Multiple sequence alignment - TraesCS1D01G319500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G319500 chr1D 100.000 3597 0 0 1 3597 413661296 413664892 0.000000e+00 6643.0
1 TraesCS1D01G319500 chr1D 86.515 660 85 4 2835 3492 401161910 401162567 0.000000e+00 723.0
2 TraesCS1D01G319500 chr1B 95.883 2016 61 7 736 2749 558087089 558089084 0.000000e+00 3243.0
3 TraesCS1D01G319500 chr1A 96.439 1966 51 9 746 2706 510446115 510448066 0.000000e+00 3225.0
4 TraesCS1D01G319500 chr1A 86.061 660 87 5 2835 3492 589497490 589496834 0.000000e+00 704.0
5 TraesCS1D01G319500 chr1A 76.534 277 35 19 284 539 510444561 510444828 1.360000e-24 124.0
6 TraesCS1D01G319500 chrUn 95.232 776 23 7 2835 3597 93008454 93009228 0.000000e+00 1216.0
7 TraesCS1D01G319500 chr3D 96.196 736 25 3 2863 3597 7162934 7162201 0.000000e+00 1201.0
8 TraesCS1D01G319500 chr2A 92.539 764 50 5 2835 3597 159193959 159193202 0.000000e+00 1088.0
9 TraesCS1D01G319500 chr2A 86.061 660 88 4 2835 3492 579864227 579864884 0.000000e+00 706.0
10 TraesCS1D01G319500 chr2B 91.242 765 64 3 2835 3597 145434722 145433959 0.000000e+00 1038.0
11 TraesCS1D01G319500 chr7B 93.202 662 43 2 2835 3495 111316430 111317090 0.000000e+00 972.0
12 TraesCS1D01G319500 chr3A 85.973 663 89 4 2835 3495 90374112 90373452 0.000000e+00 706.0
13 TraesCS1D01G319500 chr5B 97.619 42 1 0 2658 2699 142528919 142528878 4.980000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G319500 chr1D 413661296 413664892 3596 False 6643.0 6643 100.0000 1 3597 1 chr1D.!!$F2 3596
1 TraesCS1D01G319500 chr1D 401161910 401162567 657 False 723.0 723 86.5150 2835 3492 1 chr1D.!!$F1 657
2 TraesCS1D01G319500 chr1B 558087089 558089084 1995 False 3243.0 3243 95.8830 736 2749 1 chr1B.!!$F1 2013
3 TraesCS1D01G319500 chr1A 510444561 510448066 3505 False 1674.5 3225 86.4865 284 2706 2 chr1A.!!$F1 2422
4 TraesCS1D01G319500 chr1A 589496834 589497490 656 True 704.0 704 86.0610 2835 3492 1 chr1A.!!$R1 657
5 TraesCS1D01G319500 chrUn 93008454 93009228 774 False 1216.0 1216 95.2320 2835 3597 1 chrUn.!!$F1 762
6 TraesCS1D01G319500 chr3D 7162201 7162934 733 True 1201.0 1201 96.1960 2863 3597 1 chr3D.!!$R1 734
7 TraesCS1D01G319500 chr2A 159193202 159193959 757 True 1088.0 1088 92.5390 2835 3597 1 chr2A.!!$R1 762
8 TraesCS1D01G319500 chr2A 579864227 579864884 657 False 706.0 706 86.0610 2835 3492 1 chr2A.!!$F1 657
9 TraesCS1D01G319500 chr2B 145433959 145434722 763 True 1038.0 1038 91.2420 2835 3597 1 chr2B.!!$R1 762
10 TraesCS1D01G319500 chr7B 111316430 111317090 660 False 972.0 972 93.2020 2835 3495 1 chr7B.!!$F1 660
11 TraesCS1D01G319500 chr3A 90373452 90374112 660 True 706.0 706 85.9730 2835 3495 1 chr3A.!!$R1 660

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
134 135 0.030369 GGATCGATACAAGACCGCGT 59.970 55.0 4.92 0.0 0.00 6.01 F
554 577 0.031721 GACTCCACGGACGACAAAGT 59.968 55.0 0.00 0.0 0.00 2.66 F
723 1637 0.037160 GGGCGAAGGTGTTTTCCCTA 59.963 55.0 0.00 0.0 32.29 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1027 2135 0.178068 GAAGGCCAATCGCTACAGGA 59.822 55.0 5.01 0.0 37.74 3.86 R
1817 2925 0.887387 GGTGCACGCCTTTGGACTTA 60.887 55.0 11.45 0.0 37.91 2.24 R
2618 3726 0.240945 GTTCTTCCACCGTTGCCATG 59.759 55.0 0.00 0.0 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.451544 GGGTTAATGCTGGGCCAA 57.548 55.556 8.04 0.00 0.00 4.52
18 19 2.201927 GGGTTAATGCTGGGCCAAG 58.798 57.895 8.04 1.30 0.00 3.61
19 20 1.329913 GGGTTAATGCTGGGCCAAGG 61.330 60.000 9.87 0.00 0.00 3.61
20 21 1.517361 GTTAATGCTGGGCCAAGGC 59.483 57.895 9.87 9.56 41.06 4.35
21 22 1.078166 TTAATGCTGGGCCAAGGCA 59.922 52.632 21.05 21.05 44.11 4.75
22 23 0.543883 TTAATGCTGGGCCAAGGCAA 60.544 50.000 22.36 6.32 44.11 4.52
23 24 0.325484 TAATGCTGGGCCAAGGCAAT 60.325 50.000 22.36 17.20 44.11 3.56
24 25 1.619807 AATGCTGGGCCAAGGCAATC 61.620 55.000 22.36 2.60 44.11 2.67
25 26 2.681064 GCTGGGCCAAGGCAATCA 60.681 61.111 9.87 7.08 44.11 2.57
26 27 2.718073 GCTGGGCCAAGGCAATCAG 61.718 63.158 9.87 16.35 44.11 2.90
27 28 1.000521 CTGGGCCAAGGCAATCAGA 60.001 57.895 8.04 0.00 44.11 3.27
28 29 0.612732 CTGGGCCAAGGCAATCAGAA 60.613 55.000 8.04 0.00 44.11 3.02
29 30 0.612732 TGGGCCAAGGCAATCAGAAG 60.613 55.000 13.87 0.00 44.11 2.85
30 31 1.514553 GGCCAAGGCAATCAGAAGC 59.485 57.895 13.87 0.00 44.11 3.86
31 32 1.138247 GCCAAGGCAATCAGAAGCG 59.862 57.895 6.14 0.00 41.49 4.68
32 33 1.805254 CCAAGGCAATCAGAAGCGG 59.195 57.895 0.00 0.00 0.00 5.52
33 34 0.677731 CCAAGGCAATCAGAAGCGGA 60.678 55.000 0.00 0.00 0.00 5.54
34 35 0.449388 CAAGGCAATCAGAAGCGGAC 59.551 55.000 0.00 0.00 0.00 4.79
35 36 0.678048 AAGGCAATCAGAAGCGGACC 60.678 55.000 0.00 0.00 0.00 4.46
36 37 1.078143 GGCAATCAGAAGCGGACCT 60.078 57.895 0.00 0.00 0.00 3.85
37 38 1.372087 GGCAATCAGAAGCGGACCTG 61.372 60.000 0.00 0.00 0.00 4.00
38 39 0.391661 GCAATCAGAAGCGGACCTGA 60.392 55.000 0.00 0.00 42.78 3.86
39 40 1.363744 CAATCAGAAGCGGACCTGAC 58.636 55.000 0.00 0.00 41.59 3.51
40 41 0.976641 AATCAGAAGCGGACCTGACA 59.023 50.000 0.00 0.00 41.59 3.58
41 42 0.534412 ATCAGAAGCGGACCTGACAG 59.466 55.000 0.00 0.00 41.59 3.51
42 43 1.739562 CAGAAGCGGACCTGACAGC 60.740 63.158 0.00 0.00 32.37 4.40
43 44 2.811317 GAAGCGGACCTGACAGCG 60.811 66.667 0.00 0.00 36.22 5.18
44 45 4.379243 AAGCGGACCTGACAGCGG 62.379 66.667 0.00 0.00 36.22 5.52
49 50 3.371063 GACCTGACAGCGGTCCGA 61.371 66.667 17.49 0.00 44.08 4.55
50 51 3.628280 GACCTGACAGCGGTCCGAC 62.628 68.421 17.49 6.52 44.08 4.79
51 52 3.680786 CCTGACAGCGGTCCGACA 61.681 66.667 17.49 7.99 43.65 4.35
52 53 2.430921 CTGACAGCGGTCCGACAC 60.431 66.667 17.49 3.37 43.65 3.67
53 54 3.916392 CTGACAGCGGTCCGACACC 62.916 68.421 17.49 0.00 43.65 4.16
54 55 4.736896 GACAGCGGTCCGACACCC 62.737 72.222 17.49 0.00 43.31 4.61
59 60 4.973055 CGGTCCGACACCCGCAAA 62.973 66.667 4.91 0.00 43.31 3.68
60 61 2.592287 GGTCCGACACCCGCAAAA 60.592 61.111 0.00 0.00 39.69 2.44
61 62 2.635338 GTCCGACACCCGCAAAAC 59.365 61.111 0.00 0.00 36.84 2.43
62 63 2.592287 TCCGACACCCGCAAAACC 60.592 61.111 0.00 0.00 36.84 3.27
63 64 2.593436 CCGACACCCGCAAAACCT 60.593 61.111 0.00 0.00 36.84 3.50
64 65 2.613506 CCGACACCCGCAAAACCTC 61.614 63.158 0.00 0.00 36.84 3.85
65 66 1.890041 CGACACCCGCAAAACCTCA 60.890 57.895 0.00 0.00 0.00 3.86
66 67 1.652563 GACACCCGCAAAACCTCAC 59.347 57.895 0.00 0.00 0.00 3.51
67 68 1.792118 GACACCCGCAAAACCTCACC 61.792 60.000 0.00 0.00 0.00 4.02
68 69 1.528309 CACCCGCAAAACCTCACCT 60.528 57.895 0.00 0.00 0.00 4.00
69 70 0.250553 CACCCGCAAAACCTCACCTA 60.251 55.000 0.00 0.00 0.00 3.08
70 71 0.036306 ACCCGCAAAACCTCACCTAG 59.964 55.000 0.00 0.00 0.00 3.02
71 72 0.036306 CCCGCAAAACCTCACCTAGT 59.964 55.000 0.00 0.00 0.00 2.57
72 73 1.544759 CCCGCAAAACCTCACCTAGTT 60.545 52.381 0.00 0.00 0.00 2.24
73 74 2.227194 CCGCAAAACCTCACCTAGTTT 58.773 47.619 0.00 0.00 37.80 2.66
74 75 2.031157 CCGCAAAACCTCACCTAGTTTG 60.031 50.000 0.00 0.00 36.36 2.93
75 76 2.616842 CGCAAAACCTCACCTAGTTTGT 59.383 45.455 0.00 0.00 36.36 2.83
76 77 3.303791 CGCAAAACCTCACCTAGTTTGTC 60.304 47.826 0.00 0.00 36.36 3.18
77 78 3.883489 GCAAAACCTCACCTAGTTTGTCT 59.117 43.478 0.00 0.00 36.36 3.41
78 79 4.338400 GCAAAACCTCACCTAGTTTGTCTT 59.662 41.667 0.00 0.00 36.36 3.01
79 80 5.163550 GCAAAACCTCACCTAGTTTGTCTTT 60.164 40.000 0.00 0.00 36.36 2.52
80 81 6.265577 CAAAACCTCACCTAGTTTGTCTTTG 58.734 40.000 0.00 0.00 36.36 2.77
81 82 4.086706 ACCTCACCTAGTTTGTCTTTGG 57.913 45.455 0.00 0.00 0.00 3.28
82 83 3.458487 ACCTCACCTAGTTTGTCTTTGGT 59.542 43.478 0.00 0.00 34.07 3.67
83 84 4.079958 ACCTCACCTAGTTTGTCTTTGGTT 60.080 41.667 0.00 0.00 32.43 3.67
84 85 4.887655 CCTCACCTAGTTTGTCTTTGGTTT 59.112 41.667 0.00 0.00 32.43 3.27
85 86 5.221048 CCTCACCTAGTTTGTCTTTGGTTTG 60.221 44.000 0.00 0.00 32.43 2.93
86 87 5.258051 TCACCTAGTTTGTCTTTGGTTTGT 58.742 37.500 0.00 0.00 32.43 2.83
87 88 5.124776 TCACCTAGTTTGTCTTTGGTTTGTG 59.875 40.000 0.00 0.00 32.43 3.33
88 89 4.401202 ACCTAGTTTGTCTTTGGTTTGTGG 59.599 41.667 0.00 0.00 31.32 4.17
89 90 3.885724 AGTTTGTCTTTGGTTTGTGGG 57.114 42.857 0.00 0.00 0.00 4.61
90 91 3.436243 AGTTTGTCTTTGGTTTGTGGGA 58.564 40.909 0.00 0.00 0.00 4.37
91 92 3.835395 AGTTTGTCTTTGGTTTGTGGGAA 59.165 39.130 0.00 0.00 0.00 3.97
92 93 4.284746 AGTTTGTCTTTGGTTTGTGGGAAA 59.715 37.500 0.00 0.00 0.00 3.13
93 94 4.891992 TTGTCTTTGGTTTGTGGGAAAA 57.108 36.364 0.00 0.00 0.00 2.29
94 95 4.464069 TGTCTTTGGTTTGTGGGAAAAG 57.536 40.909 0.00 0.00 0.00 2.27
95 96 4.090090 TGTCTTTGGTTTGTGGGAAAAGA 58.910 39.130 0.00 0.00 35.17 2.52
96 97 4.714308 TGTCTTTGGTTTGTGGGAAAAGAT 59.286 37.500 0.00 0.00 38.66 2.40
97 98 5.049828 GTCTTTGGTTTGTGGGAAAAGATG 58.950 41.667 0.00 0.00 38.66 2.90
98 99 3.467374 TTGGTTTGTGGGAAAAGATGC 57.533 42.857 0.00 0.00 0.00 3.91
99 100 1.339610 TGGTTTGTGGGAAAAGATGCG 59.660 47.619 0.00 0.00 0.00 4.73
100 101 1.418373 GTTTGTGGGAAAAGATGCGC 58.582 50.000 0.00 0.00 0.00 6.09
101 102 1.000274 GTTTGTGGGAAAAGATGCGCT 60.000 47.619 9.73 0.00 0.00 5.92
102 103 0.881118 TTGTGGGAAAAGATGCGCTC 59.119 50.000 9.73 3.60 0.00 5.03
103 104 1.298157 TGTGGGAAAAGATGCGCTCG 61.298 55.000 9.73 0.00 0.00 5.03
104 105 1.745115 TGGGAAAAGATGCGCTCGG 60.745 57.895 9.73 0.00 0.00 4.63
105 106 1.449601 GGGAAAAGATGCGCTCGGA 60.450 57.895 9.73 0.00 0.00 4.55
106 107 1.706287 GGGAAAAGATGCGCTCGGAC 61.706 60.000 9.73 0.00 0.00 4.79
107 108 0.741221 GGAAAAGATGCGCTCGGACT 60.741 55.000 9.73 0.00 0.00 3.85
108 109 0.371645 GAAAAGATGCGCTCGGACTG 59.628 55.000 9.73 0.00 0.00 3.51
109 110 0.320771 AAAAGATGCGCTCGGACTGT 60.321 50.000 9.73 0.00 0.00 3.55
110 111 0.320771 AAAGATGCGCTCGGACTGTT 60.321 50.000 9.73 0.00 0.00 3.16
111 112 1.016130 AAGATGCGCTCGGACTGTTG 61.016 55.000 9.73 0.00 0.00 3.33
112 113 1.446099 GATGCGCTCGGACTGTTGA 60.446 57.895 9.73 0.00 0.00 3.18
113 114 1.416813 GATGCGCTCGGACTGTTGAG 61.417 60.000 9.73 6.63 35.30 3.02
116 117 2.811317 GCTCGGACTGTTGAGCGG 60.811 66.667 16.62 0.00 47.00 5.52
117 118 2.962569 CTCGGACTGTTGAGCGGA 59.037 61.111 0.00 0.00 0.00 5.54
118 119 1.513158 CTCGGACTGTTGAGCGGAT 59.487 57.895 0.00 0.00 0.00 4.18
119 120 0.526524 CTCGGACTGTTGAGCGGATC 60.527 60.000 0.00 0.00 0.00 3.36
120 121 1.874019 CGGACTGTTGAGCGGATCG 60.874 63.158 0.00 0.00 0.00 3.69
121 122 1.511305 GGACTGTTGAGCGGATCGA 59.489 57.895 0.00 0.00 0.00 3.59
122 123 0.103208 GGACTGTTGAGCGGATCGAT 59.897 55.000 0.00 0.00 0.00 3.59
123 124 1.337071 GGACTGTTGAGCGGATCGATA 59.663 52.381 0.00 0.00 0.00 2.92
124 125 2.386249 GACTGTTGAGCGGATCGATAC 58.614 52.381 0.00 0.00 0.00 2.24
125 126 1.749063 ACTGTTGAGCGGATCGATACA 59.251 47.619 8.69 1.55 0.00 2.29
126 127 2.165641 ACTGTTGAGCGGATCGATACAA 59.834 45.455 8.69 3.34 0.00 2.41
127 128 2.791560 CTGTTGAGCGGATCGATACAAG 59.208 50.000 8.69 0.00 0.00 3.16
128 129 2.425668 TGTTGAGCGGATCGATACAAGA 59.574 45.455 8.69 2.19 0.00 3.02
129 130 2.776312 TGAGCGGATCGATACAAGAC 57.224 50.000 8.69 0.00 0.00 3.01
130 131 1.337071 TGAGCGGATCGATACAAGACC 59.663 52.381 8.69 0.00 0.00 3.85
131 132 0.311165 AGCGGATCGATACAAGACCG 59.689 55.000 14.67 14.67 42.63 4.79
132 133 2.797515 CGGATCGATACAAGACCGC 58.202 57.895 8.69 0.00 34.36 5.68
133 134 0.997226 CGGATCGATACAAGACCGCG 60.997 60.000 8.69 0.00 34.36 6.46
134 135 0.030369 GGATCGATACAAGACCGCGT 59.970 55.000 4.92 0.00 0.00 6.01
135 136 1.535437 GGATCGATACAAGACCGCGTT 60.535 52.381 4.92 0.00 0.00 4.84
136 137 1.517276 GATCGATACAAGACCGCGTTG 59.483 52.381 4.92 5.81 0.00 4.10
137 138 0.457166 TCGATACAAGACCGCGTTGG 60.457 55.000 4.92 0.00 46.41 3.77
138 139 0.457166 CGATACAAGACCGCGTTGGA 60.457 55.000 4.92 0.00 42.00 3.53
139 140 1.801395 CGATACAAGACCGCGTTGGAT 60.801 52.381 4.92 5.21 42.00 3.41
140 141 1.593006 GATACAAGACCGCGTTGGATG 59.407 52.381 10.10 2.91 42.00 3.51
141 142 0.390603 TACAAGACCGCGTTGGATGG 60.391 55.000 4.92 0.00 42.00 3.51
142 143 2.746277 AAGACCGCGTTGGATGGC 60.746 61.111 4.92 0.00 42.00 4.40
143 144 3.545124 AAGACCGCGTTGGATGGCA 62.545 57.895 4.92 0.00 42.00 4.92
144 145 2.819984 AAGACCGCGTTGGATGGCAT 62.820 55.000 4.92 0.00 42.00 4.40
145 146 1.522806 GACCGCGTTGGATGGCATA 60.523 57.895 4.92 0.00 42.00 3.14
146 147 1.078072 ACCGCGTTGGATGGCATAA 60.078 52.632 4.92 0.00 42.00 1.90
147 148 1.355210 CCGCGTTGGATGGCATAAC 59.645 57.895 4.92 1.01 42.00 1.89
148 149 1.372838 CCGCGTTGGATGGCATAACA 61.373 55.000 4.92 7.02 42.00 2.41
149 150 0.248054 CGCGTTGGATGGCATAACAC 60.248 55.000 12.30 3.25 0.00 3.32
150 151 0.248054 GCGTTGGATGGCATAACACG 60.248 55.000 16.37 16.37 0.00 4.49
151 152 1.083489 CGTTGGATGGCATAACACGT 58.917 50.000 12.30 0.00 0.00 4.49
152 153 1.466950 CGTTGGATGGCATAACACGTT 59.533 47.619 12.30 0.00 0.00 3.99
153 154 2.475519 CGTTGGATGGCATAACACGTTC 60.476 50.000 12.30 0.00 0.00 3.95
154 155 1.364721 TGGATGGCATAACACGTTCG 58.635 50.000 0.00 0.00 0.00 3.95
155 156 0.655733 GGATGGCATAACACGTTCGG 59.344 55.000 0.00 0.00 0.00 4.30
156 157 1.647346 GATGGCATAACACGTTCGGA 58.353 50.000 0.00 0.00 0.00 4.55
157 158 1.326548 GATGGCATAACACGTTCGGAC 59.673 52.381 0.00 0.00 0.00 4.79
158 159 0.671163 TGGCATAACACGTTCGGACC 60.671 55.000 0.00 0.00 0.00 4.46
159 160 1.689352 GGCATAACACGTTCGGACCG 61.689 60.000 7.84 7.84 0.00 4.79
160 161 1.705727 CATAACACGTTCGGACCGC 59.294 57.895 9.66 0.00 0.00 5.68
161 162 1.802715 ATAACACGTTCGGACCGCG 60.803 57.895 9.66 10.84 0.00 6.46
162 163 2.476534 ATAACACGTTCGGACCGCGT 62.477 55.000 9.66 11.57 39.59 6.01
174 175 2.590575 CCGCGTGGTCCAAACAGT 60.591 61.111 6.91 0.00 0.00 3.55
175 176 2.184167 CCGCGTGGTCCAAACAGTT 61.184 57.895 6.91 0.00 0.00 3.16
176 177 0.881159 CCGCGTGGTCCAAACAGTTA 60.881 55.000 6.91 0.00 0.00 2.24
177 178 0.233848 CGCGTGGTCCAAACAGTTAC 59.766 55.000 0.00 0.00 0.00 2.50
178 179 0.233848 GCGTGGTCCAAACAGTTACG 59.766 55.000 0.00 0.51 0.00 3.18
179 180 0.863144 CGTGGTCCAAACAGTTACGG 59.137 55.000 0.00 0.00 0.00 4.02
180 181 1.232119 GTGGTCCAAACAGTTACGGG 58.768 55.000 0.00 0.00 0.00 5.28
181 182 0.838608 TGGTCCAAACAGTTACGGGT 59.161 50.000 0.00 0.00 0.00 5.28
182 183 1.232119 GGTCCAAACAGTTACGGGTG 58.768 55.000 2.53 0.00 0.00 4.61
183 184 1.232119 GTCCAAACAGTTACGGGTGG 58.768 55.000 2.53 2.15 0.00 4.61
184 185 0.838608 TCCAAACAGTTACGGGTGGT 59.161 50.000 7.18 0.00 0.00 4.16
185 186 1.212441 TCCAAACAGTTACGGGTGGTT 59.788 47.619 7.18 0.00 0.00 3.67
186 187 2.025898 CCAAACAGTTACGGGTGGTTT 58.974 47.619 0.00 0.00 32.33 3.27
187 188 2.223618 CCAAACAGTTACGGGTGGTTTG 60.224 50.000 0.00 0.00 44.71 2.93
188 189 2.423446 AACAGTTACGGGTGGTTTGT 57.577 45.000 0.00 0.00 0.00 2.83
189 190 1.670791 ACAGTTACGGGTGGTTTGTG 58.329 50.000 0.00 0.00 0.00 3.33
190 191 0.948678 CAGTTACGGGTGGTTTGTGG 59.051 55.000 0.00 0.00 0.00 4.17
191 192 0.179012 AGTTACGGGTGGTTTGTGGG 60.179 55.000 0.00 0.00 0.00 4.61
192 193 0.466007 GTTACGGGTGGTTTGTGGGT 60.466 55.000 0.00 0.00 0.00 4.51
193 194 0.179023 TTACGGGTGGTTTGTGGGTC 60.179 55.000 0.00 0.00 0.00 4.46
194 195 2.380433 TACGGGTGGTTTGTGGGTCG 62.380 60.000 0.00 0.00 0.00 4.79
195 196 2.596338 GGGTGGTTTGTGGGTCGG 60.596 66.667 0.00 0.00 0.00 4.79
196 197 3.292159 GGTGGTTTGTGGGTCGGC 61.292 66.667 0.00 0.00 0.00 5.54
197 198 3.656045 GTGGTTTGTGGGTCGGCG 61.656 66.667 0.00 0.00 0.00 6.46
198 199 4.178169 TGGTTTGTGGGTCGGCGT 62.178 61.111 6.85 0.00 0.00 5.68
199 200 2.903350 GGTTTGTGGGTCGGCGTT 60.903 61.111 6.85 0.00 0.00 4.84
200 201 2.330041 GTTTGTGGGTCGGCGTTG 59.670 61.111 6.85 0.00 0.00 4.10
201 202 2.902846 TTTGTGGGTCGGCGTTGG 60.903 61.111 6.85 0.00 0.00 3.77
202 203 3.402095 TTTGTGGGTCGGCGTTGGA 62.402 57.895 6.85 0.00 0.00 3.53
203 204 3.818121 TTGTGGGTCGGCGTTGGAG 62.818 63.158 6.85 0.00 0.00 3.86
204 205 3.998672 GTGGGTCGGCGTTGGAGA 61.999 66.667 6.85 0.00 0.00 3.71
205 206 3.000819 TGGGTCGGCGTTGGAGAT 61.001 61.111 6.85 0.00 0.00 2.75
206 207 2.511600 GGGTCGGCGTTGGAGATG 60.512 66.667 6.85 0.00 0.00 2.90
207 208 3.195698 GGTCGGCGTTGGAGATGC 61.196 66.667 6.85 0.00 39.65 3.91
220 221 4.712051 TGGAGATGCCAGCTTGTATATT 57.288 40.909 0.00 0.00 43.33 1.28
221 222 4.645535 TGGAGATGCCAGCTTGTATATTC 58.354 43.478 0.00 0.00 43.33 1.75
222 223 4.102996 TGGAGATGCCAGCTTGTATATTCA 59.897 41.667 0.00 0.00 43.33 2.57
223 224 5.221986 TGGAGATGCCAGCTTGTATATTCAT 60.222 40.000 0.00 0.00 43.33 2.57
224 225 5.709164 GGAGATGCCAGCTTGTATATTCATT 59.291 40.000 0.00 0.00 36.34 2.57
225 226 6.208204 GGAGATGCCAGCTTGTATATTCATTT 59.792 38.462 0.00 0.00 36.34 2.32
226 227 7.255730 GGAGATGCCAGCTTGTATATTCATTTT 60.256 37.037 0.00 0.00 36.34 1.82
227 228 8.015185 AGATGCCAGCTTGTATATTCATTTTT 57.985 30.769 0.00 0.00 0.00 1.94
273 274 7.801716 TGATTGTCAAAGCTTTAGTACAACT 57.198 32.000 24.59 17.53 30.40 3.16
274 275 8.220755 TGATTGTCAAAGCTTTAGTACAACTT 57.779 30.769 24.59 15.88 30.40 2.66
275 276 8.682710 TGATTGTCAAAGCTTTAGTACAACTTT 58.317 29.630 24.59 15.39 30.40 2.66
278 279 8.951787 TGTCAAAGCTTTAGTACAACTTTAGA 57.048 30.769 12.25 0.00 0.00 2.10
279 280 9.386010 TGTCAAAGCTTTAGTACAACTTTAGAA 57.614 29.630 12.25 0.00 0.00 2.10
280 281 9.865484 GTCAAAGCTTTAGTACAACTTTAGAAG 57.135 33.333 12.25 0.00 0.00 2.85
281 282 9.052759 TCAAAGCTTTAGTACAACTTTAGAAGG 57.947 33.333 12.25 0.00 0.00 3.46
282 283 7.981102 AAGCTTTAGTACAACTTTAGAAGGG 57.019 36.000 0.00 0.00 0.00 3.95
300 301 5.644206 AGAAGGGAGTATTTTCTTTCTTCGC 59.356 40.000 0.00 0.00 34.86 4.70
330 333 1.466950 TGGCCTTTTTATCGCACTTCG 59.533 47.619 3.32 0.00 40.15 3.79
341 344 3.358707 TCGCACTTCGAACTTCTACAA 57.641 42.857 0.00 0.00 45.36 2.41
342 345 3.909430 TCGCACTTCGAACTTCTACAAT 58.091 40.909 0.00 0.00 45.36 2.71
343 346 3.918591 TCGCACTTCGAACTTCTACAATC 59.081 43.478 0.00 0.00 45.36 2.67
351 354 9.057089 ACTTCGAACTTCTACAATCTTTTCAAT 57.943 29.630 0.00 0.00 0.00 2.57
378 381 9.947433 AAATGAAGAATTTTATTGGCTGAATGA 57.053 25.926 0.00 0.00 34.72 2.57
380 383 8.936070 TGAAGAATTTTATTGGCTGAATGATG 57.064 30.769 0.00 0.00 0.00 3.07
383 396 7.506114 AGAATTTTATTGGCTGAATGATGCAT 58.494 30.769 0.00 0.00 0.00 3.96
389 402 2.689471 TGGCTGAATGATGCATACAACC 59.311 45.455 0.00 3.88 0.00 3.77
390 403 2.954318 GGCTGAATGATGCATACAACCT 59.046 45.455 0.00 0.00 0.00 3.50
397 410 3.872696 TGATGCATACAACCTACACCAG 58.127 45.455 0.00 0.00 0.00 4.00
402 415 3.407698 CATACAACCTACACCAGCACAA 58.592 45.455 0.00 0.00 0.00 3.33
404 417 2.021457 ACAACCTACACCAGCACAAAC 58.979 47.619 0.00 0.00 0.00 2.93
410 423 3.862845 CCTACACCAGCACAAACAAAAAC 59.137 43.478 0.00 0.00 0.00 2.43
411 424 2.333014 ACACCAGCACAAACAAAAACG 58.667 42.857 0.00 0.00 0.00 3.60
412 425 2.288518 ACACCAGCACAAACAAAAACGT 60.289 40.909 0.00 0.00 0.00 3.99
414 427 2.734079 ACCAGCACAAACAAAAACGTTG 59.266 40.909 0.00 0.00 0.00 4.10
415 428 2.093467 CCAGCACAAACAAAAACGTTGG 59.907 45.455 0.00 0.00 0.00 3.77
417 430 2.028930 AGCACAAACAAAAACGTTGGGA 60.029 40.909 0.00 0.00 0.00 4.37
418 431 2.347150 GCACAAACAAAAACGTTGGGAG 59.653 45.455 0.00 0.00 0.00 4.30
445 459 9.622004 CTAGCAAAGCCATATAAGATCAAAATG 57.378 33.333 0.00 0.00 0.00 2.32
448 462 8.922676 GCAAAGCCATATAAGATCAAAATGATG 58.077 33.333 0.00 0.00 37.20 3.07
450 464 6.849502 AGCCATATAAGATCAAAATGATGCG 58.150 36.000 0.00 0.00 37.20 4.73
452 466 7.607607 AGCCATATAAGATCAAAATGATGCGTA 59.392 33.333 0.00 0.00 37.20 4.42
453 467 7.907045 GCCATATAAGATCAAAATGATGCGTAG 59.093 37.037 0.00 0.00 37.20 3.51
454 468 8.393366 CCATATAAGATCAAAATGATGCGTAGG 58.607 37.037 0.00 0.00 37.20 3.18
455 469 4.558538 AAGATCAAAATGATGCGTAGGC 57.441 40.909 0.00 0.00 37.20 3.93
504 525 6.007076 TGGATCTGTTATTGCCAAACTGTAA 58.993 36.000 0.00 0.00 0.00 2.41
505 526 6.072175 TGGATCTGTTATTGCCAAACTGTAAC 60.072 38.462 0.00 0.00 0.00 2.50
517 538 9.800433 TTGCCAAACTGTAACAATAATCATATG 57.200 29.630 0.00 0.00 0.00 1.78
519 540 7.920151 GCCAAACTGTAACAATAATCATATGCA 59.080 33.333 0.00 0.00 0.00 3.96
522 543 9.787532 AAACTGTAACAATAATCATATGCACAC 57.212 29.630 0.00 0.00 0.00 3.82
526 547 8.911965 TGTAACAATAATCATATGCACACCAAT 58.088 29.630 0.00 0.00 0.00 3.16
539 560 3.311871 GCACACCAATCATCTCATGACTC 59.688 47.826 0.00 0.00 43.01 3.36
542 565 3.875727 CACCAATCATCTCATGACTCCAC 59.124 47.826 0.00 0.00 43.01 4.02
544 567 3.129109 CAATCATCTCATGACTCCACGG 58.871 50.000 0.00 0.00 43.01 4.94
546 569 1.751351 TCATCTCATGACTCCACGGAC 59.249 52.381 0.00 0.00 33.59 4.79
548 571 0.322187 TCTCATGACTCCACGGACGA 60.322 55.000 0.00 0.00 0.00 4.20
550 573 0.891904 TCATGACTCCACGGACGACA 60.892 55.000 0.00 0.00 0.00 4.35
554 577 0.031721 GACTCCACGGACGACAAAGT 59.968 55.000 0.00 0.00 0.00 2.66
556 579 1.137513 CTCCACGGACGACAAAGTTC 58.862 55.000 0.00 0.00 0.00 3.01
561 584 2.218759 CACGGACGACAAAGTTCTTCAG 59.781 50.000 0.00 0.00 0.00 3.02
562 585 1.792949 CGGACGACAAAGTTCTTCAGG 59.207 52.381 0.00 0.00 0.00 3.86
572 595 0.402121 GTTCTTCAGGAGCAACCCCT 59.598 55.000 0.00 0.00 40.05 4.79
574 597 1.149101 TCTTCAGGAGCAACCCCTTT 58.851 50.000 0.00 0.00 40.05 3.11
576 599 2.305927 TCTTCAGGAGCAACCCCTTTAG 59.694 50.000 0.00 0.00 40.05 1.85
577 600 0.991920 TCAGGAGCAACCCCTTTAGG 59.008 55.000 0.00 0.00 40.05 2.69
596 619 7.448748 TTTAGGAAGGAATCAAAGCTAACAC 57.551 36.000 0.00 0.00 0.00 3.32
610 633 0.249699 TAACACAGCCACAGTCACCG 60.250 55.000 0.00 0.00 0.00 4.94
611 634 2.666190 CACAGCCACAGTCACCGG 60.666 66.667 0.00 0.00 0.00 5.28
612 635 2.842462 ACAGCCACAGTCACCGGA 60.842 61.111 9.46 0.00 0.00 5.14
613 636 2.217038 ACAGCCACAGTCACCGGAT 61.217 57.895 9.46 0.00 0.00 4.18
614 637 1.448540 CAGCCACAGTCACCGGATC 60.449 63.158 9.46 0.00 0.00 3.36
615 638 2.125106 GCCACAGTCACCGGATCC 60.125 66.667 9.46 0.00 0.00 3.36
618 641 0.673644 CCACAGTCACCGGATCCAAC 60.674 60.000 9.46 4.06 0.00 3.77
619 642 0.673644 CACAGTCACCGGATCCAACC 60.674 60.000 9.46 0.00 0.00 3.77
621 644 0.253044 CAGTCACCGGATCCAACCAT 59.747 55.000 9.46 0.00 0.00 3.55
622 645 0.541863 AGTCACCGGATCCAACCATC 59.458 55.000 9.46 0.00 0.00 3.51
623 646 0.251916 GTCACCGGATCCAACCATCA 59.748 55.000 9.46 0.00 0.00 3.07
624 647 0.988063 TCACCGGATCCAACCATCAA 59.012 50.000 9.46 0.00 0.00 2.57
626 649 0.255890 ACCGGATCCAACCATCAAGG 59.744 55.000 9.46 3.69 45.67 3.61
639 662 3.312890 CCATCAAGGTCAGGATCTAGGT 58.687 50.000 0.00 0.00 0.00 3.08
640 663 3.713764 CCATCAAGGTCAGGATCTAGGTT 59.286 47.826 0.00 0.00 0.00 3.50
642 665 5.339530 CCATCAAGGTCAGGATCTAGGTTTT 60.340 44.000 0.00 0.00 0.00 2.43
644 667 4.844085 TCAAGGTCAGGATCTAGGTTTTCA 59.156 41.667 0.00 0.00 0.00 2.69
646 669 5.622346 AGGTCAGGATCTAGGTTTTCATC 57.378 43.478 0.00 0.00 0.00 2.92
648 671 4.410555 GGTCAGGATCTAGGTTTTCATCCT 59.589 45.833 3.16 3.16 45.14 3.24
651 674 5.622346 AGGATCTAGGTTTTCATCCTGAC 57.378 43.478 7.44 0.00 43.04 3.51
656 1539 1.279271 AGGTTTTCATCCTGACGAGGG 59.721 52.381 0.00 0.00 40.25 4.30
665 1548 2.043852 TGACGAGGGAGGAGGAGC 60.044 66.667 0.00 0.00 0.00 4.70
670 1553 1.306568 GAGGGAGGAGGAGCAGGTT 60.307 63.158 0.00 0.00 0.00 3.50
674 1557 1.599576 GAGGAGGAGCAGGTTGGAC 59.400 63.158 0.00 0.00 0.00 4.02
675 1558 1.904990 GAGGAGGAGCAGGTTGGACC 61.905 65.000 0.00 0.00 38.99 4.46
677 1560 3.959991 GAGGAGCAGGTTGGACCGC 62.960 68.421 6.03 6.03 44.90 5.68
694 1608 2.818274 CCCGTTCGCCAAGGCTAC 60.818 66.667 9.73 6.36 39.32 3.58
697 1611 2.740826 GTTCGCCAAGGCTACGCA 60.741 61.111 9.73 0.00 39.32 5.24
699 1613 1.376683 TTCGCCAAGGCTACGCAAT 60.377 52.632 9.73 0.00 39.32 3.56
700 1614 0.108089 TTCGCCAAGGCTACGCAATA 60.108 50.000 9.73 0.00 39.32 1.90
714 1628 1.455383 GCAATATGGGGGCGAAGGTG 61.455 60.000 0.00 0.00 0.00 4.00
715 1629 0.106719 CAATATGGGGGCGAAGGTGT 60.107 55.000 0.00 0.00 0.00 4.16
716 1630 0.629058 AATATGGGGGCGAAGGTGTT 59.371 50.000 0.00 0.00 0.00 3.32
719 1633 0.898326 ATGGGGGCGAAGGTGTTTTC 60.898 55.000 0.00 0.00 0.00 2.29
720 1634 2.273179 GGGGGCGAAGGTGTTTTCC 61.273 63.158 0.00 0.00 0.00 3.13
721 1635 2.273179 GGGGCGAAGGTGTTTTCCC 61.273 63.158 0.00 0.00 33.49 3.97
722 1636 1.228459 GGGCGAAGGTGTTTTCCCT 60.228 57.895 0.00 0.00 32.29 4.20
723 1637 0.037160 GGGCGAAGGTGTTTTCCCTA 59.963 55.000 0.00 0.00 32.29 3.53
724 1638 1.340697 GGGCGAAGGTGTTTTCCCTAT 60.341 52.381 0.00 0.00 32.29 2.57
725 1639 2.092807 GGGCGAAGGTGTTTTCCCTATA 60.093 50.000 0.00 0.00 32.29 1.31
727 1641 2.606272 GCGAAGGTGTTTTCCCTATACG 59.394 50.000 0.00 0.00 0.00 3.06
728 1642 3.853475 CGAAGGTGTTTTCCCTATACGT 58.147 45.455 0.00 0.00 0.00 3.57
729 1643 4.248058 CGAAGGTGTTTTCCCTATACGTT 58.752 43.478 0.00 0.00 0.00 3.99
730 1644 4.328169 CGAAGGTGTTTTCCCTATACGTTC 59.672 45.833 0.00 0.00 34.57 3.95
731 1645 3.853475 AGGTGTTTTCCCTATACGTTCG 58.147 45.455 0.00 0.00 0.00 3.95
732 1646 2.349580 GGTGTTTTCCCTATACGTTCGC 59.650 50.000 0.00 0.00 0.00 4.70
733 1647 3.256558 GTGTTTTCCCTATACGTTCGCT 58.743 45.455 0.00 0.00 0.00 4.93
734 1648 4.423732 GTGTTTTCCCTATACGTTCGCTA 58.576 43.478 0.00 0.00 0.00 4.26
735 1649 5.045872 GTGTTTTCCCTATACGTTCGCTAT 58.954 41.667 0.00 0.00 0.00 2.97
736 1650 5.521372 GTGTTTTCCCTATACGTTCGCTATT 59.479 40.000 0.00 0.00 0.00 1.73
737 1651 6.036408 GTGTTTTCCCTATACGTTCGCTATTT 59.964 38.462 0.00 0.00 0.00 1.40
738 1652 6.594937 TGTTTTCCCTATACGTTCGCTATTTT 59.405 34.615 0.00 0.00 0.00 1.82
739 1653 6.592798 TTTCCCTATACGTTCGCTATTTTG 57.407 37.500 0.00 0.00 0.00 2.44
740 1654 5.518848 TCCCTATACGTTCGCTATTTTGA 57.481 39.130 0.00 0.00 0.00 2.69
742 1656 6.339730 TCCCTATACGTTCGCTATTTTGAAA 58.660 36.000 0.00 0.00 0.00 2.69
743 1657 6.477688 TCCCTATACGTTCGCTATTTTGAAAG 59.522 38.462 0.00 0.00 0.00 2.62
775 1876 8.734386 GCTATTGAGAAGAAATTTTGGAAGAGA 58.266 33.333 0.00 0.00 0.00 3.10
827 1928 6.837048 ACAAAACTTCCAACAACCCTATAGTT 59.163 34.615 0.00 0.00 0.00 2.24
862 1963 6.204301 CAGAGTTCAGACACAATCAGACAAAT 59.796 38.462 0.00 0.00 0.00 2.32
899 2003 1.873698 TAGCACGTTGTCCTTTCACC 58.126 50.000 0.00 0.00 0.00 4.02
900 2004 0.818040 AGCACGTTGTCCTTTCACCC 60.818 55.000 0.00 0.00 0.00 4.61
901 2005 1.792118 GCACGTTGTCCTTTCACCCC 61.792 60.000 0.00 0.00 0.00 4.95
994 2099 1.972872 AATAGGCCAAGCGATTCCAG 58.027 50.000 5.01 0.00 0.00 3.86
1003 2108 0.889994 AGCGATTCCAGCATGCAAAA 59.110 45.000 21.98 11.05 37.01 2.44
1027 2135 7.833285 ACAAAACAACCTACAATAATCACCT 57.167 32.000 0.00 0.00 0.00 4.00
1173 2281 4.153655 GTCCCTTCGTCCAAAATCTTGTAC 59.846 45.833 0.00 0.00 0.00 2.90
1174 2282 4.041198 TCCCTTCGTCCAAAATCTTGTACT 59.959 41.667 0.00 0.00 0.00 2.73
1175 2283 4.392138 CCCTTCGTCCAAAATCTTGTACTC 59.608 45.833 0.00 0.00 0.00 2.59
1814 2922 2.747855 CTCCGGCTGGCCAACTTC 60.748 66.667 7.01 0.00 35.37 3.01
1887 2995 2.052690 ACGTCACCTCCATCTCCGG 61.053 63.158 0.00 0.00 0.00 5.14
2578 3686 5.893897 AGCTCAGAAAGGATCAAAATGAC 57.106 39.130 0.00 0.00 0.00 3.06
2579 3687 5.319453 AGCTCAGAAAGGATCAAAATGACA 58.681 37.500 0.00 0.00 0.00 3.58
2580 3688 5.950549 AGCTCAGAAAGGATCAAAATGACAT 59.049 36.000 0.00 0.00 0.00 3.06
2581 3689 6.095160 AGCTCAGAAAGGATCAAAATGACATC 59.905 38.462 0.00 0.00 0.00 3.06
2582 3690 6.426980 TCAGAAAGGATCAAAATGACATCG 57.573 37.500 0.00 0.00 0.00 3.84
2583 3691 6.172630 TCAGAAAGGATCAAAATGACATCGA 58.827 36.000 0.00 0.00 0.00 3.59
2590 3698 4.582441 TCAAAATGACATCGACATGACG 57.418 40.909 11.41 11.41 33.72 4.35
2609 3717 4.916099 ACGCATAAACCGTCTTCTTTAC 57.084 40.909 0.00 0.00 32.83 2.01
2618 3726 4.566987 ACCGTCTTCTTTACTGTTCATCC 58.433 43.478 0.00 0.00 0.00 3.51
2623 3732 4.943705 TCTTCTTTACTGTTCATCCATGGC 59.056 41.667 6.96 0.00 0.00 4.40
2645 3754 1.071071 ACGGTGGAAGAACGGATCAAA 59.929 47.619 0.00 0.00 0.00 2.69
2655 3764 7.148086 TGGAAGAACGGATCAAAATTCAATAGG 60.148 37.037 0.00 0.00 0.00 2.57
2660 3769 7.559590 ACGGATCAAAATTCAATAGGAGAAG 57.440 36.000 0.00 0.00 0.00 2.85
2749 3860 0.471191 TGCTCATGCATAGGGGTGAG 59.529 55.000 0.00 3.32 45.31 3.51
2750 3861 0.761187 GCTCATGCATAGGGGTGAGA 59.239 55.000 15.26 0.00 40.30 3.27
2751 3862 1.350351 GCTCATGCATAGGGGTGAGAT 59.650 52.381 15.26 0.00 40.30 2.75
2752 3863 2.224719 GCTCATGCATAGGGGTGAGATT 60.225 50.000 15.26 0.00 40.30 2.40
2753 3864 3.008375 GCTCATGCATAGGGGTGAGATTA 59.992 47.826 15.26 0.00 40.30 1.75
2754 3865 4.505566 GCTCATGCATAGGGGTGAGATTAA 60.506 45.833 15.26 0.00 40.30 1.40
2755 3866 4.973168 TCATGCATAGGGGTGAGATTAAC 58.027 43.478 0.00 0.00 0.00 2.01
2756 3867 3.857157 TGCATAGGGGTGAGATTAACC 57.143 47.619 0.00 0.00 36.94 2.85
2757 3868 3.393687 TGCATAGGGGTGAGATTAACCT 58.606 45.455 0.00 0.00 37.85 3.50
2758 3869 3.785887 TGCATAGGGGTGAGATTAACCTT 59.214 43.478 0.00 0.00 37.85 3.50
2759 3870 4.137543 GCATAGGGGTGAGATTAACCTTG 58.862 47.826 0.00 0.00 37.85 3.61
2760 3871 4.141482 GCATAGGGGTGAGATTAACCTTGA 60.141 45.833 0.00 0.00 37.85 3.02
2761 3872 5.615289 CATAGGGGTGAGATTAACCTTGAG 58.385 45.833 0.00 0.00 37.85 3.02
2762 3873 3.532102 AGGGGTGAGATTAACCTTGAGT 58.468 45.455 0.00 0.00 37.85 3.41
2763 3874 3.264450 AGGGGTGAGATTAACCTTGAGTG 59.736 47.826 0.00 0.00 37.85 3.51
2764 3875 3.010420 GGGTGAGATTAACCTTGAGTGC 58.990 50.000 0.00 0.00 37.85 4.40
2765 3876 3.559171 GGGTGAGATTAACCTTGAGTGCA 60.559 47.826 0.00 0.00 37.85 4.57
2766 3877 4.265073 GGTGAGATTAACCTTGAGTGCAT 58.735 43.478 0.00 0.00 34.66 3.96
2767 3878 5.428253 GGTGAGATTAACCTTGAGTGCATA 58.572 41.667 0.00 0.00 34.66 3.14
2768 3879 5.294552 GGTGAGATTAACCTTGAGTGCATAC 59.705 44.000 0.00 0.00 34.66 2.39
2769 3880 5.005779 GTGAGATTAACCTTGAGTGCATACG 59.994 44.000 0.00 0.00 0.00 3.06
2770 3881 4.442706 AGATTAACCTTGAGTGCATACGG 58.557 43.478 0.00 0.00 0.00 4.02
2771 3882 3.965379 TTAACCTTGAGTGCATACGGA 57.035 42.857 0.00 0.00 0.00 4.69
2772 3883 4.481368 TTAACCTTGAGTGCATACGGAT 57.519 40.909 0.00 0.00 0.00 4.18
2773 3884 2.315925 ACCTTGAGTGCATACGGATG 57.684 50.000 2.22 2.22 36.02 3.51
2774 3885 1.134401 ACCTTGAGTGCATACGGATGG 60.134 52.381 10.28 0.00 33.26 3.51
2775 3886 1.138859 CCTTGAGTGCATACGGATGGA 59.861 52.381 10.28 2.92 33.26 3.41
2776 3887 2.224378 CCTTGAGTGCATACGGATGGAT 60.224 50.000 10.28 0.00 35.65 3.41
2777 3888 2.531522 TGAGTGCATACGGATGGATG 57.468 50.000 10.28 0.00 35.65 3.51
2778 3889 1.762370 TGAGTGCATACGGATGGATGT 59.238 47.619 10.28 0.00 35.65 3.06
2779 3890 2.170397 TGAGTGCATACGGATGGATGTT 59.830 45.455 10.28 0.00 35.65 2.71
2780 3891 2.545526 GAGTGCATACGGATGGATGTTG 59.454 50.000 10.28 0.00 35.65 3.33
2781 3892 1.002468 GTGCATACGGATGGATGTTGC 60.002 52.381 10.28 0.00 35.65 4.17
2782 3893 1.134128 TGCATACGGATGGATGTTGCT 60.134 47.619 10.28 0.00 33.26 3.91
2783 3894 2.103941 TGCATACGGATGGATGTTGCTA 59.896 45.455 10.28 0.00 33.26 3.49
2784 3895 2.738846 GCATACGGATGGATGTTGCTAG 59.261 50.000 10.28 0.00 33.26 3.42
2785 3896 2.526304 TACGGATGGATGTTGCTAGC 57.474 50.000 8.10 8.10 0.00 3.42
2786 3897 0.833287 ACGGATGGATGTTGCTAGCT 59.167 50.000 17.23 0.00 0.00 3.32
2787 3898 1.202580 ACGGATGGATGTTGCTAGCTC 60.203 52.381 17.23 9.73 0.00 4.09
2788 3899 1.875576 CGGATGGATGTTGCTAGCTCC 60.876 57.143 17.23 14.65 0.00 4.70
2789 3900 1.141657 GGATGGATGTTGCTAGCTCCA 59.858 52.381 21.76 21.76 41.76 3.86
2791 3902 3.008375 GGATGGATGTTGCTAGCTCCATA 59.992 47.826 27.35 12.09 46.06 2.74
2792 3903 4.324099 GGATGGATGTTGCTAGCTCCATAT 60.324 45.833 27.35 14.08 46.06 1.78
2793 3904 4.277515 TGGATGTTGCTAGCTCCATATC 57.722 45.455 17.14 12.69 32.92 1.63
2794 3905 3.647590 TGGATGTTGCTAGCTCCATATCA 59.352 43.478 17.14 14.91 32.92 2.15
2795 3906 4.287845 TGGATGTTGCTAGCTCCATATCAT 59.712 41.667 17.14 7.18 32.92 2.45
2796 3907 5.484998 TGGATGTTGCTAGCTCCATATCATA 59.515 40.000 17.14 5.58 32.92 2.15
2797 3908 6.013466 TGGATGTTGCTAGCTCCATATCATAA 60.013 38.462 17.14 0.00 32.92 1.90
2798 3909 6.881065 GGATGTTGCTAGCTCCATATCATAAA 59.119 38.462 17.23 0.00 0.00 1.40
2799 3910 7.148340 GGATGTTGCTAGCTCCATATCATAAAC 60.148 40.741 17.23 7.66 0.00 2.01
2800 3911 5.997746 TGTTGCTAGCTCCATATCATAAACC 59.002 40.000 17.23 0.00 0.00 3.27
2801 3912 5.823861 TGCTAGCTCCATATCATAAACCA 57.176 39.130 17.23 0.00 0.00 3.67
2802 3913 6.378661 TGCTAGCTCCATATCATAAACCAT 57.621 37.500 17.23 0.00 0.00 3.55
2803 3914 7.494922 TGCTAGCTCCATATCATAAACCATA 57.505 36.000 17.23 0.00 0.00 2.74
2804 3915 8.094284 TGCTAGCTCCATATCATAAACCATAT 57.906 34.615 17.23 0.00 0.00 1.78
2805 3916 9.212593 TGCTAGCTCCATATCATAAACCATATA 57.787 33.333 17.23 0.00 0.00 0.86
2880 3991 1.000843 AGGCGCCAAACCTTTTCATTC 59.999 47.619 31.54 0.00 31.87 2.67
2918 4029 5.472137 ACGTACAACATGAATTACAAAGCCT 59.528 36.000 0.00 0.00 0.00 4.58
3056 4167 5.363562 TGTGAGCAATACCATTGATCTCT 57.636 39.130 15.69 0.00 35.97 3.10
3076 4187 6.722328 TCTCTCTAGAGATGTGAAACACCTA 58.278 40.000 22.59 0.00 44.45 3.08
3112 4223 4.774726 TGAGGAGTAGCAGAAGAAATCAGT 59.225 41.667 0.00 0.00 0.00 3.41
3127 4238 9.871299 GAAGAAATCAGTCAGAACTTTTCTAAC 57.129 33.333 5.95 0.00 39.77 2.34
3170 4281 2.979814 TAATCTTTCGGCTAGCTGCA 57.020 45.000 19.27 4.98 45.15 4.41
3261 4372 4.411013 AGCTGCTAAAAGAAGGGACAAAT 58.589 39.130 0.00 0.00 0.00 2.32
3379 4491 1.673665 AGTAGCAGCAGCACCTTGC 60.674 57.895 3.17 0.00 45.49 4.01
3394 4506 1.615919 CCTTGCGGTAAACCTGGGATT 60.616 52.381 0.00 0.00 0.00 3.01
3478 4602 3.391506 AATTGTTCTTCCCTGCAAAGC 57.608 42.857 0.00 0.00 0.00 3.51
3518 4642 4.180377 TGAGGTACAGGTAGAGGTATGG 57.820 50.000 0.00 0.00 0.00 2.74
3576 4700 5.648960 TCATTTGCATCATTAGACAGAGCAA 59.351 36.000 0.00 0.00 38.56 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.329913 CCTTGGCCCAGCATTAACCC 61.330 60.000 0.00 0.00 0.00 4.11
1 2 1.960040 GCCTTGGCCCAGCATTAACC 61.960 60.000 0.00 0.00 0.00 2.85
2 3 1.257055 TGCCTTGGCCCAGCATTAAC 61.257 55.000 9.35 0.00 0.00 2.01
5 6 1.614226 ATTGCCTTGGCCCAGCATT 60.614 52.632 11.72 6.34 36.20 3.56
6 7 2.039951 ATTGCCTTGGCCCAGCAT 59.960 55.556 11.72 1.26 36.20 3.79
7 8 2.681064 GATTGCCTTGGCCCAGCA 60.681 61.111 9.35 3.30 33.97 4.41
8 9 2.681064 TGATTGCCTTGGCCCAGC 60.681 61.111 9.35 0.00 0.00 4.85
9 10 0.612732 TTCTGATTGCCTTGGCCCAG 60.613 55.000 9.35 12.84 0.00 4.45
10 11 0.612732 CTTCTGATTGCCTTGGCCCA 60.613 55.000 9.35 4.07 0.00 5.36
11 12 1.953231 GCTTCTGATTGCCTTGGCCC 61.953 60.000 9.35 0.00 0.00 5.80
12 13 1.514553 GCTTCTGATTGCCTTGGCC 59.485 57.895 9.35 0.00 0.00 5.36
13 14 1.138247 CGCTTCTGATTGCCTTGGC 59.862 57.895 4.43 4.43 0.00 4.52
14 15 0.677731 TCCGCTTCTGATTGCCTTGG 60.678 55.000 0.00 0.00 0.00 3.61
15 16 0.449388 GTCCGCTTCTGATTGCCTTG 59.551 55.000 0.00 0.00 0.00 3.61
16 17 0.678048 GGTCCGCTTCTGATTGCCTT 60.678 55.000 0.00 0.00 0.00 4.35
17 18 1.078143 GGTCCGCTTCTGATTGCCT 60.078 57.895 0.00 0.00 0.00 4.75
18 19 1.078143 AGGTCCGCTTCTGATTGCC 60.078 57.895 0.00 0.00 0.00 4.52
19 20 0.391661 TCAGGTCCGCTTCTGATTGC 60.392 55.000 0.00 0.00 35.37 3.56
20 21 1.338105 TGTCAGGTCCGCTTCTGATTG 60.338 52.381 0.00 0.00 41.36 2.67
21 22 0.976641 TGTCAGGTCCGCTTCTGATT 59.023 50.000 0.00 0.00 41.36 2.57
22 23 0.534412 CTGTCAGGTCCGCTTCTGAT 59.466 55.000 0.00 0.00 41.36 2.90
23 24 1.967535 CTGTCAGGTCCGCTTCTGA 59.032 57.895 0.00 0.00 37.65 3.27
24 25 1.739562 GCTGTCAGGTCCGCTTCTG 60.740 63.158 1.14 0.00 0.00 3.02
25 26 2.659610 GCTGTCAGGTCCGCTTCT 59.340 61.111 1.14 0.00 0.00 2.85
26 27 2.811317 CGCTGTCAGGTCCGCTTC 60.811 66.667 1.14 0.00 0.00 3.86
27 28 4.379243 CCGCTGTCAGGTCCGCTT 62.379 66.667 1.14 0.00 0.00 4.68
33 34 3.681835 GTCGGACCGCTGTCAGGT 61.682 66.667 9.66 0.00 43.65 4.00
34 35 3.680786 TGTCGGACCGCTGTCAGG 61.681 66.667 9.66 1.72 43.65 3.86
35 36 2.430921 GTGTCGGACCGCTGTCAG 60.431 66.667 9.66 6.34 43.65 3.51
36 37 3.986006 GGTGTCGGACCGCTGTCA 61.986 66.667 9.66 2.97 43.65 3.58
43 44 2.592287 TTTTGCGGGTGTCGGACC 60.592 61.111 5.55 0.00 45.28 4.46
44 45 2.635338 GTTTTGCGGGTGTCGGAC 59.365 61.111 0.00 0.00 39.39 4.79
45 46 2.592287 GGTTTTGCGGGTGTCGGA 60.592 61.111 0.00 0.00 39.69 4.55
46 47 2.593436 AGGTTTTGCGGGTGTCGG 60.593 61.111 0.00 0.00 39.69 4.79
47 48 1.890041 TGAGGTTTTGCGGGTGTCG 60.890 57.895 0.00 0.00 42.76 4.35
48 49 1.652563 GTGAGGTTTTGCGGGTGTC 59.347 57.895 0.00 0.00 0.00 3.67
49 50 1.826487 GGTGAGGTTTTGCGGGTGT 60.826 57.895 0.00 0.00 0.00 4.16
50 51 0.250553 TAGGTGAGGTTTTGCGGGTG 60.251 55.000 0.00 0.00 0.00 4.61
51 52 0.036306 CTAGGTGAGGTTTTGCGGGT 59.964 55.000 0.00 0.00 0.00 5.28
52 53 0.036306 ACTAGGTGAGGTTTTGCGGG 59.964 55.000 0.00 0.00 0.00 6.13
53 54 1.892209 AACTAGGTGAGGTTTTGCGG 58.108 50.000 0.00 0.00 0.00 5.69
54 55 2.616842 ACAAACTAGGTGAGGTTTTGCG 59.383 45.455 2.93 0.00 30.27 4.85
55 56 3.883489 AGACAAACTAGGTGAGGTTTTGC 59.117 43.478 2.93 0.00 30.27 3.68
56 57 6.265577 CAAAGACAAACTAGGTGAGGTTTTG 58.734 40.000 2.93 1.24 30.27 2.44
57 58 5.359860 CCAAAGACAAACTAGGTGAGGTTTT 59.640 40.000 2.93 0.00 30.27 2.43
58 59 4.887655 CCAAAGACAAACTAGGTGAGGTTT 59.112 41.667 2.93 0.00 30.27 3.27
59 60 4.079958 ACCAAAGACAAACTAGGTGAGGTT 60.080 41.667 2.93 0.00 36.33 3.50
60 61 3.458487 ACCAAAGACAAACTAGGTGAGGT 59.542 43.478 2.93 0.00 36.33 3.85
61 62 4.086706 ACCAAAGACAAACTAGGTGAGG 57.913 45.455 2.93 0.00 36.33 3.86
62 63 5.357032 ACAAACCAAAGACAAACTAGGTGAG 59.643 40.000 2.93 0.00 37.27 3.51
63 64 5.124776 CACAAACCAAAGACAAACTAGGTGA 59.875 40.000 2.93 0.00 37.27 4.02
64 65 5.339990 CACAAACCAAAGACAAACTAGGTG 58.660 41.667 0.00 0.00 37.27 4.00
65 66 4.401202 CCACAAACCAAAGACAAACTAGGT 59.599 41.667 0.00 0.00 38.30 3.08
66 67 4.202111 CCCACAAACCAAAGACAAACTAGG 60.202 45.833 0.00 0.00 0.00 3.02
67 68 4.642885 TCCCACAAACCAAAGACAAACTAG 59.357 41.667 0.00 0.00 0.00 2.57
68 69 4.601084 TCCCACAAACCAAAGACAAACTA 58.399 39.130 0.00 0.00 0.00 2.24
69 70 3.436243 TCCCACAAACCAAAGACAAACT 58.564 40.909 0.00 0.00 0.00 2.66
70 71 3.878160 TCCCACAAACCAAAGACAAAC 57.122 42.857 0.00 0.00 0.00 2.93
71 72 4.891992 TTTCCCACAAACCAAAGACAAA 57.108 36.364 0.00 0.00 0.00 2.83
72 73 4.528596 TCTTTTCCCACAAACCAAAGACAA 59.471 37.500 0.00 0.00 30.30 3.18
73 74 4.090090 TCTTTTCCCACAAACCAAAGACA 58.910 39.130 0.00 0.00 30.30 3.41
74 75 4.729227 TCTTTTCCCACAAACCAAAGAC 57.271 40.909 0.00 0.00 30.30 3.01
75 76 4.442753 GCATCTTTTCCCACAAACCAAAGA 60.443 41.667 0.00 0.00 37.75 2.52
76 77 3.809279 GCATCTTTTCCCACAAACCAAAG 59.191 43.478 0.00 0.00 0.00 2.77
77 78 3.739519 CGCATCTTTTCCCACAAACCAAA 60.740 43.478 0.00 0.00 0.00 3.28
78 79 2.223923 CGCATCTTTTCCCACAAACCAA 60.224 45.455 0.00 0.00 0.00 3.67
79 80 1.339610 CGCATCTTTTCCCACAAACCA 59.660 47.619 0.00 0.00 0.00 3.67
80 81 1.934849 GCGCATCTTTTCCCACAAACC 60.935 52.381 0.30 0.00 0.00 3.27
81 82 1.000274 AGCGCATCTTTTCCCACAAAC 60.000 47.619 11.47 0.00 0.00 2.93
82 83 1.269448 GAGCGCATCTTTTCCCACAAA 59.731 47.619 11.47 0.00 0.00 2.83
83 84 0.881118 GAGCGCATCTTTTCCCACAA 59.119 50.000 11.47 0.00 0.00 3.33
84 85 1.298157 CGAGCGCATCTTTTCCCACA 61.298 55.000 11.47 0.00 0.00 4.17
85 86 1.425428 CGAGCGCATCTTTTCCCAC 59.575 57.895 11.47 0.00 0.00 4.61
86 87 1.745115 CCGAGCGCATCTTTTCCCA 60.745 57.895 11.47 0.00 0.00 4.37
87 88 1.449601 TCCGAGCGCATCTTTTCCC 60.450 57.895 11.47 0.00 0.00 3.97
88 89 0.741221 AGTCCGAGCGCATCTTTTCC 60.741 55.000 11.47 0.00 0.00 3.13
89 90 0.371645 CAGTCCGAGCGCATCTTTTC 59.628 55.000 11.47 0.00 0.00 2.29
90 91 0.320771 ACAGTCCGAGCGCATCTTTT 60.321 50.000 11.47 0.00 0.00 2.27
91 92 0.320771 AACAGTCCGAGCGCATCTTT 60.321 50.000 11.47 0.00 0.00 2.52
92 93 1.016130 CAACAGTCCGAGCGCATCTT 61.016 55.000 11.47 0.00 0.00 2.40
93 94 1.446792 CAACAGTCCGAGCGCATCT 60.447 57.895 11.47 0.00 0.00 2.90
94 95 1.416813 CTCAACAGTCCGAGCGCATC 61.417 60.000 11.47 3.18 0.00 3.91
95 96 1.446792 CTCAACAGTCCGAGCGCAT 60.447 57.895 11.47 0.00 0.00 4.73
96 97 2.049156 CTCAACAGTCCGAGCGCA 60.049 61.111 11.47 0.00 0.00 6.09
97 98 3.482783 GCTCAACAGTCCGAGCGC 61.483 66.667 0.00 0.00 44.68 5.92
100 101 0.526524 GATCCGCTCAACAGTCCGAG 60.527 60.000 0.00 0.00 0.00 4.63
101 102 1.511305 GATCCGCTCAACAGTCCGA 59.489 57.895 0.00 0.00 0.00 4.55
102 103 1.874019 CGATCCGCTCAACAGTCCG 60.874 63.158 0.00 0.00 0.00 4.79
103 104 0.103208 ATCGATCCGCTCAACAGTCC 59.897 55.000 0.00 0.00 0.00 3.85
104 105 2.223502 TGTATCGATCCGCTCAACAGTC 60.224 50.000 0.00 0.00 0.00 3.51
105 106 1.749063 TGTATCGATCCGCTCAACAGT 59.251 47.619 0.00 0.00 0.00 3.55
106 107 2.492019 TGTATCGATCCGCTCAACAG 57.508 50.000 0.00 0.00 0.00 3.16
107 108 2.425668 TCTTGTATCGATCCGCTCAACA 59.574 45.455 0.00 0.00 0.00 3.33
108 109 2.789893 GTCTTGTATCGATCCGCTCAAC 59.210 50.000 0.00 0.00 0.00 3.18
109 110 2.223735 GGTCTTGTATCGATCCGCTCAA 60.224 50.000 0.00 0.90 0.00 3.02
110 111 1.337071 GGTCTTGTATCGATCCGCTCA 59.663 52.381 0.00 0.00 0.00 4.26
111 112 1.663445 CGGTCTTGTATCGATCCGCTC 60.663 57.143 0.00 0.00 0.00 5.03
112 113 0.311165 CGGTCTTGTATCGATCCGCT 59.689 55.000 0.00 0.00 0.00 5.52
113 114 2.797515 CGGTCTTGTATCGATCCGC 58.202 57.895 0.00 0.00 0.00 5.54
114 115 0.997226 CGCGGTCTTGTATCGATCCG 60.997 60.000 14.67 14.67 40.72 4.18
115 116 0.030369 ACGCGGTCTTGTATCGATCC 59.970 55.000 12.47 0.00 0.00 3.36
116 117 1.517276 CAACGCGGTCTTGTATCGATC 59.483 52.381 12.47 0.00 0.00 3.69
117 118 1.556564 CAACGCGGTCTTGTATCGAT 58.443 50.000 12.47 2.16 0.00 3.59
118 119 0.457166 CCAACGCGGTCTTGTATCGA 60.457 55.000 12.47 0.00 0.00 3.59
119 120 0.457166 TCCAACGCGGTCTTGTATCG 60.457 55.000 12.47 0.00 35.57 2.92
120 121 1.593006 CATCCAACGCGGTCTTGTATC 59.407 52.381 12.47 0.00 35.57 2.24
121 122 1.651987 CATCCAACGCGGTCTTGTAT 58.348 50.000 12.47 0.00 35.57 2.29
122 123 0.390603 CCATCCAACGCGGTCTTGTA 60.391 55.000 12.47 0.00 35.57 2.41
123 124 1.671054 CCATCCAACGCGGTCTTGT 60.671 57.895 12.47 0.00 35.57 3.16
124 125 3.039202 GCCATCCAACGCGGTCTTG 62.039 63.158 12.47 5.95 35.57 3.02
125 126 2.746277 GCCATCCAACGCGGTCTT 60.746 61.111 12.47 0.00 35.57 3.01
126 127 1.966901 TATGCCATCCAACGCGGTCT 61.967 55.000 12.47 0.00 35.57 3.85
127 128 1.092921 TTATGCCATCCAACGCGGTC 61.093 55.000 12.47 0.00 35.57 4.79
128 129 1.078072 TTATGCCATCCAACGCGGT 60.078 52.632 12.47 0.00 35.57 5.68
129 130 1.355210 GTTATGCCATCCAACGCGG 59.645 57.895 12.47 0.00 0.00 6.46
130 131 0.248054 GTGTTATGCCATCCAACGCG 60.248 55.000 3.53 3.53 0.00 6.01
131 132 0.248054 CGTGTTATGCCATCCAACGC 60.248 55.000 0.00 0.00 0.00 4.84
132 133 1.083489 ACGTGTTATGCCATCCAACG 58.917 50.000 0.00 4.90 0.00 4.10
133 134 2.475519 CGAACGTGTTATGCCATCCAAC 60.476 50.000 0.00 0.00 0.00 3.77
134 135 1.735018 CGAACGTGTTATGCCATCCAA 59.265 47.619 0.00 0.00 0.00 3.53
135 136 1.364721 CGAACGTGTTATGCCATCCA 58.635 50.000 0.00 0.00 0.00 3.41
136 137 0.655733 CCGAACGTGTTATGCCATCC 59.344 55.000 0.00 0.00 0.00 3.51
137 138 1.326548 GTCCGAACGTGTTATGCCATC 59.673 52.381 0.00 0.00 0.00 3.51
138 139 1.365699 GTCCGAACGTGTTATGCCAT 58.634 50.000 0.00 0.00 0.00 4.40
139 140 0.671163 GGTCCGAACGTGTTATGCCA 60.671 55.000 0.00 0.00 0.00 4.92
140 141 1.689352 CGGTCCGAACGTGTTATGCC 61.689 60.000 4.91 0.00 0.00 4.40
141 142 1.705727 CGGTCCGAACGTGTTATGC 59.294 57.895 4.91 0.00 0.00 3.14
142 143 1.705727 GCGGTCCGAACGTGTTATG 59.294 57.895 17.49 0.00 0.00 1.90
143 144 1.802715 CGCGGTCCGAACGTGTTAT 60.803 57.895 17.49 0.00 40.02 1.89
144 145 2.428902 CGCGGTCCGAACGTGTTA 60.429 61.111 17.49 0.00 40.02 2.41
157 158 0.881159 TAACTGTTTGGACCACGCGG 60.881 55.000 12.47 0.00 38.77 6.46
158 159 0.233848 GTAACTGTTTGGACCACGCG 59.766 55.000 3.53 3.53 0.00 6.01
159 160 0.233848 CGTAACTGTTTGGACCACGC 59.766 55.000 0.00 0.00 0.00 5.34
160 161 0.863144 CCGTAACTGTTTGGACCACG 59.137 55.000 0.00 1.19 0.00 4.94
161 162 1.232119 CCCGTAACTGTTTGGACCAC 58.768 55.000 11.70 0.00 0.00 4.16
162 163 0.838608 ACCCGTAACTGTTTGGACCA 59.161 50.000 11.70 0.00 0.00 4.02
163 164 1.232119 CACCCGTAACTGTTTGGACC 58.768 55.000 11.70 0.00 0.00 4.46
164 165 1.232119 CCACCCGTAACTGTTTGGAC 58.768 55.000 11.70 0.00 0.00 4.02
165 166 0.838608 ACCACCCGTAACTGTTTGGA 59.161 50.000 13.58 0.00 0.00 3.53
166 167 1.682740 AACCACCCGTAACTGTTTGG 58.317 50.000 0.00 2.34 0.00 3.28
167 168 2.424246 ACAAACCACCCGTAACTGTTTG 59.576 45.455 10.80 10.80 46.82 2.93
168 169 2.424246 CACAAACCACCCGTAACTGTTT 59.576 45.455 0.00 0.00 0.00 2.83
169 170 2.018515 CACAAACCACCCGTAACTGTT 58.981 47.619 0.00 0.00 0.00 3.16
170 171 1.670791 CACAAACCACCCGTAACTGT 58.329 50.000 0.00 0.00 0.00 3.55
171 172 0.948678 CCACAAACCACCCGTAACTG 59.051 55.000 0.00 0.00 0.00 3.16
172 173 0.179012 CCCACAAACCACCCGTAACT 60.179 55.000 0.00 0.00 0.00 2.24
173 174 0.466007 ACCCACAAACCACCCGTAAC 60.466 55.000 0.00 0.00 0.00 2.50
174 175 0.179023 GACCCACAAACCACCCGTAA 60.179 55.000 0.00 0.00 0.00 3.18
175 176 1.451072 GACCCACAAACCACCCGTA 59.549 57.895 0.00 0.00 0.00 4.02
176 177 2.193786 GACCCACAAACCACCCGT 59.806 61.111 0.00 0.00 0.00 5.28
177 178 2.975799 CGACCCACAAACCACCCG 60.976 66.667 0.00 0.00 0.00 5.28
178 179 2.596338 CCGACCCACAAACCACCC 60.596 66.667 0.00 0.00 0.00 4.61
179 180 3.292159 GCCGACCCACAAACCACC 61.292 66.667 0.00 0.00 0.00 4.61
180 181 3.656045 CGCCGACCCACAAACCAC 61.656 66.667 0.00 0.00 0.00 4.16
181 182 3.700831 AACGCCGACCCACAAACCA 62.701 57.895 0.00 0.00 0.00 3.67
182 183 2.903350 AACGCCGACCCACAAACC 60.903 61.111 0.00 0.00 0.00 3.27
183 184 2.330041 CAACGCCGACCCACAAAC 59.670 61.111 0.00 0.00 0.00 2.93
184 185 2.902846 CCAACGCCGACCCACAAA 60.903 61.111 0.00 0.00 0.00 2.83
185 186 3.818121 CTCCAACGCCGACCCACAA 62.818 63.158 0.00 0.00 0.00 3.33
186 187 4.308458 CTCCAACGCCGACCCACA 62.308 66.667 0.00 0.00 0.00 4.17
187 188 3.310860 ATCTCCAACGCCGACCCAC 62.311 63.158 0.00 0.00 0.00 4.61
188 189 3.000819 ATCTCCAACGCCGACCCA 61.001 61.111 0.00 0.00 0.00 4.51
189 190 2.511600 CATCTCCAACGCCGACCC 60.512 66.667 0.00 0.00 0.00 4.46
190 191 3.195698 GCATCTCCAACGCCGACC 61.196 66.667 0.00 0.00 0.00 4.79
191 192 3.195698 GGCATCTCCAACGCCGAC 61.196 66.667 0.00 0.00 35.79 4.79
194 195 3.512516 GCTGGCATCTCCAACGCC 61.513 66.667 0.00 0.00 46.01 5.68
195 196 2.042831 AAGCTGGCATCTCCAACGC 61.043 57.895 0.00 0.00 46.01 4.84
196 197 0.957395 ACAAGCTGGCATCTCCAACG 60.957 55.000 0.00 0.00 46.01 4.10
197 198 2.113860 TACAAGCTGGCATCTCCAAC 57.886 50.000 0.00 0.00 46.01 3.77
198 199 4.712051 ATATACAAGCTGGCATCTCCAA 57.288 40.909 0.00 0.00 46.01 3.53
199 200 4.102996 TGAATATACAAGCTGGCATCTCCA 59.897 41.667 0.00 0.00 44.18 3.86
200 201 4.645535 TGAATATACAAGCTGGCATCTCC 58.354 43.478 0.00 0.00 0.00 3.71
201 202 6.814506 AATGAATATACAAGCTGGCATCTC 57.185 37.500 0.00 0.00 0.00 2.75
202 203 7.592885 AAAATGAATATACAAGCTGGCATCT 57.407 32.000 0.00 0.00 0.00 2.90
247 248 8.850156 AGTTGTACTAAAGCTTTGACAATCAAT 58.150 29.630 25.77 15.97 36.11 2.57
248 249 8.220755 AGTTGTACTAAAGCTTTGACAATCAA 57.779 30.769 25.77 18.18 34.03 2.57
249 250 7.801716 AGTTGTACTAAAGCTTTGACAATCA 57.198 32.000 25.77 14.83 0.00 2.57
252 253 9.386010 TCTAAAGTTGTACTAAAGCTTTGACAA 57.614 29.630 22.02 22.13 32.52 3.18
253 254 8.951787 TCTAAAGTTGTACTAAAGCTTTGACA 57.048 30.769 22.02 18.13 32.52 3.58
254 255 9.865484 CTTCTAAAGTTGTACTAAAGCTTTGAC 57.135 33.333 22.02 15.94 32.52 3.18
255 256 9.052759 CCTTCTAAAGTTGTACTAAAGCTTTGA 57.947 33.333 22.02 4.12 32.52 2.69
256 257 8.290325 CCCTTCTAAAGTTGTACTAAAGCTTTG 58.710 37.037 22.02 13.48 32.52 2.77
257 258 8.215736 TCCCTTCTAAAGTTGTACTAAAGCTTT 58.784 33.333 17.30 17.30 34.35 3.51
258 259 7.742767 TCCCTTCTAAAGTTGTACTAAAGCTT 58.257 34.615 0.00 0.00 0.00 3.74
259 260 7.016366 ACTCCCTTCTAAAGTTGTACTAAAGCT 59.984 37.037 0.00 0.00 0.00 3.74
260 261 7.160049 ACTCCCTTCTAAAGTTGTACTAAAGC 58.840 38.462 0.00 0.00 0.00 3.51
265 266 9.722184 GAAAATACTCCCTTCTAAAGTTGTACT 57.278 33.333 0.00 0.00 0.00 2.73
266 267 9.722184 AGAAAATACTCCCTTCTAAAGTTGTAC 57.278 33.333 0.00 0.00 0.00 2.90
268 269 9.642343 AAAGAAAATACTCCCTTCTAAAGTTGT 57.358 29.630 0.00 0.00 0.00 3.32
273 274 9.216117 CGAAGAAAGAAAATACTCCCTTCTAAA 57.784 33.333 0.00 0.00 31.99 1.85
274 275 7.333672 GCGAAGAAAGAAAATACTCCCTTCTAA 59.666 37.037 0.00 0.00 31.99 2.10
275 276 6.817140 GCGAAGAAAGAAAATACTCCCTTCTA 59.183 38.462 0.00 0.00 31.99 2.10
276 277 5.644206 GCGAAGAAAGAAAATACTCCCTTCT 59.356 40.000 0.00 0.00 31.99 2.85
277 278 5.644206 AGCGAAGAAAGAAAATACTCCCTTC 59.356 40.000 0.00 0.00 0.00 3.46
278 279 5.561679 AGCGAAGAAAGAAAATACTCCCTT 58.438 37.500 0.00 0.00 0.00 3.95
279 280 5.167303 AGCGAAGAAAGAAAATACTCCCT 57.833 39.130 0.00 0.00 0.00 4.20
280 281 4.033014 CGAGCGAAGAAAGAAAATACTCCC 59.967 45.833 0.00 0.00 0.00 4.30
281 282 4.626172 ACGAGCGAAGAAAGAAAATACTCC 59.374 41.667 0.00 0.00 0.00 3.85
282 283 5.220247 GGACGAGCGAAGAAAGAAAATACTC 60.220 44.000 0.00 0.00 0.00 2.59
358 361 6.880484 TGCATCATTCAGCCAATAAAATTCT 58.120 32.000 0.00 0.00 0.00 2.40
370 373 4.576053 TGTAGGTTGTATGCATCATTCAGC 59.424 41.667 0.19 1.13 0.00 4.26
373 376 4.881273 TGGTGTAGGTTGTATGCATCATTC 59.119 41.667 0.19 0.00 0.00 2.67
376 379 3.872696 CTGGTGTAGGTTGTATGCATCA 58.127 45.455 0.19 0.00 0.00 3.07
377 380 2.614057 GCTGGTGTAGGTTGTATGCATC 59.386 50.000 0.19 0.00 0.00 3.91
378 381 2.026356 TGCTGGTGTAGGTTGTATGCAT 60.026 45.455 3.79 3.79 0.00 3.96
379 382 1.349357 TGCTGGTGTAGGTTGTATGCA 59.651 47.619 0.00 0.00 0.00 3.96
380 383 1.737793 GTGCTGGTGTAGGTTGTATGC 59.262 52.381 0.00 0.00 0.00 3.14
383 396 3.207778 GTTTGTGCTGGTGTAGGTTGTA 58.792 45.455 0.00 0.00 0.00 2.41
389 402 3.545873 CGTTTTTGTTTGTGCTGGTGTAG 59.454 43.478 0.00 0.00 0.00 2.74
390 403 3.057456 ACGTTTTTGTTTGTGCTGGTGTA 60.057 39.130 0.00 0.00 0.00 2.90
397 410 2.338500 TCCCAACGTTTTTGTTTGTGC 58.662 42.857 0.00 0.00 0.00 4.57
402 415 2.034179 GCTAGCTCCCAACGTTTTTGTT 59.966 45.455 7.70 0.00 0.00 2.83
404 417 1.606668 TGCTAGCTCCCAACGTTTTTG 59.393 47.619 17.23 0.00 0.00 2.44
410 423 1.796796 GCTTTGCTAGCTCCCAACG 59.203 57.895 17.23 0.40 46.77 4.10
428 442 8.393366 CCTACGCATCATTTTGATCTTATATGG 58.607 37.037 0.00 0.00 34.28 2.74
438 452 2.423185 CCTTGCCTACGCATCATTTTGA 59.577 45.455 0.00 0.00 46.67 2.69
480 501 4.406456 ACAGTTTGGCAATAACAGATCCA 58.594 39.130 0.00 0.00 0.00 3.41
482 503 6.908825 TGTTACAGTTTGGCAATAACAGATC 58.091 36.000 16.23 0.00 32.30 2.75
483 504 6.892658 TGTTACAGTTTGGCAATAACAGAT 57.107 33.333 16.23 0.81 32.30 2.90
484 505 6.701145 TTGTTACAGTTTGGCAATAACAGA 57.299 33.333 18.28 10.74 37.14 3.41
485 506 9.638239 ATTATTGTTACAGTTTGGCAATAACAG 57.362 29.630 18.28 8.12 41.62 3.16
486 507 9.632807 GATTATTGTTACAGTTTGGCAATAACA 57.367 29.630 16.23 16.23 41.62 2.41
487 508 9.632807 TGATTATTGTTACAGTTTGGCAATAAC 57.367 29.630 12.36 12.36 41.62 1.89
491 512 9.800433 CATATGATTATTGTTACAGTTTGGCAA 57.200 29.630 0.00 0.00 0.00 4.52
494 515 9.236691 GTGCATATGATTATTGTTACAGTTTGG 57.763 33.333 6.97 0.00 0.00 3.28
504 525 7.585579 TGATTGGTGTGCATATGATTATTGT 57.414 32.000 6.97 0.00 0.00 2.71
505 526 8.520351 AGATGATTGGTGTGCATATGATTATTG 58.480 33.333 6.97 0.00 0.00 1.90
517 538 3.276857 AGTCATGAGATGATTGGTGTGC 58.723 45.455 0.00 0.00 42.04 4.57
519 540 3.520721 TGGAGTCATGAGATGATTGGTGT 59.479 43.478 0.00 0.00 42.04 4.16
522 543 3.129109 CGTGGAGTCATGAGATGATTGG 58.871 50.000 0.00 0.00 42.04 3.16
526 547 1.751351 GTCCGTGGAGTCATGAGATGA 59.249 52.381 0.00 0.00 36.84 2.92
539 560 1.525619 GAAGAACTTTGTCGTCCGTGG 59.474 52.381 0.00 0.00 0.00 4.94
542 565 1.792949 CCTGAAGAACTTTGTCGTCCG 59.207 52.381 0.00 0.00 0.00 4.79
544 567 2.476997 GCTCCTGAAGAACTTTGTCGTC 59.523 50.000 0.00 0.00 0.00 4.20
546 569 2.483876 TGCTCCTGAAGAACTTTGTCG 58.516 47.619 0.00 0.00 0.00 4.35
548 571 2.952310 GGTTGCTCCTGAAGAACTTTGT 59.048 45.455 0.00 0.00 0.00 2.83
550 573 2.587522 GGGTTGCTCCTGAAGAACTTT 58.412 47.619 0.00 0.00 36.25 2.66
554 577 1.149101 AAGGGGTTGCTCCTGAAGAA 58.851 50.000 0.00 0.00 34.34 2.52
556 579 2.619074 CCTAAAGGGGTTGCTCCTGAAG 60.619 54.545 0.00 0.00 34.34 3.02
561 584 2.130272 CTTCCTAAAGGGGTTGCTCC 57.870 55.000 0.00 0.00 35.41 4.70
572 595 7.001674 TGTGTTAGCTTTGATTCCTTCCTAAA 58.998 34.615 0.00 0.00 0.00 1.85
574 597 6.121776 TGTGTTAGCTTTGATTCCTTCCTA 57.878 37.500 0.00 0.00 0.00 2.94
576 599 5.302357 CTGTGTTAGCTTTGATTCCTTCC 57.698 43.478 0.00 0.00 0.00 3.46
593 616 2.108976 CGGTGACTGTGGCTGTGT 59.891 61.111 0.00 0.00 0.00 3.72
596 619 1.448540 GATCCGGTGACTGTGGCTG 60.449 63.158 0.00 0.00 0.00 4.85
601 624 1.125093 TGGTTGGATCCGGTGACTGT 61.125 55.000 7.39 0.00 0.00 3.55
603 626 0.541863 GATGGTTGGATCCGGTGACT 59.458 55.000 7.39 0.00 0.00 3.41
618 641 3.312890 ACCTAGATCCTGACCTTGATGG 58.687 50.000 0.00 0.00 42.93 3.51
619 642 5.365021 AAACCTAGATCCTGACCTTGATG 57.635 43.478 0.00 0.00 0.00 3.07
621 644 4.844085 TGAAAACCTAGATCCTGACCTTGA 59.156 41.667 0.00 0.00 0.00 3.02
622 645 5.165961 TGAAAACCTAGATCCTGACCTTG 57.834 43.478 0.00 0.00 0.00 3.61
623 646 5.104318 GGATGAAAACCTAGATCCTGACCTT 60.104 44.000 0.00 0.00 32.95 3.50
624 647 4.410555 GGATGAAAACCTAGATCCTGACCT 59.589 45.833 0.00 0.00 32.95 3.85
626 649 5.622346 AGGATGAAAACCTAGATCCTGAC 57.378 43.478 7.44 0.00 42.61 3.51
644 667 1.231641 CCTCCTCCCTCGTCAGGAT 59.768 63.158 0.00 0.00 43.65 3.24
646 669 1.454847 CTCCTCCTCCCTCGTCAGG 60.455 68.421 0.00 0.00 39.98 3.86
648 671 2.043852 GCTCCTCCTCCCTCGTCA 60.044 66.667 0.00 0.00 0.00 4.35
649 672 2.043852 TGCTCCTCCTCCCTCGTC 60.044 66.667 0.00 0.00 0.00 4.20
650 673 2.043450 CTGCTCCTCCTCCCTCGT 60.043 66.667 0.00 0.00 0.00 4.18
651 674 2.837291 CCTGCTCCTCCTCCCTCG 60.837 72.222 0.00 0.00 0.00 4.63
656 1539 1.599576 GTCCAACCTGCTCCTCCTC 59.400 63.158 0.00 0.00 0.00 3.71
665 1548 4.636435 AACGGGCGGTCCAACCTG 62.636 66.667 0.00 5.37 35.66 4.00
677 1560 2.818274 GTAGCCTTGGCGAACGGG 60.818 66.667 5.95 0.00 0.00 5.28
678 1561 3.186047 CGTAGCCTTGGCGAACGG 61.186 66.667 24.47 12.66 0.00 4.44
697 1611 0.629058 AACACCTTCGCCCCCATATT 59.371 50.000 0.00 0.00 0.00 1.28
699 1613 0.406361 AAAACACCTTCGCCCCCATA 59.594 50.000 0.00 0.00 0.00 2.74
700 1614 0.898326 GAAAACACCTTCGCCCCCAT 60.898 55.000 0.00 0.00 0.00 4.00
708 1622 4.328169 CGAACGTATAGGGAAAACACCTTC 59.672 45.833 0.00 0.00 39.54 3.46
709 1623 4.248058 CGAACGTATAGGGAAAACACCTT 58.752 43.478 0.00 0.00 39.54 3.50
711 1625 2.349580 GCGAACGTATAGGGAAAACACC 59.650 50.000 0.00 0.00 0.00 4.16
714 1628 6.594284 AAATAGCGAACGTATAGGGAAAAC 57.406 37.500 0.00 0.00 0.00 2.43
715 1629 6.817641 TCAAAATAGCGAACGTATAGGGAAAA 59.182 34.615 0.00 0.00 0.00 2.29
716 1630 6.339730 TCAAAATAGCGAACGTATAGGGAAA 58.660 36.000 0.00 0.00 0.00 3.13
719 1633 6.292703 CCTTTCAAAATAGCGAACGTATAGGG 60.293 42.308 0.00 0.00 0.00 3.53
720 1634 6.292703 CCCTTTCAAAATAGCGAACGTATAGG 60.293 42.308 0.00 0.00 0.00 2.57
721 1635 6.292703 CCCCTTTCAAAATAGCGAACGTATAG 60.293 42.308 0.00 0.00 0.00 1.31
722 1636 5.524646 CCCCTTTCAAAATAGCGAACGTATA 59.475 40.000 0.00 0.00 0.00 1.47
723 1637 4.334481 CCCCTTTCAAAATAGCGAACGTAT 59.666 41.667 0.00 0.00 0.00 3.06
724 1638 3.685756 CCCCTTTCAAAATAGCGAACGTA 59.314 43.478 0.00 0.00 0.00 3.57
725 1639 2.486592 CCCCTTTCAAAATAGCGAACGT 59.513 45.455 0.00 0.00 0.00 3.99
727 1641 3.086282 TCCCCCTTTCAAAATAGCGAAC 58.914 45.455 0.00 0.00 0.00 3.95
728 1642 3.352648 CTCCCCCTTTCAAAATAGCGAA 58.647 45.455 0.00 0.00 0.00 4.70
729 1643 2.944094 GCTCCCCCTTTCAAAATAGCGA 60.944 50.000 0.00 0.00 0.00 4.93
730 1644 1.405463 GCTCCCCCTTTCAAAATAGCG 59.595 52.381 0.00 0.00 0.00 4.26
731 1645 2.739943 AGCTCCCCCTTTCAAAATAGC 58.260 47.619 0.00 0.00 0.00 2.97
732 1646 6.129179 TCAATAGCTCCCCCTTTCAAAATAG 58.871 40.000 0.00 0.00 0.00 1.73
733 1647 6.069088 TCTCAATAGCTCCCCCTTTCAAAATA 60.069 38.462 0.00 0.00 0.00 1.40
734 1648 4.946646 TCAATAGCTCCCCCTTTCAAAAT 58.053 39.130 0.00 0.00 0.00 1.82
735 1649 4.044065 TCTCAATAGCTCCCCCTTTCAAAA 59.956 41.667 0.00 0.00 0.00 2.44
736 1650 3.591527 TCTCAATAGCTCCCCCTTTCAAA 59.408 43.478 0.00 0.00 0.00 2.69
737 1651 3.189606 TCTCAATAGCTCCCCCTTTCAA 58.810 45.455 0.00 0.00 0.00 2.69
738 1652 2.845659 TCTCAATAGCTCCCCCTTTCA 58.154 47.619 0.00 0.00 0.00 2.69
739 1653 3.456277 TCTTCTCAATAGCTCCCCCTTTC 59.544 47.826 0.00 0.00 0.00 2.62
740 1654 3.464828 TCTTCTCAATAGCTCCCCCTTT 58.535 45.455 0.00 0.00 0.00 3.11
742 1656 2.877154 TCTTCTCAATAGCTCCCCCT 57.123 50.000 0.00 0.00 0.00 4.79
743 1657 3.933861 TTTCTTCTCAATAGCTCCCCC 57.066 47.619 0.00 0.00 0.00 5.40
775 1876 6.150809 GGTTGCAGATTCTTCTCAGAAATTCT 59.849 38.462 0.00 0.00 42.53 2.40
827 1928 6.816136 TGTGTCTGAACTCTGAACTGATTAA 58.184 36.000 0.00 0.00 0.00 1.40
862 1963 4.570772 GTGCTATCATTCTTAACGCCTTGA 59.429 41.667 0.00 0.00 0.00 3.02
899 2003 2.543777 TTCTTGACTCTTTCCACGGG 57.456 50.000 0.00 0.00 0.00 5.28
900 2004 3.123621 CGAATTCTTGACTCTTTCCACGG 59.876 47.826 3.52 0.00 0.00 4.94
901 2005 3.987868 TCGAATTCTTGACTCTTTCCACG 59.012 43.478 3.52 0.00 0.00 4.94
987 2091 4.272991 TGTTTTGTTTTGCATGCTGGAATC 59.727 37.500 20.33 10.39 0.00 2.52
994 2099 4.331168 TGTAGGTTGTTTTGTTTTGCATGC 59.669 37.500 11.82 11.82 0.00 4.06
1003 2108 7.039993 GGAGGTGATTATTGTAGGTTGTTTTGT 60.040 37.037 0.00 0.00 0.00 2.83
1027 2135 0.178068 GAAGGCCAATCGCTACAGGA 59.822 55.000 5.01 0.00 37.74 3.86
1173 2281 2.434428 ACTGACACGTACTGGTAGGAG 58.566 52.381 7.34 2.71 0.00 3.69
1174 2282 2.574006 ACTGACACGTACTGGTAGGA 57.426 50.000 7.34 0.00 0.00 2.94
1175 2283 2.681848 CCTACTGACACGTACTGGTAGG 59.318 54.545 16.75 16.75 39.82 3.18
1643 2751 2.426023 GTGACGCCAAGGTCCACT 59.574 61.111 0.00 0.00 36.07 4.00
1682 2790 1.499688 TAGAGAGCGCGTCGATGAGG 61.500 60.000 9.31 0.00 0.00 3.86
1800 2908 3.950794 TAGCGAAGTTGGCCAGCCG 62.951 63.158 16.95 14.52 39.42 5.52
1817 2925 0.887387 GGTGCACGCCTTTGGACTTA 60.887 55.000 11.45 0.00 37.91 2.24
1875 2983 2.419198 CTTCGCCGGAGATGGAGG 59.581 66.667 9.30 0.00 0.00 4.30
2578 3686 2.347568 CGGTTTATGCGTCATGTCGATG 60.348 50.000 16.53 0.00 0.00 3.84
2579 3687 1.858458 CGGTTTATGCGTCATGTCGAT 59.142 47.619 16.53 9.00 0.00 3.59
2580 3688 1.273688 CGGTTTATGCGTCATGTCGA 58.726 50.000 16.53 2.10 0.00 4.20
2581 3689 0.996462 ACGGTTTATGCGTCATGTCG 59.004 50.000 8.03 8.03 0.00 4.35
2582 3690 2.268298 AGACGGTTTATGCGTCATGTC 58.732 47.619 0.00 2.26 35.37 3.06
2583 3691 2.380084 AGACGGTTTATGCGTCATGT 57.620 45.000 0.00 0.00 35.37 3.21
2590 3698 5.857822 ACAGTAAAGAAGACGGTTTATGC 57.142 39.130 0.00 0.00 0.00 3.14
2609 3717 0.452987 CCGTTGCCATGGATGAACAG 59.547 55.000 18.40 10.32 0.00 3.16
2618 3726 0.240945 GTTCTTCCACCGTTGCCATG 59.759 55.000 0.00 0.00 0.00 3.66
2623 3732 1.076332 GATCCGTTCTTCCACCGTTG 58.924 55.000 0.00 0.00 0.00 4.10
2645 3754 4.385754 GGCTCCCACTTCTCCTATTGAATT 60.386 45.833 0.00 0.00 0.00 2.17
2660 3769 0.322816 TGATGCAAGAAGGCTCCCAC 60.323 55.000 0.00 0.00 34.04 4.61
2749 3860 4.439057 TCCGTATGCACTCAAGGTTAATC 58.561 43.478 0.00 0.00 0.00 1.75
2750 3861 4.481368 TCCGTATGCACTCAAGGTTAAT 57.519 40.909 0.00 0.00 0.00 1.40
2751 3862 3.965379 TCCGTATGCACTCAAGGTTAA 57.035 42.857 0.00 0.00 0.00 2.01
2752 3863 3.431626 CCATCCGTATGCACTCAAGGTTA 60.432 47.826 0.00 0.00 0.00 2.85
2753 3864 2.632377 CATCCGTATGCACTCAAGGTT 58.368 47.619 0.00 0.00 0.00 3.50
2754 3865 1.134401 CCATCCGTATGCACTCAAGGT 60.134 52.381 0.00 0.00 0.00 3.50
2755 3866 1.138859 TCCATCCGTATGCACTCAAGG 59.861 52.381 0.00 0.00 0.00 3.61
2756 3867 2.602257 TCCATCCGTATGCACTCAAG 57.398 50.000 0.00 0.00 0.00 3.02
2757 3868 2.170397 ACATCCATCCGTATGCACTCAA 59.830 45.455 0.00 0.00 0.00 3.02
2758 3869 1.762370 ACATCCATCCGTATGCACTCA 59.238 47.619 0.00 0.00 0.00 3.41
2759 3870 2.533266 ACATCCATCCGTATGCACTC 57.467 50.000 0.00 0.00 0.00 3.51
2760 3871 2.564771 CAACATCCATCCGTATGCACT 58.435 47.619 0.00 0.00 0.00 4.40
2761 3872 1.002468 GCAACATCCATCCGTATGCAC 60.002 52.381 0.00 0.00 32.80 4.57
2762 3873 1.134128 AGCAACATCCATCCGTATGCA 60.134 47.619 0.00 0.00 34.89 3.96
2763 3874 1.597742 AGCAACATCCATCCGTATGC 58.402 50.000 0.00 0.00 0.00 3.14
2764 3875 2.738846 GCTAGCAACATCCATCCGTATG 59.261 50.000 10.63 0.00 0.00 2.39
2765 3876 2.634940 AGCTAGCAACATCCATCCGTAT 59.365 45.455 18.83 0.00 0.00 3.06
2766 3877 2.035961 GAGCTAGCAACATCCATCCGTA 59.964 50.000 18.83 0.00 0.00 4.02
2767 3878 0.833287 AGCTAGCAACATCCATCCGT 59.167 50.000 18.83 0.00 0.00 4.69
2768 3879 1.506493 GAGCTAGCAACATCCATCCG 58.494 55.000 18.83 0.00 0.00 4.18
2769 3880 1.141657 TGGAGCTAGCAACATCCATCC 59.858 52.381 18.83 12.67 36.92 3.51
2770 3881 2.627515 TGGAGCTAGCAACATCCATC 57.372 50.000 18.83 2.43 36.92 3.51
2772 3883 3.647590 TGATATGGAGCTAGCAACATCCA 59.352 43.478 21.76 21.76 45.48 3.41
2773 3884 4.277515 TGATATGGAGCTAGCAACATCC 57.722 45.455 22.40 17.79 0.00 3.51
2774 3885 7.148340 GGTTTATGATATGGAGCTAGCAACATC 60.148 40.741 22.40 14.59 0.00 3.06
2775 3886 6.656693 GGTTTATGATATGGAGCTAGCAACAT 59.343 38.462 22.38 22.38 0.00 2.71
2776 3887 5.997746 GGTTTATGATATGGAGCTAGCAACA 59.002 40.000 18.83 15.43 0.00 3.33
2777 3888 5.997746 TGGTTTATGATATGGAGCTAGCAAC 59.002 40.000 18.83 9.66 0.00 4.17
2778 3889 6.186420 TGGTTTATGATATGGAGCTAGCAA 57.814 37.500 18.83 1.95 0.00 3.91
2779 3890 5.823861 TGGTTTATGATATGGAGCTAGCA 57.176 39.130 18.83 0.00 0.00 3.49
2880 3991 3.021269 TGTACGTTGTTACTGAGCTGG 57.979 47.619 0.00 0.00 0.00 4.85
2918 4029 8.605947 TCTCTCCTCTCTAATTTCCAATTTCAA 58.394 33.333 0.00 0.00 0.00 2.69
3056 4167 6.948886 AGTCTTAGGTGTTTCACATCTCTAGA 59.051 38.462 0.00 0.00 39.16 2.43
3076 4187 4.644685 GCTACTCCTCAGATCTTCAGTCTT 59.355 45.833 0.00 0.00 0.00 3.01
3112 4223 6.055588 CCTTGGACTGTTAGAAAAGTTCTGA 58.944 40.000 0.70 0.00 40.94 3.27
3127 4238 5.205056 AGGAATCTACTACTCCTTGGACTG 58.795 45.833 0.00 0.00 36.06 3.51
3170 4281 2.479566 ATCTGTCTTTGGCGTCATGT 57.520 45.000 0.00 0.00 0.00 3.21
3261 4372 5.536161 ACAATTCTCCTTTGCAAGCTAAAGA 59.464 36.000 8.71 0.00 37.33 2.52
3478 4602 6.595682 ACCTCAATTCCTACTAATCACATGG 58.404 40.000 0.00 0.00 0.00 3.66
3518 4642 7.145932 ACATACTCATTTACAGCCTCAAAAC 57.854 36.000 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.