAATGCTACATCAACGAGAT 58.198 40.909 5.69 0.00 36.99 2.75
6583 8626 3.118992 AGAGCAATGCTACATCAACGAGA 60.119 43.478 8.12 0.00 39.88 4.04
6584 8627 3.193263 AGAGCAATGCTACATCAACGAG 58.807 45.455 8.12 0.00 39.88 4.18
6585 8628 3.251479 AGAGCAATGCTACATCAACGA 57.749 42.857 8.12 0.00 39.88 3.85
6586 8629 4.346734 AAAGAGCAATGCTACATCAACG 57.653 40.909 8.12 0.00 39.88 4.10
6601 8644 5.528902 AAGGGGAACTTGTGCTTAAAGAGC 61.529 45.833 1.41 0.00 44.37 4.09
6602 8645 3.756117 AGGGGAACTTGTGCTTAAAGAG 58.244 45.455 1.41 0.00 0.00 2.85
6603 8646 3.876309 AGGGGAACTTGTGCTTAAAGA 57.124 42.857 1.41 0.00 0.00 2.52
6604 8647 3.255888 GGAAGGGGAACTTGTGCTTAAAG 59.744 47.826 0.00 0.00 40.21 1.85
6605 8648 3.227614 GGAAGGGGAACTTGTGCTTAAA 58.772 45.455 0.00 0.00 40.21 1.52
6606 8649 2.175931 TGGAAGGGGAACTTGTGCTTAA 59.824 45.455 0.00 0.00 40.21 1.85
6607 8650 1.777878 TGGAAGGGGAACTTGTGCTTA 59.222 47.619 0.00 0.00 40.21 3.09
6608 8651 0.555769 TGGAAGGGGAACTTGTGCTT 59.444 50.000 0.00 0.00 40.21 3.91
6609 8652 0.555769 TTGGAAGGGGAACTTGTGCT 59.444 50.000 0.00 0.00 40.21 4.40
6610 8653 0.673985 GTTGGAAGGGGAACTTGTGC 59.326 55.000 0.00 0.00 40.21 4.57
6611 8654 2.065899 TGTTGGAAGGGGAACTTGTG 57.934 50.000 0.00 0.00 40.21 3.33
6612 8655 3.230976 GAATGTTGGAAGGGGAACTTGT 58.769 45.455 0.00 0.00 40.21 3.16
6613 8656 2.562738 GGAATGTTGGAAGGGGAACTTG 59.437 50.000 0.00 0.00 40.21 3.16
6614 8657 2.492753 GGGAATGTTGGAAGGGGAACTT 60.493 50.000 0.00 0.00 43.65 2.66
6615 8658 1.077169 GGGAATGTTGGAAGGGGAACT 59.923 52.381 0.00 0.00 0.00 3.01
6663 8876 4.651045 AGGGAACAATGCCATTCTTAATCC 59.349 41.667 0.00 0.00 40.09 3.01
6675 8888 3.392882 CAACTTTCCAAGGGAACAATGC 58.607 45.455 0.00 0.00 41.87 3.56
6736 8950 9.466497 ACAGAGATATTTGTTGGAACATGTAAT 57.534 29.630 0.00 0.00 39.30 1.89
6786 9001 5.242838 ACCTCACAAACAAAAACACTGAAGA 59.757 36.000 0.00 0.00 0.00 2.87
6787 9002 5.469479 ACCTCACAAACAAAAACACTGAAG 58.531 37.500 0.00 0.00 0.00 3.02
6788 9003 5.461032 ACCTCACAAACAAAAACACTGAA 57.539 34.783 0.00 0.00 0.00 3.02
6789 9004 6.601613 AGATACCTCACAAACAAAAACACTGA 59.398 34.615 0.00 0.00 0.00 3.41
6790 9005 6.795399 AGATACCTCACAAACAAAAACACTG 58.205 36.000 0.00 0.00 0.00 3.66
6791 9006 6.039382 GGAGATACCTCACAAACAAAAACACT 59.961 38.462 0.00 0.00 41.20 3.55
6792 9007 6.206498 GGAGATACCTCACAAACAAAAACAC 58.794 40.000 0.00 0.00 41.20 3.32
6845 9062 4.262617 GCCCAACAAAACTTACCCAAAAA 58.737 39.130 0.00 0.00 0.00 1.94
6846 9063 3.263425 TGCCCAACAAAACTTACCCAAAA 59.737 39.130 0.00 0.00 0.00 2.44
6847 9064 2.838202 TGCCCAACAAAACTTACCCAAA 59.162 40.909 0.00 0.00 0.00 3.28
6848 9065 2.467880 TGCCCAACAAAACTTACCCAA 58.532 42.857 0.00 0.00 0.00 4.12
6849 9066 2.160721 TGCCCAACAAAACTTACCCA 57.839 45.000 0.00 0.00 0.00 4.51
6850 9067 3.545366 TTTGCCCAACAAAACTTACCC 57.455 42.857 0.00 0.00 45.22 3.69
6858 9075 5.091261 ACATACAAAGTTTGCCCAACAAA 57.909 34.783 15.59 0.00 46.01 2.83
6859 9076 4.404073 AGACATACAAAGTTTGCCCAACAA 59.596 37.500 15.59 0.00 37.93 2.83
6860 9077 3.957497 AGACATACAAAGTTTGCCCAACA 59.043 39.130 15.59 0.00 37.93 3.33
6861 9078 4.037446 TGAGACATACAAAGTTTGCCCAAC 59.963 41.667 15.59 5.26 35.32 3.77
6862 9079 4.211125 TGAGACATACAAAGTTTGCCCAA 58.789 39.130 15.59 0.00 0.00 4.12
6863 9080 3.820467 CTGAGACATACAAAGTTTGCCCA 59.180 43.478 15.59 1.74 0.00 5.36
6864 9081 3.366374 GCTGAGACATACAAAGTTTGCCC 60.366 47.826 15.59 1.06 0.00 5.36
6865 9082 3.503748 AGCTGAGACATACAAAGTTTGCC 59.496 43.478 15.59 0.73 0.00 4.52
6866 9083 4.756084 AGCTGAGACATACAAAGTTTGC 57.244 40.909 15.59 0.00 0.00 3.68
6867 9084 7.591426 GGTTTTAGCTGAGACATACAAAGTTTG 59.409 37.037 14.13 14.13 0.00 2.93
6868 9085 7.502561 AGGTTTTAGCTGAGACATACAAAGTTT 59.497 33.333 0.00 0.00 0.00 2.66
6869 9086 6.998673 AGGTTTTAGCTGAGACATACAAAGTT 59.001 34.615 0.00 0.00 0.00 2.66
6870 9087 6.534634 AGGTTTTAGCTGAGACATACAAAGT 58.465 36.000 0.00 0.00 0.00 2.66
6871 9088 6.876257 AGAGGTTTTAGCTGAGACATACAAAG 59.124 38.462 0.00 0.00 0.00 2.77
6872 9089 6.769512 AGAGGTTTTAGCTGAGACATACAAA 58.230 36.000 0.00 0.00 0.00 2.83
6873 9090 6.360370 AGAGGTTTTAGCTGAGACATACAA 57.640 37.500 0.00 0.00 0.00 2.41
6874 9091 5.105310 GGAGAGGTTTTAGCTGAGACATACA 60.105 44.000 0.00 0.00 0.00 2.29
6875 9092 5.128008 AGGAGAGGTTTTAGCTGAGACATAC 59.872 44.000 0.00 0.00 0.00 2.39
6876 9093 5.273208 AGGAGAGGTTTTAGCTGAGACATA 58.727 41.667 0.00 0.00 0.00 2.29
6877 9094 4.100373 AGGAGAGGTTTTAGCTGAGACAT 58.900 43.478 0.00 0.00 0.00 3.06
6878 9095 3.511477 AGGAGAGGTTTTAGCTGAGACA 58.489 45.455 0.00 0.00 0.00 3.41
6879 9096 4.249661 CAAGGAGAGGTTTTAGCTGAGAC 58.750 47.826 0.00 0.00 0.00 3.36
6880 9097 3.261897 CCAAGGAGAGGTTTTAGCTGAGA 59.738 47.826 0.00 0.00 0.00 3.27
6881 9098 3.261897 TCCAAGGAGAGGTTTTAGCTGAG 59.738 47.826 0.00 0.00 0.00 3.35
6882 9099 3.008049 GTCCAAGGAGAGGTTTTAGCTGA 59.992 47.826 0.00 0.00 0.00 4.26
6883 9100 3.244561 TGTCCAAGGAGAGGTTTTAGCTG 60.245 47.826 0.00 0.00 0.00 4.24
6884 9101 2.979678 TGTCCAAGGAGAGGTTTTAGCT 59.020 45.455 0.00 0.00 0.00 3.32
6885 9102 3.244596 ACTGTCCAAGGAGAGGTTTTAGC 60.245 47.826 16.55 0.00 39.49 3.09
6886 9103 4.625607 ACTGTCCAAGGAGAGGTTTTAG 57.374 45.455 16.55 0.00 39.49 1.85
6887 9104 4.445735 CCAACTGTCCAAGGAGAGGTTTTA 60.446 45.833 16.55 0.00 39.49 1.52
6888 9105 3.555966 CAACTGTCCAAGGAGAGGTTTT 58.444 45.455 16.55 0.76 39.49 2.43
6889 9106 2.158608 CCAACTGTCCAAGGAGAGGTTT 60.159 50.000 16.55 1.42 39.49 3.27
6890 9107 1.421646 CCAACTGTCCAAGGAGAGGTT 59.578 52.381 16.55 6.71 39.49 3.50
6891 9108 1.059913 CCAACTGTCCAAGGAGAGGT 58.940 55.000 16.55 8.08 39.49 3.85
6892 9109 0.322008 GCCAACTGTCCAAGGAGAGG 60.322 60.000 16.55 2.43 39.49 3.69
6893 9110 0.322008 GGCCAACTGTCCAAGGAGAG 60.322 60.000 11.38 11.38 40.78 3.20
6894 9111 1.761174 GGCCAACTGTCCAAGGAGA 59.239 57.895 0.00 0.00 0.00 3.71
6895 9112 1.303643 GGGCCAACTGTCCAAGGAG 60.304 63.158 4.39 0.00 0.00 3.69
6896 9113 1.360393 AAGGGCCAACTGTCCAAGGA 61.360 55.000 6.18 0.00 0.00 3.36
6897 9114 1.153756 AAGGGCCAACTGTCCAAGG 59.846 57.895 6.18 0.00 0.00 3.61
6898 9115 0.178992 TCAAGGGCCAACTGTCCAAG 60.179 55.000 6.18 0.00 0.00 3.61
6899 9116 0.482446 ATCAAGGGCCAACTGTCCAA 59.518 50.000 6.18 0.00 0.00 3.53
6900 9117 1.004277 GTATCAAGGGCCAACTGTCCA 59.996 52.381 6.18 0.00 0.00 4.02
6901 9118 1.282157 AGTATCAAGGGCCAACTGTCC 59.718 52.381 6.18 0.00 0.00 4.02
6902 9119 2.789409 AGTATCAAGGGCCAACTGTC 57.211 50.000 6.18 0.00 0.00 3.51
6903 9120 3.525800 AAAGTATCAAGGGCCAACTGT 57.474 42.857 6.18 0.00 0.00 3.55
6904 9121 3.573967 ACAAAAGTATCAAGGGCCAACTG 59.426 43.478 6.18 0.00 0.00 3.16
6905 9122 3.844640 ACAAAAGTATCAAGGGCCAACT 58.155 40.909 6.18 0.00 0.00 3.16
6906 9123 4.556233 GAACAAAAGTATCAAGGGCCAAC 58.444 43.478 6.18 0.00 0.00 3.77
6907 9124 3.576550 GGAACAAAAGTATCAAGGGCCAA 59.423 43.478 6.18 0.00 0.00 4.52
6908 9125 3.161866 GGAACAAAAGTATCAAGGGCCA 58.838 45.455 6.18 0.00 0.00 5.36
6909 9126 3.161866 TGGAACAAAAGTATCAAGGGCC 58.838 45.455 0.00 0.00 31.92 5.80
6924 9141 1.882311 GCCATGTTGCGATGGAACA 59.118 52.632 12.24 6.35 45.24 3.18
6925 9142 4.792106 GCCATGTTGCGATGGAAC 57.208 55.556 12.24 0.00 45.24 3.62
6933 9150 2.676471 ACTTCCCCGCCATGTTGC 60.676 61.111 0.00 0.00 0.00 4.17
6934 9151 1.002134 AGACTTCCCCGCCATGTTG 60.002 57.895 0.00 0.00 0.00 3.33
6935 9152 1.002134 CAGACTTCCCCGCCATGTT 60.002 57.895 0.00 0.00 0.00 2.71
6936 9153 2.671070 CAGACTTCCCCGCCATGT 59.329 61.111 0.00 0.00 0.00 3.21
6937 9154 2.124570 CCAGACTTCCCCGCCATG 60.125 66.667 0.00 0.00 0.00 3.66
6938 9155 4.115199 GCCAGACTTCCCCGCCAT 62.115 66.667 0.00 0.00 0.00 4.40
6941 9158 3.645268 AATGGCCAGACTTCCCCGC 62.645 63.158 13.05 0.00 0.00 6.13
6942 9159 1.000896 AAATGGCCAGACTTCCCCG 60.001 57.895 13.05 0.00 0.00 5.73
6943 9160 1.032114 CGAAATGGCCAGACTTCCCC 61.032 60.000 13.05 0.00 0.00 4.81
6944 9161 1.032114 CCGAAATGGCCAGACTTCCC 61.032 60.000 13.05 0.00 0.00 3.97
6945 9162 1.032114 CCCGAAATGGCCAGACTTCC 61.032 60.000 13.05 0.00 35.87 3.46
6946 9163 0.322546 ACCCGAAATGGCCAGACTTC 60.323 55.000 13.05 12.88 35.87 3.01
6947 9164 0.322546 GACCCGAAATGGCCAGACTT 60.323 55.000 13.05 4.13 35.87 3.01
6948 9165 1.299976 GACCCGAAATGGCCAGACT 59.700 57.895 13.05 0.00 35.87 3.24
6949 9166 0.394352 ATGACCCGAAATGGCCAGAC 60.394 55.000 13.05 3.91 35.87 3.51
6950 9167 1.208706 TATGACCCGAAATGGCCAGA 58.791 50.000 13.05 0.00 35.87 3.86
6951 9168 1.881973 CATATGACCCGAAATGGCCAG 59.118 52.381 13.05 0.00 35.87 4.85
6952 9169 1.492599 TCATATGACCCGAAATGGCCA 59.507 47.619 8.56 8.56 35.87 5.36
6953 9170 2.270352 TCATATGACCCGAAATGGCC 57.730 50.000 0.00 0.00 35.87 5.36
6954 9171 3.476552 TCTTCATATGACCCGAAATGGC 58.523 45.455 4.48 0.00 35.87 4.40
6955 9172 8.478066 TCTATATCTTCATATGACCCGAAATGG 58.522 37.037 4.48 0.00 37.55 3.16
6956 9173 9.875691 TTCTATATCTTCATATGACCCGAAATG 57.124 33.333 4.48 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.