Multiple sequence alignment - TraesCS1D01G313700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G313700 chr1D 100.000 4043 0 0 1 4043 409045496 409049538 0.000000e+00 7467.0
1 TraesCS1D01G313700 chr1D 79.703 202 22 10 869 1063 409016698 409016887 1.180000e-25 128.0
2 TraesCS1D01G313700 chr1D 90.476 42 4 0 439 480 400402241 400402282 5.650000e-04 56.5
3 TraesCS1D01G313700 chr1A 95.488 1485 50 11 2564 4043 505269905 505271377 0.000000e+00 2355.0
4 TraesCS1D01G313700 chr1A 93.471 1164 42 11 1648 2794 505268761 505269907 0.000000e+00 1698.0
5 TraesCS1D01G313700 chr1A 90.449 534 21 8 1019 1548 505268201 505268708 0.000000e+00 676.0
6 TraesCS1D01G313700 chr1A 87.234 564 52 13 1 548 505254498 505255057 3.430000e-175 625.0
7 TraesCS1D01G313700 chr1A 89.041 73 4 1 793 861 505266913 505266985 2.000000e-13 87.9
8 TraesCS1D01G313700 chr1B 93.812 1519 50 13 2564 4043 551009931 551011444 0.000000e+00 2244.0
9 TraesCS1D01G313700 chr1B 97.794 680 12 1 2115 2794 551009257 551009933 0.000000e+00 1170.0
10 TraesCS1D01G313700 chr1B 91.604 536 23 5 1013 1548 551008282 551008795 0.000000e+00 721.0
11 TraesCS1D01G313700 chr1B 92.405 316 20 2 1622 1933 551008944 551009259 7.970000e-122 448.0
12 TraesCS1D01G313700 chr1B 85.610 410 45 9 11 418 550992181 550992578 6.250000e-113 418.0
13 TraesCS1D01G313700 chrUn 88.337 523 36 10 1039 1548 446351496 446352006 4.470000e-169 604.0
14 TraesCS1D01G313700 chrUn 92.857 294 20 1 1640 1933 446352048 446352340 3.730000e-115 425.0
15 TraesCS1D01G313700 chrUn 96.739 92 3 0 1558 1649 104668892 104668801 1.950000e-33 154.0
16 TraesCS1D01G313700 chrUn 90.244 41 4 0 439 479 147150071 147150031 2.000000e-03 54.7
17 TraesCS1D01G313700 chrUn 90.244 41 4 0 439 479 147231865 147231825 2.000000e-03 54.7
18 TraesCS1D01G313700 chrUn 90.244 41 4 0 439 479 147301344 147301304 2.000000e-03 54.7
19 TraesCS1D01G313700 chr7A 92.806 139 6 3 675 813 17417367 17417233 8.860000e-47 198.0
20 TraesCS1D01G313700 chr6D 96.667 120 3 1 677 796 429436345 429436227 8.860000e-47 198.0
21 TraesCS1D01G313700 chr6D 89.744 117 11 1 1541 1656 387886091 387885975 9.050000e-32 148.0
22 TraesCS1D01G313700 chr6D 97.222 36 1 0 439 474 31762058 31762093 1.210000e-05 62.1
23 TraesCS1D01G313700 chr2D 95.200 125 5 1 675 799 95519661 95519538 3.190000e-46 196.0
24 TraesCS1D01G313700 chr6B 95.161 124 5 1 674 797 128924891 128924769 1.150000e-45 195.0
25 TraesCS1D01G313700 chr6B 94.444 126 5 2 670 795 130306169 130306046 4.120000e-45 193.0
26 TraesCS1D01G313700 chr6B 90.152 132 11 2 665 795 27078101 27077971 1.930000e-38 171.0
27 TraesCS1D01G313700 chr5B 93.130 131 7 2 675 804 403545715 403545844 1.480000e-44 191.0
28 TraesCS1D01G313700 chr5B 88.793 116 11 2 1549 1663 457395874 457395760 1.510000e-29 141.0
29 TraesCS1D01G313700 chr6A 89.116 147 11 3 678 822 149935391 149935248 1.150000e-40 178.0
30 TraesCS1D01G313700 chr2B 88.966 145 14 2 651 795 767419914 767419772 1.150000e-40 178.0
31 TraesCS1D01G313700 chr7D 97.849 93 2 0 1553 1645 510397847 510397755 1.160000e-35 161.0
32 TraesCS1D01G313700 chr7D 97.826 92 2 0 1554 1645 22964253 22964344 4.180000e-35 159.0
33 TraesCS1D01G313700 chr7D 96.703 91 3 0 1554 1644 426558895 426558985 7.000000e-33 152.0
34 TraesCS1D01G313700 chr5D 96.703 91 3 0 1555 1645 545227875 545227785 7.000000e-33 152.0
35 TraesCS1D01G313700 chr4D 93.939 99 6 0 1544 1642 455628569 455628471 2.520000e-32 150.0
36 TraesCS1D01G313700 chr4B 94.792 96 5 0 1558 1653 106975942 106975847 2.520000e-32 150.0
37 TraesCS1D01G313700 chr5A 97.222 36 1 0 444 479 596031934 596031899 1.210000e-05 62.1
38 TraesCS1D01G313700 chr3A 89.362 47 5 0 435 481 711493999 711493953 4.360000e-05 60.2
39 TraesCS1D01G313700 chr7B 90.244 41 4 0 439 479 670996433 670996393 2.000000e-03 54.7
40 TraesCS1D01G313700 chr7B 90.244 41 4 0 439 479 671061353 671061313 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G313700 chr1D 409045496 409049538 4042 False 7467.000 7467 100.00000 1 4043 1 chr1D.!!$F3 4042
1 TraesCS1D01G313700 chr1A 505266913 505271377 4464 False 1204.225 2355 92.11225 793 4043 4 chr1A.!!$F2 3250
2 TraesCS1D01G313700 chr1A 505254498 505255057 559 False 625.000 625 87.23400 1 548 1 chr1A.!!$F1 547
3 TraesCS1D01G313700 chr1B 551008282 551011444 3162 False 1145.750 2244 93.90375 1013 4043 4 chr1B.!!$F2 3030
4 TraesCS1D01G313700 chrUn 446351496 446352340 844 False 514.500 604 90.59700 1039 1933 2 chrUn.!!$F1 894

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
701 731 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.9 44.66 4.18 F
927 2034 0.106769 TGTTCCTGCTCCTGCACAAA 60.107 50.000 0.00 0.0 45.31 2.83 F
1754 3039 0.255890 ACATCACCTACCATGGCACC 59.744 55.000 13.04 0.0 0.00 5.01 F
1951 3242 1.068055 TCTCGTGTTTCTAGCGGAACC 60.068 52.381 0.00 0.0 33.13 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1625 2782 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.0 0.00 4.00 R
1933 3224 0.963962 AGGTTCCGCTAGAAACACGA 59.036 50.000 0.00 0.0 45.37 4.35 R
2882 4411 1.136110 TGACAAAGAGCTCACGTCACA 59.864 47.619 21.87 10.7 31.92 3.58 R
3934 5505 1.176619 TGTCATGACGAGGTCGGTGT 61.177 55.000 20.54 0.0 44.95 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 6.519679 ACTCCATGTGTACGACTTGTATTA 57.480 37.500 0.00 0.00 35.02 0.98
81 82 6.364701 TGTATTAGTGCCAGCAATCCTAAAT 58.635 36.000 0.00 0.00 0.00 1.40
84 85 7.896383 ATTAGTGCCAGCAATCCTAAATAAA 57.104 32.000 0.00 0.00 0.00 1.40
87 88 7.516198 AGTGCCAGCAATCCTAAATAAATAG 57.484 36.000 0.00 0.00 0.00 1.73
88 89 7.290061 AGTGCCAGCAATCCTAAATAAATAGA 58.710 34.615 0.00 0.00 0.00 1.98
89 90 7.446625 AGTGCCAGCAATCCTAAATAAATAGAG 59.553 37.037 0.00 0.00 0.00 2.43
91 92 7.445402 TGCCAGCAATCCTAAATAAATAGAGTC 59.555 37.037 0.00 0.00 0.00 3.36
92 93 7.663493 GCCAGCAATCCTAAATAAATAGAGTCT 59.337 37.037 0.00 0.00 0.00 3.24
93 94 8.997323 CCAGCAATCCTAAATAAATAGAGTCTG 58.003 37.037 1.86 0.00 0.00 3.51
118 119 9.085645 TGTTTTCAGATAACTAGAAGTCAGGTA 57.914 33.333 0.00 0.00 0.00 3.08
119 120 9.356433 GTTTTCAGATAACTAGAAGTCAGGTAC 57.644 37.037 0.00 0.00 0.00 3.34
177 178 6.476053 CCTCCGTTAATTAGAAGTCTAGTTGC 59.524 42.308 6.40 0.45 31.95 4.17
218 219 4.635765 TGTTCAACACAGTTCCAAGAGAAG 59.364 41.667 0.00 0.00 34.29 2.85
223 224 3.199946 ACACAGTTCCAAGAGAAGAACCA 59.800 43.478 0.00 0.00 42.73 3.67
325 326 9.783256 CCTATAGTTTTGAAATTTACGAAAGGG 57.217 33.333 0.00 0.00 0.00 3.95
338 339 6.856135 TTACGAAAGGGAAGAAGAGAAAAC 57.144 37.500 0.00 0.00 0.00 2.43
350 351 6.874288 AGAAGAGAAAACAGGTTGATGAAG 57.126 37.500 0.00 0.00 0.00 3.02
367 368 1.197721 GAAGGTGGTTTGCATGTCTCG 59.802 52.381 0.00 0.00 0.00 4.04
373 374 3.293872 TTTGCATGTCTCGCACGCG 62.294 57.895 3.53 3.53 39.46 6.01
392 393 3.619729 GCGACTAGTGAGTGTATGTAGC 58.380 50.000 0.00 0.00 35.45 3.58
418 419 3.694072 CACCCACTTTCACAAGAAGTTGA 59.306 43.478 0.00 0.00 37.10 3.18
437 467 7.118422 AGTTGACATTAAAGAGCGTTTAGAC 57.882 36.000 0.00 0.00 0.00 2.59
440 470 5.637810 TGACATTAAAGAGCGTTTAGACCAG 59.362 40.000 0.00 0.00 0.00 4.00
441 471 5.548406 ACATTAAAGAGCGTTTAGACCAGT 58.452 37.500 0.00 0.00 0.00 4.00
442 472 5.408604 ACATTAAAGAGCGTTTAGACCAGTG 59.591 40.000 0.00 0.00 0.00 3.66
443 473 3.746045 AAAGAGCGTTTAGACCAGTGA 57.254 42.857 0.00 0.00 0.00 3.41
444 474 3.963428 AAGAGCGTTTAGACCAGTGAT 57.037 42.857 0.00 0.00 0.00 3.06
445 475 3.512033 AGAGCGTTTAGACCAGTGATC 57.488 47.619 0.00 0.00 0.00 2.92
446 476 3.093057 AGAGCGTTTAGACCAGTGATCT 58.907 45.455 0.00 0.00 0.00 2.75
447 477 4.270834 AGAGCGTTTAGACCAGTGATCTA 58.729 43.478 0.00 0.00 0.00 1.98
448 478 4.705507 AGAGCGTTTAGACCAGTGATCTAA 59.294 41.667 2.53 2.53 36.98 2.10
449 479 5.185249 AGAGCGTTTAGACCAGTGATCTAAA 59.815 40.000 14.69 14.69 43.24 1.85
453 483 5.401531 TTTAGACCAGTGATCTAAACGCT 57.598 39.130 14.69 0.00 41.52 5.07
454 484 3.963428 AGACCAGTGATCTAAACGCTT 57.037 42.857 0.00 0.00 0.00 4.68
455 485 4.273148 AGACCAGTGATCTAAACGCTTT 57.727 40.909 0.00 0.00 0.00 3.51
469 499 9.916397 ATCTAAACGCTTTTATATTTCTTCACG 57.084 29.630 0.00 0.00 0.00 4.35
470 500 8.385111 TCTAAACGCTTTTATATTTCTTCACGG 58.615 33.333 0.00 0.00 0.00 4.94
474 504 5.277345 CGCTTTTATATTTCTTCACGGAGGG 60.277 44.000 0.00 0.00 0.00 4.30
475 505 5.008712 GCTTTTATATTTCTTCACGGAGGGG 59.991 44.000 0.00 0.00 0.00 4.79
496 526 5.305585 GGGGTACATCACACATAATGTAGG 58.694 45.833 0.00 0.00 40.64 3.18
510 540 9.897744 CACATAATGTAGGTATTTGCCTTTATG 57.102 33.333 12.37 12.37 39.90 1.90
520 550 7.446625 AGGTATTTGCCTTTATGCTCTAATCAG 59.553 37.037 0.00 0.00 34.71 2.90
525 555 6.283694 TGCCTTTATGCTCTAATCAGTACTG 58.716 40.000 17.17 17.17 0.00 2.74
564 594 3.059352 ACATAACTGTGGTGAAGGAGC 57.941 47.619 0.42 0.00 33.22 4.70
565 595 2.371841 ACATAACTGTGGTGAAGGAGCA 59.628 45.455 0.00 0.00 33.22 4.26
566 596 3.181445 ACATAACTGTGGTGAAGGAGCAA 60.181 43.478 0.00 0.00 33.22 3.91
567 597 1.680338 AACTGTGGTGAAGGAGCAAC 58.320 50.000 0.00 0.00 32.64 4.17
568 598 0.546122 ACTGTGGTGAAGGAGCAACA 59.454 50.000 0.00 0.00 32.64 3.33
569 599 1.143684 ACTGTGGTGAAGGAGCAACAT 59.856 47.619 0.00 0.00 37.86 2.71
570 600 1.808945 CTGTGGTGAAGGAGCAACATC 59.191 52.381 0.00 0.00 37.86 3.06
571 601 0.798776 GTGGTGAAGGAGCAACATCG 59.201 55.000 0.00 0.00 37.86 3.84
572 602 0.396435 TGGTGAAGGAGCAACATCGT 59.604 50.000 0.00 0.00 28.80 3.73
573 603 0.798776 GGTGAAGGAGCAACATCGTG 59.201 55.000 0.00 0.00 0.00 4.35
574 604 0.798776 GTGAAGGAGCAACATCGTGG 59.201 55.000 0.00 0.00 0.00 4.94
575 605 0.396435 TGAAGGAGCAACATCGTGGT 59.604 50.000 0.00 0.00 0.00 4.16
576 606 1.079503 GAAGGAGCAACATCGTGGTC 58.920 55.000 0.00 0.00 43.73 4.02
577 607 0.687354 AAGGAGCAACATCGTGGTCT 59.313 50.000 4.58 0.00 43.89 3.85
578 608 1.557099 AGGAGCAACATCGTGGTCTA 58.443 50.000 4.58 0.00 43.89 2.59
579 609 1.899814 AGGAGCAACATCGTGGTCTAA 59.100 47.619 4.58 0.00 43.89 2.10
580 610 2.501723 AGGAGCAACATCGTGGTCTAAT 59.498 45.455 4.58 0.00 43.89 1.73
581 611 3.055094 AGGAGCAACATCGTGGTCTAATT 60.055 43.478 4.58 0.00 43.89 1.40
582 612 3.689649 GGAGCAACATCGTGGTCTAATTT 59.310 43.478 4.58 0.00 43.89 1.82
583 613 4.873827 GGAGCAACATCGTGGTCTAATTTA 59.126 41.667 4.58 0.00 43.89 1.40
584 614 5.353123 GGAGCAACATCGTGGTCTAATTTAA 59.647 40.000 4.58 0.00 43.89 1.52
585 615 6.128117 GGAGCAACATCGTGGTCTAATTTAAA 60.128 38.462 4.58 0.00 43.89 1.52
586 616 7.391148 AGCAACATCGTGGTCTAATTTAAAT 57.609 32.000 0.00 0.00 0.00 1.40
587 617 7.826690 AGCAACATCGTGGTCTAATTTAAATT 58.173 30.769 17.18 17.18 0.00 1.82
588 618 7.968405 AGCAACATCGTGGTCTAATTTAAATTC 59.032 33.333 16.56 3.83 0.00 2.17
589 619 7.044966 GCAACATCGTGGTCTAATTTAAATTCG 60.045 37.037 16.56 11.00 0.00 3.34
590 620 7.837202 ACATCGTGGTCTAATTTAAATTCGA 57.163 32.000 16.56 16.95 0.00 3.71
591 621 8.259049 ACATCGTGGTCTAATTTAAATTCGAA 57.741 30.769 16.56 0.00 0.00 3.71
592 622 8.889717 ACATCGTGGTCTAATTTAAATTCGAAT 58.110 29.630 16.56 4.39 0.00 3.34
593 623 9.158364 CATCGTGGTCTAATTTAAATTCGAATG 57.842 33.333 16.56 11.58 0.00 2.67
594 624 8.259049 TCGTGGTCTAATTTAAATTCGAATGT 57.741 30.769 16.56 8.99 0.00 2.71
595 625 8.172484 TCGTGGTCTAATTTAAATTCGAATGTG 58.828 33.333 16.56 7.81 0.00 3.21
596 626 7.428183 CGTGGTCTAATTTAAATTCGAATGTGG 59.572 37.037 16.56 3.04 0.00 4.17
597 627 8.455682 GTGGTCTAATTTAAATTCGAATGTGGA 58.544 33.333 16.56 0.00 0.00 4.02
598 628 9.015367 TGGTCTAATTTAAATTCGAATGTGGAA 57.985 29.630 16.56 6.43 0.00 3.53
599 629 9.503427 GGTCTAATTTAAATTCGAATGTGGAAG 57.497 33.333 16.56 5.39 0.00 3.46
604 634 9.626045 AATTTAAATTCGAATGTGGAAGAGAAC 57.374 29.630 12.25 0.00 0.00 3.01
605 635 4.928661 AATTCGAATGTGGAAGAGAACG 57.071 40.909 12.25 0.00 0.00 3.95
606 636 2.363788 TCGAATGTGGAAGAGAACGG 57.636 50.000 0.00 0.00 0.00 4.44
607 637 1.616865 TCGAATGTGGAAGAGAACGGT 59.383 47.619 0.00 0.00 0.00 4.83
608 638 1.726791 CGAATGTGGAAGAGAACGGTG 59.273 52.381 0.00 0.00 0.00 4.94
609 639 2.767505 GAATGTGGAAGAGAACGGTGT 58.232 47.619 0.00 0.00 0.00 4.16
610 640 2.930826 ATGTGGAAGAGAACGGTGTT 57.069 45.000 0.00 0.00 0.00 3.32
611 641 2.234300 TGTGGAAGAGAACGGTGTTC 57.766 50.000 1.49 1.49 0.00 3.18
612 642 1.760613 TGTGGAAGAGAACGGTGTTCT 59.239 47.619 11.71 11.71 0.00 3.01
613 643 2.169769 TGTGGAAGAGAACGGTGTTCTT 59.830 45.455 12.97 7.00 34.06 2.52
614 644 3.203716 GTGGAAGAGAACGGTGTTCTTT 58.796 45.455 12.97 5.39 31.67 2.52
615 645 3.002348 GTGGAAGAGAACGGTGTTCTTTG 59.998 47.826 12.97 0.00 31.67 2.77
616 646 3.118555 TGGAAGAGAACGGTGTTCTTTGA 60.119 43.478 12.97 0.00 31.67 2.69
617 647 4.065789 GGAAGAGAACGGTGTTCTTTGAT 58.934 43.478 12.97 1.52 31.67 2.57
618 648 4.152580 GGAAGAGAACGGTGTTCTTTGATC 59.847 45.833 12.97 9.08 31.67 2.92
619 649 3.665190 AGAGAACGGTGTTCTTTGATCC 58.335 45.455 12.97 0.63 0.00 3.36
620 650 3.071023 AGAGAACGGTGTTCTTTGATCCA 59.929 43.478 12.97 0.00 0.00 3.41
621 651 3.813166 GAGAACGGTGTTCTTTGATCCAA 59.187 43.478 12.97 0.00 0.00 3.53
622 652 3.815401 AGAACGGTGTTCTTTGATCCAAG 59.185 43.478 6.38 0.00 0.00 3.61
623 653 3.208747 ACGGTGTTCTTTGATCCAAGT 57.791 42.857 6.45 0.00 0.00 3.16
624 654 3.551846 ACGGTGTTCTTTGATCCAAGTT 58.448 40.909 6.45 0.00 0.00 2.66
625 655 3.564225 ACGGTGTTCTTTGATCCAAGTTC 59.436 43.478 6.45 2.66 0.00 3.01
626 656 3.058224 CGGTGTTCTTTGATCCAAGTTCC 60.058 47.826 6.45 4.85 0.00 3.62
627 657 4.145052 GGTGTTCTTTGATCCAAGTTCCT 58.855 43.478 6.45 0.00 0.00 3.36
628 658 4.022849 GGTGTTCTTTGATCCAAGTTCCTG 60.023 45.833 6.45 0.00 0.00 3.86
629 659 4.580580 GTGTTCTTTGATCCAAGTTCCTGT 59.419 41.667 6.45 0.00 0.00 4.00
630 660 4.580167 TGTTCTTTGATCCAAGTTCCTGTG 59.420 41.667 6.45 0.00 0.00 3.66
631 661 3.754965 TCTTTGATCCAAGTTCCTGTGG 58.245 45.455 6.45 0.00 36.13 4.17
632 662 3.138283 TCTTTGATCCAAGTTCCTGTGGT 59.862 43.478 6.45 0.00 36.23 4.16
633 663 3.593442 TTGATCCAAGTTCCTGTGGTT 57.407 42.857 0.00 0.00 36.23 3.67
634 664 3.593442 TGATCCAAGTTCCTGTGGTTT 57.407 42.857 0.00 0.00 36.23 3.27
635 665 3.486383 TGATCCAAGTTCCTGTGGTTTC 58.514 45.455 0.00 0.00 36.23 2.78
636 666 2.358322 TCCAAGTTCCTGTGGTTTCC 57.642 50.000 0.00 0.00 36.23 3.13
637 667 0.951558 CCAAGTTCCTGTGGTTTCCG 59.048 55.000 0.00 0.00 0.00 4.30
638 668 0.951558 CAAGTTCCTGTGGTTTCCGG 59.048 55.000 0.00 0.00 0.00 5.14
639 669 0.841289 AAGTTCCTGTGGTTTCCGGA 59.159 50.000 0.00 0.00 0.00 5.14
640 670 1.064825 AGTTCCTGTGGTTTCCGGAT 58.935 50.000 4.15 0.00 0.00 4.18
641 671 1.423921 AGTTCCTGTGGTTTCCGGATT 59.576 47.619 4.15 0.00 0.00 3.01
642 672 2.158519 AGTTCCTGTGGTTTCCGGATTT 60.159 45.455 4.15 0.00 0.00 2.17
643 673 2.626266 GTTCCTGTGGTTTCCGGATTTT 59.374 45.455 4.15 0.00 0.00 1.82
644 674 2.510613 TCCTGTGGTTTCCGGATTTTC 58.489 47.619 4.15 0.00 0.00 2.29
645 675 2.158593 TCCTGTGGTTTCCGGATTTTCA 60.159 45.455 4.15 0.00 0.00 2.69
646 676 2.030274 CCTGTGGTTTCCGGATTTTCAC 60.030 50.000 4.15 12.41 0.00 3.18
647 677 2.621055 CTGTGGTTTCCGGATTTTCACA 59.379 45.455 21.07 21.07 33.45 3.58
648 678 2.621055 TGTGGTTTCCGGATTTTCACAG 59.379 45.455 19.54 0.00 31.29 3.66
649 679 2.882137 GTGGTTTCCGGATTTTCACAGA 59.118 45.455 4.15 0.00 0.00 3.41
650 680 3.316868 GTGGTTTCCGGATTTTCACAGAA 59.683 43.478 4.15 0.00 0.00 3.02
651 681 3.954904 TGGTTTCCGGATTTTCACAGAAA 59.045 39.130 4.15 0.00 0.00 2.52
652 682 4.586841 TGGTTTCCGGATTTTCACAGAAAT 59.413 37.500 4.15 0.00 32.16 2.17
653 683 5.069781 TGGTTTCCGGATTTTCACAGAAATT 59.930 36.000 4.15 0.00 29.75 1.82
654 684 5.989168 GGTTTCCGGATTTTCACAGAAATTT 59.011 36.000 4.15 0.00 29.75 1.82
655 685 6.481976 GGTTTCCGGATTTTCACAGAAATTTT 59.518 34.615 4.15 0.00 29.75 1.82
656 686 7.344441 GTTTCCGGATTTTCACAGAAATTTTG 58.656 34.615 4.15 0.00 29.75 2.44
657 687 6.155475 TCCGGATTTTCACAGAAATTTTGT 57.845 33.333 0.00 0.00 29.75 2.83
658 688 7.278461 TCCGGATTTTCACAGAAATTTTGTA 57.722 32.000 0.00 0.00 29.75 2.41
659 689 7.367285 TCCGGATTTTCACAGAAATTTTGTAG 58.633 34.615 0.00 0.00 29.75 2.74
660 690 6.586082 CCGGATTTTCACAGAAATTTTGTAGG 59.414 38.462 0.00 0.00 29.75 3.18
661 691 7.367285 CGGATTTTCACAGAAATTTTGTAGGA 58.633 34.615 0.00 0.00 29.75 2.94
662 692 8.028938 CGGATTTTCACAGAAATTTTGTAGGAT 58.971 33.333 0.00 0.00 29.75 3.24
663 693 9.710900 GGATTTTCACAGAAATTTTGTAGGATT 57.289 29.630 0.00 0.00 29.75 3.01
684 714 8.913335 AGGATTATAACCATAGTAGTACTCCCT 58.087 37.037 5.96 0.00 0.00 4.20
685 715 9.187996 GGATTATAACCATAGTAGTACTCCCTC 57.812 40.741 5.96 0.00 0.00 4.30
686 716 9.187996 GATTATAACCATAGTAGTACTCCCTCC 57.812 40.741 5.96 0.00 0.00 4.30
687 717 3.505480 ACCATAGTAGTACTCCCTCCG 57.495 52.381 5.96 0.00 0.00 4.63
688 718 2.782341 ACCATAGTAGTACTCCCTCCGT 59.218 50.000 5.96 0.00 0.00 4.69
689 719 3.181446 ACCATAGTAGTACTCCCTCCGTC 60.181 52.174 5.96 0.00 0.00 4.79
690 720 3.410508 CATAGTAGTACTCCCTCCGTCC 58.589 54.545 5.96 0.00 0.00 4.79
691 721 0.179936 AGTAGTACTCCCTCCGTCCG 59.820 60.000 0.00 0.00 0.00 4.79
692 722 0.817229 GTAGTACTCCCTCCGTCCGG 60.817 65.000 0.00 0.00 0.00 5.14
693 723 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
694 724 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
695 725 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
696 726 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
697 727 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
698 728 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
699 729 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
700 730 0.388294 CCCTCCGTCCGGAAATACTC 59.612 60.000 5.23 0.00 44.66 2.59
701 731 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18
702 732 0.737219 CTCCGTCCGGAAATACTCGT 59.263 55.000 5.23 0.00 44.66 4.18
703 733 0.734889 TCCGTCCGGAAATACTCGTC 59.265 55.000 5.23 0.00 42.05 4.20
704 734 0.590732 CCGTCCGGAAATACTCGTCG 60.591 60.000 5.23 1.25 37.50 5.12
705 735 0.590732 CGTCCGGAAATACTCGTCGG 60.591 60.000 5.23 0.00 41.80 4.79
706 736 0.734889 GTCCGGAAATACTCGTCGGA 59.265 55.000 5.23 0.00 46.06 4.55
707 737 1.019673 TCCGGAAATACTCGTCGGAG 58.980 55.000 0.00 0.00 43.84 4.63
708 738 0.030369 CCGGAAATACTCGTCGGAGG 59.970 60.000 0.00 0.00 44.93 4.30
709 739 1.019673 CGGAAATACTCGTCGGAGGA 58.980 55.000 0.00 0.00 44.93 3.71
710 740 1.402968 CGGAAATACTCGTCGGAGGAA 59.597 52.381 1.73 0.00 44.93 3.36
711 741 2.034305 CGGAAATACTCGTCGGAGGAAT 59.966 50.000 1.73 0.00 44.93 3.01
712 742 3.381949 GGAAATACTCGTCGGAGGAATG 58.618 50.000 1.73 0.00 44.93 2.67
713 743 3.067742 GGAAATACTCGTCGGAGGAATGA 59.932 47.826 1.73 0.00 44.93 2.57
714 744 4.441079 GGAAATACTCGTCGGAGGAATGAA 60.441 45.833 1.73 0.00 44.93 2.57
715 745 4.939052 AATACTCGTCGGAGGAATGAAT 57.061 40.909 1.73 0.00 44.93 2.57
716 746 2.586258 ACTCGTCGGAGGAATGAATG 57.414 50.000 1.73 0.00 44.93 2.67
717 747 1.825474 ACTCGTCGGAGGAATGAATGT 59.175 47.619 1.73 0.00 44.93 2.71
718 748 3.021695 ACTCGTCGGAGGAATGAATGTA 58.978 45.455 1.73 0.00 44.93 2.29
719 749 3.637229 ACTCGTCGGAGGAATGAATGTAT 59.363 43.478 1.73 0.00 44.93 2.29
720 750 4.230657 CTCGTCGGAGGAATGAATGTATC 58.769 47.826 1.73 0.00 36.61 2.24
721 751 3.889538 TCGTCGGAGGAATGAATGTATCT 59.110 43.478 0.00 0.00 0.00 1.98
722 752 5.067954 TCGTCGGAGGAATGAATGTATCTA 58.932 41.667 0.00 0.00 0.00 1.98
723 753 5.181433 TCGTCGGAGGAATGAATGTATCTAG 59.819 44.000 0.00 0.00 0.00 2.43
724 754 5.181433 CGTCGGAGGAATGAATGTATCTAGA 59.819 44.000 0.00 0.00 0.00 2.43
725 755 6.383415 GTCGGAGGAATGAATGTATCTAGAC 58.617 44.000 0.00 0.00 0.00 2.59
726 756 6.016192 GTCGGAGGAATGAATGTATCTAGACA 60.016 42.308 0.00 0.00 0.00 3.41
727 757 6.721668 TCGGAGGAATGAATGTATCTAGACAT 59.278 38.462 0.00 0.00 41.92 3.06
728 758 7.888546 TCGGAGGAATGAATGTATCTAGACATA 59.111 37.037 0.00 0.00 39.16 2.29
729 759 8.690884 CGGAGGAATGAATGTATCTAGACATAT 58.309 37.037 0.00 0.00 39.16 1.78
767 797 7.760131 ACATTCATTTTTATGCATTTCTCCG 57.240 32.000 3.54 0.00 0.00 4.63
768 798 7.546358 ACATTCATTTTTATGCATTTCTCCGA 58.454 30.769 3.54 0.00 0.00 4.55
769 799 7.489113 ACATTCATTTTTATGCATTTCTCCGAC 59.511 33.333 3.54 0.00 0.00 4.79
770 800 6.507958 TCATTTTTATGCATTTCTCCGACA 57.492 33.333 3.54 0.00 0.00 4.35
771 801 6.918626 TCATTTTTATGCATTTCTCCGACAA 58.081 32.000 3.54 0.00 0.00 3.18
772 802 7.028962 TCATTTTTATGCATTTCTCCGACAAG 58.971 34.615 3.54 0.00 0.00 3.16
773 803 5.957842 TTTTATGCATTTCTCCGACAAGT 57.042 34.783 3.54 0.00 0.00 3.16
774 804 7.441890 TTTTTATGCATTTCTCCGACAAGTA 57.558 32.000 3.54 0.00 0.00 2.24
775 805 7.624360 TTTTATGCATTTCTCCGACAAGTAT 57.376 32.000 3.54 0.00 0.00 2.12
776 806 7.624360 TTTATGCATTTCTCCGACAAGTATT 57.376 32.000 3.54 0.00 0.00 1.89
777 807 7.624360 TTATGCATTTCTCCGACAAGTATTT 57.376 32.000 3.54 0.00 0.00 1.40
778 808 5.545658 TGCATTTCTCCGACAAGTATTTC 57.454 39.130 0.00 0.00 0.00 2.17
779 809 4.394920 TGCATTTCTCCGACAAGTATTTCC 59.605 41.667 0.00 0.00 0.00 3.13
780 810 4.494199 GCATTTCTCCGACAAGTATTTCCG 60.494 45.833 0.00 0.00 0.00 4.30
781 811 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
782 812 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
783 813 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
784 814 1.894466 TCCGACAAGTATTTCCGGACA 59.106 47.619 1.83 0.00 43.47 4.02
785 815 2.094390 TCCGACAAGTATTTCCGGACAG 60.094 50.000 1.83 0.00 43.47 3.51
786 816 2.094390 CCGACAAGTATTTCCGGACAGA 60.094 50.000 1.83 0.00 42.49 3.41
787 817 3.179830 CGACAAGTATTTCCGGACAGAG 58.820 50.000 1.83 0.00 0.00 3.35
788 818 3.522553 GACAAGTATTTCCGGACAGAGG 58.477 50.000 1.83 0.00 0.00 3.69
789 819 2.236395 ACAAGTATTTCCGGACAGAGGG 59.764 50.000 1.83 0.00 0.00 4.30
790 820 2.500098 CAAGTATTTCCGGACAGAGGGA 59.500 50.000 1.83 0.00 0.00 4.20
791 821 2.829023 AGTATTTCCGGACAGAGGGAA 58.171 47.619 1.83 0.00 40.44 3.97
800 830 3.939592 CCGGACAGAGGGAAGTATTTTTC 59.060 47.826 0.00 0.00 0.00 2.29
808 838 7.333672 ACAGAGGGAAGTATTTTTCGTATGTTC 59.666 37.037 0.00 0.00 0.00 3.18
810 840 6.478129 AGGGAAGTATTTTTCGTATGTTCCA 58.522 36.000 0.00 0.00 34.99 3.53
825 855 6.577055 CGTATGTTCCATGTGTTTTGTACAAG 59.423 38.462 8.56 0.00 38.80 3.16
861 895 3.721087 TCCTGGAAATCAAAGAGGTCC 57.279 47.619 0.00 0.00 0.00 4.46
862 896 3.260205 TCCTGGAAATCAAAGAGGTCCT 58.740 45.455 0.00 0.00 0.00 3.85
863 897 3.009473 TCCTGGAAATCAAAGAGGTCCTG 59.991 47.826 0.00 0.00 0.00 3.86
865 899 4.507335 CCTGGAAATCAAAGAGGTCCTGAA 60.507 45.833 0.00 0.00 31.02 3.02
873 1977 8.712228 AATCAAAGAGGTCCTGAAGTTAAAAT 57.288 30.769 0.00 0.00 0.00 1.82
875 1979 9.807921 ATCAAAGAGGTCCTGAAGTTAAAATAA 57.192 29.630 0.00 0.00 0.00 1.40
879 1983 9.642343 AAGAGGTCCTGAAGTTAAAATAAAACT 57.358 29.630 0.00 0.00 38.82 2.66
900 2004 9.462606 AAAACTCCTCTTTTTCTGAACTTTCTA 57.537 29.630 0.00 0.00 0.00 2.10
902 2006 8.669946 ACTCCTCTTTTTCTGAACTTTCTAAG 57.330 34.615 0.00 0.00 0.00 2.18
903 2007 7.227711 ACTCCTCTTTTTCTGAACTTTCTAAGC 59.772 37.037 0.00 0.00 0.00 3.09
904 2008 7.283329 TCCTCTTTTTCTGAACTTTCTAAGCT 58.717 34.615 0.00 0.00 0.00 3.74
906 2013 8.499967 CCTCTTTTTCTGAACTTTCTAAGCTAC 58.500 37.037 0.00 0.00 0.00 3.58
909 2016 6.764877 TTTCTGAACTTTCTAAGCTACGTG 57.235 37.500 0.00 0.00 0.00 4.49
924 2031 2.320587 CGTGTTCCTGCTCCTGCAC 61.321 63.158 0.00 0.00 45.31 4.57
926 2033 0.819259 GTGTTCCTGCTCCTGCACAA 60.819 55.000 0.00 0.00 45.31 3.33
927 2034 0.106769 TGTTCCTGCTCCTGCACAAA 60.107 50.000 0.00 0.00 45.31 2.83
928 2035 1.251251 GTTCCTGCTCCTGCACAAAT 58.749 50.000 0.00 0.00 45.31 2.32
929 2036 2.224744 TGTTCCTGCTCCTGCACAAATA 60.225 45.455 0.00 0.00 45.31 1.40
930 2037 2.113860 TCCTGCTCCTGCACAAATAC 57.886 50.000 0.00 0.00 45.31 1.89
931 2038 1.350684 TCCTGCTCCTGCACAAATACA 59.649 47.619 0.00 0.00 45.31 2.29
932 2039 2.161855 CCTGCTCCTGCACAAATACAA 58.838 47.619 0.00 0.00 45.31 2.41
934 2041 3.568538 CTGCTCCTGCACAAATACAAAC 58.431 45.455 0.00 0.00 45.31 2.93
936 2043 2.584791 CTCCTGCACAAATACAAACGC 58.415 47.619 0.00 0.00 0.00 4.84
937 2044 1.950216 TCCTGCACAAATACAAACGCA 59.050 42.857 0.00 0.00 0.00 5.24
945 2067 4.208253 CACAAATACAAACGCAAAGGGTTC 59.792 41.667 0.00 0.00 37.72 3.62
962 2084 3.771577 GTTCCTCTTCTCTGAACCCAA 57.228 47.619 0.00 0.00 33.85 4.12
995 2117 4.093952 CGGTCGCAGGCAAAGCAG 62.094 66.667 0.00 0.00 0.00 4.24
996 2118 4.410743 GGTCGCAGGCAAAGCAGC 62.411 66.667 0.00 0.00 0.00 5.25
997 2119 3.663176 GTCGCAGGCAAAGCAGCA 61.663 61.111 0.00 0.00 35.83 4.41
998 2120 2.906388 TCGCAGGCAAAGCAGCAA 60.906 55.556 0.00 0.00 35.83 3.91
999 2121 2.027897 CGCAGGCAAAGCAGCAAA 59.972 55.556 0.00 0.00 35.83 3.68
1000 2122 2.019951 CGCAGGCAAAGCAGCAAAG 61.020 57.895 0.00 0.00 35.83 2.77
1001 2123 2.315386 GCAGGCAAAGCAGCAAAGC 61.315 57.895 0.00 0.00 35.83 3.51
1002 2124 1.666872 CAGGCAAAGCAGCAAAGCC 60.667 57.895 12.65 12.65 45.54 4.35
1003 2125 2.735857 GGCAAAGCAGCAAAGCCG 60.736 61.111 6.29 0.00 35.42 5.52
1004 2126 2.028043 GCAAAGCAGCAAAGCCGT 59.972 55.556 0.00 0.00 34.23 5.68
1005 2127 1.285641 GCAAAGCAGCAAAGCCGTA 59.714 52.632 0.00 0.00 34.23 4.02
1006 2128 0.730494 GCAAAGCAGCAAAGCCGTAG 60.730 55.000 0.00 0.00 34.23 3.51
1007 2129 0.730494 CAAAGCAGCAAAGCCGTAGC 60.730 55.000 0.00 0.00 40.32 3.58
1008 2130 2.187599 AAAGCAGCAAAGCCGTAGCG 62.188 55.000 0.00 0.00 46.67 4.26
1144 2272 2.756283 AACTCCTCCTCCTCGCCG 60.756 66.667 0.00 0.00 0.00 6.46
1384 2518 1.954927 GGTATTGCCCCTCTTCTTCG 58.045 55.000 0.00 0.00 0.00 3.79
1435 2591 3.326588 TGCTCCTGTGCTTCTAGGTTAAA 59.673 43.478 0.00 0.00 35.54 1.52
1436 2592 3.685272 GCTCCTGTGCTTCTAGGTTAAAC 59.315 47.826 0.00 0.00 35.54 2.01
1437 2593 4.802918 GCTCCTGTGCTTCTAGGTTAAACA 60.803 45.833 0.00 0.00 35.54 2.83
1438 2594 5.491982 CTCCTGTGCTTCTAGGTTAAACAT 58.508 41.667 0.00 0.00 35.54 2.71
1439 2595 5.245531 TCCTGTGCTTCTAGGTTAAACATG 58.754 41.667 0.00 0.00 35.54 3.21
1440 2596 5.012664 TCCTGTGCTTCTAGGTTAAACATGA 59.987 40.000 0.00 0.00 35.54 3.07
1441 2597 5.882557 CCTGTGCTTCTAGGTTAAACATGAT 59.117 40.000 0.00 0.00 0.00 2.45
1442 2598 7.047891 CCTGTGCTTCTAGGTTAAACATGATA 58.952 38.462 0.00 0.00 0.00 2.15
1443 2599 7.225538 CCTGTGCTTCTAGGTTAAACATGATAG 59.774 40.741 0.00 0.00 0.00 2.08
1444 2600 6.538742 TGTGCTTCTAGGTTAAACATGATAGC 59.461 38.462 0.00 3.83 0.00 2.97
1445 2601 6.763610 GTGCTTCTAGGTTAAACATGATAGCT 59.236 38.462 0.00 0.00 0.00 3.32
1446 2602 7.926555 GTGCTTCTAGGTTAAACATGATAGCTA 59.073 37.037 0.00 0.00 0.00 3.32
1447 2603 8.144478 TGCTTCTAGGTTAAACATGATAGCTAG 58.856 37.037 0.00 9.77 39.08 3.42
1448 2604 7.600752 GCTTCTAGGTTAAACATGATAGCTAGG 59.399 40.741 18.01 10.29 38.56 3.02
1449 2605 8.548880 TTCTAGGTTAAACATGATAGCTAGGT 57.451 34.615 18.01 0.00 38.56 3.08
1450 2606 8.548880 TCTAGGTTAAACATGATAGCTAGGTT 57.451 34.615 18.01 0.00 38.56 3.50
1451 2607 9.650714 TCTAGGTTAAACATGATAGCTAGGTTA 57.349 33.333 18.01 0.00 38.56 2.85
1471 2627 8.366359 AGGTTAATTGCCTTTGTAAGATTCAT 57.634 30.769 0.00 0.00 31.04 2.57
1472 2628 8.470002 AGGTTAATTGCCTTTGTAAGATTCATC 58.530 33.333 0.00 0.00 31.04 2.92
1473 2629 7.706607 GGTTAATTGCCTTTGTAAGATTCATCC 59.293 37.037 0.00 0.00 0.00 3.51
1474 2630 6.855763 AATTGCCTTTGTAAGATTCATCCA 57.144 33.333 0.00 0.00 0.00 3.41
1518 2675 7.094248 TGTTGCTGTCATAATTCATAGCACTTT 60.094 33.333 0.00 0.00 40.45 2.66
1548 2705 2.127708 AGACAGTGGAGTTTTCCTGGT 58.872 47.619 0.00 0.00 44.36 4.00
1551 2708 3.314693 ACAGTGGAGTTTTCCTGGTCTA 58.685 45.455 0.00 0.00 44.36 2.59
1552 2709 3.325135 ACAGTGGAGTTTTCCTGGTCTAG 59.675 47.826 0.00 0.00 44.36 2.43
1553 2710 3.325135 CAGTGGAGTTTTCCTGGTCTAGT 59.675 47.826 0.00 0.00 44.36 2.57
1554 2711 4.527038 CAGTGGAGTTTTCCTGGTCTAGTA 59.473 45.833 0.00 0.00 44.36 1.82
1555 2712 5.187967 CAGTGGAGTTTTCCTGGTCTAGTAT 59.812 44.000 0.00 0.00 44.36 2.12
1556 2713 5.187967 AGTGGAGTTTTCCTGGTCTAGTATG 59.812 44.000 0.00 0.00 44.36 2.39
1557 2714 5.046520 GTGGAGTTTTCCTGGTCTAGTATGT 60.047 44.000 0.00 0.00 44.36 2.29
1560 2717 6.380560 GGAGTTTTCCTGGTCTAGTATGTACT 59.619 42.308 0.00 0.00 40.58 2.73
1561 2718 7.407393 AGTTTTCCTGGTCTAGTATGTACTC 57.593 40.000 0.00 0.00 37.73 2.59
1562 2719 6.380560 AGTTTTCCTGGTCTAGTATGTACTCC 59.619 42.308 0.00 0.00 37.73 3.85
1564 2721 4.052922 TCCTGGTCTAGTATGTACTCCCT 58.947 47.826 0.00 0.00 37.73 4.20
1565 2722 4.104420 TCCTGGTCTAGTATGTACTCCCTC 59.896 50.000 0.00 0.00 37.73 4.30
1566 2723 4.141228 CCTGGTCTAGTATGTACTCCCTCA 60.141 50.000 0.00 0.00 37.73 3.86
1567 2724 5.050126 TGGTCTAGTATGTACTCCCTCAG 57.950 47.826 0.00 0.00 37.73 3.35
1568 2725 4.477581 TGGTCTAGTATGTACTCCCTCAGT 59.522 45.833 0.00 0.00 37.73 3.41
1569 2726 5.065235 GGTCTAGTATGTACTCCCTCAGTC 58.935 50.000 0.00 0.00 37.73 3.51
1570 2727 5.065235 GTCTAGTATGTACTCCCTCAGTCC 58.935 50.000 0.00 0.00 37.73 3.85
1571 2728 3.315880 AGTATGTACTCCCTCAGTCCC 57.684 52.381 0.00 0.00 36.43 4.46
1572 2729 2.585900 AGTATGTACTCCCTCAGTCCCA 59.414 50.000 0.00 0.00 36.43 4.37
1573 2730 2.877154 ATGTACTCCCTCAGTCCCAT 57.123 50.000 0.00 0.00 36.43 4.00
1574 2731 3.993658 ATGTACTCCCTCAGTCCCATA 57.006 47.619 0.00 0.00 36.43 2.74
1575 2732 3.769189 TGTACTCCCTCAGTCCCATAA 57.231 47.619 0.00 0.00 36.43 1.90
1576 2733 4.280789 TGTACTCCCTCAGTCCCATAAT 57.719 45.455 0.00 0.00 36.43 1.28
1577 2734 5.412617 TGTACTCCCTCAGTCCCATAATA 57.587 43.478 0.00 0.00 36.43 0.98
1578 2735 5.977533 TGTACTCCCTCAGTCCCATAATAT 58.022 41.667 0.00 0.00 36.43 1.28
1579 2736 7.111136 TGTACTCCCTCAGTCCCATAATATA 57.889 40.000 0.00 0.00 36.43 0.86
1580 2737 7.541074 TGTACTCCCTCAGTCCCATAATATAA 58.459 38.462 0.00 0.00 36.43 0.98
1581 2738 7.674348 TGTACTCCCTCAGTCCCATAATATAAG 59.326 40.741 0.00 0.00 36.43 1.73
1582 2739 6.875469 ACTCCCTCAGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
1583 2740 6.957020 ACTCCCTCAGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
1584 2741 6.875469 TCCCTCAGTCCCATAATATAAGAGT 58.125 40.000 0.00 0.00 0.00 3.24
1587 2744 7.016661 CCCTCAGTCCCATAATATAAGAGTGTT 59.983 40.741 6.49 0.00 31.31 3.32
1589 2746 9.838339 CTCAGTCCCATAATATAAGAGTGTTTT 57.162 33.333 6.49 0.00 31.31 2.43
1617 2774 4.743644 ACTAGTGTAGTGTCAAAAACGCTC 59.256 41.667 0.00 0.00 45.69 5.03
1618 2775 3.793559 AGTGTAGTGTCAAAAACGCTCT 58.206 40.909 0.00 0.00 45.69 4.09
1619 2776 4.189231 AGTGTAGTGTCAAAAACGCTCTT 58.811 39.130 0.00 0.00 45.69 2.85
1620 2777 5.353938 AGTGTAGTGTCAAAAACGCTCTTA 58.646 37.500 0.00 0.00 45.69 2.10
1621 2778 5.989777 AGTGTAGTGTCAAAAACGCTCTTAT 59.010 36.000 0.00 0.00 45.69 1.73
1622 2779 7.149973 AGTGTAGTGTCAAAAACGCTCTTATA 58.850 34.615 0.00 0.00 45.69 0.98
1623 2780 7.817962 AGTGTAGTGTCAAAAACGCTCTTATAT 59.182 33.333 0.00 0.00 45.69 0.86
1624 2781 8.440833 GTGTAGTGTCAAAAACGCTCTTATATT 58.559 33.333 0.00 0.00 45.69 1.28
1625 2782 9.642327 TGTAGTGTCAAAAACGCTCTTATATTA 57.358 29.630 0.00 0.00 45.69 0.98
1628 2785 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
1629 2786 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
1630 2787 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
1631 2788 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
1632 2789 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
1633 2790 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
1634 2791 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
1635 2792 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
1636 2793 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
1637 2794 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
1638 2795 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
1643 2925 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
1689 2974 6.227522 TGTGAGTATTGGTCGATTGAAGAAA 58.772 36.000 0.00 0.00 0.00 2.52
1714 2999 4.252570 TGGTGGTCCTTTTAGGTTGAAA 57.747 40.909 0.00 0.00 36.53 2.69
1754 3039 0.255890 ACATCACCTACCATGGCACC 59.744 55.000 13.04 0.00 0.00 5.01
1775 3060 3.866651 CGAAGGGTGATTGAGAGAACAT 58.133 45.455 0.00 0.00 0.00 2.71
1779 3064 5.972107 AGGGTGATTGAGAGAACATTTTG 57.028 39.130 0.00 0.00 0.00 2.44
1819 3110 7.364970 CGGTTTAAAAACTGGCTAGTACAAAT 58.635 34.615 1.97 0.00 40.70 2.32
1889 3180 2.814336 CCAGCTACTGTTTTGGTCTTCC 59.186 50.000 0.00 0.00 0.00 3.46
1929 3220 7.815840 TGTGAAAATTACCATCACTTCTTGA 57.184 32.000 6.68 0.00 42.99 3.02
1930 3221 8.408043 TGTGAAAATTACCATCACTTCTTGAT 57.592 30.769 6.68 0.00 46.75 2.57
1931 3222 8.859090 TGTGAAAATTACCATCACTTCTTGATT 58.141 29.630 6.68 0.00 42.87 2.57
1932 3223 9.346725 GTGAAAATTACCATCACTTCTTGATTC 57.653 33.333 0.00 0.00 42.87 2.52
1933 3224 9.300681 TGAAAATTACCATCACTTCTTGATTCT 57.699 29.630 0.00 0.00 42.87 2.40
1934 3225 9.780413 GAAAATTACCATCACTTCTTGATTCTC 57.220 33.333 0.00 0.00 42.87 2.87
1935 3226 7.545362 AATTACCATCACTTCTTGATTCTCG 57.455 36.000 0.00 0.00 42.87 4.04
1936 3227 4.543590 ACCATCACTTCTTGATTCTCGT 57.456 40.909 0.00 0.00 42.87 4.18
1946 3237 4.166523 TCTTGATTCTCGTGTTTCTAGCG 58.833 43.478 0.00 0.00 0.00 4.26
1947 3238 2.876091 TGATTCTCGTGTTTCTAGCGG 58.124 47.619 0.00 0.00 0.00 5.52
1951 3242 1.068055 TCTCGTGTTTCTAGCGGAACC 60.068 52.381 0.00 0.00 33.13 3.62
1959 3250 4.202284 TGTTTCTAGCGGAACCTAACTGTT 60.202 41.667 0.00 0.00 33.13 3.16
1963 3254 6.290294 TCTAGCGGAACCTAACTGTTTTAT 57.710 37.500 0.00 0.00 0.00 1.40
2000 3291 7.337942 ACTCTTTGGGTTGATCTTAGCTAAATG 59.662 37.037 7.74 0.00 0.00 2.32
2001 3292 7.402054 TCTTTGGGTTGATCTTAGCTAAATGA 58.598 34.615 7.74 2.72 0.00 2.57
2009 3300 7.432148 TGATCTTAGCTAAATGACCCTACAA 57.568 36.000 7.74 0.00 0.00 2.41
2028 3319 3.181443 ACAAAGAACTGGGTTAGTCAGGG 60.181 47.826 0.00 0.00 39.18 4.45
2068 3367 7.994425 TTATTAAGACATGCCTCTGTTTGAA 57.006 32.000 0.00 0.00 0.00 2.69
2069 3368 8.579850 TTATTAAGACATGCCTCTGTTTGAAT 57.420 30.769 0.00 0.00 0.00 2.57
2076 3375 4.134379 TGCCTCTGTTTGAATTTTGCAA 57.866 36.364 0.00 0.00 0.00 4.08
2105 3409 8.752005 ACATGCAGGATGTAAATAACTAACAT 57.248 30.769 4.84 0.00 43.96 2.71
2738 4267 3.134623 AGCATACTGAAACCCATCGATGA 59.865 43.478 26.86 4.48 0.00 2.92
2882 4411 5.830991 AGGCTTCTAACGAGTCTAATGAGAT 59.169 40.000 0.00 0.00 33.14 2.75
3063 4620 8.504815 TCTGCGATATCTGTAGTACTGTTTATC 58.495 37.037 5.39 10.71 0.00 1.75
3132 4689 3.421844 ACCCTTTGAGCTTGTATTGTCC 58.578 45.455 0.00 0.00 0.00 4.02
3143 4700 6.125029 AGCTTGTATTGTCCTATCATTTGCT 58.875 36.000 0.00 0.00 0.00 3.91
3187 4744 7.530426 ACCTAAATTTTGATATCATGAGGCC 57.470 36.000 6.17 0.00 0.00 5.19
3188 4745 7.068702 ACCTAAATTTTGATATCATGAGGCCA 58.931 34.615 5.01 0.00 0.00 5.36
3189 4746 7.232127 ACCTAAATTTTGATATCATGAGGCCAG 59.768 37.037 5.01 0.00 0.00 4.85
3190 4747 6.415206 AAATTTTGATATCATGAGGCCAGG 57.585 37.500 5.01 0.00 0.00 4.45
3202 4763 2.102578 GAGGCCAGGTGTAAATTGCAT 58.897 47.619 5.01 0.00 0.00 3.96
3231 4792 2.499289 TGGTTGCATTCTTGTGTGGTTT 59.501 40.909 0.00 0.00 0.00 3.27
3322 4890 6.148976 CCATTGTGATATCGCTCTTCATGATT 59.851 38.462 16.85 0.00 0.00 2.57
3364 4932 9.990360 TCGAAATCCATATATGCAGTAAGTTTA 57.010 29.630 7.24 0.00 0.00 2.01
3449 5017 7.734538 AAGACATTCTTACAACAAACAAACG 57.265 32.000 0.00 0.00 34.42 3.60
3534 5102 1.307097 GAGATGGAAGGTGAGCATGC 58.693 55.000 10.51 10.51 0.00 4.06
3547 5115 1.080298 GCATGCCTGCTTGTTCCAC 60.080 57.895 6.36 0.00 45.32 4.02
3549 5117 0.675083 CATGCCTGCTTGTTCCACAA 59.325 50.000 0.00 0.00 36.54 3.33
3685 5254 3.826157 TCAAACATCCTCAACCAACATCC 59.174 43.478 0.00 0.00 0.00 3.51
3707 5276 7.587037 TCCTTCCATCTTTGCCTTATAAATG 57.413 36.000 0.00 0.00 0.00 2.32
3879 5449 3.153919 GAGGACAACATGGCAGGTTTAA 58.846 45.455 15.73 0.00 0.00 1.52
3913 5484 6.976088 TGAAAGGAATTAAGATGCGACAAAA 58.024 32.000 0.00 0.00 0.00 2.44
3925 5496 2.813754 TGCGACAAAATGAAGCTTAGCT 59.186 40.909 0.00 0.00 42.56 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 7.290061 TCTATTTATTTAGGATTGCTGGCACT 58.710 34.615 0.00 0.00 0.00 4.40
87 88 9.349145 GACTTCTAGTTATCTGAAAACAGACTC 57.651 37.037 0.00 0.00 33.58 3.36
88 89 8.861086 TGACTTCTAGTTATCTGAAAACAGACT 58.139 33.333 0.00 0.00 33.58 3.24
89 90 9.134734 CTGACTTCTAGTTATCTGAAAACAGAC 57.865 37.037 0.00 0.00 33.58 3.51
91 92 8.091449 ACCTGACTTCTAGTTATCTGAAAACAG 58.909 37.037 0.00 0.00 0.00 3.16
92 93 7.963532 ACCTGACTTCTAGTTATCTGAAAACA 58.036 34.615 0.00 0.00 0.00 2.83
93 94 9.356433 GTACCTGACTTCTAGTTATCTGAAAAC 57.644 37.037 0.00 0.00 0.00 2.43
95 96 8.740906 CAGTACCTGACTTCTAGTTATCTGAAA 58.259 37.037 0.00 0.00 35.64 2.69
96 97 7.889073 ACAGTACCTGACTTCTAGTTATCTGAA 59.111 37.037 0.00 0.00 35.64 3.02
97 98 7.337184 CACAGTACCTGACTTCTAGTTATCTGA 59.663 40.741 0.00 0.00 35.64 3.27
114 115 6.265649 CCTAGATTACACATAGCACAGTACCT 59.734 42.308 0.00 0.00 0.00 3.08
115 116 6.040616 ACCTAGATTACACATAGCACAGTACC 59.959 42.308 0.00 0.00 0.00 3.34
118 119 5.656859 TCACCTAGATTACACATAGCACAGT 59.343 40.000 0.00 0.00 0.00 3.55
119 120 6.149129 TCACCTAGATTACACATAGCACAG 57.851 41.667 0.00 0.00 0.00 3.66
177 178 3.425577 ACATGTGTGCAAGTTGAGTTG 57.574 42.857 7.16 0.00 0.00 3.16
188 189 2.849880 ACTGTGTTGAACATGTGTGC 57.150 45.000 0.00 0.00 38.39 4.57
189 190 3.128415 TGGAACTGTGTTGAACATGTGTG 59.872 43.478 0.00 0.00 38.39 3.82
218 219 9.489084 AATAAATTGAAAACCTAAAGCTGGTTC 57.511 29.630 7.37 0.00 45.99 3.62
272 273 9.493206 CCAAGAAAAACTCAAATGAAAAACATG 57.507 29.630 0.00 0.00 39.39 3.21
295 296 8.338072 TCGTAAATTTCAAAACTATAGGCCAA 57.662 30.769 5.01 0.00 0.00 4.52
297 298 9.285770 CTTTCGTAAATTTCAAAACTATAGGCC 57.714 33.333 4.43 0.00 0.00 5.19
318 319 4.214332 CCTGTTTTCTCTTCTTCCCTTTCG 59.786 45.833 0.00 0.00 0.00 3.46
325 326 6.867662 TCATCAACCTGTTTTCTCTTCTTC 57.132 37.500 0.00 0.00 0.00 2.87
326 327 6.264067 CCTTCATCAACCTGTTTTCTCTTCTT 59.736 38.462 0.00 0.00 0.00 2.52
338 339 2.288395 GCAAACCACCTTCATCAACCTG 60.288 50.000 0.00 0.00 0.00 4.00
350 351 1.210155 GCGAGACATGCAAACCACC 59.790 57.895 0.00 0.00 0.00 4.61
367 368 0.167470 TACACTCACTAGTCGCGTGC 59.833 55.000 5.77 0.00 31.97 5.34
373 374 5.354513 TGTCAGCTACATACACTCACTAGTC 59.645 44.000 0.00 0.00 29.83 2.59
392 393 2.917933 TCTTGTGAAAGTGGGTGTCAG 58.082 47.619 0.00 0.00 0.00 3.51
418 419 5.408604 CACTGGTCTAAACGCTCTTTAATGT 59.591 40.000 0.00 0.00 0.00 2.71
437 467 9.651718 GAAATATAAAAGCGTTTAGATCACTGG 57.348 33.333 11.74 0.00 31.44 4.00
443 473 9.916397 CGTGAAGAAATATAAAAGCGTTTAGAT 57.084 29.630 10.55 8.48 33.53 1.98
444 474 8.385111 CCGTGAAGAAATATAAAAGCGTTTAGA 58.615 33.333 10.55 6.46 32.76 2.10
445 475 8.385111 TCCGTGAAGAAATATAAAAGCGTTTAG 58.615 33.333 10.55 0.00 32.76 1.85
446 476 8.254178 TCCGTGAAGAAATATAAAAGCGTTTA 57.746 30.769 7.30 7.30 33.76 2.01
447 477 7.136289 TCCGTGAAGAAATATAAAAGCGTTT 57.864 32.000 2.53 2.53 0.00 3.60
448 478 6.183360 CCTCCGTGAAGAAATATAAAAGCGTT 60.183 38.462 0.00 0.00 0.00 4.84
449 479 5.293569 CCTCCGTGAAGAAATATAAAAGCGT 59.706 40.000 0.00 0.00 0.00 5.07
450 480 5.277345 CCCTCCGTGAAGAAATATAAAAGCG 60.277 44.000 0.00 0.00 0.00 4.68
451 481 5.008712 CCCCTCCGTGAAGAAATATAAAAGC 59.991 44.000 0.00 0.00 0.00 3.51
452 482 5.531287 CCCCCTCCGTGAAGAAATATAAAAG 59.469 44.000 0.00 0.00 0.00 2.27
453 483 5.044698 ACCCCCTCCGTGAAGAAATATAAAA 60.045 40.000 0.00 0.00 0.00 1.52
454 484 4.475747 ACCCCCTCCGTGAAGAAATATAAA 59.524 41.667 0.00 0.00 0.00 1.40
455 485 4.042174 ACCCCCTCCGTGAAGAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
466 496 1.261938 TGTGATGTACCCCCTCCGTG 61.262 60.000 0.00 0.00 0.00 4.94
469 499 1.213296 ATGTGTGATGTACCCCCTCC 58.787 55.000 0.00 0.00 0.00 4.30
470 500 4.141482 ACATTATGTGTGATGTACCCCCTC 60.141 45.833 0.00 0.00 40.28 4.30
474 504 5.925509 ACCTACATTATGTGTGATGTACCC 58.074 41.667 8.26 0.00 42.24 3.69
475 505 9.555727 AAATACCTACATTATGTGTGATGTACC 57.444 33.333 8.26 0.00 42.24 3.34
496 526 8.159344 ACTGATTAGAGCATAAAGGCAAATAC 57.841 34.615 0.00 0.00 35.83 1.89
548 578 1.064758 TGTTGCTCCTTCACCACAGTT 60.065 47.619 0.00 0.00 0.00 3.16
549 579 0.546122 TGTTGCTCCTTCACCACAGT 59.454 50.000 0.00 0.00 0.00 3.55
550 580 1.808945 GATGTTGCTCCTTCACCACAG 59.191 52.381 0.00 0.00 0.00 3.66
551 581 1.877680 CGATGTTGCTCCTTCACCACA 60.878 52.381 0.00 0.00 0.00 4.17
552 582 0.798776 CGATGTTGCTCCTTCACCAC 59.201 55.000 0.00 0.00 0.00 4.16
553 583 0.396435 ACGATGTTGCTCCTTCACCA 59.604 50.000 0.00 0.00 0.00 4.17
554 584 0.798776 CACGATGTTGCTCCTTCACC 59.201 55.000 0.00 0.00 0.00 4.02
555 585 0.798776 CCACGATGTTGCTCCTTCAC 59.201 55.000 0.00 0.00 0.00 3.18
556 586 0.396435 ACCACGATGTTGCTCCTTCA 59.604 50.000 0.00 0.00 0.00 3.02
557 587 1.079503 GACCACGATGTTGCTCCTTC 58.920 55.000 0.00 0.00 0.00 3.46
558 588 0.687354 AGACCACGATGTTGCTCCTT 59.313 50.000 0.00 0.00 0.00 3.36
559 589 1.557099 TAGACCACGATGTTGCTCCT 58.443 50.000 0.00 0.00 0.00 3.69
560 590 2.380084 TTAGACCACGATGTTGCTCC 57.620 50.000 0.00 0.00 0.00 4.70
561 591 4.946784 AAATTAGACCACGATGTTGCTC 57.053 40.909 0.00 0.00 0.00 4.26
562 592 6.811253 TTTAAATTAGACCACGATGTTGCT 57.189 33.333 0.00 0.00 0.00 3.91
563 593 7.044966 CGAATTTAAATTAGACCACGATGTTGC 60.045 37.037 13.34 0.00 0.00 4.17
564 594 8.172484 TCGAATTTAAATTAGACCACGATGTTG 58.828 33.333 16.81 0.00 0.00 3.33
565 595 8.259049 TCGAATTTAAATTAGACCACGATGTT 57.741 30.769 16.81 0.00 0.00 2.71
566 596 7.837202 TCGAATTTAAATTAGACCACGATGT 57.163 32.000 16.81 0.00 0.00 3.06
567 597 9.158364 CATTCGAATTTAAATTAGACCACGATG 57.842 33.333 19.49 16.09 31.24 3.84
568 598 8.889717 ACATTCGAATTTAAATTAGACCACGAT 58.110 29.630 19.49 10.04 31.24 3.73
569 599 8.172484 CACATTCGAATTTAAATTAGACCACGA 58.828 33.333 19.49 16.14 31.24 4.35
570 600 7.428183 CCACATTCGAATTTAAATTAGACCACG 59.572 37.037 19.49 14.46 31.24 4.94
571 601 8.455682 TCCACATTCGAATTTAAATTAGACCAC 58.544 33.333 19.49 4.58 31.24 4.16
572 602 8.568676 TCCACATTCGAATTTAAATTAGACCA 57.431 30.769 19.49 9.65 31.24 4.02
573 603 9.503427 CTTCCACATTCGAATTTAAATTAGACC 57.497 33.333 19.49 5.51 31.24 3.85
578 608 9.626045 GTTCTCTTCCACATTCGAATTTAAATT 57.374 29.630 13.24 13.24 0.00 1.82
579 609 7.962918 CGTTCTCTTCCACATTCGAATTTAAAT 59.037 33.333 8.21 0.00 0.00 1.40
580 610 7.295201 CGTTCTCTTCCACATTCGAATTTAAA 58.705 34.615 8.21 0.00 0.00 1.52
581 611 6.128391 CCGTTCTCTTCCACATTCGAATTTAA 60.128 38.462 8.21 0.00 0.00 1.52
582 612 5.350365 CCGTTCTCTTCCACATTCGAATTTA 59.650 40.000 8.21 0.00 0.00 1.40
583 613 4.154195 CCGTTCTCTTCCACATTCGAATTT 59.846 41.667 8.21 0.00 0.00 1.82
584 614 3.684788 CCGTTCTCTTCCACATTCGAATT 59.315 43.478 8.21 0.00 0.00 2.17
585 615 3.262420 CCGTTCTCTTCCACATTCGAAT 58.738 45.455 4.39 4.39 0.00 3.34
586 616 2.036733 ACCGTTCTCTTCCACATTCGAA 59.963 45.455 0.00 0.00 0.00 3.71
587 617 1.616865 ACCGTTCTCTTCCACATTCGA 59.383 47.619 0.00 0.00 0.00 3.71
588 618 1.726791 CACCGTTCTCTTCCACATTCG 59.273 52.381 0.00 0.00 0.00 3.34
589 619 2.767505 ACACCGTTCTCTTCCACATTC 58.232 47.619 0.00 0.00 0.00 2.67
590 620 2.930826 ACACCGTTCTCTTCCACATT 57.069 45.000 0.00 0.00 0.00 2.71
591 621 2.368875 AGAACACCGTTCTCTTCCACAT 59.631 45.455 3.55 0.00 0.00 3.21
592 622 1.760613 AGAACACCGTTCTCTTCCACA 59.239 47.619 3.55 0.00 0.00 4.17
593 623 2.528041 AGAACACCGTTCTCTTCCAC 57.472 50.000 3.55 0.00 0.00 4.02
594 624 3.118555 TCAAAGAACACCGTTCTCTTCCA 60.119 43.478 9.67 0.00 0.00 3.53
595 625 3.463944 TCAAAGAACACCGTTCTCTTCC 58.536 45.455 9.67 0.00 0.00 3.46
596 626 4.152580 GGATCAAAGAACACCGTTCTCTTC 59.847 45.833 9.67 5.25 0.00 2.87
597 627 4.065789 GGATCAAAGAACACCGTTCTCTT 58.934 43.478 9.67 4.69 0.00 2.85
598 628 3.071023 TGGATCAAAGAACACCGTTCTCT 59.929 43.478 9.67 0.00 0.00 3.10
599 629 3.399330 TGGATCAAAGAACACCGTTCTC 58.601 45.455 9.67 0.00 0.00 2.87
600 630 3.485463 TGGATCAAAGAACACCGTTCT 57.515 42.857 3.55 3.55 0.00 3.01
601 631 3.564225 ACTTGGATCAAAGAACACCGTTC 59.436 43.478 17.08 0.00 0.00 3.95
602 632 3.551846 ACTTGGATCAAAGAACACCGTT 58.448 40.909 17.08 0.00 0.00 4.44
603 633 3.208747 ACTTGGATCAAAGAACACCGT 57.791 42.857 17.08 0.00 0.00 4.83
604 634 3.058224 GGAACTTGGATCAAAGAACACCG 60.058 47.826 17.08 0.00 0.00 4.94
605 635 4.022849 CAGGAACTTGGATCAAAGAACACC 60.023 45.833 17.08 12.42 34.60 4.16
606 636 4.580580 ACAGGAACTTGGATCAAAGAACAC 59.419 41.667 17.08 4.04 34.60 3.32
607 637 4.580167 CACAGGAACTTGGATCAAAGAACA 59.420 41.667 17.08 0.00 34.60 3.18
608 638 4.022849 CCACAGGAACTTGGATCAAAGAAC 60.023 45.833 17.08 9.21 38.35 3.01
609 639 4.144297 CCACAGGAACTTGGATCAAAGAA 58.856 43.478 17.08 0.00 38.35 2.52
610 640 3.138283 ACCACAGGAACTTGGATCAAAGA 59.862 43.478 17.08 0.00 38.35 2.52
611 641 3.490348 ACCACAGGAACTTGGATCAAAG 58.510 45.455 8.40 8.40 38.35 2.77
612 642 3.593442 ACCACAGGAACTTGGATCAAA 57.407 42.857 0.00 0.00 38.35 2.69
613 643 3.593442 AACCACAGGAACTTGGATCAA 57.407 42.857 0.00 0.00 38.35 2.57
614 644 3.486383 GAAACCACAGGAACTTGGATCA 58.514 45.455 0.00 0.00 38.35 2.92
615 645 2.820197 GGAAACCACAGGAACTTGGATC 59.180 50.000 0.00 0.00 38.35 3.36
616 646 2.814097 CGGAAACCACAGGAACTTGGAT 60.814 50.000 0.00 0.00 38.35 3.41
617 647 1.476110 CGGAAACCACAGGAACTTGGA 60.476 52.381 0.00 0.00 38.35 3.53
618 648 0.951558 CGGAAACCACAGGAACTTGG 59.048 55.000 0.00 0.00 40.64 3.61
619 649 0.951558 CCGGAAACCACAGGAACTTG 59.048 55.000 0.00 0.00 34.60 3.16
620 650 0.841289 TCCGGAAACCACAGGAACTT 59.159 50.000 0.00 0.00 34.60 2.66
621 651 1.064825 ATCCGGAAACCACAGGAACT 58.935 50.000 9.01 0.00 37.63 3.01
622 652 1.905637 AATCCGGAAACCACAGGAAC 58.094 50.000 9.01 0.00 37.63 3.62
623 653 2.668144 AAATCCGGAAACCACAGGAA 57.332 45.000 9.01 0.00 37.63 3.36
624 654 2.158593 TGAAAATCCGGAAACCACAGGA 60.159 45.455 9.01 0.00 38.36 3.86
625 655 2.030274 GTGAAAATCCGGAAACCACAGG 60.030 50.000 9.01 0.00 0.00 4.00
626 656 2.621055 TGTGAAAATCCGGAAACCACAG 59.379 45.455 20.84 0.00 0.00 3.66
627 657 2.621055 CTGTGAAAATCCGGAAACCACA 59.379 45.455 22.29 22.29 0.00 4.17
628 658 2.882137 TCTGTGAAAATCCGGAAACCAC 59.118 45.455 9.01 14.75 0.00 4.16
629 659 3.216187 TCTGTGAAAATCCGGAAACCA 57.784 42.857 9.01 1.13 0.00 3.67
630 660 4.577834 TTTCTGTGAAAATCCGGAAACC 57.422 40.909 9.01 0.00 32.47 3.27
631 661 7.011016 ACAAAATTTCTGTGAAAATCCGGAAAC 59.989 33.333 9.01 2.81 38.41 2.78
632 662 7.044798 ACAAAATTTCTGTGAAAATCCGGAAA 58.955 30.769 9.01 0.00 39.53 3.13
633 663 6.578023 ACAAAATTTCTGTGAAAATCCGGAA 58.422 32.000 9.01 0.00 0.00 4.30
634 664 6.155475 ACAAAATTTCTGTGAAAATCCGGA 57.845 33.333 6.61 6.61 0.00 5.14
635 665 6.586082 CCTACAAAATTTCTGTGAAAATCCGG 59.414 38.462 0.00 0.00 0.00 5.14
636 666 7.367285 TCCTACAAAATTTCTGTGAAAATCCG 58.633 34.615 13.08 0.00 0.00 4.18
637 667 9.710900 AATCCTACAAAATTTCTGTGAAAATCC 57.289 29.630 13.08 0.00 0.00 3.01
658 688 8.913335 AGGGAGTACTACTATGGTTATAATCCT 58.087 37.037 4.77 2.11 33.35 3.24
659 689 9.187996 GAGGGAGTACTACTATGGTTATAATCC 57.812 40.741 4.77 9.19 32.69 3.01
660 690 9.187996 GGAGGGAGTACTACTATGGTTATAATC 57.812 40.741 4.77 0.00 0.00 1.75
661 691 7.833183 CGGAGGGAGTACTACTATGGTTATAAT 59.167 40.741 4.77 0.00 0.00 1.28
662 692 7.170965 CGGAGGGAGTACTACTATGGTTATAA 58.829 42.308 4.77 0.00 0.00 0.98
663 693 6.273260 ACGGAGGGAGTACTACTATGGTTATA 59.727 42.308 4.77 0.00 0.00 0.98
664 694 5.074239 ACGGAGGGAGTACTACTATGGTTAT 59.926 44.000 4.77 0.00 0.00 1.89
665 695 4.413520 ACGGAGGGAGTACTACTATGGTTA 59.586 45.833 4.77 0.00 0.00 2.85
666 696 3.203934 ACGGAGGGAGTACTACTATGGTT 59.796 47.826 4.77 0.00 0.00 3.67
667 697 2.782341 ACGGAGGGAGTACTACTATGGT 59.218 50.000 4.77 0.00 0.00 3.55
668 698 3.410508 GACGGAGGGAGTACTACTATGG 58.589 54.545 4.77 0.00 0.00 2.74
669 699 3.410508 GGACGGAGGGAGTACTACTATG 58.589 54.545 4.77 1.47 0.00 2.23
670 700 2.038295 CGGACGGAGGGAGTACTACTAT 59.962 54.545 4.77 0.00 0.00 2.12
671 701 1.414181 CGGACGGAGGGAGTACTACTA 59.586 57.143 4.77 0.00 0.00 1.82
672 702 0.179936 CGGACGGAGGGAGTACTACT 59.820 60.000 4.77 1.85 0.00 2.57
673 703 0.817229 CCGGACGGAGGGAGTACTAC 60.817 65.000 4.40 0.00 37.50 2.73
674 704 0.982852 TCCGGACGGAGGGAGTACTA 60.983 60.000 9.76 0.00 39.76 1.82
675 705 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
676 706 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
677 707 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
678 708 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
679 709 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
680 710 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
681 711 0.388294 GAGTATTTCCGGACGGAGGG 59.612 60.000 13.64 0.00 46.06 4.30
682 712 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.00 46.06 4.30
683 713 0.737219 ACGAGTATTTCCGGACGGAG 59.263 55.000 13.64 3.15 46.06 4.63
684 714 0.734889 GACGAGTATTTCCGGACGGA 59.265 55.000 1.83 9.76 43.52 4.69
685 715 0.590732 CGACGAGTATTTCCGGACGG 60.591 60.000 1.83 3.96 0.00 4.79
686 716 0.590732 CCGACGAGTATTTCCGGACG 60.591 60.000 1.83 5.89 42.49 4.79
687 717 0.734889 TCCGACGAGTATTTCCGGAC 59.265 55.000 1.83 0.00 43.47 4.79
688 718 1.019673 CTCCGACGAGTATTTCCGGA 58.980 55.000 0.00 0.00 45.74 5.14
689 719 0.030369 CCTCCGACGAGTATTTCCGG 59.970 60.000 0.00 0.00 41.36 5.14
690 720 1.019673 TCCTCCGACGAGTATTTCCG 58.980 55.000 0.00 0.00 33.93 4.30
691 721 3.067742 TCATTCCTCCGACGAGTATTTCC 59.932 47.826 0.00 0.00 33.93 3.13
692 722 4.303086 TCATTCCTCCGACGAGTATTTC 57.697 45.455 0.00 0.00 33.93 2.17
693 723 4.730949 TTCATTCCTCCGACGAGTATTT 57.269 40.909 0.00 0.00 33.93 1.40
694 724 4.099573 ACATTCATTCCTCCGACGAGTATT 59.900 41.667 0.00 0.00 33.93 1.89
695 725 3.637229 ACATTCATTCCTCCGACGAGTAT 59.363 43.478 0.00 0.00 33.93 2.12
696 726 3.021695 ACATTCATTCCTCCGACGAGTA 58.978 45.455 0.00 0.00 33.93 2.59
697 727 1.825474 ACATTCATTCCTCCGACGAGT 59.175 47.619 0.00 0.00 33.93 4.18
698 728 2.586258 ACATTCATTCCTCCGACGAG 57.414 50.000 0.00 0.00 35.72 4.18
699 729 3.889538 AGATACATTCATTCCTCCGACGA 59.110 43.478 0.00 0.00 0.00 4.20
700 730 4.244425 AGATACATTCATTCCTCCGACG 57.756 45.455 0.00 0.00 0.00 5.12
701 731 6.016192 TGTCTAGATACATTCATTCCTCCGAC 60.016 42.308 0.00 0.00 0.00 4.79
702 732 6.068670 TGTCTAGATACATTCATTCCTCCGA 58.931 40.000 0.00 0.00 0.00 4.55
703 733 6.332735 TGTCTAGATACATTCATTCCTCCG 57.667 41.667 0.00 0.00 0.00 4.63
741 771 9.467258 CGGAGAAATGCATAAAAATGAATGTAT 57.533 29.630 0.00 0.00 30.86 2.29
742 772 8.681806 TCGGAGAAATGCATAAAAATGAATGTA 58.318 29.630 0.00 0.00 0.00 2.29
743 773 7.489113 GTCGGAGAAATGCATAAAAATGAATGT 59.511 33.333 0.00 0.00 39.69 2.71
744 774 7.488792 TGTCGGAGAAATGCATAAAAATGAATG 59.511 33.333 0.00 0.00 39.69 2.67
745 775 7.546358 TGTCGGAGAAATGCATAAAAATGAAT 58.454 30.769 0.00 0.00 39.69 2.57
746 776 6.918626 TGTCGGAGAAATGCATAAAAATGAA 58.081 32.000 0.00 0.00 39.69 2.57
747 777 6.507958 TGTCGGAGAAATGCATAAAAATGA 57.492 33.333 0.00 0.00 39.69 2.57
748 778 6.808212 ACTTGTCGGAGAAATGCATAAAAATG 59.192 34.615 0.00 0.00 39.69 2.32
749 779 6.924111 ACTTGTCGGAGAAATGCATAAAAAT 58.076 32.000 0.00 0.00 39.69 1.82
750 780 6.325919 ACTTGTCGGAGAAATGCATAAAAA 57.674 33.333 0.00 0.00 39.69 1.94
751 781 5.957842 ACTTGTCGGAGAAATGCATAAAA 57.042 34.783 0.00 0.00 39.69 1.52
752 782 7.624360 AATACTTGTCGGAGAAATGCATAAA 57.376 32.000 0.00 0.00 39.69 1.40
753 783 7.201696 GGAAATACTTGTCGGAGAAATGCATAA 60.202 37.037 0.00 0.00 39.69 1.90
754 784 6.260050 GGAAATACTTGTCGGAGAAATGCATA 59.740 38.462 0.00 0.00 39.69 3.14
755 785 5.066505 GGAAATACTTGTCGGAGAAATGCAT 59.933 40.000 0.00 0.00 39.69 3.96
756 786 4.394920 GGAAATACTTGTCGGAGAAATGCA 59.605 41.667 0.00 0.00 39.69 3.96
757 787 4.494199 CGGAAATACTTGTCGGAGAAATGC 60.494 45.833 0.00 0.00 39.69 3.56
758 788 4.034048 CCGGAAATACTTGTCGGAGAAATG 59.966 45.833 0.00 0.00 42.94 2.32
759 789 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
760 790 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
761 791 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
762 792 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
763 793 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
764 794 1.894466 TGTCCGGAAATACTTGTCGGA 59.106 47.619 5.23 0.00 46.06 4.55
765 795 2.094390 TCTGTCCGGAAATACTTGTCGG 60.094 50.000 5.23 0.00 41.80 4.79
766 796 3.179830 CTCTGTCCGGAAATACTTGTCG 58.820 50.000 5.23 0.00 0.00 4.35
767 797 3.522553 CCTCTGTCCGGAAATACTTGTC 58.477 50.000 5.23 0.00 0.00 3.18
768 798 2.236395 CCCTCTGTCCGGAAATACTTGT 59.764 50.000 5.23 0.00 0.00 3.16
769 799 2.500098 TCCCTCTGTCCGGAAATACTTG 59.500 50.000 5.23 0.00 0.00 3.16
770 800 2.829023 TCCCTCTGTCCGGAAATACTT 58.171 47.619 5.23 0.00 0.00 2.24
771 801 2.544844 TCCCTCTGTCCGGAAATACT 57.455 50.000 5.23 0.00 0.00 2.12
772 802 2.500504 ACTTCCCTCTGTCCGGAAATAC 59.499 50.000 5.23 0.00 37.69 1.89
773 803 2.829023 ACTTCCCTCTGTCCGGAAATA 58.171 47.619 5.23 0.00 37.69 1.40
774 804 1.657804 ACTTCCCTCTGTCCGGAAAT 58.342 50.000 5.23 0.00 37.69 2.17
775 805 2.314071 TACTTCCCTCTGTCCGGAAA 57.686 50.000 5.23 0.00 37.69 3.13
776 806 2.544844 ATACTTCCCTCTGTCCGGAA 57.455 50.000 5.23 0.00 36.69 4.30
777 807 2.544844 AATACTTCCCTCTGTCCGGA 57.455 50.000 0.00 0.00 0.00 5.14
778 808 3.629142 AAAATACTTCCCTCTGTCCGG 57.371 47.619 0.00 0.00 0.00 5.14
779 809 3.617263 CGAAAAATACTTCCCTCTGTCCG 59.383 47.826 0.00 0.00 0.00 4.79
780 810 4.576879 ACGAAAAATACTTCCCTCTGTCC 58.423 43.478 0.00 0.00 0.00 4.02
781 811 6.817140 ACATACGAAAAATACTTCCCTCTGTC 59.183 38.462 0.00 0.00 0.00 3.51
782 812 6.708285 ACATACGAAAAATACTTCCCTCTGT 58.292 36.000 0.00 0.00 0.00 3.41
783 813 7.201617 GGAACATACGAAAAATACTTCCCTCTG 60.202 40.741 0.00 0.00 0.00 3.35
784 814 6.822170 GGAACATACGAAAAATACTTCCCTCT 59.178 38.462 0.00 0.00 0.00 3.69
785 815 6.596497 TGGAACATACGAAAAATACTTCCCTC 59.404 38.462 0.00 0.00 0.00 4.30
786 816 6.478129 TGGAACATACGAAAAATACTTCCCT 58.522 36.000 0.00 0.00 0.00 4.20
787 817 6.746745 TGGAACATACGAAAAATACTTCCC 57.253 37.500 0.00 0.00 0.00 3.97
800 830 5.991568 TGTACAAAACACATGGAACATACG 58.008 37.500 0.00 0.00 36.55 3.06
808 838 4.445052 CACATGCTTGTACAAAACACATGG 59.555 41.667 27.03 18.79 42.60 3.66
810 840 5.067674 AGACACATGCTTGTACAAAACACAT 59.932 36.000 10.03 8.24 38.00 3.21
825 855 2.227388 CCAGGAAGTTCAAGACACATGC 59.773 50.000 5.01 0.00 0.00 4.06
873 1977 9.462606 AGAAAGTTCAGAAAAAGAGGAGTTTTA 57.537 29.630 0.00 0.00 0.00 1.52
875 1979 7.946381 AGAAAGTTCAGAAAAAGAGGAGTTT 57.054 32.000 0.00 0.00 0.00 2.66
879 1983 7.283329 AGCTTAGAAAGTTCAGAAAAAGAGGA 58.717 34.615 0.00 0.00 0.00 3.71
900 2004 0.037232 GGAGCAGGAACACGTAGCTT 60.037 55.000 0.00 0.00 35.36 3.74
902 2006 0.737715 CAGGAGCAGGAACACGTAGC 60.738 60.000 0.00 0.00 0.00 3.58
903 2007 0.737715 GCAGGAGCAGGAACACGTAG 60.738 60.000 0.00 0.00 41.58 3.51
904 2008 1.292223 GCAGGAGCAGGAACACGTA 59.708 57.895 0.00 0.00 41.58 3.57
923 2030 4.364860 GAACCCTTTGCGTTTGTATTTGT 58.635 39.130 0.00 0.00 0.00 2.83
924 2031 3.738791 GGAACCCTTTGCGTTTGTATTTG 59.261 43.478 0.00 0.00 0.00 2.32
926 2033 3.227614 AGGAACCCTTTGCGTTTGTATT 58.772 40.909 0.00 0.00 0.00 1.89
927 2034 2.817844 GAGGAACCCTTTGCGTTTGTAT 59.182 45.455 0.00 0.00 31.76 2.29
928 2035 2.158726 AGAGGAACCCTTTGCGTTTGTA 60.159 45.455 0.00 0.00 31.76 2.41
929 2036 1.029681 GAGGAACCCTTTGCGTTTGT 58.970 50.000 0.00 0.00 31.76 2.83
930 2037 1.318576 AGAGGAACCCTTTGCGTTTG 58.681 50.000 0.00 0.00 31.76 2.93
931 2038 1.954382 GAAGAGGAACCCTTTGCGTTT 59.046 47.619 0.00 0.00 31.76 3.60
932 2039 1.143073 AGAAGAGGAACCCTTTGCGTT 59.857 47.619 0.00 0.00 31.76 4.84
934 2041 1.002544 AGAGAAGAGGAACCCTTTGCG 59.997 52.381 0.00 0.00 31.76 4.85
936 2043 4.068599 GTTCAGAGAAGAGGAACCCTTTG 58.931 47.826 0.00 0.00 35.93 2.77
937 2044 4.359434 GTTCAGAGAAGAGGAACCCTTT 57.641 45.455 0.00 0.00 35.93 3.11
945 2067 3.406764 CTTGTTGGGTTCAGAGAAGAGG 58.593 50.000 0.00 0.00 0.00 3.69
979 2101 4.410743 GCTGCTTTGCCTGCGACC 62.411 66.667 0.00 0.00 0.00 4.79
991 2113 3.121030 CGCTACGGCTTTGCTGCT 61.121 61.111 0.00 0.00 38.71 4.24
992 2114 4.166011 CCGCTACGGCTTTGCTGC 62.166 66.667 0.00 0.00 41.17 5.25
1002 2124 2.413765 GCCCTCTCTTCCGCTACG 59.586 66.667 0.00 0.00 0.00 3.51
1003 2125 2.816012 GGCCCTCTCTTCCGCTAC 59.184 66.667 0.00 0.00 0.00 3.58
1004 2126 2.833582 CGGCCCTCTCTTCCGCTA 60.834 66.667 0.00 0.00 36.53 4.26
1007 2129 3.391665 ATTGCGGCCCTCTCTTCCG 62.392 63.158 0.00 0.00 45.46 4.30
1008 2130 1.524849 GATTGCGGCCCTCTCTTCC 60.525 63.158 0.00 0.00 0.00 3.46
1009 2131 1.524849 GGATTGCGGCCCTCTCTTC 60.525 63.158 0.00 0.00 0.00 2.87
1010 2132 2.592308 GGATTGCGGCCCTCTCTT 59.408 61.111 0.00 0.00 0.00 2.85
1011 2133 3.483869 GGGATTGCGGCCCTCTCT 61.484 66.667 0.00 0.00 42.56 3.10
1128 2253 3.999297 GACGGCGAGGAGGAGGAGT 62.999 68.421 16.62 0.00 0.00 3.85
1384 2518 5.376854 ACACACAATAAACATCAGGAAGC 57.623 39.130 0.00 0.00 0.00 3.86
1435 2591 6.192970 AGGCAATTAACCTAGCTATCATGT 57.807 37.500 0.00 0.00 35.10 3.21
1436 2592 7.013655 ACAAAGGCAATTAACCTAGCTATCATG 59.986 37.037 0.00 0.00 36.14 3.07
1437 2593 7.062957 ACAAAGGCAATTAACCTAGCTATCAT 58.937 34.615 0.00 0.00 36.14 2.45
1438 2594 6.423182 ACAAAGGCAATTAACCTAGCTATCA 58.577 36.000 0.00 0.00 36.14 2.15
1439 2595 6.944234 ACAAAGGCAATTAACCTAGCTATC 57.056 37.500 0.00 0.00 36.14 2.08
1440 2596 8.272173 TCTTACAAAGGCAATTAACCTAGCTAT 58.728 33.333 0.00 0.00 36.14 2.97
1441 2597 7.626390 TCTTACAAAGGCAATTAACCTAGCTA 58.374 34.615 0.00 0.00 36.14 3.32
1442 2598 6.481643 TCTTACAAAGGCAATTAACCTAGCT 58.518 36.000 0.00 0.00 36.14 3.32
1443 2599 6.753107 TCTTACAAAGGCAATTAACCTAGC 57.247 37.500 0.00 0.00 36.14 3.42
1444 2600 8.956426 TGAATCTTACAAAGGCAATTAACCTAG 58.044 33.333 0.00 0.03 36.14 3.02
1445 2601 8.871629 TGAATCTTACAAAGGCAATTAACCTA 57.128 30.769 0.00 0.00 36.14 3.08
1446 2602 7.775053 TGAATCTTACAAAGGCAATTAACCT 57.225 32.000 0.00 0.00 40.02 3.50
1447 2603 7.706607 GGATGAATCTTACAAAGGCAATTAACC 59.293 37.037 0.00 0.00 0.00 2.85
1448 2604 8.250332 TGGATGAATCTTACAAAGGCAATTAAC 58.750 33.333 0.00 0.00 0.00 2.01
1449 2605 8.359875 TGGATGAATCTTACAAAGGCAATTAA 57.640 30.769 0.00 0.00 0.00 1.40
1450 2606 7.953005 TGGATGAATCTTACAAAGGCAATTA 57.047 32.000 0.00 0.00 0.00 1.40
1451 2607 6.855763 TGGATGAATCTTACAAAGGCAATT 57.144 33.333 0.00 0.00 0.00 2.32
1452 2608 8.716674 ATATGGATGAATCTTACAAAGGCAAT 57.283 30.769 0.00 0.00 0.00 3.56
1493 2650 6.369059 AGTGCTATGAATTATGACAGCAAC 57.631 37.500 0.00 0.00 40.41 4.17
1497 2654 9.447040 CAATGAAAGTGCTATGAATTATGACAG 57.553 33.333 0.00 0.00 0.00 3.51
1518 2675 5.745312 AACTCCACTGTCTGTATCAATGA 57.255 39.130 0.00 0.00 0.00 2.57
1526 2683 2.158755 CCAGGAAAACTCCACTGTCTGT 60.159 50.000 0.00 0.00 0.00 3.41
1548 2705 4.104420 GGGACTGAGGGAGTACATACTAGA 59.896 50.000 0.00 0.00 37.23 2.43
1551 2708 2.585900 TGGGACTGAGGGAGTACATACT 59.414 50.000 0.00 0.00 37.23 2.12
1552 2709 3.028094 TGGGACTGAGGGAGTACATAC 57.972 52.381 0.00 0.00 37.23 2.39
1553 2710 3.993658 ATGGGACTGAGGGAGTACATA 57.006 47.619 0.00 0.00 37.23 2.29
1554 2711 2.877154 ATGGGACTGAGGGAGTACAT 57.123 50.000 0.00 0.00 37.23 2.29
1555 2712 3.769189 TTATGGGACTGAGGGAGTACA 57.231 47.619 0.00 0.00 37.23 2.90
1556 2713 7.894364 TCTTATATTATGGGACTGAGGGAGTAC 59.106 40.741 0.00 0.00 33.83 2.73
1557 2714 8.008104 TCTTATATTATGGGACTGAGGGAGTA 57.992 38.462 0.00 0.00 33.83 2.59
1560 2717 6.726299 CACTCTTATATTATGGGACTGAGGGA 59.274 42.308 0.00 0.00 0.00 4.20
1561 2718 6.498651 ACACTCTTATATTATGGGACTGAGGG 59.501 42.308 0.00 0.00 0.00 4.30
1562 2719 7.546250 ACACTCTTATATTATGGGACTGAGG 57.454 40.000 0.00 0.00 0.00 3.86
1594 2751 4.690122 AGCGTTTTTGACACTACACTAGT 58.310 39.130 0.00 0.00 40.28 2.57
1595 2752 4.982916 AGAGCGTTTTTGACACTACACTAG 59.017 41.667 0.00 0.00 0.00 2.57
1596 2753 4.940463 AGAGCGTTTTTGACACTACACTA 58.060 39.130 0.00 0.00 0.00 2.74
1597 2754 3.793559 AGAGCGTTTTTGACACTACACT 58.206 40.909 0.00 0.00 0.00 3.55
1598 2755 4.531659 AAGAGCGTTTTTGACACTACAC 57.468 40.909 0.00 0.00 0.00 2.90
1599 2756 8.542497 AATATAAGAGCGTTTTTGACACTACA 57.458 30.769 0.00 0.00 0.00 2.74
1602 2759 8.612619 CCATAATATAAGAGCGTTTTTGACACT 58.387 33.333 0.00 0.00 0.00 3.55
1603 2760 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
1604 2761 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
1605 2762 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
1606 2763 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
1607 2764 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
1608 2765 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
1609 2766 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
1610 2767 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
1611 2768 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
1612 2769 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
1613 2770 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
1614 2771 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
1615 2772 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
1616 2773 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
1617 2774 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
1618 2775 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
1619 2776 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
1620 2777 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
1621 2778 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
1622 2779 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
1623 2780 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
1624 2781 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
1625 2782 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
1626 2783 0.613853 CAACTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
1627 2784 1.957765 GCAACTACTCCCTCCGTCCC 61.958 65.000 0.00 0.00 0.00 4.46
1628 2785 0.971447 AGCAACTACTCCCTCCGTCC 60.971 60.000 0.00 0.00 0.00 4.79
1629 2786 1.760192 TAGCAACTACTCCCTCCGTC 58.240 55.000 0.00 0.00 0.00 4.79
1630 2787 1.823610 GTTAGCAACTACTCCCTCCGT 59.176 52.381 0.00 0.00 0.00 4.69
1631 2788 2.100989 AGTTAGCAACTACTCCCTCCG 58.899 52.381 0.44 0.00 40.69 4.63
1632 2789 3.770388 AGAAGTTAGCAACTACTCCCTCC 59.230 47.826 2.60 0.00 41.91 4.30
1633 2790 6.153170 AGTTAGAAGTTAGCAACTACTCCCTC 59.847 42.308 2.60 0.00 41.91 4.30
1634 2791 6.017830 AGTTAGAAGTTAGCAACTACTCCCT 58.982 40.000 2.60 0.00 41.91 4.20
1635 2792 6.100668 CAGTTAGAAGTTAGCAACTACTCCC 58.899 44.000 2.60 0.00 41.91 4.30
1636 2793 6.071503 TCCAGTTAGAAGTTAGCAACTACTCC 60.072 42.308 2.60 0.00 41.91 3.85
1637 2794 6.921914 TCCAGTTAGAAGTTAGCAACTACTC 58.078 40.000 2.60 0.00 41.91 2.59
1638 2795 6.912951 TCCAGTTAGAAGTTAGCAACTACT 57.087 37.500 2.60 0.92 41.91 2.57
1643 2925 6.595326 CACATCATCCAGTTAGAAGTTAGCAA 59.405 38.462 0.00 0.00 0.00 3.91
1689 2974 3.958147 CAACCTAAAAGGACCACCAAAGT 59.042 43.478 0.00 0.00 37.67 2.66
1730 3015 4.096382 GTGCCATGGTAGGTGATGTAAAAG 59.904 45.833 14.67 0.00 0.00 2.27
1754 3039 3.319137 TGTTCTCTCAATCACCCTTCG 57.681 47.619 0.00 0.00 0.00 3.79
1766 3051 7.730364 TTTAGAGTGTCCAAAATGTTCTCTC 57.270 36.000 0.00 0.00 33.70 3.20
1775 3060 5.231702 ACCGGTATTTAGAGTGTCCAAAA 57.768 39.130 4.49 0.00 0.00 2.44
1779 3064 7.671495 TTTTAAACCGGTATTTAGAGTGTCC 57.329 36.000 8.00 0.00 0.00 4.02
1819 3110 6.770785 ACAAGTAATCACTAAGCAGTCCAAAA 59.229 34.615 0.00 0.00 33.48 2.44
1929 3220 3.251571 GTTCCGCTAGAAACACGAGAAT 58.748 45.455 0.00 0.00 35.85 2.40
1930 3221 2.608752 GGTTCCGCTAGAAACACGAGAA 60.609 50.000 0.00 0.00 42.22 2.87
1931 3222 1.068055 GGTTCCGCTAGAAACACGAGA 60.068 52.381 0.00 0.00 42.22 4.04
1932 3223 1.067776 AGGTTCCGCTAGAAACACGAG 60.068 52.381 0.00 0.00 45.37 4.18
1933 3224 0.963962 AGGTTCCGCTAGAAACACGA 59.036 50.000 0.00 0.00 45.37 4.35
1934 3225 2.642139 TAGGTTCCGCTAGAAACACG 57.358 50.000 0.00 0.00 45.37 4.49
1935 3226 3.678548 CAGTTAGGTTCCGCTAGAAACAC 59.321 47.826 0.00 0.00 45.37 3.32
1936 3227 3.322828 ACAGTTAGGTTCCGCTAGAAACA 59.677 43.478 0.00 0.00 45.37 2.83
1946 3237 8.260270 ACAATACGATAAAACAGTTAGGTTCC 57.740 34.615 0.00 0.00 0.00 3.62
1959 3250 8.851541 ACCCAAAGAGTTAACAATACGATAAA 57.148 30.769 8.61 0.00 0.00 1.40
1963 3254 6.289834 TCAACCCAAAGAGTTAACAATACGA 58.710 36.000 8.61 0.00 0.00 3.43
1973 3264 5.248380 AGCTAAGATCAACCCAAAGAGTT 57.752 39.130 0.00 0.00 0.00 3.01
1982 3273 5.685728 AGGGTCATTTAGCTAAGATCAACC 58.314 41.667 6.24 10.65 0.00 3.77
2009 3300 2.702748 ACCCTGACTAACCCAGTTCTT 58.297 47.619 0.00 0.00 37.72 2.52
2050 3341 5.535333 CAAAATTCAAACAGAGGCATGTCT 58.465 37.500 0.00 0.00 31.50 3.41
2051 3342 4.151157 GCAAAATTCAAACAGAGGCATGTC 59.849 41.667 0.00 0.00 31.50 3.06
2052 3343 4.060205 GCAAAATTCAAACAGAGGCATGT 58.940 39.130 0.00 0.00 33.96 3.21
2058 3357 9.588774 CATGTAAATTGCAAAATTCAAACAGAG 57.411 29.630 1.71 0.00 0.00 3.35
2105 3409 6.015519 CCAATGATCAGGGTGAAACTTTGTAA 60.016 38.462 0.09 0.00 36.74 2.41
2640 4169 3.259374 AGAAGTTCCTCTGATCTTGCGAA 59.741 43.478 0.00 0.00 32.06 4.70
2673 4202 3.824133 CTGCCAAGGATCATCAACCATA 58.176 45.455 0.00 0.00 0.00 2.74
2717 4246 3.248602 GTCATCGATGGGTTTCAGTATGC 59.751 47.826 24.61 0.00 34.76 3.14
2882 4411 1.136110 TGACAAAGAGCTCACGTCACA 59.864 47.619 21.87 10.70 31.92 3.58
3183 4740 1.826720 CATGCAATTTACACCTGGCCT 59.173 47.619 3.32 0.00 0.00 5.19
3186 4743 2.492881 TCAGCATGCAATTTACACCTGG 59.507 45.455 21.98 0.00 34.76 4.45
3187 4744 3.853831 TCAGCATGCAATTTACACCTG 57.146 42.857 21.98 5.14 34.76 4.00
3188 4745 5.172934 CAATTCAGCATGCAATTTACACCT 58.827 37.500 21.98 0.00 34.76 4.00
3189 4746 4.330620 CCAATTCAGCATGCAATTTACACC 59.669 41.667 21.98 0.00 34.76 4.16
3190 4747 4.931002 ACCAATTCAGCATGCAATTTACAC 59.069 37.500 21.98 0.00 34.76 2.90
3202 4763 3.069872 ACAAGAATGCAACCAATTCAGCA 59.930 39.130 0.00 0.00 41.73 4.41
3251 4812 3.349304 TCCATGCATGCCCTGGGT 61.349 61.111 27.14 0.00 0.00 4.51
3322 4890 1.435577 TCGACGATCGACAGTTCAGA 58.564 50.000 24.34 4.29 44.82 3.27
3547 5115 3.431912 TCGGTTCATGTCGAAGTTCATTG 59.568 43.478 3.32 0.00 33.09 2.82
3549 5117 3.313012 TCGGTTCATGTCGAAGTTCAT 57.687 42.857 3.32 0.00 33.09 2.57
3594 5162 2.485426 CGAAGATGCACTTTGTGGATGT 59.515 45.455 9.30 2.93 44.19 3.06
3685 5254 9.305925 GTTTCATTTATAAGGCAAAGATGGAAG 57.694 33.333 0.00 0.00 0.00 3.46
3707 5276 6.813152 ACATAATTAGCACCAGCAAATGTTTC 59.187 34.615 0.00 0.00 45.49 2.78
3879 5449 7.989416 TCTTAATTCCTTTCATGTACCGTTT 57.011 32.000 0.00 0.00 0.00 3.60
3934 5505 1.176619 TGTCATGACGAGGTCGGTGT 61.177 55.000 20.54 0.00 44.95 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.