Multiple sequence alignment - TraesCS1D01G314000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G314000 chr1D 100.000 5486 0 0 1 5486 409071779 409066294 0.000000e+00 10131.0
1 TraesCS1D01G314000 chr1D 81.113 503 80 8 3776 4275 409068241 409067751 6.660000e-104 388.0
2 TraesCS1D01G314000 chr1D 76.294 599 105 31 273 847 384127536 384128121 8.990000e-73 285.0
3 TraesCS1D01G314000 chr1D 77.818 275 52 6 2189 2461 479769376 479769109 1.580000e-35 161.0
4 TraesCS1D01G314000 chr1D 79.891 184 26 8 2810 2988 456031669 456031492 2.070000e-24 124.0
5 TraesCS1D01G314000 chr1A 96.304 3788 89 19 1709 5486 505285532 505281786 0.000000e+00 6172.0
6 TraesCS1D01G314000 chr1A 90.922 727 41 7 971 1685 505286232 505285519 0.000000e+00 953.0
7 TraesCS1D01G314000 chr1A 80.915 503 81 10 3776 4275 505283725 505283235 3.100000e-102 383.0
8 TraesCS1D01G314000 chr1A 77.143 385 67 9 2091 2461 576213166 576212789 2.590000e-48 204.0
9 TraesCS1D01G314000 chr1A 73.693 593 119 27 273 851 483862917 483863486 4.340000e-46 196.0
10 TraesCS1D01G314000 chr1A 76.684 386 62 17 2189 2569 576215817 576215455 7.250000e-44 189.0
11 TraesCS1D01G314000 chr1A 76.104 385 59 21 2189 2568 576217859 576217503 2.630000e-38 171.0
12 TraesCS1D01G314000 chr1A 78.829 222 33 14 2563 2777 549605281 549605495 2.670000e-28 137.0
13 TraesCS1D01G314000 chr1A 91.837 49 2 2 805 852 505287349 505287302 3.550000e-07 67.6
14 TraesCS1D01G314000 chr1B 96.257 3179 103 8 1709 4882 551035046 551031879 0.000000e+00 5197.0
15 TraesCS1D01G314000 chr1B 92.632 665 36 6 974 1626 551035780 551035117 0.000000e+00 944.0
16 TraesCS1D01G314000 chr1B 91.469 633 21 12 4879 5486 551031767 551031143 0.000000e+00 839.0
17 TraesCS1D01G314000 chr1B 84.906 106 10 4 1469 1569 630557700 630557804 9.720000e-18 102.0
18 TraesCS1D01G314000 chr1B 84.906 106 10 4 1469 1569 630568312 630568416 9.720000e-18 102.0
19 TraesCS1D01G314000 chr1B 100.000 35 0 0 239 273 368415348 368415382 1.280000e-06 65.8
20 TraesCS1D01G314000 chr3B 84.130 1235 168 16 2769 3988 747746086 747744865 0.000000e+00 1170.0
21 TraesCS1D01G314000 chr3B 76.815 427 76 19 1167 1584 43047089 43046677 9.250000e-53 219.0
22 TraesCS1D01G314000 chr3B 94.872 39 1 1 235 272 7193643 7193681 5.930000e-05 60.2
23 TraesCS1D01G314000 chrUn 81.917 1283 156 39 2778 4029 108328176 108329413 0.000000e+00 1014.0
24 TraesCS1D01G314000 chrUn 88.136 649 75 2 3107 3753 134246288 134245640 0.000000e+00 771.0
25 TraesCS1D01G314000 chrUn 87.982 649 76 2 3107 3753 65140588 65139940 0.000000e+00 765.0
26 TraesCS1D01G314000 chrUn 81.481 837 112 12 3778 4614 108328928 108329721 0.000000e+00 647.0
27 TraesCS1D01G314000 chrUn 78.744 908 125 34 4028 4896 65140151 65139273 3.740000e-151 545.0
28 TraesCS1D01G314000 chrUn 83.008 512 84 1 4028 4536 134245851 134245340 1.390000e-125 460.0
29 TraesCS1D01G314000 chrUn 78.061 825 106 38 4689 5485 134245176 134244399 8.380000e-123 451.0
30 TraesCS1D01G314000 chrUn 82.667 450 40 11 2193 2626 134246857 134246430 1.120000e-96 364.0
31 TraesCS1D01G314000 chrUn 79.181 562 82 22 1024 1562 134248016 134247467 1.880000e-94 357.0
32 TraesCS1D01G314000 chrUn 79.749 558 48 31 4600 5106 108329743 108330286 1.460000e-90 344.0
33 TraesCS1D01G314000 chrUn 82.143 392 45 19 1188 1562 65142094 65141711 4.130000e-81 313.0
34 TraesCS1D01G314000 chrUn 85.039 254 35 1 3776 4029 134245854 134245604 7.050000e-64 255.0
35 TraesCS1D01G314000 chrUn 84.646 254 36 1 3776 4029 65140154 65139904 3.280000e-62 250.0
36 TraesCS1D01G314000 chrUn 81.019 216 31 7 5273 5485 65138837 65138629 4.400000e-36 163.0
37 TraesCS1D01G314000 chrUn 75.806 310 40 19 938 1214 108327145 108327452 2.070000e-24 124.0
38 TraesCS1D01G314000 chrUn 72.483 298 57 15 1280 1572 30187820 30187543 7.620000e-09 73.1
39 TraesCS1D01G314000 chrUn 90.476 42 4 0 1278 1319 95259844 95259803 7.680000e-04 56.5
40 TraesCS1D01G314000 chr4B 84.868 793 110 9 2837 3626 625962288 625963073 0.000000e+00 791.0
41 TraesCS1D01G314000 chr4B 82.360 890 123 17 3789 4670 625996489 625997352 0.000000e+00 743.0
42 TraesCS1D01G314000 chr4B 81.901 768 116 7 3076 3832 665915461 665914706 1.300000e-175 627.0
43 TraesCS1D01G314000 chr4B 83.856 638 78 9 3108 3743 666572874 666572260 7.920000e-163 584.0
44 TraesCS1D01G314000 chr4B 79.323 798 128 18 3850 4643 625963430 625964194 4.870000e-145 525.0
45 TraesCS1D01G314000 chr4B 82.583 511 84 3 4028 4534 666572461 666571952 3.900000e-121 446.0
46 TraesCS1D01G314000 chr4B 82.897 497 77 4 3537 4029 625996475 625996967 1.810000e-119 440.0
47 TraesCS1D01G314000 chr4B 83.945 436 40 17 2199 2626 666573430 666573017 1.850000e-104 390.0
48 TraesCS1D01G314000 chr4B 79.542 611 76 31 971 1560 666574572 666573990 1.850000e-104 390.0
49 TraesCS1D01G314000 chr4B 83.538 407 49 10 3376 3781 625995987 625996376 1.120000e-96 364.0
50 TraesCS1D01G314000 chr4B 81.718 454 50 17 4689 5117 666571804 666571359 1.130000e-91 348.0
51 TraesCS1D01G314000 chr4B 83.178 321 34 11 4758 5063 625997590 625997905 5.410000e-70 276.0
52 TraesCS1D01G314000 chr4B 83.858 254 38 1 3776 4029 666572464 666572214 7.100000e-59 239.0
53 TraesCS1D01G314000 chr4B 82.609 207 19 10 1474 1669 625961325 625961525 3.400000e-37 167.0
54 TraesCS1D01G314000 chr4B 80.000 220 27 11 5274 5485 625998182 625998392 4.430000e-31 147.0
55 TraesCS1D01G314000 chr4B 81.679 131 19 2 4832 4962 665961641 665961516 2.700000e-18 104.0
56 TraesCS1D01G314000 chr5A 87.091 519 64 2 3076 3591 705897371 705896853 7.920000e-163 584.0
57 TraesCS1D01G314000 chr5A 86.364 132 15 3 4514 4643 705896856 705896726 2.060000e-29 141.0
58 TraesCS1D01G314000 chr5A 94.382 89 5 0 1474 1562 705901968 705901880 2.670000e-28 137.0
59 TraesCS1D01G314000 chr5A 81.818 121 19 2 788 907 520466010 520465892 1.260000e-16 99.0
60 TraesCS1D01G314000 chr5A 100.000 37 0 0 1627 1663 705901796 705901760 9.860000e-08 69.4
61 TraesCS1D01G314000 chr6D 79.077 650 123 10 3347 3991 915574 914933 8.440000e-118 435.0
62 TraesCS1D01G314000 chr3D 75.943 424 76 20 1166 1578 25971804 25971396 1.560000e-45 195.0
63 TraesCS1D01G314000 chr2D 75.932 295 62 8 611 899 32408466 32408175 5.730000e-30 143.0
64 TraesCS1D01G314000 chr5B 80.814 172 27 5 598 765 659094537 659094368 4.460000e-26 130.0
65 TraesCS1D01G314000 chr5B 97.297 37 0 1 237 273 587339818 587339853 1.650000e-05 62.1
66 TraesCS1D01G314000 chr5B 100.000 31 0 0 242 272 510385701 510385671 2.130000e-04 58.4
67 TraesCS1D01G314000 chr2B 74.306 288 65 8 617 899 53054900 53054617 4.490000e-21 113.0
68 TraesCS1D01G314000 chr2B 97.368 38 1 0 236 273 117890848 117890885 1.280000e-06 65.8
69 TraesCS1D01G314000 chr2B 94.872 39 1 1 236 273 83563551 83563589 5.930000e-05 60.2
70 TraesCS1D01G314000 chr4A 80.000 105 19 2 457 561 600469813 600469711 5.890000e-10 76.8
71 TraesCS1D01G314000 chr4A 100.000 35 0 0 239 273 701194713 701194679 1.280000e-06 65.8
72 TraesCS1D01G314000 chr3A 97.561 41 1 0 233 273 60288060 60288020 2.740000e-08 71.3
73 TraesCS1D01G314000 chr6A 95.238 42 2 0 4841 4882 50357026 50356985 3.550000e-07 67.6
74 TraesCS1D01G314000 chr7D 95.238 42 1 1 232 273 7471674 7471634 1.280000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G314000 chr1D 409066294 409071779 5485 True 10131.000000 10131 100.000000 1 5486 1 chr1D.!!$R1 5485
1 TraesCS1D01G314000 chr1D 384127536 384128121 585 False 285.000000 285 76.294000 273 847 1 chr1D.!!$F1 574
2 TraesCS1D01G314000 chr1A 505281786 505287349 5563 True 1893.900000 6172 89.994500 805 5486 4 chr1A.!!$R1 4681
3 TraesCS1D01G314000 chr1B 551031143 551035780 4637 True 2326.666667 5197 93.452667 974 5486 3 chr1B.!!$R1 4512
4 TraesCS1D01G314000 chr3B 747744865 747746086 1221 True 1170.000000 1170 84.130000 2769 3988 1 chr3B.!!$R2 1219
5 TraesCS1D01G314000 chrUn 108327145 108330286 3141 False 532.250000 1014 79.738250 938 5106 4 chrUn.!!$F1 4168
6 TraesCS1D01G314000 chrUn 134244399 134248016 3617 True 443.000000 771 82.682000 1024 5485 6 chrUn.!!$R4 4461
7 TraesCS1D01G314000 chrUn 65138629 65142094 3465 True 407.200000 765 82.906800 1188 5485 5 chrUn.!!$R3 4297
8 TraesCS1D01G314000 chr4B 665914706 665915461 755 True 627.000000 627 81.901000 3076 3832 1 chr4B.!!$R1 756
9 TraesCS1D01G314000 chr4B 625961325 625964194 2869 False 494.333333 791 82.266667 1474 4643 3 chr4B.!!$F1 3169
10 TraesCS1D01G314000 chr4B 666571359 666574572 3213 True 399.500000 584 82.583667 971 5117 6 chr4B.!!$R3 4146
11 TraesCS1D01G314000 chr4B 625995987 625998392 2405 False 394.000000 743 82.394600 3376 5485 5 chr4B.!!$F2 2109
12 TraesCS1D01G314000 chr5A 705896726 705897371 645 True 362.500000 584 86.727500 3076 4643 2 chr5A.!!$R2 1567
13 TraesCS1D01G314000 chr6D 914933 915574 641 True 435.000000 435 79.077000 3347 3991 1 chr6D.!!$R1 644

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 110 0.030908 CTAAAACGGTTTTGCGGGCA 59.969 50.000 24.93 6.59 34.19 5.36 F
110 111 0.030908 TAAAACGGTTTTGCGGGCAG 59.969 50.000 24.93 0.00 34.19 4.85 F
435 436 0.034059 ACAGAGCCTCTTTGTGGTCG 59.966 55.000 0.00 0.00 27.56 4.79 F
859 877 0.039165 CTGTTCCAGCCCGAAAAAGC 60.039 55.000 0.00 0.00 0.00 3.51 F
876 894 0.236449 AGCCCGAAAACGCTAAAACG 59.764 50.000 0.00 0.00 39.50 3.60 F
1713 2872 0.322456 TTTGCGTGGAAGGATCAGGG 60.322 55.000 0.00 0.00 0.00 4.45 F
1717 2876 0.905357 CGTGGAAGGATCAGGGAGTT 59.095 55.000 0.00 0.00 0.00 3.01 F
1718 2877 2.108168 CGTGGAAGGATCAGGGAGTTA 58.892 52.381 0.00 0.00 0.00 2.24 F
1719 2878 2.700897 CGTGGAAGGATCAGGGAGTTAT 59.299 50.000 0.00 0.00 0.00 1.89 F
4083 6381 2.851102 ACTGCTGTGGCTGAGGGT 60.851 61.111 0.00 0.00 40.03 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1694 2853 0.322456 CCCTGATCCTTCCACGCAAA 60.322 55.000 0.00 0.0 0.00 3.68 R
1698 2857 0.905357 AACTCCCTGATCCTTCCACG 59.095 55.000 0.00 0.0 0.00 4.94 R
1909 3093 3.827302 GGTGAGTACCTTGAGTTGAGAGA 59.173 47.826 0.00 0.0 43.97 3.10 R
2780 4330 7.111247 TGCATTACCCTTCAAATTAATCCAG 57.889 36.000 0.00 0.0 0.00 3.86 R
2897 4452 8.120538 TCCTACAGATTAGTCCTTTTCCTTCTA 58.879 37.037 0.00 0.0 0.00 2.10 R
3663 5594 0.976641 TCCCAGCAAAGATGAGACGT 59.023 50.000 0.00 0.0 0.00 4.34 R
4011 6309 0.737219 GCATGTGCATCCCACTTCTC 59.263 55.000 0.00 0.0 44.92 2.87 R
4102 6400 2.484264 CAGCGGAAACCTTTACCTTCAG 59.516 50.000 0.00 0.0 0.00 3.02 R
4140 6438 4.493547 CAAAGATGAGAGTCTGTCTGTCC 58.506 47.826 0.00 0.0 34.71 4.02 R
5160 8091 0.778720 GGCTCTCTAGGCCTAGGGTA 59.221 60.000 34.07 21.5 45.57 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.946478 AGATATGGGCGGCTCTTATATC 57.054 45.455 9.56 15.84 33.19 1.63
23 24 3.319405 AGATATGGGCGGCTCTTATATCG 59.681 47.826 9.56 0.00 36.40 2.92
24 25 1.557099 ATGGGCGGCTCTTATATCGA 58.443 50.000 9.56 0.00 0.00 3.59
25 26 1.557099 TGGGCGGCTCTTATATCGAT 58.443 50.000 9.56 2.16 0.00 3.59
26 27 1.899814 TGGGCGGCTCTTATATCGATT 59.100 47.619 9.56 0.00 0.00 3.34
27 28 2.301870 TGGGCGGCTCTTATATCGATTT 59.698 45.455 9.56 0.00 0.00 2.17
28 29 3.244422 TGGGCGGCTCTTATATCGATTTT 60.244 43.478 9.56 0.00 0.00 1.82
29 30 3.125316 GGGCGGCTCTTATATCGATTTTG 59.875 47.826 9.56 0.00 0.00 2.44
30 31 3.424962 GGCGGCTCTTATATCGATTTTGC 60.425 47.826 1.71 0.24 0.00 3.68
31 32 3.722082 GCGGCTCTTATATCGATTTTGCG 60.722 47.826 1.71 0.00 0.00 4.85
32 33 3.181530 CGGCTCTTATATCGATTTTGCGG 60.182 47.826 1.71 1.51 0.00 5.69
33 34 3.994392 GGCTCTTATATCGATTTTGCGGA 59.006 43.478 1.71 0.00 0.00 5.54
34 35 4.451096 GGCTCTTATATCGATTTTGCGGAA 59.549 41.667 1.71 0.00 0.00 4.30
35 36 5.374898 GCTCTTATATCGATTTTGCGGAAC 58.625 41.667 1.71 0.00 0.00 3.62
48 49 4.699626 GGAACGGGTTTTAGCGGA 57.300 55.556 0.00 0.00 0.00 5.54
49 50 3.164026 GGAACGGGTTTTAGCGGAT 57.836 52.632 0.00 0.00 0.00 4.18
50 51 0.730840 GGAACGGGTTTTAGCGGATG 59.269 55.000 0.00 0.00 0.00 3.51
51 52 1.445871 GAACGGGTTTTAGCGGATGT 58.554 50.000 0.00 0.00 0.00 3.06
52 53 1.129811 GAACGGGTTTTAGCGGATGTG 59.870 52.381 0.00 0.00 0.00 3.21
53 54 1.303091 ACGGGTTTTAGCGGATGTGC 61.303 55.000 0.00 0.00 0.00 4.57
55 56 1.741055 CGGGTTTTAGCGGATGTGCTA 60.741 52.381 0.00 0.00 45.14 3.49
63 64 3.976793 AGCGGATGTGCTAAATTGATG 57.023 42.857 0.00 0.00 45.14 3.07
64 65 3.544684 AGCGGATGTGCTAAATTGATGA 58.455 40.909 0.00 0.00 45.14 2.92
65 66 3.313526 AGCGGATGTGCTAAATTGATGAC 59.686 43.478 0.00 0.00 45.14 3.06
66 67 3.548818 GCGGATGTGCTAAATTGATGACC 60.549 47.826 0.00 0.00 0.00 4.02
67 68 3.627123 CGGATGTGCTAAATTGATGACCA 59.373 43.478 0.00 0.00 0.00 4.02
68 69 4.260907 CGGATGTGCTAAATTGATGACCAG 60.261 45.833 0.00 0.00 0.00 4.00
69 70 4.498682 GGATGTGCTAAATTGATGACCAGC 60.499 45.833 0.00 0.00 0.00 4.85
70 71 3.419943 TGTGCTAAATTGATGACCAGCA 58.580 40.909 0.00 0.00 36.72 4.41
71 72 3.825585 TGTGCTAAATTGATGACCAGCAA 59.174 39.130 3.07 3.07 40.41 3.91
72 73 4.280425 TGTGCTAAATTGATGACCAGCAAA 59.720 37.500 4.76 0.00 40.32 3.68
73 74 5.221402 TGTGCTAAATTGATGACCAGCAAAA 60.221 36.000 4.76 0.00 40.32 2.44
74 75 5.870978 GTGCTAAATTGATGACCAGCAAAAT 59.129 36.000 4.76 0.40 40.32 1.82
75 76 6.035327 GTGCTAAATTGATGACCAGCAAAATC 59.965 38.462 4.76 0.00 40.32 2.17
76 77 5.230726 GCTAAATTGATGACCAGCAAAATCG 59.769 40.000 4.76 0.00 40.32 3.34
77 78 4.789012 AATTGATGACCAGCAAAATCGT 57.211 36.364 4.76 0.00 40.32 3.73
78 79 4.789012 ATTGATGACCAGCAAAATCGTT 57.211 36.364 4.76 0.00 40.32 3.85
79 80 4.582701 TTGATGACCAGCAAAATCGTTT 57.417 36.364 0.00 0.00 33.35 3.60
80 81 4.582701 TGATGACCAGCAAAATCGTTTT 57.417 36.364 0.00 0.00 0.00 2.43
81 82 5.697473 TGATGACCAGCAAAATCGTTTTA 57.303 34.783 0.00 0.00 0.00 1.52
82 83 5.698832 TGATGACCAGCAAAATCGTTTTAG 58.301 37.500 0.00 0.00 0.00 1.85
83 84 4.497473 TGACCAGCAAAATCGTTTTAGG 57.503 40.909 0.00 0.00 0.00 2.69
84 85 3.886505 TGACCAGCAAAATCGTTTTAGGT 59.113 39.130 10.72 10.72 35.52 3.08
85 86 4.339814 TGACCAGCAAAATCGTTTTAGGTT 59.660 37.500 11.51 0.00 34.04 3.50
86 87 4.866921 ACCAGCAAAATCGTTTTAGGTTC 58.133 39.130 0.00 0.00 31.57 3.62
87 88 3.911964 CCAGCAAAATCGTTTTAGGTTCG 59.088 43.478 0.00 0.00 0.00 3.95
88 89 3.360758 CAGCAAAATCGTTTTAGGTTCGC 59.639 43.478 0.00 0.00 0.00 4.70
89 90 2.659757 GCAAAATCGTTTTAGGTTCGCC 59.340 45.455 0.00 0.00 37.60 5.54
90 91 3.239254 CAAAATCGTTTTAGGTTCGCCC 58.761 45.455 0.00 0.00 38.27 6.13
92 93 3.615224 AATCGTTTTAGGTTCGCCCTA 57.385 42.857 0.00 0.00 43.87 3.53
98 99 3.838795 TAGGTTCGCCCTAAAACGG 57.161 52.632 0.00 0.00 43.87 4.44
99 100 0.975887 TAGGTTCGCCCTAAAACGGT 59.024 50.000 0.00 0.00 43.87 4.83
100 101 0.109153 AGGTTCGCCCTAAAACGGTT 59.891 50.000 0.00 0.00 43.87 4.44
101 102 0.953727 GGTTCGCCCTAAAACGGTTT 59.046 50.000 2.90 2.90 0.00 3.27
102 103 1.337703 GGTTCGCCCTAAAACGGTTTT 59.662 47.619 21.20 21.20 36.67 2.43
103 104 2.387185 GTTCGCCCTAAAACGGTTTTG 58.613 47.619 24.93 15.66 34.19 2.44
104 105 0.311477 TCGCCCTAAAACGGTTTTGC 59.689 50.000 24.93 19.01 34.19 3.68
105 106 0.999730 CGCCCTAAAACGGTTTTGCG 61.000 55.000 24.83 24.83 34.22 4.85
106 107 0.665068 GCCCTAAAACGGTTTTGCGG 60.665 55.000 24.93 22.45 34.19 5.69
107 108 0.038983 CCCTAAAACGGTTTTGCGGG 60.039 55.000 26.75 26.75 37.91 6.13
108 109 0.665068 CCTAAAACGGTTTTGCGGGC 60.665 55.000 24.93 0.00 34.19 6.13
109 110 0.030908 CTAAAACGGTTTTGCGGGCA 59.969 50.000 24.93 6.59 34.19 5.36
110 111 0.030908 TAAAACGGTTTTGCGGGCAG 59.969 50.000 24.93 0.00 34.19 4.85
121 122 4.559063 CGGGCAGCTCATCCCCAG 62.559 72.222 9.08 0.00 39.39 4.45
122 123 4.891037 GGGCAGCTCATCCCCAGC 62.891 72.222 4.25 0.00 38.70 4.85
124 125 4.479993 GCAGCTCATCCCCAGCGT 62.480 66.667 0.00 0.00 42.14 5.07
125 126 3.094062 GCAGCTCATCCCCAGCGTA 62.094 63.158 0.00 0.00 42.14 4.42
126 127 1.068753 CAGCTCATCCCCAGCGTAG 59.931 63.158 0.00 0.00 42.14 3.51
127 128 1.075970 AGCTCATCCCCAGCGTAGA 60.076 57.895 0.00 0.00 42.14 2.59
128 129 0.687757 AGCTCATCCCCAGCGTAGAA 60.688 55.000 0.00 0.00 42.14 2.10
129 130 0.530870 GCTCATCCCCAGCGTAGAAC 60.531 60.000 0.00 0.00 0.00 3.01
130 131 0.824109 CTCATCCCCAGCGTAGAACA 59.176 55.000 0.00 0.00 0.00 3.18
131 132 0.824109 TCATCCCCAGCGTAGAACAG 59.176 55.000 0.00 0.00 0.00 3.16
132 133 0.824109 CATCCCCAGCGTAGAACAGA 59.176 55.000 0.00 0.00 0.00 3.41
133 134 1.414181 CATCCCCAGCGTAGAACAGAT 59.586 52.381 0.00 0.00 0.00 2.90
134 135 2.447408 TCCCCAGCGTAGAACAGATA 57.553 50.000 0.00 0.00 0.00 1.98
135 136 2.029623 TCCCCAGCGTAGAACAGATAC 58.970 52.381 0.00 0.00 0.00 2.24
136 137 1.068741 CCCCAGCGTAGAACAGATACC 59.931 57.143 0.00 0.00 0.00 2.73
137 138 1.269102 CCCAGCGTAGAACAGATACCG 60.269 57.143 0.00 0.00 0.00 4.02
138 139 1.478137 CAGCGTAGAACAGATACCGC 58.522 55.000 0.00 0.00 0.00 5.68
139 140 1.100510 AGCGTAGAACAGATACCGCA 58.899 50.000 0.00 0.00 0.00 5.69
140 141 1.475280 AGCGTAGAACAGATACCGCAA 59.525 47.619 0.00 0.00 0.00 4.85
141 142 2.094390 AGCGTAGAACAGATACCGCAAA 60.094 45.455 0.00 0.00 0.00 3.68
142 143 2.028883 GCGTAGAACAGATACCGCAAAC 59.971 50.000 0.00 0.00 0.00 2.93
143 144 3.247442 CGTAGAACAGATACCGCAAACA 58.753 45.455 0.00 0.00 0.00 2.83
144 145 3.303495 CGTAGAACAGATACCGCAAACAG 59.697 47.826 0.00 0.00 0.00 3.16
145 146 3.402628 AGAACAGATACCGCAAACAGT 57.597 42.857 0.00 0.00 0.00 3.55
146 147 4.530710 AGAACAGATACCGCAAACAGTA 57.469 40.909 0.00 0.00 0.00 2.74
147 148 4.243270 AGAACAGATACCGCAAACAGTAC 58.757 43.478 0.00 0.00 0.00 2.73
148 149 2.602878 ACAGATACCGCAAACAGTACG 58.397 47.619 0.00 0.00 0.00 3.67
149 150 2.029649 ACAGATACCGCAAACAGTACGT 60.030 45.455 0.00 0.00 0.00 3.57
150 151 2.597305 CAGATACCGCAAACAGTACGTC 59.403 50.000 0.00 0.00 0.00 4.34
151 152 2.229543 AGATACCGCAAACAGTACGTCA 59.770 45.455 0.00 0.00 0.00 4.35
152 153 2.505628 TACCGCAAACAGTACGTCAA 57.494 45.000 0.00 0.00 0.00 3.18
153 154 1.654317 ACCGCAAACAGTACGTCAAA 58.346 45.000 0.00 0.00 0.00 2.69
154 155 2.215196 ACCGCAAACAGTACGTCAAAT 58.785 42.857 0.00 0.00 0.00 2.32
155 156 3.391965 ACCGCAAACAGTACGTCAAATA 58.608 40.909 0.00 0.00 0.00 1.40
156 157 3.998341 ACCGCAAACAGTACGTCAAATAT 59.002 39.130 0.00 0.00 0.00 1.28
157 158 4.453136 ACCGCAAACAGTACGTCAAATATT 59.547 37.500 0.00 0.00 0.00 1.28
158 159 5.638657 ACCGCAAACAGTACGTCAAATATTA 59.361 36.000 0.00 0.00 0.00 0.98
159 160 6.147492 ACCGCAAACAGTACGTCAAATATTAA 59.853 34.615 0.00 0.00 0.00 1.40
160 161 7.016466 CCGCAAACAGTACGTCAAATATTAAA 58.984 34.615 0.00 0.00 0.00 1.52
161 162 7.534578 CCGCAAACAGTACGTCAAATATTAAAA 59.465 33.333 0.00 0.00 0.00 1.52
162 163 8.352936 CGCAAACAGTACGTCAAATATTAAAAC 58.647 33.333 0.00 0.00 0.00 2.43
163 164 9.389570 GCAAACAGTACGTCAAATATTAAAACT 57.610 29.630 0.00 0.00 0.00 2.66
184 185 6.190954 ACTTAAACATAGATTTGTTCCCGC 57.809 37.500 0.00 0.00 38.85 6.13
185 186 5.944007 ACTTAAACATAGATTTGTTCCCGCT 59.056 36.000 0.00 0.00 38.85 5.52
186 187 7.107542 ACTTAAACATAGATTTGTTCCCGCTA 58.892 34.615 0.00 0.00 38.85 4.26
187 188 5.813080 AAACATAGATTTGTTCCCGCTAC 57.187 39.130 0.00 0.00 38.85 3.58
188 189 4.481368 ACATAGATTTGTTCCCGCTACA 57.519 40.909 0.00 0.00 0.00 2.74
189 190 5.036117 ACATAGATTTGTTCCCGCTACAT 57.964 39.130 0.00 0.00 0.00 2.29
190 191 6.169557 ACATAGATTTGTTCCCGCTACATA 57.830 37.500 0.00 0.00 0.00 2.29
191 192 6.223852 ACATAGATTTGTTCCCGCTACATAG 58.776 40.000 0.00 0.00 0.00 2.23
192 193 4.755266 AGATTTGTTCCCGCTACATAGT 57.245 40.909 0.00 0.00 0.00 2.12
193 194 5.099042 AGATTTGTTCCCGCTACATAGTT 57.901 39.130 0.00 0.00 0.00 2.24
194 195 5.116882 AGATTTGTTCCCGCTACATAGTTC 58.883 41.667 0.00 0.00 0.00 3.01
195 196 3.965379 TTGTTCCCGCTACATAGTTCA 57.035 42.857 0.00 0.00 0.00 3.18
196 197 3.520290 TGTTCCCGCTACATAGTTCAG 57.480 47.619 0.00 0.00 0.00 3.02
197 198 2.829720 TGTTCCCGCTACATAGTTCAGT 59.170 45.455 0.00 0.00 0.00 3.41
198 199 3.119245 TGTTCCCGCTACATAGTTCAGTC 60.119 47.826 0.00 0.00 0.00 3.51
199 200 2.029623 TCCCGCTACATAGTTCAGTCC 58.970 52.381 0.00 0.00 0.00 3.85
200 201 1.269102 CCCGCTACATAGTTCAGTCCG 60.269 57.143 0.00 0.00 0.00 4.79
201 202 1.269102 CCGCTACATAGTTCAGTCCGG 60.269 57.143 0.00 0.00 0.00 5.14
202 203 1.674441 CGCTACATAGTTCAGTCCGGA 59.326 52.381 0.00 0.00 0.00 5.14
203 204 2.098607 CGCTACATAGTTCAGTCCGGAA 59.901 50.000 5.23 0.00 0.00 4.30
204 205 3.445857 GCTACATAGTTCAGTCCGGAAC 58.554 50.000 5.23 0.00 45.87 3.62
208 209 4.744316 GTTCAGTCCGGAACACGT 57.256 55.556 5.23 0.00 45.07 4.49
209 210 2.514267 GTTCAGTCCGGAACACGTC 58.486 57.895 5.23 0.00 45.07 4.34
210 211 1.008194 TTCAGTCCGGAACACGTCG 60.008 57.895 5.23 0.00 42.24 5.12
211 212 2.410638 TTCAGTCCGGAACACGTCGG 62.411 60.000 5.23 7.06 46.89 4.79
216 217 3.838468 CGGAACACGTCGGAGTTC 58.162 61.111 18.79 18.79 41.32 3.01
217 218 1.008194 CGGAACACGTCGGAGTTCA 60.008 57.895 24.56 0.00 43.08 3.18
218 219 0.388134 CGGAACACGTCGGAGTTCAT 60.388 55.000 24.56 0.35 43.08 2.57
219 220 1.347320 GGAACACGTCGGAGTTCATC 58.653 55.000 24.56 11.64 43.08 2.92
220 221 1.336517 GGAACACGTCGGAGTTCATCA 60.337 52.381 24.56 0.00 43.08 3.07
221 222 2.400399 GAACACGTCGGAGTTCATCAA 58.600 47.619 20.85 0.00 41.57 2.57
222 223 1.779569 ACACGTCGGAGTTCATCAAC 58.220 50.000 0.00 0.00 0.00 3.18
223 224 1.067974 ACACGTCGGAGTTCATCAACA 59.932 47.619 0.00 0.00 34.60 3.33
224 225 1.455786 CACGTCGGAGTTCATCAACAC 59.544 52.381 0.00 0.00 34.60 3.32
225 226 1.067974 ACGTCGGAGTTCATCAACACA 59.932 47.619 0.00 0.00 34.60 3.72
226 227 2.131972 CGTCGGAGTTCATCAACACAA 58.868 47.619 0.00 0.00 34.60 3.33
227 228 2.542178 CGTCGGAGTTCATCAACACAAA 59.458 45.455 0.00 0.00 34.60 2.83
228 229 3.603857 CGTCGGAGTTCATCAACACAAAC 60.604 47.826 0.00 0.00 34.60 2.93
229 230 3.311322 GTCGGAGTTCATCAACACAAACA 59.689 43.478 0.00 0.00 34.60 2.83
230 231 3.942115 TCGGAGTTCATCAACACAAACAA 59.058 39.130 0.00 0.00 34.60 2.83
231 232 4.396478 TCGGAGTTCATCAACACAAACAAA 59.604 37.500 0.00 0.00 34.60 2.83
232 233 4.499040 CGGAGTTCATCAACACAAACAAAC 59.501 41.667 0.00 0.00 34.60 2.93
233 234 5.650543 GGAGTTCATCAACACAAACAAACT 58.349 37.500 0.00 0.00 34.60 2.66
234 235 6.457663 CGGAGTTCATCAACACAAACAAACTA 60.458 38.462 0.00 0.00 34.60 2.24
235 236 7.254852 GGAGTTCATCAACACAAACAAACTAA 58.745 34.615 0.00 0.00 34.60 2.24
236 237 7.757624 GGAGTTCATCAACACAAACAAACTAAA 59.242 33.333 0.00 0.00 34.60 1.85
237 238 9.134734 GAGTTCATCAACACAAACAAACTAAAA 57.865 29.630 0.00 0.00 34.60 1.52
238 239 9.482627 AGTTCATCAACACAAACAAACTAAAAA 57.517 25.926 0.00 0.00 34.60 1.94
239 240 9.523730 GTTCATCAACACAAACAAACTAAAAAC 57.476 29.630 0.00 0.00 32.14 2.43
240 241 8.818141 TCATCAACACAAACAAACTAAAAACA 57.182 26.923 0.00 0.00 0.00 2.83
241 242 9.429359 TCATCAACACAAACAAACTAAAAACAT 57.571 25.926 0.00 0.00 0.00 2.71
244 245 9.915629 TCAACACAAACAAACTAAAAACATACT 57.084 25.926 0.00 0.00 0.00 2.12
247 248 9.361315 ACACAAACAAACTAAAAACATACTTCC 57.639 29.630 0.00 0.00 0.00 3.46
248 249 9.581099 CACAAACAAACTAAAAACATACTTCCT 57.419 29.630 0.00 0.00 0.00 3.36
249 250 9.797556 ACAAACAAACTAAAAACATACTTCCTC 57.202 29.630 0.00 0.00 0.00 3.71
250 251 9.244799 CAAACAAACTAAAAACATACTTCCTCC 57.755 33.333 0.00 0.00 0.00 4.30
251 252 7.198306 ACAAACTAAAAACATACTTCCTCCG 57.802 36.000 0.00 0.00 0.00 4.63
252 253 6.769341 ACAAACTAAAAACATACTTCCTCCGT 59.231 34.615 0.00 0.00 0.00 4.69
253 254 7.283807 ACAAACTAAAAACATACTTCCTCCGTT 59.716 33.333 0.00 0.00 0.00 4.44
254 255 7.812690 AACTAAAAACATACTTCCTCCGTTT 57.187 32.000 0.00 0.00 0.00 3.60
255 256 7.430992 ACTAAAAACATACTTCCTCCGTTTC 57.569 36.000 0.00 0.00 0.00 2.78
256 257 6.993902 ACTAAAAACATACTTCCTCCGTTTCA 59.006 34.615 0.00 0.00 0.00 2.69
257 258 6.702716 AAAAACATACTTCCTCCGTTTCAA 57.297 33.333 0.00 0.00 0.00 2.69
258 259 6.702716 AAAACATACTTCCTCCGTTTCAAA 57.297 33.333 0.00 0.00 0.00 2.69
259 260 6.702716 AAACATACTTCCTCCGTTTCAAAA 57.297 33.333 0.00 0.00 0.00 2.44
260 261 6.894339 AACATACTTCCTCCGTTTCAAAAT 57.106 33.333 0.00 0.00 0.00 1.82
261 262 7.989416 AACATACTTCCTCCGTTTCAAAATA 57.011 32.000 0.00 0.00 0.00 1.40
262 263 7.611213 ACATACTTCCTCCGTTTCAAAATAG 57.389 36.000 0.00 0.00 0.00 1.73
263 264 7.391620 ACATACTTCCTCCGTTTCAAAATAGA 58.608 34.615 0.00 0.00 0.00 1.98
264 265 8.047310 ACATACTTCCTCCGTTTCAAAATAGAT 58.953 33.333 0.00 0.00 0.00 1.98
265 266 6.743575 ACTTCCTCCGTTTCAAAATAGATG 57.256 37.500 0.00 0.00 0.00 2.90
266 267 6.472887 ACTTCCTCCGTTTCAAAATAGATGA 58.527 36.000 0.00 0.00 0.00 2.92
267 268 6.371825 ACTTCCTCCGTTTCAAAATAGATGAC 59.628 38.462 0.00 0.00 0.00 3.06
268 269 6.049955 TCCTCCGTTTCAAAATAGATGACT 57.950 37.500 0.00 0.00 0.00 3.41
269 270 6.106673 TCCTCCGTTTCAAAATAGATGACTC 58.893 40.000 0.00 0.00 0.00 3.36
270 271 5.874810 CCTCCGTTTCAAAATAGATGACTCA 59.125 40.000 0.00 0.00 0.00 3.41
271 272 6.371548 CCTCCGTTTCAAAATAGATGACTCAA 59.628 38.462 0.00 0.00 0.00 3.02
274 275 6.797033 CCGTTTCAAAATAGATGACTCAACAC 59.203 38.462 0.00 0.00 0.00 3.32
277 278 6.466308 TCAAAATAGATGACTCAACACGTG 57.534 37.500 15.48 15.48 0.00 4.49
282 283 1.000955 GATGACTCAACACGTGGAGGT 59.999 52.381 21.57 12.49 35.45 3.85
286 287 2.816087 GACTCAACACGTGGAGGTAGTA 59.184 50.000 21.57 0.00 35.45 1.82
291 292 0.098376 CACGTGGAGGTAGTACTCGC 59.902 60.000 7.95 0.00 38.39 5.03
294 295 0.098376 GTGGAGGTAGTACTCGCACG 59.902 60.000 0.00 0.00 38.39 5.34
367 368 3.771160 TTCGGCGGCTCCCTCTTC 61.771 66.667 7.21 0.00 0.00 2.87
373 374 3.003763 GGCTCCCTCTTCACCGGT 61.004 66.667 0.00 0.00 0.00 5.28
374 375 2.579738 GCTCCCTCTTCACCGGTC 59.420 66.667 2.59 0.00 0.00 4.79
410 411 2.583593 GCGTGGTGCGAGATCTCC 60.584 66.667 17.13 10.26 44.77 3.71
411 412 2.885113 CGTGGTGCGAGATCTCCA 59.115 61.111 17.13 12.68 44.77 3.86
416 417 1.323271 GGTGCGAGATCTCCACCTCA 61.323 60.000 33.88 17.89 42.48 3.86
417 418 0.179124 GTGCGAGATCTCCACCTCAC 60.179 60.000 23.39 16.47 0.00 3.51
418 419 0.611896 TGCGAGATCTCCACCTCACA 60.612 55.000 17.13 1.86 0.00 3.58
423 424 0.463620 GATCTCCACCTCACAGAGCC 59.536 60.000 0.00 0.00 0.00 4.70
428 429 0.689623 CCACCTCACAGAGCCTCTTT 59.310 55.000 0.00 0.00 0.00 2.52
429 430 1.610102 CCACCTCACAGAGCCTCTTTG 60.610 57.143 1.29 1.29 0.00 2.77
431 432 1.071385 ACCTCACAGAGCCTCTTTGTG 59.929 52.381 7.69 7.63 44.53 3.33
435 436 0.034059 ACAGAGCCTCTTTGTGGTCG 59.966 55.000 0.00 0.00 27.56 4.79
564 565 3.075005 GAGCCGGGTGGAGCTGTA 61.075 66.667 12.94 0.00 40.11 2.74
565 566 2.606519 AGCCGGGTGGAGCTGTAA 60.607 61.111 4.72 0.00 38.11 2.41
577 578 2.579787 CTGTAAGCCTCCGCGTCG 60.580 66.667 4.92 0.00 41.18 5.12
596 597 4.697756 CATGTGGTGGCGACCCGT 62.698 66.667 16.02 5.41 42.34 5.28
597 598 4.697756 ATGTGGTGGCGACCCGTG 62.698 66.667 16.02 0.00 42.34 4.94
619 620 3.633116 CCCCACGTTCCCGACCTT 61.633 66.667 0.00 0.00 37.88 3.50
625 636 1.982938 CGTTCCCGACCTTCTCCCT 60.983 63.158 0.00 0.00 35.63 4.20
627 638 1.305887 TTCCCGACCTTCTCCCTCC 60.306 63.158 0.00 0.00 0.00 4.30
634 645 1.696884 GACCTTCTCCCTCCATGGATC 59.303 57.143 16.63 2.36 38.35 3.36
639 650 2.281345 CCCTCCATGGATCTGCGC 60.281 66.667 16.63 0.00 38.35 6.09
646 657 1.218763 CATGGATCTGCGCTTGAGAG 58.781 55.000 9.73 0.00 0.00 3.20
648 659 0.972471 TGGATCTGCGCTTGAGAGGA 60.972 55.000 9.73 0.00 0.00 3.71
653 664 1.873591 TCTGCGCTTGAGAGGAAAAAC 59.126 47.619 9.73 0.00 0.00 2.43
654 665 1.876156 CTGCGCTTGAGAGGAAAAACT 59.124 47.619 9.73 0.00 0.00 2.66
655 666 1.603802 TGCGCTTGAGAGGAAAAACTG 59.396 47.619 9.73 0.00 0.00 3.16
656 667 1.068954 GCGCTTGAGAGGAAAAACTGG 60.069 52.381 0.00 0.00 0.00 4.00
657 668 1.068954 CGCTTGAGAGGAAAAACTGGC 60.069 52.381 0.00 0.00 0.00 4.85
658 669 1.270826 GCTTGAGAGGAAAAACTGGCC 59.729 52.381 0.00 0.00 0.00 5.36
665 678 0.170339 GGAAAAACTGGCCGGAATCG 59.830 55.000 21.41 0.00 0.00 3.34
690 703 0.806492 CGGAGCTACGAAAGGAAGGC 60.806 60.000 14.92 0.00 35.47 4.35
694 707 2.125832 TACGAAAGGAAGGCGGCG 60.126 61.111 0.51 0.51 0.00 6.46
695 708 3.652539 TACGAAAGGAAGGCGGCGG 62.653 63.158 9.78 0.00 0.00 6.13
698 711 3.310860 GAAAGGAAGGCGGCGGAGA 62.311 63.158 9.78 0.00 0.00 3.71
700 713 4.761058 AGGAAGGCGGCGGAGAGA 62.761 66.667 9.78 0.00 0.00 3.10
707 721 3.082579 GCGGCGGAGAGAAGTGGAT 62.083 63.158 9.78 0.00 0.00 3.41
711 725 0.391661 GCGGAGAGAAGTGGATTGCA 60.392 55.000 0.00 0.00 0.00 4.08
715 729 0.392193 AGAGAAGTGGATTGCAGCGG 60.392 55.000 0.00 0.00 0.00 5.52
717 731 0.392193 AGAAGTGGATTGCAGCGGAG 60.392 55.000 0.00 0.00 0.00 4.63
730 744 1.208165 AGCGGAGGGGGACAAATCTT 61.208 55.000 0.00 0.00 0.00 2.40
740 754 3.134081 GGGGACAAATCTTATCCGAGACA 59.866 47.826 0.00 0.00 32.90 3.41
743 757 4.372656 GACAAATCTTATCCGAGACAGGG 58.627 47.826 0.00 0.00 0.00 4.45
745 759 4.656112 ACAAATCTTATCCGAGACAGGGAT 59.344 41.667 0.00 0.00 45.94 3.85
746 760 5.221541 ACAAATCTTATCCGAGACAGGGATC 60.222 44.000 0.00 0.00 43.17 3.36
747 761 3.885976 TCTTATCCGAGACAGGGATCT 57.114 47.619 0.00 0.00 43.17 2.75
749 763 5.320488 TCTTATCCGAGACAGGGATCTTA 57.680 43.478 0.00 0.00 43.17 2.10
755 769 2.603560 CGAGACAGGGATCTTAAAACGC 59.396 50.000 0.00 0.00 0.00 4.84
759 773 0.107361 AGGGATCTTAAAACGCCCCG 60.107 55.000 0.00 0.00 39.68 5.73
760 774 1.721664 GGGATCTTAAAACGCCCCGC 61.722 60.000 0.00 0.00 32.50 6.13
761 775 0.746923 GGATCTTAAAACGCCCCGCT 60.747 55.000 0.00 0.00 0.00 5.52
763 777 0.746923 ATCTTAAAACGCCCCGCTCC 60.747 55.000 0.00 0.00 0.00 4.70
764 778 2.360225 TTAAAACGCCCCGCTCCC 60.360 61.111 0.00 0.00 0.00 4.30
765 779 4.763646 TAAAACGCCCCGCTCCCG 62.764 66.667 0.00 0.00 0.00 5.14
772 786 3.925090 CCCCGCTCCCGTGGATAC 61.925 72.222 0.00 0.00 43.70 2.24
783 797 4.932789 TGGATACAGCGGCAGAAC 57.067 55.556 1.45 0.00 46.17 3.01
784 798 1.153647 TGGATACAGCGGCAGAACG 60.154 57.895 1.45 0.00 46.17 3.95
785 799 1.883084 GGATACAGCGGCAGAACGG 60.883 63.158 1.45 0.00 0.00 4.44
788 802 2.884087 ATACAGCGGCAGAACGGTCG 62.884 60.000 1.45 0.00 43.39 4.79
795 809 2.549282 CAGAACGGTCGGTTTGCG 59.451 61.111 0.00 0.00 39.50 4.85
838 856 1.871039 GGCCGAGAAAAATATAGCGCA 59.129 47.619 11.47 0.00 0.00 6.09
847 865 5.822519 AGAAAAATATAGCGCATCTGTTCCA 59.177 36.000 11.47 0.00 0.00 3.53
848 866 5.679734 AAAATATAGCGCATCTGTTCCAG 57.320 39.130 11.47 0.00 0.00 3.86
852 870 3.197790 CGCATCTGTTCCAGCCCG 61.198 66.667 0.00 0.00 0.00 6.13
853 871 2.268920 GCATCTGTTCCAGCCCGA 59.731 61.111 0.00 0.00 0.00 5.14
854 872 1.377202 GCATCTGTTCCAGCCCGAA 60.377 57.895 0.00 0.00 0.00 4.30
858 876 1.604604 TCTGTTCCAGCCCGAAAAAG 58.395 50.000 0.00 0.00 0.00 2.27
859 877 0.039165 CTGTTCCAGCCCGAAAAAGC 60.039 55.000 0.00 0.00 0.00 3.51
860 878 1.289066 GTTCCAGCCCGAAAAAGCC 59.711 57.895 0.00 0.00 0.00 4.35
861 879 1.906333 TTCCAGCCCGAAAAAGCCC 60.906 57.895 0.00 0.00 0.00 5.19
862 880 3.747976 CCAGCCCGAAAAAGCCCG 61.748 66.667 0.00 0.00 0.00 6.13
863 881 2.671619 CAGCCCGAAAAAGCCCGA 60.672 61.111 0.00 0.00 0.00 5.14
864 882 2.114411 AGCCCGAAAAAGCCCGAA 59.886 55.556 0.00 0.00 0.00 4.30
865 883 1.529713 AGCCCGAAAAAGCCCGAAA 60.530 52.632 0.00 0.00 0.00 3.46
866 884 1.110518 AGCCCGAAAAAGCCCGAAAA 61.111 50.000 0.00 0.00 0.00 2.29
867 885 0.942410 GCCCGAAAAAGCCCGAAAAC 60.942 55.000 0.00 0.00 0.00 2.43
868 886 0.662077 CCCGAAAAAGCCCGAAAACG 60.662 55.000 0.00 0.00 0.00 3.60
869 887 1.272784 CCGAAAAAGCCCGAAAACGC 61.273 55.000 0.00 0.00 0.00 4.84
870 888 0.317519 CGAAAAAGCCCGAAAACGCT 60.318 50.000 0.00 0.00 36.74 5.07
871 889 1.069771 CGAAAAAGCCCGAAAACGCTA 60.070 47.619 0.00 0.00 34.11 4.26
872 890 2.602694 CGAAAAAGCCCGAAAACGCTAA 60.603 45.455 0.00 0.00 34.11 3.09
873 891 3.373849 GAAAAAGCCCGAAAACGCTAAA 58.626 40.909 0.00 0.00 34.11 1.85
874 892 3.439895 AAAAGCCCGAAAACGCTAAAA 57.560 38.095 0.00 0.00 34.11 1.52
876 894 0.236449 AGCCCGAAAACGCTAAAACG 59.764 50.000 0.00 0.00 39.50 3.60
877 895 0.726787 GCCCGAAAACGCTAAAACGG 60.727 55.000 0.00 0.00 40.03 4.44
878 896 0.867086 CCCGAAAACGCTAAAACGGA 59.133 50.000 0.00 0.00 42.40 4.69
880 898 2.501881 CCGAAAACGCTAAAACGGATG 58.498 47.619 0.00 0.00 42.40 3.51
881 899 1.902504 CGAAAACGCTAAAACGGATGC 59.097 47.619 0.00 0.00 37.37 3.91
883 901 3.301706 GAAAACGCTAAAACGGATGCAA 58.698 40.909 0.00 0.00 37.37 4.08
885 903 3.569250 AACGCTAAAACGGATGCAAAT 57.431 38.095 0.00 0.00 37.37 2.32
887 905 4.893424 ACGCTAAAACGGATGCAAATAT 57.107 36.364 0.00 0.00 37.37 1.28
888 906 5.994887 ACGCTAAAACGGATGCAAATATA 57.005 34.783 0.00 0.00 37.37 0.86
889 907 5.744490 ACGCTAAAACGGATGCAAATATAC 58.256 37.500 0.00 0.00 37.37 1.47
891 909 5.845953 CGCTAAAACGGATGCAAATATACAG 59.154 40.000 0.00 0.00 0.00 2.74
892 910 6.142817 GCTAAAACGGATGCAAATATACAGG 58.857 40.000 0.00 0.00 0.00 4.00
893 911 4.568152 AAACGGATGCAAATATACAGGC 57.432 40.909 0.00 0.00 0.00 4.85
916 1861 1.532604 CGGCGGGATATACAGAGCCA 61.533 60.000 15.67 0.00 44.34 4.75
933 1878 3.416156 AGCCAAATCAGTCAAAGAGGTC 58.584 45.455 0.00 0.00 0.00 3.85
949 1924 1.704641 GGTCTCAAACCCCAAAGCTT 58.295 50.000 0.00 0.00 42.85 3.74
950 1925 1.613925 GGTCTCAAACCCCAAAGCTTC 59.386 52.381 0.00 0.00 42.85 3.86
962 1941 1.415672 AAAGCTTCCCCACTCCACGA 61.416 55.000 0.00 0.00 0.00 4.35
966 1945 1.764571 CTTCCCCACTCCACGAACCA 61.765 60.000 0.00 0.00 0.00 3.67
969 1948 1.189524 CCCCACTCCACGAACCAGTA 61.190 60.000 0.00 0.00 0.00 2.74
1061 2055 2.597217 CACCCGCACCACACCATT 60.597 61.111 0.00 0.00 0.00 3.16
1127 2143 1.938577 CACGCATTTATCTGCTCTGCT 59.061 47.619 0.00 0.00 40.06 4.24
1163 2199 2.342279 CACACGAAAGCGAGGGGA 59.658 61.111 0.00 0.00 41.64 4.81
1338 2379 1.734465 GAAATCAACAGGCTGTCGGAG 59.266 52.381 22.31 11.41 0.00 4.63
1432 2502 7.801716 TTCTATCGATTTGGGGTTTTCATAG 57.198 36.000 1.71 0.00 0.00 2.23
1581 2695 6.459573 CGGTAATCTCTCCTCTTCTTCTCAAG 60.460 46.154 0.00 0.00 0.00 3.02
1584 2698 6.720112 ATCTCTCCTCTTCTTCTCAAGATG 57.280 41.667 0.00 0.00 37.38 2.90
1586 2700 6.015918 TCTCTCCTCTTCTTCTCAAGATGTT 58.984 40.000 0.00 0.00 37.38 2.71
1587 2701 6.496565 TCTCTCCTCTTCTTCTCAAGATGTTT 59.503 38.462 0.00 0.00 37.38 2.83
1588 2702 6.696411 TCTCCTCTTCTTCTCAAGATGTTTC 58.304 40.000 0.00 0.00 37.38 2.78
1589 2703 5.799213 TCCTCTTCTTCTCAAGATGTTTCC 58.201 41.667 0.00 0.00 37.38 3.13
1685 2844 4.325344 CCATTTGGGTCAGGGAGTTATCTT 60.325 45.833 0.00 0.00 0.00 2.40
1686 2845 5.264395 CATTTGGGTCAGGGAGTTATCTTT 58.736 41.667 0.00 0.00 0.00 2.52
1687 2846 5.333566 TTTGGGTCAGGGAGTTATCTTTT 57.666 39.130 0.00 0.00 0.00 2.27
1688 2847 5.333566 TTGGGTCAGGGAGTTATCTTTTT 57.666 39.130 0.00 0.00 0.00 1.94
1712 2871 1.533625 TTTTGCGTGGAAGGATCAGG 58.466 50.000 0.00 0.00 0.00 3.86
1713 2872 0.322456 TTTGCGTGGAAGGATCAGGG 60.322 55.000 0.00 0.00 0.00 4.45
1714 2873 1.198094 TTGCGTGGAAGGATCAGGGA 61.198 55.000 0.00 0.00 0.00 4.20
1715 2874 1.144936 GCGTGGAAGGATCAGGGAG 59.855 63.158 0.00 0.00 0.00 4.30
1716 2875 1.617947 GCGTGGAAGGATCAGGGAGT 61.618 60.000 0.00 0.00 0.00 3.85
1717 2876 0.905357 CGTGGAAGGATCAGGGAGTT 59.095 55.000 0.00 0.00 0.00 3.01
1718 2877 2.108168 CGTGGAAGGATCAGGGAGTTA 58.892 52.381 0.00 0.00 0.00 2.24
1719 2878 2.700897 CGTGGAAGGATCAGGGAGTTAT 59.299 50.000 0.00 0.00 0.00 1.89
1720 2879 3.243907 CGTGGAAGGATCAGGGAGTTATC 60.244 52.174 0.00 0.00 0.00 1.75
1721 2880 3.970640 GTGGAAGGATCAGGGAGTTATCT 59.029 47.826 0.00 0.00 0.00 1.98
1829 3010 7.516470 GCGAATTATGCTGCTACTGATATCATC 60.516 40.741 5.72 0.00 0.00 2.92
1909 3093 3.901570 AGCTCTCTCTGACCCTGATAT 57.098 47.619 0.00 0.00 0.00 1.63
1973 3175 3.254166 TGAAAAGCAATCTGTCCAGCTTC 59.746 43.478 0.00 0.00 45.73 3.86
2071 3288 4.725490 CCTAAAGAAGGTTCCTGGAAACA 58.275 43.478 25.40 3.60 40.94 2.83
2185 3413 5.054477 GTCTGTTTTGTAGCAGGTGACTAA 58.946 41.667 0.00 0.00 40.21 2.24
2350 3761 3.921119 TGCTGGTTCATTTGCTGTAAG 57.079 42.857 0.00 0.00 0.00 2.34
3025 4586 5.114081 TGCACATCTATGAATGACTGACAG 58.886 41.667 0.00 0.00 0.00 3.51
3137 4725 5.586243 CCAACTATCATCATCGTGGAACTTT 59.414 40.000 0.00 0.00 31.75 2.66
3216 4804 9.859427 TGGAATTGCTACTATTCTTTTCATTTG 57.141 29.630 0.00 0.00 33.51 2.32
3630 5561 6.498304 CATATACATTGTGAAGGCAAAGGTC 58.502 40.000 0.00 0.00 31.63 3.85
4083 6381 2.851102 ACTGCTGTGGCTGAGGGT 60.851 61.111 0.00 0.00 40.03 4.34
4102 6400 8.824756 TGAGGGTGAAGATACCATATATAGTC 57.175 38.462 0.00 0.00 42.69 2.59
4455 7000 1.831389 CTCGTTCGTGCACCCTTGTG 61.831 60.000 12.15 0.00 45.65 3.33
4456 7001 2.177580 CGTTCGTGCACCCTTGTGT 61.178 57.895 12.15 0.00 44.65 3.72
5117 8043 2.018515 TCTGAAAACCGGCTTCGTTTT 58.981 42.857 0.00 0.00 33.43 2.43
5169 8100 9.594936 ACTAGATCATTCATATATACCCTAGGC 57.405 37.037 2.05 0.00 0.00 3.93
5171 8102 7.609375 AGATCATTCATATATACCCTAGGCCT 58.391 38.462 11.78 11.78 0.00 5.19
5172 8103 8.747264 AGATCATTCATATATACCCTAGGCCTA 58.253 37.037 13.09 13.09 0.00 3.93
5173 8104 8.964533 ATCATTCATATATACCCTAGGCCTAG 57.035 38.462 30.05 30.05 0.00 3.02
5229 8160 6.966534 ACTCTGAAAACAATTGGTCTGAAT 57.033 33.333 10.83 1.40 0.00 2.57
5231 8162 7.785033 ACTCTGAAAACAATTGGTCTGAATTT 58.215 30.769 10.83 0.00 0.00 1.82
5232 8163 7.707893 ACTCTGAAAACAATTGGTCTGAATTTG 59.292 33.333 10.83 4.93 0.00 2.32
5396 8462 1.861575 GAAATCAGGAGACGCCGAATC 59.138 52.381 0.00 0.00 43.43 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.319405 CGATATAAGAGCCGCCCATATCT 59.681 47.826 0.00 0.00 0.00 1.98
2 3 3.318275 TCGATATAAGAGCCGCCCATATC 59.682 47.826 0.00 0.00 0.00 1.63
3 4 3.296854 TCGATATAAGAGCCGCCCATAT 58.703 45.455 0.00 0.00 0.00 1.78
5 6 1.557099 TCGATATAAGAGCCGCCCAT 58.443 50.000 0.00 0.00 0.00 4.00
6 7 1.557099 ATCGATATAAGAGCCGCCCA 58.443 50.000 0.00 0.00 0.00 5.36
7 8 2.674796 AATCGATATAAGAGCCGCCC 57.325 50.000 0.00 0.00 0.00 6.13
8 9 3.424962 GCAAAATCGATATAAGAGCCGCC 60.425 47.826 0.00 0.00 0.00 6.13
9 10 3.722082 CGCAAAATCGATATAAGAGCCGC 60.722 47.826 0.00 0.00 0.00 6.53
10 11 3.181530 CCGCAAAATCGATATAAGAGCCG 60.182 47.826 0.00 0.00 0.00 5.52
11 12 3.994392 TCCGCAAAATCGATATAAGAGCC 59.006 43.478 0.00 0.00 0.00 4.70
12 13 5.374898 GTTCCGCAAAATCGATATAAGAGC 58.625 41.667 0.00 0.00 0.00 4.09
13 14 5.388475 CCGTTCCGCAAAATCGATATAAGAG 60.388 44.000 0.00 0.00 0.00 2.85
14 15 4.446385 CCGTTCCGCAAAATCGATATAAGA 59.554 41.667 0.00 0.00 0.00 2.10
15 16 4.377022 CCCGTTCCGCAAAATCGATATAAG 60.377 45.833 0.00 0.00 0.00 1.73
16 17 3.495377 CCCGTTCCGCAAAATCGATATAA 59.505 43.478 0.00 0.00 0.00 0.98
17 18 3.061322 CCCGTTCCGCAAAATCGATATA 58.939 45.455 0.00 0.00 0.00 0.86
18 19 1.871039 CCCGTTCCGCAAAATCGATAT 59.129 47.619 0.00 0.00 0.00 1.63
19 20 1.292061 CCCGTTCCGCAAAATCGATA 58.708 50.000 0.00 0.00 0.00 2.92
20 21 0.675522 ACCCGTTCCGCAAAATCGAT 60.676 50.000 0.00 0.00 0.00 3.59
21 22 0.885596 AACCCGTTCCGCAAAATCGA 60.886 50.000 0.00 0.00 0.00 3.59
22 23 0.039888 AAACCCGTTCCGCAAAATCG 60.040 50.000 0.00 0.00 0.00 3.34
23 24 2.143008 AAAACCCGTTCCGCAAAATC 57.857 45.000 0.00 0.00 0.00 2.17
24 25 2.608506 GCTAAAACCCGTTCCGCAAAAT 60.609 45.455 0.00 0.00 0.00 1.82
25 26 1.269154 GCTAAAACCCGTTCCGCAAAA 60.269 47.619 0.00 0.00 0.00 2.44
26 27 0.311477 GCTAAAACCCGTTCCGCAAA 59.689 50.000 0.00 0.00 0.00 3.68
27 28 1.843734 CGCTAAAACCCGTTCCGCAA 61.844 55.000 0.00 0.00 0.00 4.85
28 29 2.319096 CGCTAAAACCCGTTCCGCA 61.319 57.895 0.00 0.00 0.00 5.69
29 30 2.477396 CGCTAAAACCCGTTCCGC 59.523 61.111 0.00 0.00 0.00 5.54
30 31 0.741927 ATCCGCTAAAACCCGTTCCG 60.742 55.000 0.00 0.00 0.00 4.30
31 32 0.730840 CATCCGCTAAAACCCGTTCC 59.269 55.000 0.00 0.00 0.00 3.62
32 33 1.129811 CACATCCGCTAAAACCCGTTC 59.870 52.381 0.00 0.00 0.00 3.95
33 34 1.161843 CACATCCGCTAAAACCCGTT 58.838 50.000 0.00 0.00 0.00 4.44
34 35 1.303091 GCACATCCGCTAAAACCCGT 61.303 55.000 0.00 0.00 0.00 5.28
35 36 1.024579 AGCACATCCGCTAAAACCCG 61.025 55.000 0.00 0.00 41.55 5.28
36 37 2.032680 TAGCACATCCGCTAAAACCC 57.967 50.000 0.00 0.00 41.47 4.11
42 43 4.511454 GTCATCAATTTAGCACATCCGCTA 59.489 41.667 0.00 0.00 43.56 4.26
43 44 3.313526 GTCATCAATTTAGCACATCCGCT 59.686 43.478 0.00 0.00 46.26 5.52
44 45 3.548818 GGTCATCAATTTAGCACATCCGC 60.549 47.826 0.00 0.00 0.00 5.54
45 46 3.627123 TGGTCATCAATTTAGCACATCCG 59.373 43.478 0.00 0.00 0.00 4.18
46 47 4.498682 GCTGGTCATCAATTTAGCACATCC 60.499 45.833 0.00 0.00 0.00 3.51
47 48 4.096833 TGCTGGTCATCAATTTAGCACATC 59.903 41.667 0.00 0.00 36.37 3.06
48 49 4.018490 TGCTGGTCATCAATTTAGCACAT 58.982 39.130 0.00 0.00 36.37 3.21
49 50 3.419943 TGCTGGTCATCAATTTAGCACA 58.580 40.909 0.00 0.00 36.37 4.57
50 51 4.439305 TTGCTGGTCATCAATTTAGCAC 57.561 40.909 0.00 0.00 40.45 4.40
51 52 5.465532 TTTTGCTGGTCATCAATTTAGCA 57.534 34.783 0.00 0.00 39.17 3.49
52 53 5.230726 CGATTTTGCTGGTCATCAATTTAGC 59.769 40.000 0.00 0.00 0.00 3.09
53 54 6.324819 ACGATTTTGCTGGTCATCAATTTAG 58.675 36.000 0.00 0.00 0.00 1.85
54 55 6.266168 ACGATTTTGCTGGTCATCAATTTA 57.734 33.333 0.00 0.00 0.00 1.40
55 56 5.138125 ACGATTTTGCTGGTCATCAATTT 57.862 34.783 0.00 0.00 0.00 1.82
56 57 4.789012 ACGATTTTGCTGGTCATCAATT 57.211 36.364 0.00 0.00 0.00 2.32
57 58 4.789012 AACGATTTTGCTGGTCATCAAT 57.211 36.364 0.00 0.00 0.00 2.57
58 59 4.582701 AAACGATTTTGCTGGTCATCAA 57.417 36.364 0.00 0.00 0.00 2.57
59 60 4.582701 AAAACGATTTTGCTGGTCATCA 57.417 36.364 0.00 0.00 0.00 3.07
60 61 5.095490 CCTAAAACGATTTTGCTGGTCATC 58.905 41.667 0.00 0.00 34.19 2.92
61 62 4.522789 ACCTAAAACGATTTTGCTGGTCAT 59.477 37.500 0.00 0.00 31.42 3.06
62 63 3.886505 ACCTAAAACGATTTTGCTGGTCA 59.113 39.130 0.00 0.00 31.42 4.02
63 64 4.499037 ACCTAAAACGATTTTGCTGGTC 57.501 40.909 0.00 0.00 31.42 4.02
64 65 4.555906 CGAACCTAAAACGATTTTGCTGGT 60.556 41.667 0.00 4.44 35.31 4.00
65 66 3.911964 CGAACCTAAAACGATTTTGCTGG 59.088 43.478 0.00 3.93 34.19 4.85
66 67 3.360758 GCGAACCTAAAACGATTTTGCTG 59.639 43.478 0.00 0.00 34.19 4.41
67 68 3.561503 GCGAACCTAAAACGATTTTGCT 58.438 40.909 0.00 0.00 34.19 3.91
68 69 2.659757 GGCGAACCTAAAACGATTTTGC 59.340 45.455 0.00 0.00 34.19 3.68
69 70 3.239254 GGGCGAACCTAAAACGATTTTG 58.761 45.455 0.00 0.00 35.85 2.44
70 71 3.564235 GGGCGAACCTAAAACGATTTT 57.436 42.857 0.00 0.00 35.85 1.82
82 83 0.953727 AAACCGTTTTAGGGCGAACC 59.046 50.000 0.00 0.00 40.67 3.62
83 84 2.387185 CAAAACCGTTTTAGGGCGAAC 58.613 47.619 8.90 0.00 35.02 3.95
84 85 1.269154 GCAAAACCGTTTTAGGGCGAA 60.269 47.619 8.90 0.00 35.02 4.70
85 86 0.311477 GCAAAACCGTTTTAGGGCGA 59.689 50.000 8.90 0.00 35.02 5.54
86 87 0.999730 CGCAAAACCGTTTTAGGGCG 61.000 55.000 19.25 19.25 35.19 6.13
87 88 0.665068 CCGCAAAACCGTTTTAGGGC 60.665 55.000 16.75 12.33 35.02 5.19
88 89 0.038983 CCCGCAAAACCGTTTTAGGG 60.039 55.000 23.87 23.87 40.74 3.53
89 90 0.665068 GCCCGCAAAACCGTTTTAGG 60.665 55.000 17.26 17.26 37.30 2.69
90 91 0.030908 TGCCCGCAAAACCGTTTTAG 59.969 50.000 8.90 6.66 0.00 1.85
91 92 0.030908 CTGCCCGCAAAACCGTTTTA 59.969 50.000 8.90 0.00 0.00 1.52
92 93 1.227118 CTGCCCGCAAAACCGTTTT 60.227 52.632 3.29 3.29 0.00 2.43
93 94 2.415426 CTGCCCGCAAAACCGTTT 59.585 55.556 0.00 0.00 0.00 3.60
94 95 4.279043 GCTGCCCGCAAAACCGTT 62.279 61.111 0.00 0.00 38.92 4.44
96 97 4.404654 GAGCTGCCCGCAAAACCG 62.405 66.667 0.00 0.00 42.61 4.44
97 98 2.548127 GATGAGCTGCCCGCAAAACC 62.548 60.000 0.00 0.00 42.61 3.27
98 99 1.153958 GATGAGCTGCCCGCAAAAC 60.154 57.895 0.00 0.00 42.61 2.43
99 100 2.342650 GGATGAGCTGCCCGCAAAA 61.343 57.895 0.00 0.00 42.61 2.44
100 101 2.751436 GGATGAGCTGCCCGCAAA 60.751 61.111 0.00 0.00 42.61 3.68
101 102 4.802051 GGGATGAGCTGCCCGCAA 62.802 66.667 0.00 0.00 42.61 4.85
107 108 2.985512 CTACGCTGGGGATGAGCTGC 62.986 65.000 0.00 0.00 34.03 5.25
108 109 1.068753 CTACGCTGGGGATGAGCTG 59.931 63.158 0.00 0.00 34.03 4.24
109 110 0.687757 TTCTACGCTGGGGATGAGCT 60.688 55.000 0.00 0.00 34.03 4.09
110 111 0.530870 GTTCTACGCTGGGGATGAGC 60.531 60.000 0.00 0.00 0.00 4.26
111 112 0.824109 TGTTCTACGCTGGGGATGAG 59.176 55.000 0.00 0.00 0.00 2.90
112 113 0.824109 CTGTTCTACGCTGGGGATGA 59.176 55.000 0.00 0.00 0.00 2.92
113 114 0.824109 TCTGTTCTACGCTGGGGATG 59.176 55.000 0.00 0.00 0.00 3.51
114 115 1.794714 ATCTGTTCTACGCTGGGGAT 58.205 50.000 0.00 0.00 0.00 3.85
115 116 2.029623 GTATCTGTTCTACGCTGGGGA 58.970 52.381 0.00 0.00 0.00 4.81
116 117 1.068741 GGTATCTGTTCTACGCTGGGG 59.931 57.143 0.00 0.00 0.00 4.96
117 118 1.269102 CGGTATCTGTTCTACGCTGGG 60.269 57.143 0.00 0.00 0.00 4.45
118 119 1.864435 GCGGTATCTGTTCTACGCTGG 60.864 57.143 0.00 0.00 43.24 4.85
119 120 1.202256 TGCGGTATCTGTTCTACGCTG 60.202 52.381 8.32 0.00 46.31 5.18
120 121 1.100510 TGCGGTATCTGTTCTACGCT 58.899 50.000 8.32 0.00 46.31 5.07
121 122 1.917273 TTGCGGTATCTGTTCTACGC 58.083 50.000 0.00 0.00 46.34 4.42
122 123 3.247442 TGTTTGCGGTATCTGTTCTACG 58.753 45.455 0.00 0.00 0.00 3.51
123 124 4.243270 ACTGTTTGCGGTATCTGTTCTAC 58.757 43.478 0.00 0.00 31.28 2.59
124 125 4.530710 ACTGTTTGCGGTATCTGTTCTA 57.469 40.909 0.00 0.00 31.28 2.10
125 126 3.402628 ACTGTTTGCGGTATCTGTTCT 57.597 42.857 0.00 0.00 31.28 3.01
126 127 3.060363 CGTACTGTTTGCGGTATCTGTTC 59.940 47.826 0.00 0.00 38.57 3.18
127 128 2.991190 CGTACTGTTTGCGGTATCTGTT 59.009 45.455 0.00 0.00 38.57 3.16
128 129 2.029649 ACGTACTGTTTGCGGTATCTGT 60.030 45.455 0.00 0.00 38.57 3.41
129 130 2.597305 GACGTACTGTTTGCGGTATCTG 59.403 50.000 0.00 0.00 38.57 2.90
130 131 2.229543 TGACGTACTGTTTGCGGTATCT 59.770 45.455 0.00 0.00 38.57 1.98
131 132 2.598589 TGACGTACTGTTTGCGGTATC 58.401 47.619 0.00 0.00 38.57 2.24
132 133 2.728690 TGACGTACTGTTTGCGGTAT 57.271 45.000 0.00 0.00 38.57 2.73
133 134 2.505628 TTGACGTACTGTTTGCGGTA 57.494 45.000 0.00 0.00 37.69 4.02
134 135 1.654317 TTTGACGTACTGTTTGCGGT 58.346 45.000 0.00 0.00 37.69 5.68
135 136 2.961522 ATTTGACGTACTGTTTGCGG 57.038 45.000 0.00 0.00 37.69 5.69
136 137 7.996465 TTTAATATTTGACGTACTGTTTGCG 57.004 32.000 0.00 0.00 39.59 4.85
137 138 9.389570 AGTTTTAATATTTGACGTACTGTTTGC 57.610 29.630 0.00 0.00 0.00 3.68
158 159 7.597369 GCGGGAACAAATCTATGTTTAAGTTTT 59.403 33.333 0.00 0.00 43.31 2.43
159 160 7.039993 AGCGGGAACAAATCTATGTTTAAGTTT 60.040 33.333 0.00 0.00 43.31 2.66
160 161 6.433093 AGCGGGAACAAATCTATGTTTAAGTT 59.567 34.615 0.00 0.00 43.31 2.66
161 162 5.944007 AGCGGGAACAAATCTATGTTTAAGT 59.056 36.000 0.00 0.00 43.31 2.24
162 163 6.436843 AGCGGGAACAAATCTATGTTTAAG 57.563 37.500 0.00 0.00 43.31 1.85
163 164 6.879993 TGTAGCGGGAACAAATCTATGTTTAA 59.120 34.615 0.00 0.00 43.31 1.52
164 165 6.408035 TGTAGCGGGAACAAATCTATGTTTA 58.592 36.000 0.00 0.00 43.31 2.01
165 166 5.250200 TGTAGCGGGAACAAATCTATGTTT 58.750 37.500 0.00 0.00 43.31 2.83
166 167 4.839121 TGTAGCGGGAACAAATCTATGTT 58.161 39.130 0.00 0.00 45.82 2.71
167 168 4.481368 TGTAGCGGGAACAAATCTATGT 57.519 40.909 0.00 0.00 34.24 2.29
168 169 6.223852 ACTATGTAGCGGGAACAAATCTATG 58.776 40.000 0.00 0.00 0.00 2.23
169 170 6.420913 ACTATGTAGCGGGAACAAATCTAT 57.579 37.500 0.00 0.00 0.00 1.98
170 171 5.864418 ACTATGTAGCGGGAACAAATCTA 57.136 39.130 0.00 0.00 0.00 1.98
171 172 4.755266 ACTATGTAGCGGGAACAAATCT 57.245 40.909 0.00 0.00 0.00 2.40
172 173 4.873827 TGAACTATGTAGCGGGAACAAATC 59.126 41.667 0.00 0.00 0.00 2.17
173 174 4.839121 TGAACTATGTAGCGGGAACAAAT 58.161 39.130 0.00 0.00 0.00 2.32
174 175 4.250464 CTGAACTATGTAGCGGGAACAAA 58.750 43.478 0.00 0.00 0.00 2.83
175 176 3.259876 ACTGAACTATGTAGCGGGAACAA 59.740 43.478 0.00 0.00 0.00 2.83
176 177 2.829720 ACTGAACTATGTAGCGGGAACA 59.170 45.455 0.00 0.00 0.00 3.18
177 178 3.445857 GACTGAACTATGTAGCGGGAAC 58.554 50.000 0.00 0.00 0.00 3.62
178 179 2.429610 GGACTGAACTATGTAGCGGGAA 59.570 50.000 0.00 0.00 0.00 3.97
179 180 2.029623 GGACTGAACTATGTAGCGGGA 58.970 52.381 0.00 0.00 0.00 5.14
180 181 1.269102 CGGACTGAACTATGTAGCGGG 60.269 57.143 0.00 0.00 0.00 6.13
181 182 1.269102 CCGGACTGAACTATGTAGCGG 60.269 57.143 0.00 0.00 0.00 5.52
182 183 1.674441 TCCGGACTGAACTATGTAGCG 59.326 52.381 0.00 0.00 0.00 4.26
183 184 3.119245 TGTTCCGGACTGAACTATGTAGC 60.119 47.826 1.83 0.00 43.96 3.58
184 185 4.421948 GTGTTCCGGACTGAACTATGTAG 58.578 47.826 1.83 0.00 43.96 2.74
185 186 3.119743 CGTGTTCCGGACTGAACTATGTA 60.120 47.826 1.83 0.00 43.96 2.29
186 187 2.352421 CGTGTTCCGGACTGAACTATGT 60.352 50.000 1.83 0.00 43.96 2.29
187 188 2.259618 CGTGTTCCGGACTGAACTATG 58.740 52.381 1.83 0.00 43.96 2.23
188 189 1.891150 ACGTGTTCCGGACTGAACTAT 59.109 47.619 1.83 0.00 43.96 2.12
189 190 1.267806 GACGTGTTCCGGACTGAACTA 59.732 52.381 1.83 0.00 43.96 2.24
190 191 0.031721 GACGTGTTCCGGACTGAACT 59.968 55.000 1.83 0.00 43.96 3.01
191 192 1.273455 CGACGTGTTCCGGACTGAAC 61.273 60.000 1.83 0.00 43.90 3.18
192 193 1.008194 CGACGTGTTCCGGACTGAA 60.008 57.895 1.83 0.00 42.24 3.02
193 194 2.640989 CGACGTGTTCCGGACTGA 59.359 61.111 1.83 0.00 42.24 3.41
198 199 1.731969 GAACTCCGACGTGTTCCGG 60.732 63.158 15.61 7.06 46.57 5.14
199 200 0.388134 ATGAACTCCGACGTGTTCCG 60.388 55.000 20.54 1.14 40.30 4.30
200 201 1.336517 TGATGAACTCCGACGTGTTCC 60.337 52.381 20.54 11.53 40.30 3.62
201 202 2.060326 TGATGAACTCCGACGTGTTC 57.940 50.000 18.15 18.15 41.03 3.18
202 203 2.132762 GTTGATGAACTCCGACGTGTT 58.867 47.619 0.00 3.64 0.00 3.32
203 204 1.067974 TGTTGATGAACTCCGACGTGT 59.932 47.619 0.00 0.00 32.79 4.49
204 205 1.455786 GTGTTGATGAACTCCGACGTG 59.544 52.381 0.00 0.00 32.79 4.49
205 206 1.067974 TGTGTTGATGAACTCCGACGT 59.932 47.619 0.00 0.00 32.79 4.34
206 207 1.778334 TGTGTTGATGAACTCCGACG 58.222 50.000 0.00 0.00 32.79 5.12
207 208 3.311322 TGTTTGTGTTGATGAACTCCGAC 59.689 43.478 0.00 0.00 32.79 4.79
208 209 3.536570 TGTTTGTGTTGATGAACTCCGA 58.463 40.909 0.00 0.00 32.79 4.55
209 210 3.961477 TGTTTGTGTTGATGAACTCCG 57.039 42.857 0.00 0.00 32.79 4.63
210 211 5.650543 AGTTTGTTTGTGTTGATGAACTCC 58.349 37.500 0.00 0.00 32.79 3.85
211 212 8.682128 TTTAGTTTGTTTGTGTTGATGAACTC 57.318 30.769 0.00 0.00 32.79 3.01
212 213 9.482627 TTTTTAGTTTGTTTGTGTTGATGAACT 57.517 25.926 0.00 0.00 32.79 3.01
213 214 9.523730 GTTTTTAGTTTGTTTGTGTTGATGAAC 57.476 29.630 0.00 0.00 0.00 3.18
214 215 9.261180 TGTTTTTAGTTTGTTTGTGTTGATGAA 57.739 25.926 0.00 0.00 0.00 2.57
215 216 8.818141 TGTTTTTAGTTTGTTTGTGTTGATGA 57.182 26.923 0.00 0.00 0.00 2.92
218 219 9.915629 AGTATGTTTTTAGTTTGTTTGTGTTGA 57.084 25.926 0.00 0.00 0.00 3.18
221 222 9.361315 GGAAGTATGTTTTTAGTTTGTTTGTGT 57.639 29.630 0.00 0.00 0.00 3.72
222 223 9.581099 AGGAAGTATGTTTTTAGTTTGTTTGTG 57.419 29.630 0.00 0.00 0.00 3.33
223 224 9.797556 GAGGAAGTATGTTTTTAGTTTGTTTGT 57.202 29.630 0.00 0.00 0.00 2.83
224 225 9.244799 GGAGGAAGTATGTTTTTAGTTTGTTTG 57.755 33.333 0.00 0.00 0.00 2.93
225 226 8.132995 CGGAGGAAGTATGTTTTTAGTTTGTTT 58.867 33.333 0.00 0.00 0.00 2.83
226 227 7.283807 ACGGAGGAAGTATGTTTTTAGTTTGTT 59.716 33.333 0.00 0.00 0.00 2.83
227 228 6.769341 ACGGAGGAAGTATGTTTTTAGTTTGT 59.231 34.615 0.00 0.00 0.00 2.83
228 229 7.198306 ACGGAGGAAGTATGTTTTTAGTTTG 57.802 36.000 0.00 0.00 0.00 2.93
229 230 7.812690 AACGGAGGAAGTATGTTTTTAGTTT 57.187 32.000 0.00 0.00 0.00 2.66
230 231 7.499895 TGAAACGGAGGAAGTATGTTTTTAGTT 59.500 33.333 0.00 0.00 33.27 2.24
231 232 6.993902 TGAAACGGAGGAAGTATGTTTTTAGT 59.006 34.615 0.00 0.00 33.27 2.24
232 233 7.429636 TGAAACGGAGGAAGTATGTTTTTAG 57.570 36.000 0.00 0.00 33.27 1.85
233 234 7.804843 TTGAAACGGAGGAAGTATGTTTTTA 57.195 32.000 0.00 0.00 33.27 1.52
234 235 6.702716 TTGAAACGGAGGAAGTATGTTTTT 57.297 33.333 0.00 0.00 33.27 1.94
235 236 6.702716 TTTGAAACGGAGGAAGTATGTTTT 57.297 33.333 0.00 0.00 33.27 2.43
236 237 6.702716 TTTTGAAACGGAGGAAGTATGTTT 57.297 33.333 0.00 0.00 35.61 2.83
237 238 6.894339 ATTTTGAAACGGAGGAAGTATGTT 57.106 33.333 0.00 0.00 0.00 2.71
238 239 7.391620 TCTATTTTGAAACGGAGGAAGTATGT 58.608 34.615 0.00 0.00 0.00 2.29
239 240 7.843490 TCTATTTTGAAACGGAGGAAGTATG 57.157 36.000 0.00 0.00 0.00 2.39
240 241 8.265055 TCATCTATTTTGAAACGGAGGAAGTAT 58.735 33.333 0.00 0.00 0.00 2.12
241 242 7.548075 GTCATCTATTTTGAAACGGAGGAAGTA 59.452 37.037 0.00 0.00 0.00 2.24
242 243 6.371825 GTCATCTATTTTGAAACGGAGGAAGT 59.628 38.462 0.00 0.00 0.00 3.01
243 244 6.595716 AGTCATCTATTTTGAAACGGAGGAAG 59.404 38.462 0.00 0.00 0.00 3.46
244 245 6.472887 AGTCATCTATTTTGAAACGGAGGAA 58.527 36.000 0.00 0.00 0.00 3.36
245 246 6.049955 AGTCATCTATTTTGAAACGGAGGA 57.950 37.500 0.00 0.00 0.00 3.71
246 247 5.874810 TGAGTCATCTATTTTGAAACGGAGG 59.125 40.000 0.00 0.00 0.00 4.30
247 248 6.968131 TGAGTCATCTATTTTGAAACGGAG 57.032 37.500 0.00 0.00 0.00 4.63
248 249 6.708502 TGTTGAGTCATCTATTTTGAAACGGA 59.291 34.615 0.00 0.00 0.00 4.69
249 250 6.797033 GTGTTGAGTCATCTATTTTGAAACGG 59.203 38.462 0.00 0.00 0.00 4.44
250 251 6.516355 CGTGTTGAGTCATCTATTTTGAAACG 59.484 38.462 0.00 0.00 0.00 3.60
251 252 7.321271 CACGTGTTGAGTCATCTATTTTGAAAC 59.679 37.037 7.58 0.00 0.00 2.78
252 253 7.351981 CACGTGTTGAGTCATCTATTTTGAAA 58.648 34.615 7.58 0.00 0.00 2.69
253 254 6.073276 CCACGTGTTGAGTCATCTATTTTGAA 60.073 38.462 15.65 0.00 0.00 2.69
254 255 5.408299 CCACGTGTTGAGTCATCTATTTTGA 59.592 40.000 15.65 0.00 0.00 2.69
255 256 5.408299 TCCACGTGTTGAGTCATCTATTTTG 59.592 40.000 15.65 0.00 0.00 2.44
256 257 5.547465 TCCACGTGTTGAGTCATCTATTTT 58.453 37.500 15.65 0.00 0.00 1.82
257 258 5.147330 TCCACGTGTTGAGTCATCTATTT 57.853 39.130 15.65 0.00 0.00 1.40
258 259 4.382040 CCTCCACGTGTTGAGTCATCTATT 60.382 45.833 15.65 0.00 0.00 1.73
259 260 3.131223 CCTCCACGTGTTGAGTCATCTAT 59.869 47.826 15.65 0.00 0.00 1.98
260 261 2.492088 CCTCCACGTGTTGAGTCATCTA 59.508 50.000 15.65 0.00 0.00 1.98
261 262 1.273606 CCTCCACGTGTTGAGTCATCT 59.726 52.381 15.65 0.00 0.00 2.90
262 263 1.000955 ACCTCCACGTGTTGAGTCATC 59.999 52.381 15.65 0.00 0.00 2.92
263 264 1.048601 ACCTCCACGTGTTGAGTCAT 58.951 50.000 15.65 0.41 0.00 3.06
264 265 1.611977 CTACCTCCACGTGTTGAGTCA 59.388 52.381 15.65 4.04 0.00 3.41
265 266 1.612463 ACTACCTCCACGTGTTGAGTC 59.388 52.381 15.65 0.00 0.00 3.36
266 267 1.700955 ACTACCTCCACGTGTTGAGT 58.299 50.000 15.65 8.73 0.00 3.41
267 268 2.818432 AGTACTACCTCCACGTGTTGAG 59.182 50.000 15.65 14.20 0.00 3.02
268 269 2.816087 GAGTACTACCTCCACGTGTTGA 59.184 50.000 15.65 4.49 0.00 3.18
269 270 2.413765 CGAGTACTACCTCCACGTGTTG 60.414 54.545 15.65 6.43 0.00 3.33
270 271 1.808945 CGAGTACTACCTCCACGTGTT 59.191 52.381 15.65 0.00 0.00 3.32
271 272 1.446907 CGAGTACTACCTCCACGTGT 58.553 55.000 15.65 0.00 0.00 4.49
274 275 0.098376 GTGCGAGTACTACCTCCACG 59.902 60.000 0.00 0.00 0.00 4.94
277 278 1.063811 GCGTGCGAGTACTACCTCC 59.936 63.158 0.00 0.00 0.00 4.30
282 283 3.095911 CTCGGCGTGCGAGTACTA 58.904 61.111 6.85 0.00 0.00 1.82
300 301 3.962421 CGCCTACGCCCTCTACCG 61.962 72.222 0.00 0.00 0.00 4.02
310 311 1.276250 GACTACGAGCTCGCCTACG 59.724 63.158 34.83 19.99 44.43 3.51
359 360 3.379445 GCGACCGGTGAAGAGGGA 61.379 66.667 14.63 0.00 0.00 4.20
383 384 2.048597 CACCACGCCACGAAGCTA 60.049 61.111 0.00 0.00 0.00 3.32
395 396 1.608717 AGGTGGAGATCTCGCACCAC 61.609 60.000 37.73 29.89 45.32 4.16
402 403 1.408702 GCTCTGTGAGGTGGAGATCTC 59.591 57.143 14.75 14.75 0.00 2.75
403 404 1.484038 GCTCTGTGAGGTGGAGATCT 58.516 55.000 0.00 0.00 0.00 2.75
410 411 1.071385 ACAAAGAGGCTCTGTGAGGTG 59.929 52.381 35.53 19.81 33.50 4.00
411 412 1.071385 CACAAAGAGGCTCTGTGAGGT 59.929 52.381 35.53 15.14 42.48 3.85
416 417 0.034059 CGACCACAAAGAGGCTCTGT 59.966 55.000 19.53 10.23 0.00 3.41
417 418 0.671781 CCGACCACAAAGAGGCTCTG 60.672 60.000 19.53 10.13 0.00 3.35
418 419 1.674057 CCGACCACAAAGAGGCTCT 59.326 57.895 12.24 12.24 0.00 4.09
423 424 1.071471 ACTGGCCGACCACAAAGAG 59.929 57.895 0.00 0.00 42.67 2.85
428 429 4.624364 CAGCACTGGCCGACCACA 62.624 66.667 0.00 0.00 42.67 4.17
450 451 2.863153 CCGCTTCAACGAGCTTGG 59.137 61.111 5.79 0.00 40.52 3.61
451 452 2.174349 GCCGCTTCAACGAGCTTG 59.826 61.111 0.00 0.00 40.52 4.01
452 453 3.050275 GGCCGCTTCAACGAGCTT 61.050 61.111 0.00 0.00 40.52 3.74
548 549 2.606519 TTACAGCTCCACCCGGCT 60.607 61.111 0.00 0.00 39.60 5.52
549 550 2.125106 CTTACAGCTCCACCCGGC 60.125 66.667 0.00 0.00 0.00 6.13
551 552 2.125106 GGCTTACAGCTCCACCCG 60.125 66.667 0.00 0.00 41.99 5.28
554 555 1.153549 CGGAGGCTTACAGCTCCAC 60.154 63.158 0.00 0.00 41.99 4.02
579 580 4.697756 ACGGGTCGCCACCACATG 62.698 66.667 1.96 0.00 45.94 3.21
580 581 4.697756 CACGGGTCGCCACCACAT 62.698 66.667 1.96 0.00 45.94 3.21
608 609 1.615165 GGAGGGAGAAGGTCGGGAAC 61.615 65.000 0.00 0.00 0.00 3.62
609 610 1.305887 GGAGGGAGAAGGTCGGGAA 60.306 63.158 0.00 0.00 0.00 3.97
610 611 1.886730 ATGGAGGGAGAAGGTCGGGA 61.887 60.000 0.00 0.00 0.00 5.14
612 613 1.690219 CCATGGAGGGAGAAGGTCGG 61.690 65.000 5.56 0.00 0.00 4.79
613 614 0.687757 TCCATGGAGGGAGAAGGTCG 60.688 60.000 11.44 0.00 38.24 4.79
615 616 1.296523 AGATCCATGGAGGGAGAAGGT 59.703 52.381 21.33 0.00 41.08 3.50
619 620 1.117749 CGCAGATCCATGGAGGGAGA 61.118 60.000 21.33 0.00 41.08 3.71
625 636 0.179065 CTCAAGCGCAGATCCATGGA 60.179 55.000 18.88 18.88 0.00 3.41
627 638 1.218763 CTCTCAAGCGCAGATCCATG 58.781 55.000 11.47 0.00 0.00 3.66
634 645 1.876156 AGTTTTTCCTCTCAAGCGCAG 59.124 47.619 11.47 0.72 0.00 5.18
639 650 1.537202 CGGCCAGTTTTTCCTCTCAAG 59.463 52.381 2.24 0.00 0.00 3.02
646 657 0.170339 CGATTCCGGCCAGTTTTTCC 59.830 55.000 2.24 0.00 0.00 3.13
665 678 3.346631 TTTCGTAGCTCCGGCGACC 62.347 63.158 9.30 0.00 44.37 4.79
666 679 1.872679 CTTTCGTAGCTCCGGCGAC 60.873 63.158 9.30 0.00 44.37 5.19
671 684 0.806492 GCCTTCCTTTCGTAGCTCCG 60.806 60.000 0.00 0.00 0.00 4.63
679 692 4.752879 TCCGCCGCCTTCCTTTCG 62.753 66.667 0.00 0.00 0.00 3.46
690 703 0.807667 CAATCCACTTCTCTCCGCCG 60.808 60.000 0.00 0.00 0.00 6.46
694 707 1.377536 GCTGCAATCCACTTCTCTCC 58.622 55.000 0.00 0.00 0.00 3.71
695 708 1.005340 CGCTGCAATCCACTTCTCTC 58.995 55.000 0.00 0.00 0.00 3.20
698 711 0.392193 CTCCGCTGCAATCCACTTCT 60.392 55.000 0.00 0.00 0.00 2.85
700 713 1.377725 CCTCCGCTGCAATCCACTT 60.378 57.895 0.00 0.00 0.00 3.16
711 725 1.208165 AAGATTTGTCCCCCTCCGCT 61.208 55.000 0.00 0.00 0.00 5.52
715 729 2.704065 TCGGATAAGATTTGTCCCCCTC 59.296 50.000 0.00 0.00 37.64 4.30
717 731 2.704065 TCTCGGATAAGATTTGTCCCCC 59.296 50.000 0.00 0.00 37.64 5.40
725 739 4.746466 AGATCCCTGTCTCGGATAAGATT 58.254 43.478 0.00 0.00 40.33 2.40
730 744 5.221185 CGTTTTAAGATCCCTGTCTCGGATA 60.221 44.000 0.00 0.00 40.33 2.59
740 754 0.107361 CGGGGCGTTTTAAGATCCCT 60.107 55.000 0.00 0.00 37.16 4.20
743 757 0.656259 GAGCGGGGCGTTTTAAGATC 59.344 55.000 0.00 0.00 0.00 2.75
745 759 1.376295 GGAGCGGGGCGTTTTAAGA 60.376 57.895 0.00 0.00 0.00 2.10
746 760 2.404186 GGGAGCGGGGCGTTTTAAG 61.404 63.158 0.00 0.00 0.00 1.85
747 761 2.360225 GGGAGCGGGGCGTTTTAA 60.360 61.111 0.00 0.00 0.00 1.52
755 769 3.925090 GTATCCACGGGAGCGGGG 61.925 72.222 0.00 0.00 34.05 5.73
759 773 2.279517 CGCTGTATCCACGGGAGC 60.280 66.667 0.00 0.00 34.05 4.70
760 774 2.417516 CCGCTGTATCCACGGGAG 59.582 66.667 0.00 0.00 43.23 4.30
761 775 3.845259 GCCGCTGTATCCACGGGA 61.845 66.667 2.57 0.00 46.97 5.14
764 778 1.153647 TTCTGCCGCTGTATCCACG 60.154 57.895 0.00 0.00 0.00 4.94
765 779 1.421410 CGTTCTGCCGCTGTATCCAC 61.421 60.000 0.00 0.00 0.00 4.02
766 780 1.153647 CGTTCTGCCGCTGTATCCA 60.154 57.895 0.00 0.00 0.00 3.41
767 781 1.883084 CCGTTCTGCCGCTGTATCC 60.883 63.158 0.00 0.00 0.00 2.59
768 782 1.146358 GACCGTTCTGCCGCTGTATC 61.146 60.000 0.00 0.00 0.00 2.24
779 793 2.663852 CCGCAAACCGACCGTTCT 60.664 61.111 0.00 0.00 40.02 3.01
795 809 2.723231 AAAAATATACGGGCGGCCC 58.277 52.632 28.61 28.61 41.09 5.80
847 865 1.110518 TTTTCGGGCTTTTTCGGGCT 61.111 50.000 0.00 0.00 0.00 5.19
848 866 0.942410 GTTTTCGGGCTTTTTCGGGC 60.942 55.000 0.00 0.00 0.00 6.13
852 870 2.691984 TAGCGTTTTCGGGCTTTTTC 57.308 45.000 0.00 0.00 44.29 2.29
853 871 3.439895 TTTAGCGTTTTCGGGCTTTTT 57.560 38.095 0.00 0.00 44.29 1.94
854 872 3.117794 GTTTTAGCGTTTTCGGGCTTTT 58.882 40.909 0.00 0.00 44.29 2.27
858 876 0.726787 CCGTTTTAGCGTTTTCGGGC 60.727 55.000 0.00 0.00 44.29 6.13
859 877 0.867086 TCCGTTTTAGCGTTTTCGGG 59.133 50.000 11.29 0.00 44.29 5.14
860 878 2.501881 CATCCGTTTTAGCGTTTTCGG 58.498 47.619 6.40 6.40 44.29 4.30
862 880 2.923643 TGCATCCGTTTTAGCGTTTTC 58.076 42.857 0.00 0.00 0.00 2.29
863 881 3.357166 TTGCATCCGTTTTAGCGTTTT 57.643 38.095 0.00 0.00 0.00 2.43
864 882 3.357166 TTTGCATCCGTTTTAGCGTTT 57.643 38.095 0.00 0.00 0.00 3.60
865 883 3.569250 ATTTGCATCCGTTTTAGCGTT 57.431 38.095 0.00 0.00 0.00 4.84
866 884 4.893424 ATATTTGCATCCGTTTTAGCGT 57.107 36.364 0.00 0.00 0.00 5.07
867 885 5.743467 TGTATATTTGCATCCGTTTTAGCG 58.257 37.500 0.00 0.00 0.00 4.26
868 886 6.142817 CCTGTATATTTGCATCCGTTTTAGC 58.857 40.000 0.00 0.00 0.00 3.09
869 887 6.142817 GCCTGTATATTTGCATCCGTTTTAG 58.857 40.000 0.00 0.00 0.00 1.85
870 888 5.009210 GGCCTGTATATTTGCATCCGTTTTA 59.991 40.000 0.00 0.00 0.00 1.52
871 889 4.202111 GGCCTGTATATTTGCATCCGTTTT 60.202 41.667 0.00 0.00 0.00 2.43
872 890 3.317993 GGCCTGTATATTTGCATCCGTTT 59.682 43.478 0.00 0.00 0.00 3.60
873 891 2.884639 GGCCTGTATATTTGCATCCGTT 59.115 45.455 0.00 0.00 0.00 4.44
874 892 2.504367 GGCCTGTATATTTGCATCCGT 58.496 47.619 0.00 0.00 0.00 4.69
876 894 1.812571 CCGGCCTGTATATTTGCATCC 59.187 52.381 0.00 0.00 0.00 3.51
877 895 1.200020 GCCGGCCTGTATATTTGCATC 59.800 52.381 18.11 0.00 0.00 3.91
878 896 1.247567 GCCGGCCTGTATATTTGCAT 58.752 50.000 18.11 0.00 0.00 3.96
880 898 1.574428 CGCCGGCCTGTATATTTGC 59.426 57.895 23.46 0.00 0.00 3.68
881 899 1.852067 GCCGCCGGCCTGTATATTTG 61.852 60.000 23.46 1.66 44.06 2.32
883 901 2.032071 GCCGCCGGCCTGTATATT 59.968 61.111 23.46 0.00 44.06 1.28
916 1861 5.532779 GGTTTGAGACCTCTTTGACTGATTT 59.467 40.000 0.00 0.00 45.55 2.17
933 1878 0.969149 GGGAAGCTTTGGGGTTTGAG 59.031 55.000 0.00 0.00 35.61 3.02
945 1920 1.841556 TTCGTGGAGTGGGGAAGCT 60.842 57.895 0.00 0.00 0.00 3.74
946 1921 1.671379 GTTCGTGGAGTGGGGAAGC 60.671 63.158 0.00 0.00 0.00 3.86
949 1924 2.122769 TGGTTCGTGGAGTGGGGA 60.123 61.111 0.00 0.00 0.00 4.81
950 1925 1.189524 TACTGGTTCGTGGAGTGGGG 61.190 60.000 0.00 0.00 0.00 4.96
962 1941 0.896226 GCGAGAGAGGGTTACTGGTT 59.104 55.000 0.00 0.00 0.00 3.67
966 1945 0.626916 AGGAGCGAGAGAGGGTTACT 59.373 55.000 0.00 0.00 0.00 2.24
969 1948 2.355193 GCAGGAGCGAGAGAGGGTT 61.355 63.158 0.00 0.00 0.00 4.11
1061 2055 1.229368 TCGTGGAGTGGGGAATCCA 60.229 57.895 0.09 0.00 43.34 3.41
1127 2143 2.204034 TGGCAGTGACCCTGGAGA 59.796 61.111 0.00 0.00 41.81 3.71
1415 2483 9.918630 CATGATTATCTATGAAAACCCCAAATC 57.081 33.333 0.00 0.00 0.00 2.17
1432 2502 2.908634 CGCGAACAAGCCATGATTATC 58.091 47.619 0.00 0.00 0.00 1.75
1692 2851 1.885887 CCTGATCCTTCCACGCAAAAA 59.114 47.619 0.00 0.00 0.00 1.94
1693 2852 1.533625 CCTGATCCTTCCACGCAAAA 58.466 50.000 0.00 0.00 0.00 2.44
1694 2853 0.322456 CCCTGATCCTTCCACGCAAA 60.322 55.000 0.00 0.00 0.00 3.68
1695 2854 1.198094 TCCCTGATCCTTCCACGCAA 61.198 55.000 0.00 0.00 0.00 4.85
1696 2855 1.612146 TCCCTGATCCTTCCACGCA 60.612 57.895 0.00 0.00 0.00 5.24
1697 2856 1.144936 CTCCCTGATCCTTCCACGC 59.855 63.158 0.00 0.00 0.00 5.34
1698 2857 0.905357 AACTCCCTGATCCTTCCACG 59.095 55.000 0.00 0.00 0.00 4.94
1699 2858 3.970640 AGATAACTCCCTGATCCTTCCAC 59.029 47.826 0.00 0.00 0.00 4.02
1700 2859 4.286813 AGATAACTCCCTGATCCTTCCA 57.713 45.455 0.00 0.00 0.00 3.53
1701 2860 5.782845 ACATAGATAACTCCCTGATCCTTCC 59.217 44.000 0.00 0.00 0.00 3.46
1702 2861 6.926630 ACATAGATAACTCCCTGATCCTTC 57.073 41.667 0.00 0.00 0.00 3.46
1703 2862 6.439058 GCTACATAGATAACTCCCTGATCCTT 59.561 42.308 0.00 0.00 0.00 3.36
1704 2863 5.955355 GCTACATAGATAACTCCCTGATCCT 59.045 44.000 0.00 0.00 0.00 3.24
1705 2864 5.955355 AGCTACATAGATAACTCCCTGATCC 59.045 44.000 0.00 0.00 0.00 3.36
1706 2865 7.475137 AAGCTACATAGATAACTCCCTGATC 57.525 40.000 0.00 0.00 0.00 2.92
1707 2866 7.863901 AAAGCTACATAGATAACTCCCTGAT 57.136 36.000 0.00 0.00 0.00 2.90
1708 2867 8.807118 CATAAAGCTACATAGATAACTCCCTGA 58.193 37.037 0.00 0.00 0.00 3.86
1709 2868 8.807118 TCATAAAGCTACATAGATAACTCCCTG 58.193 37.037 0.00 0.00 0.00 4.45
1710 2869 8.958060 TCATAAAGCTACATAGATAACTCCCT 57.042 34.615 0.00 0.00 0.00 4.20
1711 2870 9.593134 CATCATAAAGCTACATAGATAACTCCC 57.407 37.037 0.00 0.00 0.00 4.30
1714 2873 9.429359 GCACATCATAAAGCTACATAGATAACT 57.571 33.333 0.00 0.00 0.00 2.24
1715 2874 9.429359 AGCACATCATAAAGCTACATAGATAAC 57.571 33.333 0.00 0.00 35.19 1.89
1716 2875 9.645059 GAGCACATCATAAAGCTACATAGATAA 57.355 33.333 0.00 0.00 37.48 1.75
1717 2876 8.806146 TGAGCACATCATAAAGCTACATAGATA 58.194 33.333 0.00 0.00 37.48 1.98
1718 2877 7.674120 TGAGCACATCATAAAGCTACATAGAT 58.326 34.615 0.00 0.00 37.48 1.98
1719 2878 7.054491 TGAGCACATCATAAAGCTACATAGA 57.946 36.000 0.00 0.00 37.48 1.98
1720 2879 7.719778 TTGAGCACATCATAAAGCTACATAG 57.280 36.000 0.00 0.00 37.89 2.23
1721 2880 9.428097 CTATTGAGCACATCATAAAGCTACATA 57.572 33.333 0.00 0.00 37.89 2.29
1829 3010 6.391227 AGTTCTACATTGAACACAAAAGGG 57.609 37.500 9.56 0.00 46.19 3.95
1909 3093 3.827302 GGTGAGTACCTTGAGTTGAGAGA 59.173 47.826 0.00 0.00 43.97 3.10
1973 3175 7.558161 TGACTAAGAAAATCATGGCATACAG 57.442 36.000 0.00 0.00 0.00 2.74
2070 3287 8.141298 ACCTAACCCCTAATTAATGGTTTTTG 57.859 34.615 18.44 12.05 41.22 2.44
2071 3288 8.745149 AACCTAACCCCTAATTAATGGTTTTT 57.255 30.769 18.44 10.23 41.22 1.94
2185 3413 8.760735 CAAGATCCATCTCATTAGTATCCTCAT 58.239 37.037 0.00 0.00 35.76 2.90
2780 4330 7.111247 TGCATTACCCTTCAAATTAATCCAG 57.889 36.000 0.00 0.00 0.00 3.86
2897 4452 8.120538 TCCTACAGATTAGTCCTTTTCCTTCTA 58.879 37.037 0.00 0.00 0.00 2.10
2957 4512 7.441157 TCAAGTATCTTACACAAAGTTGACAGG 59.559 37.037 0.00 0.00 36.51 4.00
3004 4565 5.114081 TGCTGTCAGTCATTCATAGATGTG 58.886 41.667 0.93 0.00 0.00 3.21
3025 4586 1.474077 CAGGACTGTTTTGGGCTATGC 59.526 52.381 0.00 0.00 0.00 3.14
3137 4725 4.799678 CACATTAACCGCAACAAACCATA 58.200 39.130 0.00 0.00 0.00 2.74
3216 4804 5.175673 GCTTTCATTAAAGACACCAAACTGC 59.824 40.000 3.51 0.00 44.14 4.40
3630 5561 2.518949 CAAATGCCGGTTTCATCGAAG 58.481 47.619 1.90 0.00 0.00 3.79
3663 5594 0.976641 TCCCAGCAAAGATGAGACGT 59.023 50.000 0.00 0.00 0.00 4.34
4011 6309 0.737219 GCATGTGCATCCCACTTCTC 59.263 55.000 0.00 0.00 44.92 2.87
4102 6400 2.484264 CAGCGGAAACCTTTACCTTCAG 59.516 50.000 0.00 0.00 0.00 3.02
4140 6438 4.493547 CAAAGATGAGAGTCTGTCTGTCC 58.506 47.826 0.00 0.00 34.71 4.02
4455 7000 0.460987 CAGGAGGACGGATCTGCAAC 60.461 60.000 0.00 0.00 0.00 4.17
4456 7001 1.617018 CCAGGAGGACGGATCTGCAA 61.617 60.000 0.00 0.00 36.89 4.08
4646 7251 0.317160 TACACAGGGTTGCGAGTGAG 59.683 55.000 0.00 0.00 35.97 3.51
5117 8043 8.220755 AGTTTAATGAGCTTCAGTTACACAAA 57.779 30.769 0.00 0.00 0.00 2.83
5158 8089 2.581709 GGCTCTCTAGGCCTAGGGTATA 59.418 54.545 34.07 17.88 45.57 1.47
5160 8091 0.778720 GGCTCTCTAGGCCTAGGGTA 59.221 60.000 34.07 21.50 45.57 3.69
5169 8100 2.206635 CCACCACAGGCTCTCTAGG 58.793 63.158 0.00 0.00 0.00 3.02
5188 8119 5.480772 TCAGAGTACCAGGAAAGGAAAGTAG 59.519 44.000 0.00 0.00 0.00 2.57
5229 8160 3.680937 GGTACGACCGAATGATCAACAAA 59.319 43.478 0.00 0.00 0.00 2.83
5231 8162 2.494471 AGGTACGACCGAATGATCAACA 59.506 45.455 0.00 0.00 44.90 3.33
5232 8163 3.160777 AGGTACGACCGAATGATCAAC 57.839 47.619 0.00 0.00 44.90 3.18
5396 8462 3.447229 AGTTTCAGTTTCAGGGTTGTTGG 59.553 43.478 0.00 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.