Multiple sequence alignment - TraesCS1D01G312600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G312600 chr1D 100.000 4598 0 0 1 4598 408431278 408435875 0.000000e+00 8492.0
1 TraesCS1D01G312600 chr1D 86.738 656 55 17 3257 3898 408454078 408454715 0.000000e+00 701.0
2 TraesCS1D01G312600 chr1A 91.186 2530 121 35 6 2475 504312319 504314806 0.000000e+00 3343.0
3 TraesCS1D01G312600 chr1A 88.112 1430 93 33 2551 3926 504314812 504316218 0.000000e+00 1628.0
4 TraesCS1D01G312600 chr1A 90.354 622 52 8 3979 4598 504394434 504395049 0.000000e+00 809.0
5 TraesCS1D01G312600 chr1A 83.543 875 102 23 3040 3899 504406379 504407226 0.000000e+00 780.0
6 TraesCS1D01G312600 chr1A 86.178 709 68 16 3164 3861 504418850 504419539 0.000000e+00 739.0
7 TraesCS1D01G312600 chr1A 89.873 395 33 7 4203 4594 504411027 504411417 6.870000e-138 501.0
8 TraesCS1D01G312600 chr1A 98.361 61 1 0 3926 3986 504316250 504316310 1.750000e-19 108.0
9 TraesCS1D01G312600 chr1B 91.584 1105 43 22 1022 2114 549518362 549519428 0.000000e+00 1480.0
10 TraesCS1D01G312600 chr1B 86.471 1397 119 27 2567 3923 549611010 549612376 0.000000e+00 1469.0
11 TraesCS1D01G312600 chr1B 91.283 803 46 9 3130 3926 549520568 549521352 0.000000e+00 1074.0
12 TraesCS1D01G312600 chr1B 84.677 881 91 17 3040 3898 549599037 549599895 0.000000e+00 839.0
13 TraesCS1D01G312600 chr1B 84.884 774 83 15 3164 3926 549733439 549734189 0.000000e+00 750.0
14 TraesCS1D01G312600 chr1B 88.982 599 47 9 3176 3770 549635468 549636051 0.000000e+00 723.0
15 TraesCS1D01G312600 chr1B 88.144 582 58 4 3981 4561 549521725 549522296 0.000000e+00 682.0
16 TraesCS1D01G312600 chr1B 91.600 500 16 4 398 893 549517471 549517948 0.000000e+00 667.0
17 TraesCS1D01G312600 chr1B 96.049 329 11 1 2149 2475 549519431 549519759 6.770000e-148 534.0
18 TraesCS1D01G312600 chr1B 91.250 320 20 2 2788 3099 549520143 549520462 3.290000e-116 429.0
19 TraesCS1D01G312600 chr1B 89.706 340 17 5 2136 2475 549610669 549610990 7.120000e-113 418.0
20 TraesCS1D01G312600 chr1B 88.087 277 32 1 3926 4202 549612408 549612683 1.230000e-85 327.0
21 TraesCS1D01G312600 chr1B 90.119 253 22 1 3387 3636 549703947 549704199 4.440000e-85 326.0
22 TraesCS1D01G312600 chr1B 87.432 183 20 3 2508 2688 549719142 549719323 1.680000e-49 207.0
23 TraesCS1D01G312600 chr1B 84.541 207 27 3 3720 3926 549722260 549722461 2.810000e-47 200.0
24 TraesCS1D01G312600 chr1B 83.648 159 15 4 2741 2891 549722106 549722261 6.200000e-29 139.0
25 TraesCS1D01G312600 chr1B 89.011 91 7 2 3651 3740 549705461 549705549 4.860000e-20 110.0
26 TraesCS1D01G312600 chr1B 96.552 58 1 1 3928 3984 549521390 549521447 1.360000e-15 95.3
27 TraesCS1D01G312600 chr3D 87.646 599 69 3 1045 1642 437218219 437217625 0.000000e+00 691.0
28 TraesCS1D01G312600 chr3D 77.758 571 124 1 1054 1624 575129812 575129245 9.470000e-92 348.0
29 TraesCS1D01G312600 chr3B 87.124 598 72 3 1045 1641 572488198 572487605 0.000000e+00 673.0
30 TraesCS1D01G312600 chr3B 78.809 571 118 1 1054 1624 764693729 764694296 9.340000e-102 381.0
31 TraesCS1D01G312600 chr3A 87.124 598 72 3 1045 1641 575314269 575313676 0.000000e+00 673.0
32 TraesCS1D01G312600 chr3A 78.147 572 120 3 1054 1624 710274395 710274962 4.370000e-95 359.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G312600 chr1D 408431278 408435875 4597 False 8492.000000 8492 100.000000 1 4598 1 chr1D.!!$F1 4597
1 TraesCS1D01G312600 chr1D 408454078 408454715 637 False 701.000000 701 86.738000 3257 3898 1 chr1D.!!$F2 641
2 TraesCS1D01G312600 chr1A 504312319 504316310 3991 False 1693.000000 3343 92.553000 6 3986 3 chr1A.!!$F3 3980
3 TraesCS1D01G312600 chr1A 504394434 504395049 615 False 809.000000 809 90.354000 3979 4598 1 chr1A.!!$F1 619
4 TraesCS1D01G312600 chr1A 504418850 504419539 689 False 739.000000 739 86.178000 3164 3861 1 chr1A.!!$F2 697
5 TraesCS1D01G312600 chr1A 504406379 504411417 5038 False 640.500000 780 86.708000 3040 4594 2 chr1A.!!$F4 1554
6 TraesCS1D01G312600 chr1B 549599037 549599895 858 False 839.000000 839 84.677000 3040 3898 1 chr1B.!!$F1 858
7 TraesCS1D01G312600 chr1B 549733439 549734189 750 False 750.000000 750 84.884000 3164 3926 1 chr1B.!!$F3 762
8 TraesCS1D01G312600 chr1B 549610669 549612683 2014 False 738.000000 1469 88.088000 2136 4202 3 chr1B.!!$F5 2066
9 TraesCS1D01G312600 chr1B 549635468 549636051 583 False 723.000000 723 88.982000 3176 3770 1 chr1B.!!$F2 594
10 TraesCS1D01G312600 chr1B 549517471 549522296 4825 False 708.757143 1480 92.351714 398 4561 7 chr1B.!!$F4 4163
11 TraesCS1D01G312600 chr1B 549703947 549705549 1602 False 218.000000 326 89.565000 3387 3740 2 chr1B.!!$F6 353
12 TraesCS1D01G312600 chr3D 437217625 437218219 594 True 691.000000 691 87.646000 1045 1642 1 chr3D.!!$R1 597
13 TraesCS1D01G312600 chr3D 575129245 575129812 567 True 348.000000 348 77.758000 1054 1624 1 chr3D.!!$R2 570
14 TraesCS1D01G312600 chr3B 572487605 572488198 593 True 673.000000 673 87.124000 1045 1641 1 chr3B.!!$R1 596
15 TraesCS1D01G312600 chr3B 764693729 764694296 567 False 381.000000 381 78.809000 1054 1624 1 chr3B.!!$F1 570
16 TraesCS1D01G312600 chr3A 575313676 575314269 593 True 673.000000 673 87.124000 1045 1641 1 chr3A.!!$R1 596
17 TraesCS1D01G312600 chr3A 710274395 710274962 567 False 359.000000 359 78.147000 1054 1624 1 chr3A.!!$F1 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
42 43 0.248907 ACATTAGGCGTGTCGATCGG 60.249 55.0 16.41 0.0 0.0 4.18 F
155 162 0.321653 GGTTCAATCCTGGTGCTCGT 60.322 55.0 0.00 0.0 0.0 4.18 F
1725 2062 0.588252 CCAAATCCGGCGCTGAATAG 59.412 55.0 20.25 0.0 0.0 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1700 2037 0.393808 AGCGCCGGATTTGGTGTAAT 60.394 50.000 5.05 0.0 41.67 1.89 R
2115 2462 7.038587 AGGGAACATGCCAAAGTATATACGATA 60.039 37.037 7.23 0.0 0.00 2.92 R
3637 4215 0.041312 CGGCAAACAGTGGAAACTCG 60.041 55.000 0.00 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.767255 GGGCTGTCGCAGGAGGTG 62.767 72.222 8.57 0.00 38.10 4.00
24 25 4.083862 GTCGCAGGAGGTGGGGAC 62.084 72.222 0.00 0.00 39.61 4.46
36 37 0.743345 GTGGGGACATTAGGCGTGTC 60.743 60.000 10.81 10.81 46.14 3.67
38 39 1.514087 GGGACATTAGGCGTGTCGA 59.486 57.895 12.29 0.00 45.32 4.20
41 42 1.121240 GACATTAGGCGTGTCGATCG 58.879 55.000 9.36 9.36 36.92 3.69
42 43 0.248907 ACATTAGGCGTGTCGATCGG 60.249 55.000 16.41 0.00 0.00 4.18
67 68 5.336531 GGTTGAAGACGAATAGGAAGTCTGA 60.337 44.000 0.00 0.00 43.60 3.27
85 86 4.993584 GTCTGAAAGTTGAAGATGAGCAGA 59.006 41.667 0.00 0.00 33.76 4.26
90 91 4.199432 AGTTGAAGATGAGCAGACGAAT 57.801 40.909 0.00 0.00 0.00 3.34
95 96 2.898705 AGATGAGCAGACGAATCAACC 58.101 47.619 0.00 0.00 0.00 3.77
99 100 1.996191 GAGCAGACGAATCAACCTGTC 59.004 52.381 0.00 0.00 0.00 3.51
115 116 2.418746 CCTGTCGTTGGATGGTTAGGAG 60.419 54.545 0.00 0.00 0.00 3.69
116 117 1.553248 TGTCGTTGGATGGTTAGGAGG 59.447 52.381 0.00 0.00 0.00 4.30
119 120 1.831736 CGTTGGATGGTTAGGAGGACT 59.168 52.381 0.00 0.00 0.00 3.85
127 133 1.652947 GTTAGGAGGACTGTCCCCAA 58.347 55.000 26.17 18.31 37.19 4.12
130 136 1.539124 GGAGGACTGTCCCCAACCT 60.539 63.158 22.81 3.31 37.19 3.50
132 138 1.625508 GGAGGACTGTCCCCAACCTAT 60.626 57.143 22.81 1.72 37.19 2.57
137 143 0.839946 CTGTCCCCAACCTATCAGGG 59.160 60.000 0.00 0.00 40.58 4.45
142 148 1.638589 CCCCAACCTATCAGGGTTCAA 59.361 52.381 0.00 0.00 46.58 2.69
146 153 3.203040 CCAACCTATCAGGGTTCAATCCT 59.797 47.826 0.00 0.00 46.58 3.24
155 162 0.321653 GGTTCAATCCTGGTGCTCGT 60.322 55.000 0.00 0.00 0.00 4.18
156 163 1.066430 GGTTCAATCCTGGTGCTCGTA 60.066 52.381 0.00 0.00 0.00 3.43
187 194 8.073355 TCTCGATTTTATTTTAGGATTCTCGC 57.927 34.615 0.00 0.00 0.00 5.03
193 200 8.842358 TTTTATTTTAGGATTCTCGCCGATAT 57.158 30.769 0.00 0.00 0.00 1.63
194 201 7.827819 TTATTTTAGGATTCTCGCCGATATG 57.172 36.000 0.00 0.00 0.00 1.78
195 202 2.941453 TAGGATTCTCGCCGATATGC 57.059 50.000 0.00 0.00 0.00 3.14
204 211 2.971997 GCCGATATGCGTTCAGTGA 58.028 52.632 0.00 0.00 38.67 3.41
205 212 1.286501 GCCGATATGCGTTCAGTGAA 58.713 50.000 0.08 0.08 38.67 3.18
209 216 3.804325 CCGATATGCGTTCAGTGAAAGAT 59.196 43.478 21.04 13.53 38.67 2.40
217 224 4.785341 GCGTTCAGTGAAAGATGACGTTTT 60.785 41.667 21.04 0.00 0.00 2.43
235 242 2.183858 TTCGTCGACTGAGGTGCTCG 62.184 60.000 14.70 0.00 32.35 5.03
245 252 1.076192 AGGTGCTCGTAGGGGTAGG 60.076 63.158 0.00 0.00 0.00 3.18
248 255 0.974525 GTGCTCGTAGGGGTAGGGTT 60.975 60.000 0.00 0.00 0.00 4.11
251 258 1.410517 GCTCGTAGGGGTAGGGTTTAC 59.589 57.143 0.00 0.00 0.00 2.01
253 260 1.005450 TCGTAGGGGTAGGGTTTACGT 59.995 52.381 0.00 0.00 38.48 3.57
254 261 1.134946 CGTAGGGGTAGGGTTTACGTG 59.865 57.143 0.00 0.00 34.16 4.49
255 262 2.179427 GTAGGGGTAGGGTTTACGTGT 58.821 52.381 0.00 0.00 0.00 4.49
256 263 2.621556 AGGGGTAGGGTTTACGTGTA 57.378 50.000 0.00 0.00 0.00 2.90
267 274 9.801873 GTAGGGTTTACGTGTATGTTTATAAGA 57.198 33.333 0.00 0.00 0.00 2.10
275 301 6.921857 ACGTGTATGTTTATAAGATAAGCGCT 59.078 34.615 2.64 2.64 0.00 5.92
277 303 7.736017 CGTGTATGTTTATAAGATAAGCGCTTG 59.264 37.037 32.23 4.63 0.00 4.01
278 304 7.530861 GTGTATGTTTATAAGATAAGCGCTTGC 59.469 37.037 32.23 22.58 39.58 4.01
327 353 6.183309 AGTTGAAGATGAGCCGTTAAATTC 57.817 37.500 0.00 0.00 0.00 2.17
332 358 6.152661 TGAAGATGAGCCGTTAAATTCCAATT 59.847 34.615 0.00 0.00 0.00 2.32
334 360 3.843999 TGAGCCGTTAAATTCCAATTGC 58.156 40.909 0.00 0.00 0.00 3.56
396 426 2.552315 ACTGAAAAATACGTGGCCAGTG 59.448 45.455 5.11 4.02 32.85 3.66
400 430 2.264005 AAATACGTGGCCAGTGTGAA 57.736 45.000 18.57 2.34 0.00 3.18
427 457 2.795297 CGAGACGAGTCAGCCTCC 59.205 66.667 5.99 0.00 36.82 4.30
623 659 2.285368 ATTCCCCTCGTGCTCCCA 60.285 61.111 0.00 0.00 0.00 4.37
695 736 0.889994 TCCGCTCGCCAACTTTACTA 59.110 50.000 0.00 0.00 0.00 1.82
940 989 2.581354 CTTAGCTGGCCTGCGACT 59.419 61.111 26.64 13.80 38.13 4.18
941 990 1.812922 CTTAGCTGGCCTGCGACTG 60.813 63.158 26.64 14.13 38.13 3.51
942 991 3.958147 TTAGCTGGCCTGCGACTGC 62.958 63.158 26.64 8.85 43.20 4.40
1666 2003 8.426489 TCTTTGCTGAACTTTCCTTACTTACTA 58.574 33.333 0.00 0.00 0.00 1.82
1667 2004 7.958053 TTGCTGAACTTTCCTTACTTACTAC 57.042 36.000 0.00 0.00 0.00 2.73
1716 2053 3.859411 TTTGATTACACCAAATCCGGC 57.141 42.857 0.00 0.00 35.40 6.13
1725 2062 0.588252 CCAAATCCGGCGCTGAATAG 59.412 55.000 20.25 0.00 0.00 1.73
1866 2210 7.646314 TCGTATCCTTTATCTGTACTTAGTGC 58.354 38.462 0.00 0.00 0.00 4.40
1870 2214 5.128827 TCCTTTATCTGTACTTAGTGCCCTG 59.871 44.000 0.00 0.00 0.00 4.45
1883 2227 2.940994 TGCCCTGCACAACTACTAAA 57.059 45.000 0.00 0.00 31.71 1.85
1884 2228 3.433306 TGCCCTGCACAACTACTAAAT 57.567 42.857 0.00 0.00 31.71 1.40
1911 2258 9.494271 GATTATACAGCACATTCTCTTTATCCA 57.506 33.333 0.00 0.00 0.00 3.41
2230 2581 5.712917 GGAGAATATTCTGTATCTCGGAGGT 59.287 44.000 22.61 0.00 39.33 3.85
2293 2644 0.179116 CTCGCATCTGTGGGTCTGAG 60.179 60.000 0.00 0.00 39.18 3.35
2475 2828 4.203654 TGAGCATGCCTCATATCATCTC 57.796 45.455 15.66 0.80 45.44 2.75
2476 2829 3.055312 TGAGCATGCCTCATATCATCTCC 60.055 47.826 15.66 0.00 45.44 3.71
2477 2830 3.182976 AGCATGCCTCATATCATCTCCT 58.817 45.455 15.66 0.00 0.00 3.69
2478 2831 3.587951 AGCATGCCTCATATCATCTCCTT 59.412 43.478 15.66 0.00 0.00 3.36
2479 2832 4.043059 AGCATGCCTCATATCATCTCCTTT 59.957 41.667 15.66 0.00 0.00 3.11
2480 2833 4.765856 GCATGCCTCATATCATCTCCTTTT 59.234 41.667 6.36 0.00 0.00 2.27
2481 2834 5.106237 GCATGCCTCATATCATCTCCTTTTC 60.106 44.000 6.36 0.00 0.00 2.29
2482 2835 4.635223 TGCCTCATATCATCTCCTTTTCG 58.365 43.478 0.00 0.00 0.00 3.46
2483 2836 4.101585 TGCCTCATATCATCTCCTTTTCGT 59.898 41.667 0.00 0.00 0.00 3.85
2484 2837 4.450419 GCCTCATATCATCTCCTTTTCGTG 59.550 45.833 0.00 0.00 0.00 4.35
2485 2838 5.740224 GCCTCATATCATCTCCTTTTCGTGA 60.740 44.000 0.00 0.00 0.00 4.35
2486 2839 6.283694 CCTCATATCATCTCCTTTTCGTGAA 58.716 40.000 0.00 0.00 0.00 3.18
2487 2840 6.763135 CCTCATATCATCTCCTTTTCGTGAAA 59.237 38.462 0.00 0.00 0.00 2.69
2488 2841 7.280876 CCTCATATCATCTCCTTTTCGTGAAAA 59.719 37.037 7.48 7.48 37.90 2.29
2489 2842 8.560355 TCATATCATCTCCTTTTCGTGAAAAA 57.440 30.769 8.90 0.00 39.49 1.94
2528 2881 4.424061 TGCTCAGGAAAATGAAATCGTG 57.576 40.909 0.00 0.00 33.83 4.35
2532 2885 6.095377 GCTCAGGAAAATGAAATCGTGATTT 58.905 36.000 7.52 7.52 43.14 2.17
2566 2919 5.845391 TTTTTAAGGAACAGGGAACACAG 57.155 39.130 0.00 0.00 0.00 3.66
2623 2976 8.877864 TGTTGAAACCTTATGTTGAATATCCT 57.122 30.769 0.00 0.00 37.23 3.24
2624 2977 8.739039 TGTTGAAACCTTATGTTGAATATCCTG 58.261 33.333 0.00 0.00 37.23 3.86
2629 2982 5.824624 ACCTTATGTTGAATATCCTGCACTG 59.175 40.000 0.00 0.00 0.00 3.66
2645 2998 4.854173 TGCACTGTACCATGGAATATGTT 58.146 39.130 21.47 0.00 0.00 2.71
2696 3074 7.596621 TGATGTTATCTCTTTCACGATGCTATC 59.403 37.037 0.00 0.00 0.00 2.08
2722 3102 6.048732 TGCAGGATACAGTAGATTCAAACA 57.951 37.500 0.00 0.00 41.41 2.83
2812 3275 3.386932 TTCAGGGCCTAATCTTGCAAT 57.613 42.857 5.28 0.00 0.00 3.56
2815 3278 1.043022 GGGCCTAATCTTGCAATGGG 58.957 55.000 0.84 0.00 0.00 4.00
2845 3316 2.684001 TTCTTGTAGGTATGGTGGCG 57.316 50.000 0.00 0.00 0.00 5.69
2857 3328 2.672996 GTGGCGGCACTGACCAAT 60.673 61.111 32.54 0.00 34.63 3.16
2866 3337 1.446792 ACTGACCAATGAGAGCGCG 60.447 57.895 0.00 0.00 0.00 6.86
2953 3424 0.899019 AAGAGCCCGAGAGACTTTCC 59.101 55.000 0.00 0.00 0.00 3.13
2984 3455 9.920133 CACTATTAGCAGATACTTATGTCACAT 57.080 33.333 0.00 0.00 0.00 3.21
2987 3458 5.998454 AGCAGATACTTATGTCACATTGC 57.002 39.130 0.00 0.00 0.00 3.56
3004 3475 2.177394 TGCTGAAAGGTCGTAATGCA 57.823 45.000 0.00 0.00 0.00 3.96
3025 3496 5.476599 TGCATGGTATGGACATAAATTAGCC 59.523 40.000 0.00 0.00 0.00 3.93
3073 3544 1.888512 GACAGCATCAAAGGCAAAGGA 59.111 47.619 0.00 0.00 0.00 3.36
3105 3576 5.067283 AGGTTTGTGTCACCATCTTAACAAC 59.933 40.000 0.00 0.00 36.67 3.32
3115 3670 8.185505 GTCACCATCTTAACAACACAAAGTTTA 58.814 33.333 0.00 0.00 38.74 2.01
3138 3693 5.209818 TGTTACTTGACTTACTGTCTGGG 57.790 43.478 0.00 0.00 45.54 4.45
3150 3705 1.338020 CTGTCTGGGTGAGTTTTTGGC 59.662 52.381 0.00 0.00 0.00 4.52
3153 3708 2.430694 GTCTGGGTGAGTTTTTGGCTTT 59.569 45.455 0.00 0.00 0.00 3.51
3162 3717 4.522405 TGAGTTTTTGGCTTTGCATAGCTA 59.478 37.500 25.25 18.75 40.99 3.32
3194 3752 8.950403 AAGTTCTATGTTCGTTTCTAAATTGC 57.050 30.769 0.00 0.00 0.00 3.56
3448 4025 8.321716 GTCTGAATTTTCTGTACTACTTATGCG 58.678 37.037 0.00 0.00 0.00 4.73
3632 4210 6.531240 CCTTTATTTATGCAGAAATGTTGCGT 59.469 34.615 25.60 4.52 44.40 5.24
3636 4214 1.837648 TGCAGAAATGTTGCGTGTTG 58.162 45.000 0.00 0.00 44.40 3.33
3637 4215 0.503961 GCAGAAATGTTGCGTGTTGC 59.496 50.000 0.00 0.00 46.70 4.17
3648 4226 1.772063 GCGTGTTGCGAGTTTCCACT 61.772 55.000 0.00 0.00 44.77 4.00
3661 5493 1.243902 TTCCACTGTTTGCCGATTCC 58.756 50.000 0.00 0.00 0.00 3.01
3696 5528 2.541588 CCCGCAAGTGCATATTTGTAGC 60.542 50.000 3.87 0.00 42.21 3.58
3775 5640 1.536284 GCCTCTTATCGTCCGAGTTGG 60.536 57.143 0.00 0.00 40.09 3.77
3986 6216 7.919690 TGTAATCTAATGCTTGTATGAAGTGC 58.080 34.615 0.00 0.00 0.00 4.40
4007 6237 3.135530 GCCCCACTATTCAGTCTCTGATT 59.864 47.826 0.24 0.69 40.39 2.57
4082 6314 0.329596 AGCCCCGCTCTCAAAAGAAT 59.670 50.000 0.00 0.00 30.62 2.40
4091 6323 6.086871 CCGCTCTCAAAAGAATAAGAAAACC 58.913 40.000 0.00 0.00 0.00 3.27
4125 6359 4.096003 CCACCCGAACTGCCCGAT 62.096 66.667 0.00 0.00 0.00 4.18
4160 6394 4.700213 ACATAGTTTTGAGACATTTCCGGG 59.300 41.667 0.00 0.00 0.00 5.73
4161 6395 2.514803 AGTTTTGAGACATTTCCGGGG 58.485 47.619 0.00 0.00 0.00 5.73
4167 6402 1.201429 AGACATTTCCGGGGCTCAGT 61.201 55.000 0.00 0.00 0.00 3.41
4168 6403 1.002134 ACATTTCCGGGGCTCAGTG 60.002 57.895 0.00 0.00 0.00 3.66
4221 9820 3.764237 AAAGTGTCATGGTACCGTCTT 57.236 42.857 2.76 1.65 0.00 3.01
4234 9833 3.735237 ACCGTCTTCTCATCGCATATT 57.265 42.857 0.00 0.00 0.00 1.28
4249 9848 1.933181 CATATTTGCAACGAGCCGAGA 59.067 47.619 0.00 0.00 44.83 4.04
4261 9860 2.608998 CGAGCCGAGAATCATGTGCTAT 60.609 50.000 0.00 0.00 33.17 2.97
4276 9875 6.874134 TCATGTGCTATGATCATCTTCATGAG 59.126 38.462 24.88 14.31 42.53 2.90
4289 9888 9.902684 ATCATCTTCATGAGTTCATCTTTACTT 57.097 29.630 0.00 0.00 42.53 2.24
4317 9916 3.012518 CAAGAGGGATGACACATTGGTC 58.987 50.000 0.00 0.00 38.29 4.02
4329 9928 2.930040 CACATTGGTCGATCTGGTGTAC 59.070 50.000 0.00 0.00 0.00 2.90
4346 9945 1.612463 GTACGGACTTGGTGTGAGAGT 59.388 52.381 0.00 0.00 0.00 3.24
4355 9954 4.081420 ACTTGGTGTGAGAGTATTGCTAGG 60.081 45.833 0.00 0.00 0.00 3.02
4425 10024 6.293407 ACATAGTTGTGATGTGTTTAGCACAC 60.293 38.462 3.62 0.00 46.82 3.82
4528 10127 1.064758 TGCATCCCATACCCAACAGTC 60.065 52.381 0.00 0.00 0.00 3.51
4561 10162 7.434569 TCCTAATAGGCCAAGCTAAGTGCTAT 61.435 42.308 5.01 0.00 43.10 2.97
4571 10172 4.294416 GCTAAGTGCTATCTCGAACTCA 57.706 45.455 0.00 0.00 38.95 3.41
4572 10173 4.865776 GCTAAGTGCTATCTCGAACTCAT 58.134 43.478 0.00 0.00 38.95 2.90
4573 10174 4.915085 GCTAAGTGCTATCTCGAACTCATC 59.085 45.833 0.00 0.00 38.95 2.92
4574 10175 5.278266 GCTAAGTGCTATCTCGAACTCATCT 60.278 44.000 0.00 0.00 38.95 2.90
4575 10176 5.590530 AAGTGCTATCTCGAACTCATCTT 57.409 39.130 0.00 0.00 0.00 2.40
4594 10195 3.054139 TCTTCCCAGTGCAGCAATAGAAT 60.054 43.478 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.767255 CACCTCCTGCGACAGCCC 62.767 72.222 0.00 0.00 44.33 5.19
3 4 4.767255 CCACCTCCTGCGACAGCC 62.767 72.222 0.00 0.00 44.33 4.85
4 5 4.767255 CCCACCTCCTGCGACAGC 62.767 72.222 0.00 0.00 45.41 4.40
10 11 0.181350 CTAATGTCCCCACCTCCTGC 59.819 60.000 0.00 0.00 0.00 4.85
11 12 0.839946 CCTAATGTCCCCACCTCCTG 59.160 60.000 0.00 0.00 0.00 3.86
15 16 1.615424 ACGCCTAATGTCCCCACCT 60.615 57.895 0.00 0.00 0.00 4.00
18 19 1.600107 GACACGCCTAATGTCCCCA 59.400 57.895 0.00 0.00 40.56 4.96
19 20 1.520787 CGACACGCCTAATGTCCCC 60.521 63.158 0.00 0.00 42.97 4.81
24 25 0.939577 CCCGATCGACACGCCTAATG 60.940 60.000 18.66 0.00 0.00 1.90
36 37 0.108992 TTCGTCTTCAACCCCGATCG 60.109 55.000 8.51 8.51 0.00 3.69
38 39 2.102588 CCTATTCGTCTTCAACCCCGAT 59.897 50.000 0.00 0.00 0.00 4.18
41 42 3.055312 ACTTCCTATTCGTCTTCAACCCC 60.055 47.826 0.00 0.00 0.00 4.95
42 43 4.081586 AGACTTCCTATTCGTCTTCAACCC 60.082 45.833 0.00 0.00 34.55 4.11
67 68 3.995199 TCGTCTGCTCATCTTCAACTTT 58.005 40.909 0.00 0.00 0.00 2.66
95 96 2.418746 CCTCCTAACCATCCAACGACAG 60.419 54.545 0.00 0.00 0.00 3.51
99 100 1.831736 AGTCCTCCTAACCATCCAACG 59.168 52.381 0.00 0.00 0.00 4.10
107 108 0.252558 TGGGGACAGTCCTCCTAACC 60.253 60.000 17.62 9.99 35.67 2.85
115 116 1.486726 CTGATAGGTTGGGGACAGTCC 59.513 57.143 11.70 11.70 44.54 3.85
116 117 1.486726 CCTGATAGGTTGGGGACAGTC 59.513 57.143 0.00 0.00 44.54 3.51
119 120 0.120377 ACCCTGATAGGTTGGGGACA 59.880 55.000 3.72 0.00 44.97 4.02
137 143 2.380084 TACGAGCACCAGGATTGAAC 57.620 50.000 0.00 0.00 0.00 3.18
162 169 7.170998 GGCGAGAATCCTAAAATAAAATCGAGA 59.829 37.037 0.00 0.00 0.00 4.04
163 170 7.291567 GGCGAGAATCCTAAAATAAAATCGAG 58.708 38.462 0.00 0.00 0.00 4.04
164 171 6.073980 CGGCGAGAATCCTAAAATAAAATCGA 60.074 38.462 0.00 0.00 0.00 3.59
165 172 6.071463 CGGCGAGAATCCTAAAATAAAATCG 58.929 40.000 0.00 0.00 0.00 3.34
166 173 7.186021 TCGGCGAGAATCCTAAAATAAAATC 57.814 36.000 4.99 0.00 0.00 2.17
167 174 7.745620 ATCGGCGAGAATCCTAAAATAAAAT 57.254 32.000 17.22 0.00 0.00 1.82
168 175 8.717821 CATATCGGCGAGAATCCTAAAATAAAA 58.282 33.333 17.22 0.00 0.00 1.52
176 183 2.941453 GCATATCGGCGAGAATCCTA 57.059 50.000 17.22 1.35 0.00 2.94
187 194 3.186909 TCTTTCACTGAACGCATATCGG 58.813 45.455 0.00 0.00 43.86 4.18
193 200 1.792367 CGTCATCTTTCACTGAACGCA 59.208 47.619 0.00 0.00 0.00 5.24
194 201 1.792949 ACGTCATCTTTCACTGAACGC 59.207 47.619 0.00 0.00 0.00 4.84
195 202 4.452890 AAACGTCATCTTTCACTGAACG 57.547 40.909 0.00 0.00 0.00 3.95
204 211 3.181774 CAGTCGACGAAAACGTCATCTTT 59.818 43.478 19.64 0.00 38.68 2.52
205 212 2.724690 CAGTCGACGAAAACGTCATCTT 59.275 45.455 19.64 2.95 38.68 2.40
209 216 1.598676 CCTCAGTCGACGAAAACGTCA 60.599 52.381 19.64 7.05 38.68 4.35
217 224 2.677979 CGAGCACCTCAGTCGACGA 61.678 63.158 10.46 9.71 35.70 4.20
235 242 2.179427 ACACGTAAACCCTACCCCTAC 58.821 52.381 0.00 0.00 0.00 3.18
248 255 8.693504 GCGCTTATCTTATAAACATACACGTAA 58.306 33.333 0.00 0.00 0.00 3.18
251 258 7.334574 AGCGCTTATCTTATAAACATACACG 57.665 36.000 2.64 0.00 0.00 4.49
253 260 7.568679 CGCAAGCGCTTATCTTATAAACATACA 60.569 37.037 24.55 0.00 35.30 2.29
254 261 6.732392 CGCAAGCGCTTATCTTATAAACATAC 59.268 38.462 24.55 0.00 35.30 2.39
255 262 6.817396 CGCAAGCGCTTATCTTATAAACATA 58.183 36.000 24.55 0.00 35.30 2.29
256 263 5.679906 CGCAAGCGCTTATCTTATAAACAT 58.320 37.500 24.55 0.00 35.30 2.71
292 318 8.518702 GGCTCATCTTCAACTTCTTTTTAGAAT 58.481 33.333 0.00 0.00 0.00 2.40
293 319 7.307989 CGGCTCATCTTCAACTTCTTTTTAGAA 60.308 37.037 0.00 0.00 0.00 2.10
300 326 3.409026 ACGGCTCATCTTCAACTTCTT 57.591 42.857 0.00 0.00 0.00 2.52
302 328 5.607119 TTTAACGGCTCATCTTCAACTTC 57.393 39.130 0.00 0.00 0.00 3.01
316 342 2.344142 CACGCAATTGGAATTTAACGGC 59.656 45.455 7.72 0.00 0.00 5.68
327 353 0.533755 TTTTTGGGCCACGCAATTGG 60.534 50.000 5.23 0.00 36.27 3.16
365 391 6.365789 CCACGTATTTTTCAGTTGCATGATTT 59.634 34.615 0.00 0.00 0.00 2.17
366 392 5.863397 CCACGTATTTTTCAGTTGCATGATT 59.137 36.000 0.00 0.00 0.00 2.57
377 406 2.292016 CACACTGGCCACGTATTTTTCA 59.708 45.455 0.00 0.00 0.00 2.69
380 409 2.264005 TCACACTGGCCACGTATTTT 57.736 45.000 0.00 0.00 0.00 1.82
386 415 1.769733 CAAATTTCACACTGGCCACG 58.230 50.000 0.00 0.00 0.00 4.94
396 426 1.783416 CGTCTCGCTCGCAAATTTCAC 60.783 52.381 0.00 0.00 0.00 3.18
400 430 0.388649 ACTCGTCTCGCTCGCAAATT 60.389 50.000 0.00 0.00 0.00 1.82
427 457 1.881252 CGCGGACCCATTTCCTACG 60.881 63.158 0.00 0.00 32.88 3.51
553 586 1.152839 CCGGGTCAAAACAGGTGGT 60.153 57.895 0.00 0.00 0.00 4.16
623 659 1.810030 GAGAGCGCGTCCCGATTTT 60.810 57.895 8.43 0.00 40.02 1.82
813 861 1.858739 TTAAATCCCCCAGCTGCGGT 61.859 55.000 16.20 0.15 0.00 5.68
938 987 2.485795 GGAGATCGAGGCTCGCAGT 61.486 63.158 31.01 19.03 40.21 4.40
940 989 2.124109 AGGAGATCGAGGCTCGCA 60.124 61.111 31.01 19.92 40.21 5.10
941 990 2.642700 GAGGAGATCGAGGCTCGC 59.357 66.667 31.01 18.41 40.21 5.03
968 1017 3.127352 GACTAGCTCAGTCCGCCCG 62.127 68.421 10.52 0.00 46.94 6.13
1666 2003 8.998277 AGTATCAACCAGATATACAGTACAGT 57.002 34.615 0.00 0.00 41.10 3.55
1694 2031 4.676723 CGCCGGATTTGGTGTAATCAAAAT 60.677 41.667 5.05 0.00 37.60 1.82
1700 2037 0.393808 AGCGCCGGATTTGGTGTAAT 60.394 50.000 5.05 0.00 41.67 1.89
1866 2210 7.807977 ATAATCATTTAGTAGTTGTGCAGGG 57.192 36.000 0.00 0.00 0.00 4.45
1870 2214 8.826710 TGCTGTATAATCATTTAGTAGTTGTGC 58.173 33.333 0.00 0.00 0.00 4.57
1884 2228 9.494271 GGATAAAGAGAATGTGCTGTATAATCA 57.506 33.333 0.00 0.00 0.00 2.57
2115 2462 7.038587 AGGGAACATGCCAAAGTATATACGATA 60.039 37.037 7.23 0.00 0.00 2.92
2230 2581 8.347004 TGTAAATTTCAGATGCAATGTTAGGA 57.653 30.769 0.00 0.00 0.00 2.94
2487 2840 9.321562 CTGAGCAAAATAATATGAGGCATTTTT 57.678 29.630 0.00 0.00 30.27 1.94
2488 2841 7.929785 CCTGAGCAAAATAATATGAGGCATTTT 59.070 33.333 0.00 0.00 32.29 1.82
2489 2842 7.288389 TCCTGAGCAAAATAATATGAGGCATTT 59.712 33.333 0.00 0.00 0.00 2.32
2490 2843 6.779049 TCCTGAGCAAAATAATATGAGGCATT 59.221 34.615 0.00 0.00 0.00 3.56
2491 2844 6.309357 TCCTGAGCAAAATAATATGAGGCAT 58.691 36.000 0.00 0.00 0.00 4.40
2492 2845 5.693961 TCCTGAGCAAAATAATATGAGGCA 58.306 37.500 0.00 0.00 0.00 4.75
2493 2846 6.639632 TTCCTGAGCAAAATAATATGAGGC 57.360 37.500 0.00 0.00 0.00 4.70
2494 2847 9.472361 CATTTTCCTGAGCAAAATAATATGAGG 57.528 33.333 0.00 0.00 32.74 3.86
2500 2853 9.090692 CGATTTCATTTTCCTGAGCAAAATAAT 57.909 29.630 0.00 0.00 32.74 1.28
2501 2854 8.087750 ACGATTTCATTTTCCTGAGCAAAATAA 58.912 29.630 0.00 0.00 32.74 1.40
2505 2858 5.009510 TCACGATTTCATTTTCCTGAGCAAA 59.990 36.000 0.00 0.00 0.00 3.68
2509 2862 6.529125 CCAAATCACGATTTCATTTTCCTGAG 59.471 38.462 2.00 0.00 38.84 3.35
2548 2901 5.836024 ATAACTGTGTTCCCTGTTCCTTA 57.164 39.130 0.00 0.00 0.00 2.69
2552 2905 3.057526 GGCAATAACTGTGTTCCCTGTTC 60.058 47.826 0.00 0.00 0.00 3.18
2553 2906 2.890945 GGCAATAACTGTGTTCCCTGTT 59.109 45.455 0.00 0.00 0.00 3.16
2559 2912 5.236047 TGCAAAAATGGCAATAACTGTGTTC 59.764 36.000 0.00 0.00 38.54 3.18
2566 2919 4.745837 TTGCTGCAAAAATGGCAATAAC 57.254 36.364 13.51 0.00 41.39 1.89
2645 2998 9.844790 CAATGCAAGAAACAGTAGATTCAAATA 57.155 29.630 0.00 0.00 0.00 1.40
2696 3074 5.126396 TGAATCTACTGTATCCTGCATCG 57.874 43.478 0.00 0.00 0.00 3.84
2703 3081 8.607459 CATCAGTTGTTTGAATCTACTGTATCC 58.393 37.037 14.31 0.00 38.82 2.59
2704 3082 9.371136 TCATCAGTTGTTTGAATCTACTGTATC 57.629 33.333 14.31 0.00 38.82 2.24
2751 3131 9.684448 CGAATACAGAAATCTACACATATCTGT 57.316 33.333 10.61 10.61 46.52 3.41
2796 3259 1.043022 CCCATTGCAAGATTAGGCCC 58.957 55.000 4.94 0.00 0.00 5.80
2812 3275 2.665165 ACAAGAATGTCAGCAAACCCA 58.335 42.857 0.00 0.00 33.41 4.51
2815 3278 6.403636 CCATACCTACAAGAATGTCAGCAAAC 60.404 42.308 0.00 0.00 41.05 2.93
2824 3287 2.872245 CGCCACCATACCTACAAGAATG 59.128 50.000 0.00 0.00 0.00 2.67
2825 3288 2.158813 CCGCCACCATACCTACAAGAAT 60.159 50.000 0.00 0.00 0.00 2.40
2845 3316 1.364626 CGCTCTCATTGGTCAGTGCC 61.365 60.000 0.00 0.00 0.00 5.01
2857 3328 1.560004 CTTTGCTTGTCGCGCTCTCA 61.560 55.000 5.56 0.00 43.27 3.27
2866 3337 3.971032 AAGTACACTGCTTTGCTTGTC 57.029 42.857 0.00 0.00 30.60 3.18
2953 3424 5.455056 AAGTATCTGCTAATAGTGGTCCG 57.545 43.478 0.00 0.00 0.00 4.79
2984 3455 2.499197 TGCATTACGACCTTTCAGCAA 58.501 42.857 0.00 0.00 0.00 3.91
2986 3457 2.223340 CCATGCATTACGACCTTTCAGC 60.223 50.000 0.00 0.00 0.00 4.26
2987 3458 3.009723 ACCATGCATTACGACCTTTCAG 58.990 45.455 0.00 0.00 0.00 3.02
3004 3475 6.721208 CCTTGGCTAATTTATGTCCATACCAT 59.279 38.462 0.00 0.00 0.00 3.55
3025 3496 1.345741 TCCAGAGTCAGTTCTGCCTTG 59.654 52.381 0.00 0.00 42.58 3.61
3073 3544 5.298989 TGGTGACACAAACCTGTATAGTT 57.701 39.130 8.08 0.00 38.60 2.24
3132 3687 1.692411 AGCCAAAAACTCACCCAGAC 58.308 50.000 0.00 0.00 0.00 3.51
3138 3693 3.429881 GCTATGCAAAGCCAAAAACTCAC 59.570 43.478 0.00 0.00 36.45 3.51
3180 3735 3.482436 ACACCCTGCAATTTAGAAACGA 58.518 40.909 0.00 0.00 0.00 3.85
3181 3738 3.502211 AGACACCCTGCAATTTAGAAACG 59.498 43.478 0.00 0.00 0.00 3.60
3194 3752 0.394192 TTGACTGCAGAGACACCCTG 59.606 55.000 23.35 0.00 34.88 4.45
3448 4025 0.881796 GTACCAAGTTCCCTGCAAGC 59.118 55.000 0.00 0.00 0.00 4.01
3632 4210 1.745232 AACAGTGGAAACTCGCAACA 58.255 45.000 0.00 0.00 0.00 3.33
3636 4214 0.317854 GGCAAACAGTGGAAACTCGC 60.318 55.000 0.00 0.00 0.00 5.03
3637 4215 0.041312 CGGCAAACAGTGGAAACTCG 60.041 55.000 0.00 0.00 0.00 4.18
3638 4216 1.305201 TCGGCAAACAGTGGAAACTC 58.695 50.000 0.00 0.00 0.00 3.01
3639 4217 1.981256 ATCGGCAAACAGTGGAAACT 58.019 45.000 0.00 0.00 0.00 2.66
3640 4218 2.607038 GGAATCGGCAAACAGTGGAAAC 60.607 50.000 0.00 0.00 0.00 2.78
3641 4219 1.611491 GGAATCGGCAAACAGTGGAAA 59.389 47.619 0.00 0.00 0.00 3.13
3642 4220 1.202879 AGGAATCGGCAAACAGTGGAA 60.203 47.619 0.00 0.00 0.00 3.53
3648 4226 1.808411 GACAGAGGAATCGGCAAACA 58.192 50.000 0.00 0.00 0.00 2.83
3755 5620 1.536284 CCAACTCGGACGATAAGAGGC 60.536 57.143 0.00 0.00 36.56 4.70
3757 5622 1.841450 GCCAACTCGGACGATAAGAG 58.159 55.000 0.00 0.00 36.56 2.85
3775 5640 2.140717 GTTGTATATACAGGTGGGCGC 58.859 52.381 14.96 0.00 37.52 6.53
3986 6216 4.163078 ACAATCAGAGACTGAATAGTGGGG 59.837 45.833 5.57 0.00 44.04 4.96
4082 6314 2.232399 GGGGCTTGTTCGGTTTTCTTA 58.768 47.619 0.00 0.00 0.00 2.10
4091 6323 0.821711 TGGTCTTTGGGGCTTGTTCG 60.822 55.000 0.00 0.00 0.00 3.95
4125 6359 9.352191 GTCTCAAAACTATGTATCCTAGGTCTA 57.648 37.037 9.08 0.00 0.00 2.59
4160 6394 2.678336 CGGACTAATTTTCCACTGAGCC 59.322 50.000 6.60 0.00 31.94 4.70
4161 6395 3.335579 ACGGACTAATTTTCCACTGAGC 58.664 45.455 6.60 0.00 31.94 4.26
4167 6402 4.873827 GCAGTATGACGGACTAATTTTCCA 59.126 41.667 6.60 0.00 39.69 3.53
4168 6403 4.272748 GGCAGTATGACGGACTAATTTTCC 59.727 45.833 0.00 0.00 39.69 3.13
4234 9833 0.320334 TGATTCTCGGCTCGTTGCAA 60.320 50.000 0.00 0.00 45.15 4.08
4249 9848 7.883311 TCATGAAGATGATCATAGCACATGATT 59.117 33.333 25.72 8.58 37.96 2.57
4261 9860 9.322773 GTAAAGATGAACTCATGAAGATGATCA 57.677 33.333 0.00 0.00 37.97 2.92
4276 9875 4.503741 TGGCAAGCAAGTAAAGATGAAC 57.496 40.909 0.00 0.00 0.00 3.18
4289 9888 0.322816 GTCATCCCTCTTGGCAAGCA 60.323 55.000 22.31 10.33 0.00 3.91
4317 9916 1.469251 CCAAGTCCGTACACCAGATCG 60.469 57.143 0.00 0.00 0.00 3.69
4329 9928 3.254060 CAATACTCTCACACCAAGTCCG 58.746 50.000 0.00 0.00 0.00 4.79
4346 9945 4.551729 GCCAACGGCCTAGCAATA 57.448 55.556 0.00 0.00 44.06 1.90
4355 9954 4.025401 CACTTCCACGCCAACGGC 62.025 66.667 0.00 0.00 46.75 5.68
4425 10024 3.612860 CGAGTCTTGGGTATTTCACTTCG 59.387 47.826 0.00 0.00 0.00 3.79
4528 10127 4.639310 GCTTGGCCTATTAGGATGATGATG 59.361 45.833 14.16 0.00 37.67 3.07
4561 10162 2.493675 CACTGGGAAGATGAGTTCGAGA 59.506 50.000 0.00 0.00 0.00 4.04
4565 10166 2.354259 CTGCACTGGGAAGATGAGTTC 58.646 52.381 0.00 0.00 0.00 3.01
4566 10167 1.612726 GCTGCACTGGGAAGATGAGTT 60.613 52.381 0.00 0.00 0.00 3.01
4567 10168 0.035630 GCTGCACTGGGAAGATGAGT 60.036 55.000 0.00 0.00 0.00 3.41
4568 10169 0.035725 TGCTGCACTGGGAAGATGAG 60.036 55.000 0.00 0.00 0.00 2.90
4570 10171 1.471119 ATTGCTGCACTGGGAAGATG 58.529 50.000 0.00 0.00 0.00 2.90
4571 10172 2.507058 TCTATTGCTGCACTGGGAAGAT 59.493 45.455 0.00 0.00 0.00 2.40
4572 10173 1.908619 TCTATTGCTGCACTGGGAAGA 59.091 47.619 0.00 0.00 0.00 2.87
4573 10174 2.408271 TCTATTGCTGCACTGGGAAG 57.592 50.000 0.00 0.00 0.00 3.46
4574 10175 2.877097 TTCTATTGCTGCACTGGGAA 57.123 45.000 0.00 4.15 0.00 3.97
4575 10176 4.502105 TTATTCTATTGCTGCACTGGGA 57.498 40.909 0.00 0.00 0.00 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.