Multiple sequence alignment - TraesCS1D01G310100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G310100 chr1D 100.000 5807 0 0 1 5807 406131653 406125847 0.000000e+00 10724.0
1 TraesCS1D01G310100 chr1A 89.972 1795 85 39 2602 4355 501037570 501035830 0.000000e+00 2230.0
2 TraesCS1D01G310100 chr1A 89.423 728 38 18 4357 5070 501035765 501035063 0.000000e+00 881.0
3 TraesCS1D01G310100 chr1A 84.533 931 58 38 648 1544 501039553 501038675 0.000000e+00 843.0
4 TraesCS1D01G310100 chr1A 87.500 672 39 23 1934 2570 501038531 501037870 0.000000e+00 734.0
5 TraesCS1D01G310100 chr1A 91.968 498 26 8 1 496 501062876 501062391 0.000000e+00 686.0
6 TraesCS1D01G310100 chr1A 93.103 116 5 1 472 587 501062381 501062269 3.600000e-37 167.0
7 TraesCS1D01G310100 chr1A 88.776 98 5 1 5132 5223 501031647 501031550 1.320000e-21 115.0
8 TraesCS1D01G310100 chr1B 91.823 1541 70 18 2565 4095 546274206 546275700 0.000000e+00 2097.0
9 TraesCS1D01G310100 chr1B 88.140 1172 80 30 515 1655 546272187 546273330 0.000000e+00 1339.0
10 TraesCS1D01G310100 chr1B 89.603 529 33 17 4354 4865 546277344 546277867 0.000000e+00 652.0
11 TraesCS1D01G310100 chr1B 90.191 418 17 5 2174 2572 546273721 546274133 1.850000e-144 523.0
12 TraesCS1D01G310100 chr1B 90.201 398 26 6 43 429 546271731 546272126 1.870000e-139 507.0
13 TraesCS1D01G310100 chr1B 91.915 235 12 4 1936 2164 546273326 546273559 7.260000e-84 322.0
14 TraesCS1D01G310100 chr1B 91.489 235 11 3 4082 4308 546277025 546277258 1.210000e-81 315.0
15 TraesCS1D01G310100 chr1B 88.136 59 7 0 1148 1206 534738460 534738518 2.900000e-08 71.3
16 TraesCS1D01G310100 chr1B 100.000 34 0 0 415 448 546272142 546272175 4.860000e-06 63.9
17 TraesCS1D01G310100 chr3A 88.106 1732 124 45 2627 4336 382358662 382360333 0.000000e+00 1982.0
18 TraesCS1D01G310100 chr3A 89.435 549 50 6 4354 4896 382360405 382360951 0.000000e+00 686.0
19 TraesCS1D01G310100 chr3A 80.463 389 68 7 2896 3280 659527847 659528231 2.050000e-74 291.0
20 TraesCS1D01G310100 chr3A 92.857 98 7 0 1017 1114 382356329 382356426 6.070000e-30 143.0
21 TraesCS1D01G310100 chr3A 80.392 153 30 0 2656 2808 659527608 659527760 3.680000e-22 117.0
22 TraesCS1D01G310100 chr3A 78.528 163 24 7 858 1015 382356147 382356303 4.790000e-16 97.1
23 TraesCS1D01G310100 chr3A 81.944 72 6 2 4945 5016 382362426 382362490 3.000000e-03 54.7
24 TraesCS1D01G310100 chr3B 94.513 565 30 1 5244 5807 13049062 13048498 0.000000e+00 870.0
25 TraesCS1D01G310100 chr3B 93.816 566 34 1 5243 5807 769474639 769475204 0.000000e+00 850.0
26 TraesCS1D01G310100 chr3B 93.298 567 34 4 5244 5807 139041597 139042162 0.000000e+00 833.0
27 TraesCS1D01G310100 chr3B 92.069 580 43 2 5229 5807 769596564 769597141 0.000000e+00 813.0
28 TraesCS1D01G310100 chr3B 89.933 298 23 5 1655 1951 521646292 521646001 1.530000e-100 377.0
29 TraesCS1D01G310100 chr3B 79.897 388 72 5 2896 3280 693075362 693075746 4.430000e-71 279.0
30 TraesCS1D01G310100 chr7D 94.128 562 33 0 5246 5807 133682995 133682434 0.000000e+00 856.0
31 TraesCS1D01G310100 chrUn 92.933 566 39 1 5243 5807 114969545 114970110 0.000000e+00 822.0
32 TraesCS1D01G310100 chr5D 92.958 568 35 2 5241 5807 63473978 63474541 0.000000e+00 822.0
33 TraesCS1D01G310100 chr5D 80.156 257 30 7 57 308 544695007 544694767 7.740000e-39 172.0
34 TraesCS1D01G310100 chr5D 84.211 171 19 3 141 306 544721802 544721635 6.020000e-35 159.0
35 TraesCS1D01G310100 chr2D 92.895 563 37 3 5244 5805 631835233 631834673 0.000000e+00 815.0
36 TraesCS1D01G310100 chr2D 89.262 298 22 7 1655 1952 499108382 499108095 1.190000e-96 364.0
37 TraesCS1D01G310100 chr2B 92.119 571 44 1 5238 5807 791664277 791663707 0.000000e+00 804.0
38 TraesCS1D01G310100 chr2B 90.278 288 28 0 1654 1941 766885593 766885880 1.530000e-100 377.0
39 TraesCS1D01G310100 chr2B 89.931 288 23 4 1654 1941 766918856 766919137 3.310000e-97 366.0
40 TraesCS1D01G310100 chr5B 90.625 288 23 3 1654 1941 516403826 516403543 4.250000e-101 379.0
41 TraesCS1D01G310100 chr5B 84.825 257 31 5 57 308 687167659 687167912 9.660000e-63 252.0
42 TraesCS1D01G310100 chr3D 90.592 287 25 1 1655 1941 45810128 45809844 4.250000e-101 379.0
43 TraesCS1D01G310100 chr3D 90.034 291 18 5 1654 1944 481211825 481211546 3.310000e-97 366.0
44 TraesCS1D01G310100 chr3D 80.670 388 69 5 2896 3280 525334540 525334924 4.400000e-76 296.0
45 TraesCS1D01G310100 chr2A 90.244 287 24 2 1655 1941 171640531 171640813 7.110000e-99 372.0
46 TraesCS1D01G310100 chr6D 90.244 287 19 3 1654 1939 78518713 78518991 3.310000e-97 366.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G310100 chr1D 406125847 406131653 5806 True 10724.0000 10724 100.00000 1 5807 1 chr1D.!!$R1 5806
1 TraesCS1D01G310100 chr1A 501031550 501039553 8003 True 960.6000 2230 88.04080 648 5223 5 chr1A.!!$R1 4575
2 TraesCS1D01G310100 chr1A 501062269 501062876 607 True 426.5000 686 92.53550 1 587 2 chr1A.!!$R2 586
3 TraesCS1D01G310100 chr1B 546271731 546277867 6136 False 727.3625 2097 91.67025 43 4865 8 chr1B.!!$F2 4822
4 TraesCS1D01G310100 chr3A 382356147 382362490 6343 False 592.5600 1982 86.17400 858 5016 5 chr3A.!!$F1 4158
5 TraesCS1D01G310100 chr3A 659527608 659528231 623 False 204.0000 291 80.42750 2656 3280 2 chr3A.!!$F2 624
6 TraesCS1D01G310100 chr3B 13048498 13049062 564 True 870.0000 870 94.51300 5244 5807 1 chr3B.!!$R1 563
7 TraesCS1D01G310100 chr3B 769474639 769475204 565 False 850.0000 850 93.81600 5243 5807 1 chr3B.!!$F3 564
8 TraesCS1D01G310100 chr3B 139041597 139042162 565 False 833.0000 833 93.29800 5244 5807 1 chr3B.!!$F1 563
9 TraesCS1D01G310100 chr3B 769596564 769597141 577 False 813.0000 813 92.06900 5229 5807 1 chr3B.!!$F4 578
10 TraesCS1D01G310100 chr7D 133682434 133682995 561 True 856.0000 856 94.12800 5246 5807 1 chr7D.!!$R1 561
11 TraesCS1D01G310100 chrUn 114969545 114970110 565 False 822.0000 822 92.93300 5243 5807 1 chrUn.!!$F1 564
12 TraesCS1D01G310100 chr5D 63473978 63474541 563 False 822.0000 822 92.95800 5241 5807 1 chr5D.!!$F1 566
13 TraesCS1D01G310100 chr2D 631834673 631835233 560 True 815.0000 815 92.89500 5244 5805 1 chr2D.!!$R2 561
14 TraesCS1D01G310100 chr2B 791663707 791664277 570 True 804.0000 804 92.11900 5238 5807 1 chr2B.!!$R1 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
867 972 0.037232 AGGAAGAACGCTGTAGCCAC 60.037 55.0 0.00 0.00 37.91 5.01 F
2154 3872 0.665835 TGTTGCTACCGCCAAAACAG 59.334 50.0 0.00 0.00 34.43 3.16 F
3379 5637 0.389391 ACTCAACCTGTCCTCACGTG 59.611 55.0 9.94 9.94 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2845 5090 0.313672 TTGCCAGGCAATTTGTCGAC 59.686 50.0 23.88 9.11 43.99 4.20 R
3481 5750 0.451628 CATTTGTGCTCACGCTGTCG 60.452 55.0 0.00 0.00 42.43 4.35 R
5104 10856 0.397816 CCTGTCACCTCCTCCTAGGG 60.398 65.0 9.46 0.00 41.32 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 0.663153 GCGCCCTACATGATGTTTCC 59.337 55.000 2.29 0.00 0.00 3.13
175 176 6.201806 CCATCTCGAATTTGTCTATCAGTTCC 59.798 42.308 0.00 0.00 0.00 3.62
283 285 2.771089 TCGTCTGCAAATTCAGAGCTT 58.229 42.857 0.00 0.00 43.10 3.74
318 320 3.850173 ACCTTATAAACTGAGCAGGGGAA 59.150 43.478 2.20 0.00 0.00 3.97
451 492 3.317603 CAAATCGGTTGGCCTCAATTT 57.682 42.857 3.32 5.05 35.10 1.82
452 493 3.663025 CAAATCGGTTGGCCTCAATTTT 58.337 40.909 3.32 0.00 35.10 1.82
454 495 5.418676 CAAATCGGTTGGCCTCAATTTTAT 58.581 37.500 3.32 0.00 35.10 1.40
455 496 5.675684 AATCGGTTGGCCTCAATTTTATT 57.324 34.783 3.32 0.00 35.10 1.40
458 499 5.474825 TCGGTTGGCCTCAATTTTATTTTC 58.525 37.500 3.32 0.00 35.10 2.29
459 500 5.245075 TCGGTTGGCCTCAATTTTATTTTCT 59.755 36.000 3.32 0.00 35.10 2.52
460 501 5.348451 CGGTTGGCCTCAATTTTATTTTCTG 59.652 40.000 3.32 0.00 35.10 3.02
461 502 6.463360 GGTTGGCCTCAATTTTATTTTCTGA 58.537 36.000 3.32 0.00 35.10 3.27
462 503 6.591448 GGTTGGCCTCAATTTTATTTTCTGAG 59.409 38.462 3.32 0.00 35.10 3.35
463 504 7.378181 GTTGGCCTCAATTTTATTTTCTGAGA 58.622 34.615 3.32 0.00 36.44 3.27
464 505 7.537596 TGGCCTCAATTTTATTTTCTGAGAA 57.462 32.000 3.32 0.00 36.44 2.87
465 506 7.961351 TGGCCTCAATTTTATTTTCTGAGAAA 58.039 30.769 3.32 3.02 36.44 2.52
467 508 9.091784 GGCCTCAATTTTATTTTCTGAGAAATC 57.908 33.333 8.64 0.00 36.44 2.17
503 573 2.290960 GGTTGGCCTCAATTGACCTAGT 60.291 50.000 14.35 0.00 35.10 2.57
504 574 3.054655 GGTTGGCCTCAATTGACCTAGTA 60.055 47.826 14.35 0.00 35.10 1.82
505 575 4.192317 GTTGGCCTCAATTGACCTAGTAG 58.808 47.826 14.35 0.12 35.10 2.57
587 657 5.573380 TCAAGCTGGGCTATCATTAATCT 57.427 39.130 0.00 0.00 38.25 2.40
588 658 5.945310 TCAAGCTGGGCTATCATTAATCTT 58.055 37.500 0.00 0.00 38.25 2.40
589 659 7.078249 TCAAGCTGGGCTATCATTAATCTTA 57.922 36.000 0.00 0.00 38.25 2.10
592 662 7.507797 AGCTGGGCTATCATTAATCTTATCT 57.492 36.000 0.00 0.00 36.99 1.98
594 664 9.051259 AGCTGGGCTATCATTAATCTTATCTAA 57.949 33.333 0.00 0.00 36.99 2.10
630 700 2.959507 ATTTTTCGGCCATTAGCACC 57.040 45.000 2.24 0.00 46.50 5.01
646 716 6.845758 TTAGCACCTGTACAGTACACTAAT 57.154 37.500 21.18 2.22 34.46 1.73
661 760 7.326305 CAGTACACTAATGTATACCATTCGCTC 59.674 40.741 0.00 0.00 43.21 5.03
662 761 5.539048 ACACTAATGTATACCATTCGCTCC 58.461 41.667 0.00 0.00 42.81 4.70
714 816 4.474651 TCTTCCCCTGCTATCTCATCAAAA 59.525 41.667 0.00 0.00 0.00 2.44
715 817 4.428294 TCCCCTGCTATCTCATCAAAAG 57.572 45.455 0.00 0.00 0.00 2.27
716 818 3.137176 TCCCCTGCTATCTCATCAAAAGG 59.863 47.826 0.00 0.00 0.00 3.11
809 912 2.106684 AGAGAGTTTTCAAGTCCCACCC 59.893 50.000 0.00 0.00 0.00 4.61
811 914 0.549469 AGTTTTCAAGTCCCACCCGT 59.451 50.000 0.00 0.00 0.00 5.28
853 958 5.177696 CCAGACTGTTCTAAAACGAAGGAAG 59.822 44.000 0.93 0.00 38.28 3.46
867 972 0.037232 AGGAAGAACGCTGTAGCCAC 60.037 55.000 0.00 0.00 37.91 5.01
873 978 3.112075 CGCTGTAGCCACACACCG 61.112 66.667 0.00 0.00 37.91 4.94
874 979 2.342279 GCTGTAGCCACACACCGA 59.658 61.111 0.00 0.00 34.31 4.69
918 1027 4.238514 CTCAAGTTCTACAAGACCTTCCG 58.761 47.826 0.00 0.00 23.11 4.30
921 1030 3.771216 AGTTCTACAAGACCTTCCGGTA 58.229 45.455 0.00 0.00 45.73 4.02
923 1032 2.097825 TCTACAAGACCTTCCGGTAGC 58.902 52.381 0.00 0.00 45.73 3.58
954 1063 2.426522 CAGAAAGATTGACCGGCAGAA 58.573 47.619 0.00 0.00 0.00 3.02
961 1070 2.112297 GACCGGCAGAACCAACCA 59.888 61.111 0.00 0.00 39.03 3.67
985 1099 2.682856 TCAAGGTTGTGTTGCTGAGTTC 59.317 45.455 0.00 0.00 0.00 3.01
1021 1156 1.596934 GGGAGCAACGAGATGGTGA 59.403 57.895 0.00 0.00 0.00 4.02
1114 1252 5.030295 CGTCATGATCAATTAGTTTGTGCC 58.970 41.667 0.00 0.00 36.65 5.01
1115 1253 5.391843 CGTCATGATCAATTAGTTTGTGCCA 60.392 40.000 0.00 0.00 36.65 4.92
1122 1260 6.403866 TCAATTAGTTTGTGCCAGTGAAAT 57.596 33.333 0.00 0.00 36.65 2.17
1199 1372 0.942410 TTCCCTTTGTCGTCTTCGCG 60.942 55.000 0.00 0.00 36.96 5.87
1271 2920 2.386661 AGCAATCAGTACGTCCCAAG 57.613 50.000 0.00 0.00 0.00 3.61
1422 3089 4.868171 GCCGTACAAAATCTACATGACTCA 59.132 41.667 0.00 0.00 0.00 3.41
1433 3100 3.541996 ACATGACTCAGTGTTGTGTGA 57.458 42.857 0.00 0.00 31.58 3.58
1507 3175 2.795329 AGCCATGGTTGACTTTGTAGG 58.205 47.619 14.67 0.00 0.00 3.18
1508 3176 1.818674 GCCATGGTTGACTTTGTAGGG 59.181 52.381 14.67 0.00 0.00 3.53
1511 3179 3.496331 CATGGTTGACTTTGTAGGGGTT 58.504 45.455 0.00 0.00 0.00 4.11
1548 3256 9.145865 GGAAGACTATAGTTTCTTTTCTGACAG 57.854 37.037 6.88 0.00 32.04 3.51
1655 3364 1.744320 GCCGAACCAAGTTGGCCTTT 61.744 55.000 22.25 8.90 42.67 3.11
1657 3366 1.539827 CCGAACCAAGTTGGCCTTTAG 59.460 52.381 22.25 9.05 42.67 1.85
1658 3367 1.539827 CGAACCAAGTTGGCCTTTAGG 59.460 52.381 22.25 1.96 42.67 2.69
1671 3380 2.292267 CCTTTAGGCTGTGCATAGTGG 58.708 52.381 12.41 2.16 0.00 4.00
1672 3381 2.292267 CTTTAGGCTGTGCATAGTGGG 58.708 52.381 12.41 0.00 0.00 4.61
1673 3382 1.578897 TTAGGCTGTGCATAGTGGGA 58.421 50.000 12.41 0.00 0.00 4.37
1674 3383 1.123077 TAGGCTGTGCATAGTGGGAG 58.877 55.000 12.41 0.00 0.00 4.30
1675 3384 0.911525 AGGCTGTGCATAGTGGGAGT 60.912 55.000 12.41 0.00 0.00 3.85
1676 3385 0.830648 GGCTGTGCATAGTGGGAGTA 59.169 55.000 12.41 0.00 0.00 2.59
1677 3386 1.209504 GGCTGTGCATAGTGGGAGTAA 59.790 52.381 12.41 0.00 0.00 2.24
1678 3387 2.158755 GGCTGTGCATAGTGGGAGTAAT 60.159 50.000 12.41 0.00 0.00 1.89
1679 3388 3.071023 GGCTGTGCATAGTGGGAGTAATA 59.929 47.826 12.41 0.00 0.00 0.98
1680 3389 4.263068 GGCTGTGCATAGTGGGAGTAATAT 60.263 45.833 12.41 0.00 0.00 1.28
1681 3390 5.046591 GGCTGTGCATAGTGGGAGTAATATA 60.047 44.000 12.41 0.00 0.00 0.86
1682 3391 6.464222 GCTGTGCATAGTGGGAGTAATATAA 58.536 40.000 12.41 0.00 0.00 0.98
1683 3392 6.369065 GCTGTGCATAGTGGGAGTAATATAAC 59.631 42.308 12.41 0.00 0.00 1.89
1684 3393 6.765403 TGTGCATAGTGGGAGTAATATAACC 58.235 40.000 0.00 0.00 0.00 2.85
1685 3394 5.867716 GTGCATAGTGGGAGTAATATAACCG 59.132 44.000 0.00 0.00 0.00 4.44
1686 3395 5.046878 TGCATAGTGGGAGTAATATAACCGG 60.047 44.000 0.00 0.00 0.00 5.28
1687 3396 5.046807 GCATAGTGGGAGTAATATAACCGGT 60.047 44.000 0.00 0.00 0.00 5.28
1688 3397 6.153340 GCATAGTGGGAGTAATATAACCGGTA 59.847 42.308 8.00 0.00 0.00 4.02
1689 3398 7.309990 GCATAGTGGGAGTAATATAACCGGTAA 60.310 40.741 8.00 0.00 0.00 2.85
1690 3399 6.410942 AGTGGGAGTAATATAACCGGTAAC 57.589 41.667 8.00 0.00 0.00 2.50
1691 3400 5.898972 AGTGGGAGTAATATAACCGGTAACA 59.101 40.000 8.00 0.00 0.00 2.41
1692 3401 6.556116 AGTGGGAGTAATATAACCGGTAACAT 59.444 38.462 8.00 4.33 0.00 2.71
1693 3402 6.647895 GTGGGAGTAATATAACCGGTAACATG 59.352 42.308 8.00 0.00 0.00 3.21
1694 3403 5.640783 GGGAGTAATATAACCGGTAACATGC 59.359 44.000 8.00 0.00 0.00 4.06
1695 3404 6.225318 GGAGTAATATAACCGGTAACATGCA 58.775 40.000 8.00 0.00 0.00 3.96
1696 3405 6.146673 GGAGTAATATAACCGGTAACATGCAC 59.853 42.308 8.00 0.85 0.00 4.57
1697 3406 6.823497 AGTAATATAACCGGTAACATGCACT 58.177 36.000 8.00 3.49 0.00 4.40
1698 3407 7.277396 AGTAATATAACCGGTAACATGCACTT 58.723 34.615 8.00 0.00 0.00 3.16
1699 3408 6.371809 AATATAACCGGTAACATGCACTTG 57.628 37.500 8.00 0.00 0.00 3.16
1700 3409 1.975660 AACCGGTAACATGCACTTGT 58.024 45.000 8.00 0.00 0.00 3.16
1701 3410 1.234821 ACCGGTAACATGCACTTGTG 58.765 50.000 4.49 0.00 0.00 3.33
1702 3411 1.202710 ACCGGTAACATGCACTTGTGA 60.203 47.619 4.49 0.00 0.00 3.58
1703 3412 1.196808 CCGGTAACATGCACTTGTGAC 59.803 52.381 4.79 0.00 31.15 3.67
1704 3413 2.143122 CGGTAACATGCACTTGTGACT 58.857 47.619 7.69 0.00 32.38 3.41
1705 3414 3.322369 CGGTAACATGCACTTGTGACTA 58.678 45.455 7.69 0.00 32.38 2.59
1706 3415 3.743911 CGGTAACATGCACTTGTGACTAA 59.256 43.478 7.69 0.00 32.38 2.24
1707 3416 4.377022 CGGTAACATGCACTTGTGACTAAC 60.377 45.833 7.69 0.00 32.38 2.34
1708 3417 4.513692 GGTAACATGCACTTGTGACTAACA 59.486 41.667 7.69 0.00 32.38 2.41
1709 3418 5.008217 GGTAACATGCACTTGTGACTAACAA 59.992 40.000 7.69 0.00 46.66 2.83
1721 3430 6.875948 TGTGACTAACAAACATGCTTATGT 57.124 33.333 0.00 0.00 35.24 2.29
1722 3431 6.667370 TGTGACTAACAAACATGCTTATGTG 58.333 36.000 0.00 0.00 35.24 3.21
1723 3432 6.086222 GTGACTAACAAACATGCTTATGTGG 58.914 40.000 0.00 0.00 34.56 4.17
1724 3433 5.059404 ACTAACAAACATGCTTATGTGGC 57.941 39.130 0.00 0.00 34.56 5.01
1725 3434 4.522405 ACTAACAAACATGCTTATGTGGCA 59.478 37.500 0.00 0.00 44.05 4.92
1726 3435 3.302365 ACAAACATGCTTATGTGGCAC 57.698 42.857 11.55 11.55 42.69 5.01
1727 3436 2.627221 ACAAACATGCTTATGTGGCACA 59.373 40.909 24.36 24.36 42.69 4.57
1743 3452 5.885230 TGGCACACAATTAAATGAGAGAG 57.115 39.130 0.00 0.00 0.00 3.20
1744 3453 5.559770 TGGCACACAATTAAATGAGAGAGA 58.440 37.500 0.00 0.00 0.00 3.10
1745 3454 5.645067 TGGCACACAATTAAATGAGAGAGAG 59.355 40.000 0.00 0.00 0.00 3.20
1746 3455 5.877012 GGCACACAATTAAATGAGAGAGAGA 59.123 40.000 0.00 0.00 0.00 3.10
1747 3456 6.036953 GGCACACAATTAAATGAGAGAGAGAG 59.963 42.308 0.00 0.00 0.00 3.20
1748 3457 6.036953 GCACACAATTAAATGAGAGAGAGAGG 59.963 42.308 0.00 0.00 0.00 3.69
1749 3458 6.538021 CACACAATTAAATGAGAGAGAGAGGG 59.462 42.308 0.00 0.00 0.00 4.30
1750 3459 6.214412 ACACAATTAAATGAGAGAGAGAGGGT 59.786 38.462 0.00 0.00 0.00 4.34
1751 3460 7.108847 CACAATTAAATGAGAGAGAGAGGGTT 58.891 38.462 0.00 0.00 0.00 4.11
1752 3461 8.260818 CACAATTAAATGAGAGAGAGAGGGTTA 58.739 37.037 0.00 0.00 0.00 2.85
1753 3462 8.482128 ACAATTAAATGAGAGAGAGAGGGTTAG 58.518 37.037 0.00 0.00 0.00 2.34
1754 3463 8.700051 CAATTAAATGAGAGAGAGAGGGTTAGA 58.300 37.037 0.00 0.00 0.00 2.10
1755 3464 7.648039 TTAAATGAGAGAGAGAGGGTTAGAC 57.352 40.000 0.00 0.00 0.00 2.59
1756 3465 3.655615 TGAGAGAGAGAGGGTTAGACC 57.344 52.381 0.00 0.00 37.60 3.85
1757 3466 2.092861 TGAGAGAGAGAGGGTTAGACCG 60.093 54.545 0.00 0.00 39.83 4.79
1758 3467 1.917568 AGAGAGAGAGGGTTAGACCGT 59.082 52.381 0.00 0.00 39.83 4.83
1759 3468 2.309458 AGAGAGAGAGGGTTAGACCGTT 59.691 50.000 0.00 0.00 39.83 4.44
1760 3469 3.522750 AGAGAGAGAGGGTTAGACCGTTA 59.477 47.826 0.00 0.00 39.83 3.18
1761 3470 3.878699 GAGAGAGAGGGTTAGACCGTTAG 59.121 52.174 0.00 0.00 39.83 2.34
1762 3471 3.522750 AGAGAGAGGGTTAGACCGTTAGA 59.477 47.826 0.00 0.00 39.83 2.10
1763 3472 3.878699 GAGAGAGGGTTAGACCGTTAGAG 59.121 52.174 0.00 0.00 39.83 2.43
1764 3473 3.266513 AGAGAGGGTTAGACCGTTAGAGT 59.733 47.826 0.00 0.00 39.83 3.24
1765 3474 4.472833 AGAGAGGGTTAGACCGTTAGAGTA 59.527 45.833 0.00 0.00 39.83 2.59
1766 3475 5.045286 AGAGAGGGTTAGACCGTTAGAGTAA 60.045 44.000 0.00 0.00 39.83 2.24
1767 3476 4.946772 AGAGGGTTAGACCGTTAGAGTAAC 59.053 45.833 0.00 0.00 39.83 2.50
1768 3477 4.666512 AGGGTTAGACCGTTAGAGTAACA 58.333 43.478 0.00 0.00 39.83 2.41
1769 3478 5.267587 AGGGTTAGACCGTTAGAGTAACAT 58.732 41.667 0.00 0.00 39.83 2.71
1770 3479 6.426587 AGGGTTAGACCGTTAGAGTAACATA 58.573 40.000 0.00 0.00 39.83 2.29
1771 3480 6.545298 AGGGTTAGACCGTTAGAGTAACATAG 59.455 42.308 0.00 0.00 39.83 2.23
1772 3481 6.238869 GGGTTAGACCGTTAGAGTAACATAGG 60.239 46.154 0.00 0.00 39.83 2.57
1773 3482 6.319911 GGTTAGACCGTTAGAGTAACATAGGT 59.680 42.308 0.00 0.00 38.57 3.08
1774 3483 7.499232 GGTTAGACCGTTAGAGTAACATAGGTA 59.501 40.741 0.00 0.00 38.57 3.08
1775 3484 8.555361 GTTAGACCGTTAGAGTAACATAGGTAG 58.445 40.741 0.00 0.00 38.57 3.18
1776 3485 6.893583 AGACCGTTAGAGTAACATAGGTAGA 58.106 40.000 0.00 0.00 38.57 2.59
1777 3486 7.516452 AGACCGTTAGAGTAACATAGGTAGAT 58.484 38.462 0.00 0.00 38.57 1.98
1778 3487 8.654997 AGACCGTTAGAGTAACATAGGTAGATA 58.345 37.037 0.00 0.00 38.57 1.98
1779 3488 8.614469 ACCGTTAGAGTAACATAGGTAGATAC 57.386 38.462 0.00 0.00 38.57 2.24
1780 3489 7.663493 ACCGTTAGAGTAACATAGGTAGATACC 59.337 40.741 0.43 0.43 41.39 2.73
1781 3490 7.663081 CCGTTAGAGTAACATAGGTAGATACCA 59.337 40.741 11.51 0.00 42.48 3.25
1782 3491 9.228949 CGTTAGAGTAACATAGGTAGATACCAT 57.771 37.037 11.51 0.89 42.48 3.55
1810 3519 9.838975 TCATGTTAAATGTTATGCTACTTTGTG 57.161 29.630 0.00 0.00 0.00 3.33
1811 3520 9.624697 CATGTTAAATGTTATGCTACTTTGTGT 57.375 29.630 0.00 0.00 0.00 3.72
1812 3521 9.840427 ATGTTAAATGTTATGCTACTTTGTGTC 57.160 29.630 0.00 0.00 0.00 3.67
1813 3522 8.841300 TGTTAAATGTTATGCTACTTTGTGTCA 58.159 29.630 0.00 0.00 0.00 3.58
1814 3523 9.840427 GTTAAATGTTATGCTACTTTGTGTCAT 57.160 29.630 0.00 0.00 0.00 3.06
1815 3524 9.838975 TTAAATGTTATGCTACTTTGTGTCATG 57.161 29.630 0.00 0.00 0.00 3.07
1816 3525 5.295431 TGTTATGCTACTTTGTGTCATGC 57.705 39.130 0.00 0.00 0.00 4.06
1817 3526 4.759183 TGTTATGCTACTTTGTGTCATGCA 59.241 37.500 0.00 0.00 35.34 3.96
1818 3527 5.415389 TGTTATGCTACTTTGTGTCATGCAT 59.585 36.000 0.00 0.00 40.50 3.96
1819 3528 3.835378 TGCTACTTTGTGTCATGCATG 57.165 42.857 21.07 21.07 0.00 4.06
1820 3529 3.410508 TGCTACTTTGTGTCATGCATGA 58.589 40.909 25.42 25.42 0.00 3.07
1887 3596 9.363401 TGCACTATAAAGGTAGTATCATACACT 57.637 33.333 0.00 0.00 33.29 3.55
1895 3604 8.688747 AAGGTAGTATCATACACTAGTACCAC 57.311 38.462 11.09 0.00 42.59 4.16
1896 3605 7.809238 AGGTAGTATCATACACTAGTACCACA 58.191 38.462 11.09 0.00 42.59 4.17
1897 3606 8.446394 AGGTAGTATCATACACTAGTACCACAT 58.554 37.037 11.09 0.00 42.59 3.21
1898 3607 8.512956 GGTAGTATCATACACTAGTACCACATG 58.487 40.741 0.00 0.00 40.98 3.21
1899 3608 6.982852 AGTATCATACACTAGTACCACATGC 58.017 40.000 0.00 0.00 31.96 4.06
1900 3609 5.869649 ATCATACACTAGTACCACATGCA 57.130 39.130 0.00 0.00 31.96 3.96
1901 3610 5.869649 TCATACACTAGTACCACATGCAT 57.130 39.130 0.00 0.00 31.96 3.96
1902 3611 5.600696 TCATACACTAGTACCACATGCATG 58.399 41.667 25.09 25.09 31.96 4.06
1903 3612 5.362430 TCATACACTAGTACCACATGCATGA 59.638 40.000 32.75 7.78 31.96 3.07
1904 3613 4.760530 ACACTAGTACCACATGCATGAT 57.239 40.909 32.75 18.78 0.00 2.45
1905 3614 4.445453 ACACTAGTACCACATGCATGATG 58.555 43.478 32.75 23.69 38.15 3.07
1906 3615 3.249320 CACTAGTACCACATGCATGATGC 59.751 47.826 32.75 19.21 45.29 3.91
1907 3616 2.723322 AGTACCACATGCATGATGCT 57.277 45.000 32.75 20.93 45.31 3.79
1908 3617 3.843893 AGTACCACATGCATGATGCTA 57.156 42.857 32.75 14.91 45.31 3.49
1909 3618 3.470709 AGTACCACATGCATGATGCTAC 58.529 45.455 32.75 23.25 45.31 3.58
1910 3619 2.723322 ACCACATGCATGATGCTACT 57.277 45.000 32.75 5.74 45.31 2.57
1911 3620 3.843893 ACCACATGCATGATGCTACTA 57.156 42.857 32.75 0.00 45.31 1.82
1912 3621 4.362470 ACCACATGCATGATGCTACTAT 57.638 40.909 32.75 4.13 45.31 2.12
1913 3622 5.488262 ACCACATGCATGATGCTACTATA 57.512 39.130 32.75 0.00 45.31 1.31
1914 3623 6.058553 ACCACATGCATGATGCTACTATAT 57.941 37.500 32.75 2.76 45.31 0.86
1915 3624 5.878669 ACCACATGCATGATGCTACTATATG 59.121 40.000 32.75 15.00 45.31 1.78
1916 3625 6.110707 CCACATGCATGATGCTACTATATGA 58.889 40.000 32.75 0.00 45.31 2.15
1917 3626 6.766467 CCACATGCATGATGCTACTATATGAT 59.234 38.462 32.75 1.36 45.31 2.45
1918 3627 7.929785 CCACATGCATGATGCTACTATATGATA 59.070 37.037 32.75 0.00 45.31 2.15
1919 3628 8.762426 CACATGCATGATGCTACTATATGATAC 58.238 37.037 32.75 0.00 45.31 2.24
1920 3629 8.702819 ACATGCATGATGCTACTATATGATACT 58.297 33.333 32.75 0.22 45.31 2.12
1921 3630 9.194271 CATGCATGATGCTACTATATGATACTC 57.806 37.037 22.59 0.00 45.31 2.59
1922 3631 7.720442 TGCATGATGCTACTATATGATACTCC 58.280 38.462 19.19 0.00 45.31 3.85
1923 3632 7.151308 GCATGATGCTACTATATGATACTCCC 58.849 42.308 10.72 0.00 40.96 4.30
1924 3633 7.665690 CATGATGCTACTATATGATACTCCCC 58.334 42.308 0.00 0.00 0.00 4.81
1925 3634 6.741724 TGATGCTACTATATGATACTCCCCA 58.258 40.000 0.00 0.00 0.00 4.96
1926 3635 6.607600 TGATGCTACTATATGATACTCCCCAC 59.392 42.308 0.00 0.00 0.00 4.61
1927 3636 6.153942 TGCTACTATATGATACTCCCCACT 57.846 41.667 0.00 0.00 0.00 4.00
1928 3637 7.280044 TGCTACTATATGATACTCCCCACTA 57.720 40.000 0.00 0.00 0.00 2.74
1929 3638 7.883823 TGCTACTATATGATACTCCCCACTAT 58.116 38.462 0.00 0.00 0.00 2.12
1930 3639 7.780271 TGCTACTATATGATACTCCCCACTATG 59.220 40.741 0.00 0.00 0.00 2.23
1931 3640 7.999545 GCTACTATATGATACTCCCCACTATGA 59.000 40.741 0.00 0.00 0.00 2.15
1932 3641 9.567776 CTACTATATGATACTCCCCACTATGAG 57.432 40.741 0.00 0.00 34.73 2.90
1933 3642 7.945278 ACTATATGATACTCCCCACTATGAGT 58.055 38.462 0.00 0.00 43.85 3.41
1934 3643 9.070210 ACTATATGATACTCCCCACTATGAGTA 57.930 37.037 2.23 2.23 45.36 2.59
1935 3644 9.567776 CTATATGATACTCCCCACTATGAGTAG 57.432 40.741 5.70 0.00 44.72 2.57
1936 3645 4.408276 TGATACTCCCCACTATGAGTAGC 58.592 47.826 7.72 7.72 45.86 3.58
1937 3646 2.089600 ACTCCCCACTATGAGTAGCC 57.910 55.000 0.00 0.00 39.96 3.93
1938 3647 1.576272 ACTCCCCACTATGAGTAGCCT 59.424 52.381 0.00 0.00 39.96 4.58
1939 3648 2.022918 ACTCCCCACTATGAGTAGCCTT 60.023 50.000 0.00 0.00 39.96 4.35
1962 3671 0.950836 TGCATGGTGTTTTCGACCAG 59.049 50.000 0.00 0.00 46.66 4.00
1964 3673 2.147958 GCATGGTGTTTTCGACCAGTA 58.852 47.619 0.00 0.00 46.66 2.74
2012 3721 3.062909 GCATCACGGTATAAACGCAAAGA 59.937 43.478 0.00 0.00 34.00 2.52
2039 3748 8.538409 ACTGAAATTAAATTTGATTGTGGCTC 57.462 30.769 8.78 3.81 31.47 4.70
2154 3872 0.665835 TGTTGCTACCGCCAAAACAG 59.334 50.000 0.00 0.00 34.43 3.16
2168 3886 7.285401 ACCGCCAAAACAGATATGAGAAATAAT 59.715 33.333 0.00 0.00 0.00 1.28
2299 4173 4.805192 TGTCTTTCTTGACTTTGCAAATGC 59.195 37.500 13.23 8.32 38.43 3.56
2366 4240 2.027385 GTGGATGAAGCCCAGAAATCC 58.973 52.381 0.00 0.00 37.83 3.01
2367 4241 1.063717 TGGATGAAGCCCAGAAATCCC 60.064 52.381 0.00 0.00 36.72 3.85
2416 4339 1.604278 GGCCAAAGTTGTCTCTGTCAC 59.396 52.381 0.00 0.00 0.00 3.67
2507 4430 7.936847 TCCCATAACTTACAGAATTATTGCGAT 59.063 33.333 0.00 0.00 0.00 4.58
2508 4431 8.567948 CCCATAACTTACAGAATTATTGCGATT 58.432 33.333 0.00 0.00 0.00 3.34
2509 4432 9.599322 CCATAACTTACAGAATTATTGCGATTC 57.401 33.333 0.00 0.00 34.48 2.52
2510 4433 9.306280 CATAACTTACAGAATTATTGCGATTCG 57.694 33.333 0.62 0.62 38.29 3.34
2511 4434 7.534085 AACTTACAGAATTATTGCGATTCGA 57.466 32.000 10.88 0.00 38.29 3.71
2551 4474 3.088532 TGATTTCTAATTGCCGCCACTT 58.911 40.909 0.00 0.00 0.00 3.16
2601 4798 2.110213 TCGACTGGTGGCCACAAC 59.890 61.111 35.78 20.74 33.91 3.32
2602 4799 2.978010 CGACTGGTGGCCACAACC 60.978 66.667 35.78 20.63 31.62 3.77
2647 4891 2.228822 GTGATTTGCTGGTGGATTTCGT 59.771 45.455 0.00 0.00 0.00 3.85
2649 4893 2.270352 TTTGCTGGTGGATTTCGTCT 57.730 45.000 0.00 0.00 0.00 4.18
2817 5061 1.331756 CTACGTACGTAATCCGGCACT 59.668 52.381 26.68 0.79 42.24 4.40
2873 5123 3.426568 GCCTGGCAACTCACTCGC 61.427 66.667 15.17 0.00 37.61 5.03
2958 5208 2.125753 CAGCACACCGAGGAGCTC 60.126 66.667 4.71 4.71 34.61 4.09
3302 5552 6.080682 AGCTGGTAATCAATGGATCTCTCTA 58.919 40.000 0.00 0.00 31.88 2.43
3331 5589 0.608130 GCCCTTCCATTCCAAACACC 59.392 55.000 0.00 0.00 0.00 4.16
3343 5601 1.804151 CCAAACACCGTCGATGTGAAT 59.196 47.619 20.69 9.21 37.18 2.57
3345 5603 3.225548 CAAACACCGTCGATGTGAATTG 58.774 45.455 20.69 18.76 37.18 2.32
3346 5604 2.163818 ACACCGTCGATGTGAATTGT 57.836 45.000 20.69 6.25 37.18 2.71
3347 5605 1.798223 ACACCGTCGATGTGAATTGTG 59.202 47.619 20.69 14.16 37.18 3.33
3350 5608 2.478894 ACCGTCGATGTGAATTGTGAAC 59.521 45.455 3.52 0.00 0.00 3.18
3351 5609 2.736721 CCGTCGATGTGAATTGTGAACT 59.263 45.455 3.52 0.00 0.00 3.01
3352 5610 3.924073 CCGTCGATGTGAATTGTGAACTA 59.076 43.478 3.52 0.00 0.00 2.24
3379 5637 0.389391 ACTCAACCTGTCCTCACGTG 59.611 55.000 9.94 9.94 0.00 4.49
3380 5638 0.389391 CTCAACCTGTCCTCACGTGT 59.611 55.000 16.51 0.00 0.00 4.49
3381 5639 1.611977 CTCAACCTGTCCTCACGTGTA 59.388 52.381 16.51 1.31 0.00 2.90
3382 5640 2.231478 CTCAACCTGTCCTCACGTGTAT 59.769 50.000 16.51 0.00 0.00 2.29
3383 5641 3.423749 TCAACCTGTCCTCACGTGTATA 58.576 45.455 16.51 0.00 0.00 1.47
3481 5750 2.125106 GCCTCCCACATGGACGTC 60.125 66.667 7.13 7.13 38.61 4.34
3579 5855 9.799106 CCTAATGAAAGATAATTCTACCACCAT 57.201 33.333 0.00 0.00 0.00 3.55
3584 5860 8.094548 TGAAAGATAATTCTACCACCATATCGG 58.905 37.037 0.00 0.00 42.50 4.18
3600 5876 0.534203 TCGGTCAGGTTGCTTTCACC 60.534 55.000 0.00 0.00 0.00 4.02
3729 6005 2.431942 GACGTCGACATGGCGGTT 60.432 61.111 23.19 5.20 0.00 4.44
3806 6088 7.829725 TCCACAGAGGATAAAATGAACAAATG 58.170 34.615 0.00 0.00 43.07 2.32
4027 6314 2.362797 TGGGTCCCCAGGTACATAAA 57.637 50.000 5.13 0.00 41.89 1.40
4045 6332 9.638239 GTACATAAAGCCTTCATTTTTCATCAA 57.362 29.630 0.00 0.00 0.00 2.57
4068 6355 4.280677 ACCATGCTCAAATTCGAGGAAAAA 59.719 37.500 0.00 0.00 36.89 1.94
4163 7794 7.402054 TCTAGGTTGATAAGGAGCAATTTGAA 58.598 34.615 0.00 0.00 32.63 2.69
4214 7845 4.154347 GAGGGGGCGACTCTGCTG 62.154 72.222 0.00 0.00 34.52 4.41
4311 7943 4.422546 ACTTCTACTAGACGCACAAGAC 57.577 45.455 0.00 0.00 0.00 3.01
4330 7962 4.825422 AGACAGAAGGTGTACACATCATG 58.175 43.478 26.51 21.75 40.56 3.07
4355 8048 4.285863 ACTCACAAGGGGAAAACAATTGA 58.714 39.130 13.59 0.00 0.00 2.57
4433 8130 2.345641 CCTCATGAAGTTCAAGTACGCG 59.654 50.000 10.14 3.53 0.00 6.01
4436 8133 4.242475 TCATGAAGTTCAAGTACGCGAAT 58.758 39.130 15.93 0.00 0.00 3.34
4438 8136 4.640805 TGAAGTTCAAGTACGCGAATTC 57.359 40.909 15.93 3.77 0.00 2.17
4452 8150 3.363871 CGCGAATTCTTCACAATGTCACA 60.364 43.478 0.00 0.00 0.00 3.58
4456 8154 6.019762 CGAATTCTTCACAATGTCACATGAG 58.980 40.000 0.00 0.00 0.00 2.90
4457 8155 6.128472 CGAATTCTTCACAATGTCACATGAGA 60.128 38.462 0.00 0.00 0.00 3.27
4461 8159 6.962686 TCTTCACAATGTCACATGAGAAAAG 58.037 36.000 0.00 0.00 0.00 2.27
4473 8171 9.313118 GTCACATGAGAAAAGTTAAATTGGTTT 57.687 29.630 0.00 0.00 0.00 3.27
4506 8215 5.831525 TGAACTTCTAGTGTCTGACCAAGTA 59.168 40.000 5.17 0.00 0.00 2.24
4507 8216 6.322969 TGAACTTCTAGTGTCTGACCAAGTAA 59.677 38.462 5.17 0.00 0.00 2.24
4510 8219 5.707242 TCTAGTGTCTGACCAAGTAACTG 57.293 43.478 5.17 0.00 0.00 3.16
4513 8222 4.694339 AGTGTCTGACCAAGTAACTGTTC 58.306 43.478 5.17 0.00 0.00 3.18
4514 8223 4.406003 AGTGTCTGACCAAGTAACTGTTCT 59.594 41.667 5.17 0.00 0.00 3.01
4515 8224 4.508124 GTGTCTGACCAAGTAACTGTTCTG 59.492 45.833 5.17 0.00 0.00 3.02
4518 8227 2.152016 GACCAAGTAACTGTTCTGCCC 58.848 52.381 0.00 0.00 0.00 5.36
4521 8230 1.798813 CAAGTAACTGTTCTGCCCGTC 59.201 52.381 0.00 0.00 0.00 4.79
4522 8231 1.339097 AGTAACTGTTCTGCCCGTCT 58.661 50.000 0.00 0.00 0.00 4.18
4524 8233 2.104281 AGTAACTGTTCTGCCCGTCTTT 59.896 45.455 0.00 0.00 0.00 2.52
4525 8234 1.308998 AACTGTTCTGCCCGTCTTTG 58.691 50.000 0.00 0.00 0.00 2.77
4527 8236 1.856265 CTGTTCTGCCCGTCTTTGCC 61.856 60.000 0.00 0.00 0.00 4.52
4528 8237 2.282180 TTCTGCCCGTCTTTGCCC 60.282 61.111 0.00 0.00 0.00 5.36
4569 8284 0.037326 TAGAGAAGGCCAACTGCACG 60.037 55.000 5.01 0.00 43.89 5.34
4641 8356 2.620112 GGTGTCGAGGTCGGTTCGA 61.620 63.158 0.00 3.36 44.05 3.71
4680 8395 4.092968 GTGAATTGTTACTTCGCCTTCGAT 59.907 41.667 0.00 0.00 45.04 3.59
4695 8410 4.176752 GATCCCGAGGCGCCCTTT 62.177 66.667 26.15 3.93 31.76 3.11
4905 8627 2.890945 GTCCTTTGTTTGTGCCTGGTAT 59.109 45.455 0.00 0.00 0.00 2.73
4943 8665 6.748132 CAAAAACTTGTTGGAGGTGTGATAT 58.252 36.000 0.00 0.00 0.00 1.63
4974 10131 2.031437 GCAAGTGATTCGCTTCTGATCC 59.969 50.000 9.49 0.00 31.36 3.36
4996 10153 4.539870 CTTCATCTTTGTGTCACGCATTT 58.460 39.130 0.00 0.00 0.00 2.32
5033 10190 6.401796 GGTGTAACGCCTTTGAAACTATGTAG 60.402 42.308 0.00 0.00 38.12 2.74
5034 10191 5.640357 TGTAACGCCTTTGAAACTATGTAGG 59.360 40.000 0.00 0.00 0.00 3.18
5036 10193 4.504858 ACGCCTTTGAAACTATGTAGGAG 58.495 43.478 0.00 0.00 0.00 3.69
5037 10194 4.020485 ACGCCTTTGAAACTATGTAGGAGT 60.020 41.667 0.00 0.00 32.12 3.85
5038 10195 4.567159 CGCCTTTGAAACTATGTAGGAGTC 59.433 45.833 0.00 0.00 0.00 3.36
5039 10196 5.624738 CGCCTTTGAAACTATGTAGGAGTCT 60.625 44.000 0.00 0.00 0.00 3.24
5047 10799 7.764443 TGAAACTATGTAGGAGTCTTATGTTGC 59.236 37.037 0.00 0.00 0.00 4.17
5059 10811 6.064846 GTCTTATGTTGCAAGACCCATATG 57.935 41.667 0.00 6.83 43.98 1.78
5070 10822 5.280164 GCAAGACCCATATGAGATCCACATA 60.280 44.000 3.65 11.03 35.23 2.29
5071 10823 6.577838 GCAAGACCCATATGAGATCCACATAT 60.578 42.308 3.65 13.73 40.25 1.78
5074 10826 6.503217 AGACCCATATGAGATCCACATATTGT 59.497 38.462 15.74 15.27 38.40 2.71
5089 10841 6.993175 ACATATTGTGACGATGAATAGACG 57.007 37.500 0.00 0.00 0.00 4.18
5090 10842 6.504398 ACATATTGTGACGATGAATAGACGT 58.496 36.000 0.00 0.00 42.84 4.34
5096 10848 3.978687 GACGATGAATAGACGTCCCATT 58.021 45.455 13.01 12.19 46.66 3.16
5099 10851 4.809426 ACGATGAATAGACGTCCCATTTTC 59.191 41.667 13.01 11.57 35.33 2.29
5100 10852 4.808895 CGATGAATAGACGTCCCATTTTCA 59.191 41.667 13.01 13.96 0.00 2.69
5101 10853 5.276868 CGATGAATAGACGTCCCATTTTCAC 60.277 44.000 13.01 8.33 0.00 3.18
5102 10854 5.160607 TGAATAGACGTCCCATTTTCACT 57.839 39.130 13.01 0.00 0.00 3.41
5103 10855 5.556915 TGAATAGACGTCCCATTTTCACTT 58.443 37.500 13.01 0.00 0.00 3.16
5104 10856 5.642063 TGAATAGACGTCCCATTTTCACTTC 59.358 40.000 13.01 0.64 0.00 3.01
5105 10857 2.779506 AGACGTCCCATTTTCACTTCC 58.220 47.619 13.01 0.00 0.00 3.46
5107 10859 1.423921 ACGTCCCATTTTCACTTCCCT 59.576 47.619 0.00 0.00 0.00 4.20
5108 10860 2.640826 ACGTCCCATTTTCACTTCCCTA 59.359 45.455 0.00 0.00 0.00 3.53
5109 10861 3.270877 CGTCCCATTTTCACTTCCCTAG 58.729 50.000 0.00 0.00 0.00 3.02
5111 10863 3.265995 GTCCCATTTTCACTTCCCTAGGA 59.734 47.826 11.48 0.00 0.00 2.94
5112 10864 3.523564 TCCCATTTTCACTTCCCTAGGAG 59.476 47.826 11.48 2.65 31.21 3.69
5113 10865 3.372025 CCCATTTTCACTTCCCTAGGAGG 60.372 52.174 11.48 2.06 34.79 4.30
5114 10866 3.523564 CCATTTTCACTTCCCTAGGAGGA 59.476 47.826 11.48 0.00 37.67 3.71
5115 10867 4.384647 CCATTTTCACTTCCCTAGGAGGAG 60.385 50.000 11.48 7.19 37.67 3.69
5119 10871 1.394532 ACTTCCCTAGGAGGAGGTGA 58.605 55.000 11.48 0.00 44.04 4.02
5120 10872 1.007359 ACTTCCCTAGGAGGAGGTGAC 59.993 57.143 11.48 0.00 44.04 3.67
5122 10874 0.631753 TCCCTAGGAGGAGGTGACAG 59.368 60.000 11.48 0.00 37.67 3.51
5123 10875 0.397816 CCCTAGGAGGAGGTGACAGG 60.398 65.000 11.48 0.00 37.67 4.00
5125 10877 0.631753 CTAGGAGGAGGTGACAGGGA 59.368 60.000 0.00 0.00 0.00 4.20
5126 10878 0.631753 TAGGAGGAGGTGACAGGGAG 59.368 60.000 0.00 0.00 0.00 4.30
5127 10879 1.687493 GGAGGAGGTGACAGGGAGG 60.687 68.421 0.00 0.00 0.00 4.30
5128 10880 2.284995 AGGAGGTGACAGGGAGGC 60.285 66.667 0.00 0.00 0.00 4.70
5130 10882 3.775654 GAGGTGACAGGGAGGCCG 61.776 72.222 0.00 0.00 0.00 6.13
5147 13654 2.586792 GGCGAGGAGATGTGCCTT 59.413 61.111 0.00 0.00 44.16 4.35
5198 13711 1.750778 CCAAATCCAATTCGGGACCTG 59.249 52.381 0.00 0.00 40.44 4.00
5203 13716 5.324832 AATCCAATTCGGGACCTGAATAT 57.675 39.130 25.71 14.69 40.44 1.28
5211 13724 4.087182 TCGGGACCTGAATATAGACATCC 58.913 47.826 0.00 0.00 0.00 3.51
5216 13729 5.122512 ACCTGAATATAGACATCCGAACG 57.877 43.478 0.00 0.00 0.00 3.95
5223 13736 0.459899 AGACATCCGAACGCAGCATA 59.540 50.000 0.00 0.00 0.00 3.14
5224 13737 0.855349 GACATCCGAACGCAGCATAG 59.145 55.000 0.00 0.00 0.00 2.23
5225 13738 0.459899 ACATCCGAACGCAGCATAGA 59.540 50.000 0.00 0.00 0.00 1.98
5226 13739 1.135046 CATCCGAACGCAGCATAGAG 58.865 55.000 0.00 0.00 0.00 2.43
5227 13740 0.032678 ATCCGAACGCAGCATAGAGG 59.967 55.000 0.00 0.00 0.00 3.69
5228 13741 1.035385 TCCGAACGCAGCATAGAGGA 61.035 55.000 0.00 0.00 0.00 3.71
5229 13742 0.032678 CCGAACGCAGCATAGAGGAT 59.967 55.000 0.00 0.00 0.00 3.24
5230 13743 1.269723 CCGAACGCAGCATAGAGGATA 59.730 52.381 0.00 0.00 0.00 2.59
5231 13744 2.288213 CCGAACGCAGCATAGAGGATAA 60.288 50.000 0.00 0.00 0.00 1.75
5232 13745 2.983136 CGAACGCAGCATAGAGGATAAG 59.017 50.000 0.00 0.00 0.00 1.73
5233 13746 3.304726 CGAACGCAGCATAGAGGATAAGA 60.305 47.826 0.00 0.00 0.00 2.10
5234 13747 4.621991 GAACGCAGCATAGAGGATAAGAA 58.378 43.478 0.00 0.00 0.00 2.52
5235 13748 3.983741 ACGCAGCATAGAGGATAAGAAC 58.016 45.455 0.00 0.00 0.00 3.01
5236 13749 3.384789 ACGCAGCATAGAGGATAAGAACA 59.615 43.478 0.00 0.00 0.00 3.18
5237 13750 4.039730 ACGCAGCATAGAGGATAAGAACAT 59.960 41.667 0.00 0.00 0.00 2.71
5238 13751 4.993584 CGCAGCATAGAGGATAAGAACATT 59.006 41.667 0.00 0.00 0.00 2.71
5239 13752 5.468072 CGCAGCATAGAGGATAAGAACATTT 59.532 40.000 0.00 0.00 0.00 2.32
5240 13753 6.347240 CGCAGCATAGAGGATAAGAACATTTC 60.347 42.308 0.00 0.00 0.00 2.17
5241 13754 6.484643 GCAGCATAGAGGATAAGAACATTTCA 59.515 38.462 0.00 0.00 0.00 2.69
5375 13888 6.461640 ACACGCTAGACCTATTTTAACACTT 58.538 36.000 0.00 0.00 0.00 3.16
5386 13902 8.832735 ACCTATTTTAACACTTCCCTCAATCTA 58.167 33.333 0.00 0.00 0.00 1.98
5397 13913 8.750298 CACTTCCCTCAATCTAAACTTCTACTA 58.250 37.037 0.00 0.00 0.00 1.82
5455 13971 0.249868 CTGTCGAGTGGCTGGTTTGA 60.250 55.000 0.00 0.00 0.00 2.69
5474 13990 3.076621 TGATGAACACATCAGCCAACTC 58.923 45.455 8.53 0.00 43.93 3.01
5528 14044 0.603569 CCAGAAGCTACACGACCACT 59.396 55.000 0.00 0.00 0.00 4.00
5530 14046 1.542030 CAGAAGCTACACGACCACTCT 59.458 52.381 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 4.999939 GGCGCGTTTGGTTGCCAG 63.000 66.667 8.43 0.00 46.76 4.85
122 123 1.299926 GCCGCGGATAGTTGTCGAT 60.300 57.895 33.48 0.00 0.00 3.59
127 128 0.597637 ATTCTCGCCGCGGATAGTTG 60.598 55.000 33.48 15.45 0.00 3.16
175 176 2.238144 TCCCAAGAAGAAGGATGAGCAG 59.762 50.000 0.00 0.00 0.00 4.24
503 573 2.364324 CCGCATGTACCCTAGCTTTCTA 59.636 50.000 0.00 0.00 0.00 2.10
504 574 1.139058 CCGCATGTACCCTAGCTTTCT 59.861 52.381 0.00 0.00 0.00 2.52
505 575 1.583054 CCGCATGTACCCTAGCTTTC 58.417 55.000 0.00 0.00 0.00 2.62
539 609 1.312815 GTGGAATCAGTAGCCCATGC 58.687 55.000 0.00 0.00 37.95 4.06
596 666 7.391833 TGGCCGAAAAATATTTATTGCCTTTTT 59.608 29.630 21.59 5.37 37.40 1.94
597 667 6.881602 TGGCCGAAAAATATTTATTGCCTTTT 59.118 30.769 21.59 5.31 37.40 2.27
598 668 6.410540 TGGCCGAAAAATATTTATTGCCTTT 58.589 32.000 21.59 5.88 37.40 3.11
599 669 5.983540 TGGCCGAAAAATATTTATTGCCTT 58.016 33.333 21.59 6.44 37.40 4.35
600 670 5.606348 TGGCCGAAAAATATTTATTGCCT 57.394 34.783 21.59 0.00 37.40 4.75
601 671 6.859420 AATGGCCGAAAAATATTTATTGCC 57.141 33.333 17.47 17.47 37.20 4.52
602 672 7.170658 TGCTAATGGCCGAAAAATATTTATTGC 59.829 33.333 0.01 2.70 40.92 3.56
603 673 8.487176 GTGCTAATGGCCGAAAAATATTTATTG 58.513 33.333 0.01 0.00 40.92 1.90
604 674 7.655732 GGTGCTAATGGCCGAAAAATATTTATT 59.344 33.333 0.01 0.00 40.92 1.40
605 675 7.015195 AGGTGCTAATGGCCGAAAAATATTTAT 59.985 33.333 0.01 0.00 40.92 1.40
606 676 6.322712 AGGTGCTAATGGCCGAAAAATATTTA 59.677 34.615 0.01 0.00 40.92 1.40
607 677 5.128663 AGGTGCTAATGGCCGAAAAATATTT 59.871 36.000 0.00 0.00 40.92 1.40
608 678 4.649218 AGGTGCTAATGGCCGAAAAATATT 59.351 37.500 0.00 0.00 40.92 1.28
609 679 4.037923 CAGGTGCTAATGGCCGAAAAATAT 59.962 41.667 0.00 0.00 40.92 1.28
610 680 3.380004 CAGGTGCTAATGGCCGAAAAATA 59.620 43.478 0.00 0.00 40.92 1.40
611 681 2.166254 CAGGTGCTAATGGCCGAAAAAT 59.834 45.455 0.00 0.00 40.92 1.82
612 682 1.543802 CAGGTGCTAATGGCCGAAAAA 59.456 47.619 0.00 0.00 40.92 1.94
613 683 1.173043 CAGGTGCTAATGGCCGAAAA 58.827 50.000 0.00 0.00 40.92 2.29
614 684 0.037590 ACAGGTGCTAATGGCCGAAA 59.962 50.000 0.00 0.00 40.92 3.46
615 685 0.906066 TACAGGTGCTAATGGCCGAA 59.094 50.000 0.00 0.00 40.92 4.30
677 779 4.038633 AGGGGAAGACTTTCTGGTATACC 58.961 47.826 15.50 15.50 33.68 2.73
809 912 2.531206 GCTACAGCTTGGAGAAGTACG 58.469 52.381 0.11 0.00 38.21 3.67
811 914 2.497675 CTGGCTACAGCTTGGAGAAGTA 59.502 50.000 0.54 0.00 41.70 2.24
853 958 1.566018 GGTGTGTGGCTACAGCGTTC 61.566 60.000 1.83 0.00 43.26 3.95
867 972 4.285851 GAAGAGGGCTTCGGTGTG 57.714 61.111 0.00 0.00 40.96 3.82
874 979 8.554490 TGAGTTTCTTATATAGAAGAGGGCTT 57.446 34.615 9.61 0.00 43.52 4.35
918 1027 2.649531 TCTGCTCCTCTCTAGCTACC 57.350 55.000 0.00 0.00 40.73 3.18
920 1029 4.511786 TCTTTCTGCTCCTCTCTAGCTA 57.488 45.455 0.00 0.00 40.73 3.32
921 1030 3.380471 TCTTTCTGCTCCTCTCTAGCT 57.620 47.619 0.00 0.00 40.73 3.32
923 1032 5.451798 GGTCAATCTTTCTGCTCCTCTCTAG 60.452 48.000 0.00 0.00 0.00 2.43
961 1070 2.684881 CTCAGCAACACAACCTTGAGTT 59.315 45.455 0.00 0.00 41.53 3.01
985 1099 1.061411 CCATTGCGATGCGTGTCTG 59.939 57.895 8.58 0.00 31.67 3.51
1021 1156 1.153086 GCTTGATCTCCGGCACCAT 60.153 57.895 0.00 0.00 0.00 3.55
1114 1252 7.741027 AGCCAGTATATGAATCATTTCACTG 57.259 36.000 17.38 17.38 44.36 3.66
1167 1312 1.205055 AAGGGAAGGTAGCTAGTGCC 58.795 55.000 0.00 0.00 40.80 5.01
1178 1351 1.429463 CGAAGACGACAAAGGGAAGG 58.571 55.000 0.00 0.00 42.66 3.46
1199 1372 1.858091 ATCGACATGCATCTTCGTCC 58.142 50.000 21.06 2.25 34.35 4.79
1271 2920 2.165030 CACCTCATTTGGATCACCTTGC 59.835 50.000 0.00 0.00 37.04 4.01
1469 3137 0.872388 CTACCTTTTGCGCGGAGTTT 59.128 50.000 8.83 0.00 0.00 2.66
1519 3221 9.543231 TCAGAAAAGAAACTATAGTCTTCCCTA 57.457 33.333 5.70 0.00 32.90 3.53
1520 3222 8.315482 GTCAGAAAAGAAACTATAGTCTTCCCT 58.685 37.037 5.70 4.68 32.90 4.20
1548 3256 7.384660 TGCATGAACTGTATTTCCACAAATTTC 59.615 33.333 0.00 0.00 33.95 2.17
1603 3311 8.254508 TGTCTAAAAAGTGGCTACAAAACATTT 58.745 29.630 2.02 0.00 0.00 2.32
1655 3364 1.123077 CTCCCACTATGCACAGCCTA 58.877 55.000 0.00 0.00 0.00 3.93
1657 3366 0.830648 TACTCCCACTATGCACAGCC 59.169 55.000 0.00 0.00 0.00 4.85
1658 3367 2.691409 TTACTCCCACTATGCACAGC 57.309 50.000 0.00 0.00 0.00 4.40
1659 3368 6.874134 GGTTATATTACTCCCACTATGCACAG 59.126 42.308 0.00 0.00 0.00 3.66
1660 3369 6.517697 CGGTTATATTACTCCCACTATGCACA 60.518 42.308 0.00 0.00 0.00 4.57
1661 3370 5.867716 CGGTTATATTACTCCCACTATGCAC 59.132 44.000 0.00 0.00 0.00 4.57
1662 3371 5.046878 CCGGTTATATTACTCCCACTATGCA 60.047 44.000 0.00 0.00 0.00 3.96
1663 3372 5.046807 ACCGGTTATATTACTCCCACTATGC 60.047 44.000 0.00 0.00 0.00 3.14
1664 3373 6.600882 ACCGGTTATATTACTCCCACTATG 57.399 41.667 0.00 0.00 0.00 2.23
1665 3374 7.729881 TGTTACCGGTTATATTACTCCCACTAT 59.270 37.037 15.04 0.00 0.00 2.12
1666 3375 7.066142 TGTTACCGGTTATATTACTCCCACTA 58.934 38.462 15.04 0.00 0.00 2.74
1667 3376 5.898972 TGTTACCGGTTATATTACTCCCACT 59.101 40.000 15.04 0.00 0.00 4.00
1668 3377 6.160576 TGTTACCGGTTATATTACTCCCAC 57.839 41.667 15.04 0.00 0.00 4.61
1669 3378 6.742082 GCATGTTACCGGTTATATTACTCCCA 60.742 42.308 15.04 0.00 0.00 4.37
1670 3379 5.640783 GCATGTTACCGGTTATATTACTCCC 59.359 44.000 15.04 0.00 0.00 4.30
1671 3380 6.146673 GTGCATGTTACCGGTTATATTACTCC 59.853 42.308 15.04 0.00 0.00 3.85
1672 3381 6.927381 AGTGCATGTTACCGGTTATATTACTC 59.073 38.462 15.04 3.43 0.00 2.59
1673 3382 6.823497 AGTGCATGTTACCGGTTATATTACT 58.177 36.000 15.04 11.38 0.00 2.24
1674 3383 7.011669 ACAAGTGCATGTTACCGGTTATATTAC 59.988 37.037 15.04 9.22 0.00 1.89
1675 3384 7.011576 CACAAGTGCATGTTACCGGTTATATTA 59.988 37.037 15.04 0.00 0.00 0.98
1676 3385 5.883673 ACAAGTGCATGTTACCGGTTATATT 59.116 36.000 15.04 0.00 0.00 1.28
1677 3386 5.295787 CACAAGTGCATGTTACCGGTTATAT 59.704 40.000 15.04 4.23 0.00 0.86
1678 3387 4.632251 CACAAGTGCATGTTACCGGTTATA 59.368 41.667 15.04 1.00 0.00 0.98
1679 3388 3.438781 CACAAGTGCATGTTACCGGTTAT 59.561 43.478 15.04 2.09 0.00 1.89
1680 3389 2.809119 CACAAGTGCATGTTACCGGTTA 59.191 45.455 15.04 0.00 0.00 2.85
1681 3390 1.606668 CACAAGTGCATGTTACCGGTT 59.393 47.619 15.04 0.00 0.00 4.44
1682 3391 1.202710 TCACAAGTGCATGTTACCGGT 60.203 47.619 13.98 13.98 0.00 5.28
1683 3392 1.196808 GTCACAAGTGCATGTTACCGG 59.803 52.381 0.00 0.00 0.00 5.28
1684 3393 2.143122 AGTCACAAGTGCATGTTACCG 58.857 47.619 0.00 0.00 29.62 4.02
1685 3394 4.513692 TGTTAGTCACAAGTGCATGTTACC 59.486 41.667 0.00 0.00 29.62 2.85
1686 3395 5.666969 TGTTAGTCACAAGTGCATGTTAC 57.333 39.130 0.00 0.00 29.87 2.50
1687 3396 6.094186 TGTTTGTTAGTCACAAGTGCATGTTA 59.906 34.615 0.00 0.00 46.37 2.41
1688 3397 5.105957 TGTTTGTTAGTCACAAGTGCATGTT 60.106 36.000 0.00 0.00 46.37 2.71
1689 3398 4.397730 TGTTTGTTAGTCACAAGTGCATGT 59.602 37.500 0.00 0.00 46.37 3.21
1690 3399 4.919206 TGTTTGTTAGTCACAAGTGCATG 58.081 39.130 0.00 0.00 46.37 4.06
1691 3400 5.522456 CATGTTTGTTAGTCACAAGTGCAT 58.478 37.500 0.00 0.00 46.37 3.96
1692 3401 4.733230 GCATGTTTGTTAGTCACAAGTGCA 60.733 41.667 14.30 6.55 46.37 4.57
1693 3402 3.730715 GCATGTTTGTTAGTCACAAGTGC 59.269 43.478 0.00 7.87 46.37 4.40
1694 3403 5.173774 AGCATGTTTGTTAGTCACAAGTG 57.826 39.130 0.00 0.00 46.37 3.16
1695 3404 5.835113 AAGCATGTTTGTTAGTCACAAGT 57.165 34.783 0.00 0.00 46.37 3.16
1696 3405 7.324375 CACATAAGCATGTTTGTTAGTCACAAG 59.676 37.037 4.89 0.00 42.98 3.16
1697 3406 7.138081 CACATAAGCATGTTTGTTAGTCACAA 58.862 34.615 4.89 0.00 42.98 3.33
1698 3407 6.293900 CCACATAAGCATGTTTGTTAGTCACA 60.294 38.462 4.89 0.00 42.98 3.58
1699 3408 6.086222 CCACATAAGCATGTTTGTTAGTCAC 58.914 40.000 4.89 0.00 42.98 3.67
1700 3409 5.335583 GCCACATAAGCATGTTTGTTAGTCA 60.336 40.000 4.89 0.00 42.98 3.41
1701 3410 5.095490 GCCACATAAGCATGTTTGTTAGTC 58.905 41.667 4.89 0.00 42.98 2.59
1702 3411 4.522405 TGCCACATAAGCATGTTTGTTAGT 59.478 37.500 4.89 0.00 42.98 2.24
1703 3412 4.858692 GTGCCACATAAGCATGTTTGTTAG 59.141 41.667 4.89 0.00 42.98 2.34
1704 3413 4.279420 TGTGCCACATAAGCATGTTTGTTA 59.721 37.500 4.89 0.00 42.98 2.41
1705 3414 3.069300 TGTGCCACATAAGCATGTTTGTT 59.931 39.130 4.89 0.00 42.98 2.83
1706 3415 2.627221 TGTGCCACATAAGCATGTTTGT 59.373 40.909 4.89 0.00 42.98 2.83
1707 3416 2.988493 GTGTGCCACATAAGCATGTTTG 59.012 45.455 0.00 0.00 42.98 2.93
1708 3417 2.627221 TGTGTGCCACATAAGCATGTTT 59.373 40.909 0.00 0.00 42.98 2.83
1709 3418 2.237643 TGTGTGCCACATAAGCATGTT 58.762 42.857 0.00 0.00 42.98 2.71
1710 3419 1.908344 TGTGTGCCACATAAGCATGT 58.092 45.000 0.00 0.00 46.58 3.21
1711 3420 3.513680 ATTGTGTGCCACATAAGCATG 57.486 42.857 12.58 0.00 44.16 4.06
1712 3421 5.657826 TTAATTGTGTGCCACATAAGCAT 57.342 34.783 12.58 4.64 44.16 3.79
1713 3422 5.459536 TTTAATTGTGTGCCACATAAGCA 57.540 34.783 12.58 0.00 44.16 3.91
1714 3423 6.098679 TCATTTAATTGTGTGCCACATAAGC 58.901 36.000 12.58 0.00 44.16 3.09
1715 3424 7.537715 TCTCATTTAATTGTGTGCCACATAAG 58.462 34.615 12.58 0.00 44.16 1.73
1716 3425 7.392953 TCTCTCATTTAATTGTGTGCCACATAA 59.607 33.333 9.52 9.52 44.16 1.90
1717 3426 6.883756 TCTCTCATTTAATTGTGTGCCACATA 59.116 34.615 0.00 0.00 44.16 2.29
1718 3427 5.711506 TCTCTCATTTAATTGTGTGCCACAT 59.288 36.000 0.00 0.00 44.16 3.21
1719 3428 5.069318 TCTCTCATTTAATTGTGTGCCACA 58.931 37.500 0.00 0.00 43.02 4.17
1720 3429 5.412594 TCTCTCTCATTTAATTGTGTGCCAC 59.587 40.000 0.00 0.00 34.56 5.01
1721 3430 5.559770 TCTCTCTCATTTAATTGTGTGCCA 58.440 37.500 0.00 0.00 0.00 4.92
1722 3431 5.877012 TCTCTCTCTCATTTAATTGTGTGCC 59.123 40.000 0.00 0.00 0.00 5.01
1723 3432 6.036953 CCTCTCTCTCTCATTTAATTGTGTGC 59.963 42.308 0.00 0.00 0.00 4.57
1724 3433 6.538021 CCCTCTCTCTCTCATTTAATTGTGTG 59.462 42.308 0.00 0.00 0.00 3.82
1725 3434 6.214412 ACCCTCTCTCTCTCATTTAATTGTGT 59.786 38.462 0.00 0.00 0.00 3.72
1726 3435 6.648192 ACCCTCTCTCTCTCATTTAATTGTG 58.352 40.000 0.00 0.00 0.00 3.33
1727 3436 6.882768 ACCCTCTCTCTCTCATTTAATTGT 57.117 37.500 0.00 0.00 0.00 2.71
1728 3437 8.700051 TCTAACCCTCTCTCTCTCATTTAATTG 58.300 37.037 0.00 0.00 0.00 2.32
1729 3438 8.700973 GTCTAACCCTCTCTCTCTCATTTAATT 58.299 37.037 0.00 0.00 0.00 1.40
1730 3439 7.289084 GGTCTAACCCTCTCTCTCTCATTTAAT 59.711 40.741 0.00 0.00 30.04 1.40
1731 3440 6.608002 GGTCTAACCCTCTCTCTCTCATTTAA 59.392 42.308 0.00 0.00 30.04 1.52
1732 3441 6.130569 GGTCTAACCCTCTCTCTCTCATTTA 58.869 44.000 0.00 0.00 30.04 1.40
1733 3442 4.959839 GGTCTAACCCTCTCTCTCTCATTT 59.040 45.833 0.00 0.00 30.04 2.32
1734 3443 4.542697 GGTCTAACCCTCTCTCTCTCATT 58.457 47.826 0.00 0.00 30.04 2.57
1735 3444 3.434453 CGGTCTAACCCTCTCTCTCTCAT 60.434 52.174 0.00 0.00 33.75 2.90
1736 3445 2.092861 CGGTCTAACCCTCTCTCTCTCA 60.093 54.545 0.00 0.00 33.75 3.27
1737 3446 2.092807 ACGGTCTAACCCTCTCTCTCTC 60.093 54.545 0.00 0.00 33.75 3.20
1738 3447 1.917568 ACGGTCTAACCCTCTCTCTCT 59.082 52.381 0.00 0.00 33.75 3.10
1739 3448 2.423446 ACGGTCTAACCCTCTCTCTC 57.577 55.000 0.00 0.00 33.75 3.20
1740 3449 2.903375 AACGGTCTAACCCTCTCTCT 57.097 50.000 0.00 0.00 33.75 3.10
1741 3450 3.878699 CTCTAACGGTCTAACCCTCTCTC 59.121 52.174 0.00 0.00 33.75 3.20
1742 3451 3.266513 ACTCTAACGGTCTAACCCTCTCT 59.733 47.826 0.00 0.00 33.75 3.10
1743 3452 3.619419 ACTCTAACGGTCTAACCCTCTC 58.381 50.000 0.00 0.00 33.75 3.20
1744 3453 3.735720 ACTCTAACGGTCTAACCCTCT 57.264 47.619 0.00 0.00 33.75 3.69
1745 3454 4.702131 TGTTACTCTAACGGTCTAACCCTC 59.298 45.833 0.00 0.00 41.50 4.30
1746 3455 4.666512 TGTTACTCTAACGGTCTAACCCT 58.333 43.478 0.00 0.00 41.50 4.34
1747 3456 5.588958 ATGTTACTCTAACGGTCTAACCC 57.411 43.478 0.00 0.00 41.50 4.11
1748 3457 6.319911 ACCTATGTTACTCTAACGGTCTAACC 59.680 42.308 0.00 0.00 41.50 2.85
1749 3458 7.326968 ACCTATGTTACTCTAACGGTCTAAC 57.673 40.000 0.00 0.00 41.50 2.34
1750 3459 8.486210 TCTACCTATGTTACTCTAACGGTCTAA 58.514 37.037 0.00 0.00 41.50 2.10
1751 3460 8.023021 TCTACCTATGTTACTCTAACGGTCTA 57.977 38.462 0.00 0.00 41.50 2.59
1752 3461 6.893583 TCTACCTATGTTACTCTAACGGTCT 58.106 40.000 0.00 0.00 41.50 3.85
1753 3462 7.742556 ATCTACCTATGTTACTCTAACGGTC 57.257 40.000 0.00 0.00 41.50 4.79
1754 3463 7.663493 GGTATCTACCTATGTTACTCTAACGGT 59.337 40.741 0.00 0.00 43.10 4.83
1755 3464 7.663081 TGGTATCTACCTATGTTACTCTAACGG 59.337 40.741 7.84 0.00 46.58 4.44
1756 3465 8.613060 TGGTATCTACCTATGTTACTCTAACG 57.387 38.462 7.84 0.00 46.58 3.18
1784 3493 9.838975 CACAAAGTAGCATAACATTTAACATGA 57.161 29.630 0.00 0.00 0.00 3.07
1785 3494 9.624697 ACACAAAGTAGCATAACATTTAACATG 57.375 29.630 0.00 0.00 0.00 3.21
1786 3495 9.840427 GACACAAAGTAGCATAACATTTAACAT 57.160 29.630 0.00 0.00 0.00 2.71
1787 3496 8.841300 TGACACAAAGTAGCATAACATTTAACA 58.159 29.630 0.00 0.00 0.00 2.41
1788 3497 9.840427 ATGACACAAAGTAGCATAACATTTAAC 57.160 29.630 0.00 0.00 0.00 2.01
1789 3498 9.838975 CATGACACAAAGTAGCATAACATTTAA 57.161 29.630 0.00 0.00 0.00 1.52
1790 3499 7.967854 GCATGACACAAAGTAGCATAACATTTA 59.032 33.333 0.00 0.00 0.00 1.40
1791 3500 6.808212 GCATGACACAAAGTAGCATAACATTT 59.192 34.615 0.00 0.00 0.00 2.32
1792 3501 6.072008 TGCATGACACAAAGTAGCATAACATT 60.072 34.615 0.00 0.00 30.65 2.71
1793 3502 5.415389 TGCATGACACAAAGTAGCATAACAT 59.585 36.000 0.00 0.00 30.65 2.71
1794 3503 4.759183 TGCATGACACAAAGTAGCATAACA 59.241 37.500 0.00 0.00 30.65 2.41
1795 3504 5.295431 TGCATGACACAAAGTAGCATAAC 57.705 39.130 0.00 0.00 30.65 1.89
1796 3505 5.647225 TCATGCATGACACAAAGTAGCATAA 59.353 36.000 25.42 0.00 39.67 1.90
1797 3506 5.184711 TCATGCATGACACAAAGTAGCATA 58.815 37.500 25.42 0.00 39.67 3.14
1798 3507 4.011698 TCATGCATGACACAAAGTAGCAT 58.988 39.130 25.42 0.00 41.24 3.79
1799 3508 3.410508 TCATGCATGACACAAAGTAGCA 58.589 40.909 25.42 0.00 37.13 3.49
1811 3520 7.820578 TGACCATATTTATTGTCATGCATGA 57.179 32.000 25.42 25.42 34.59 3.07
1812 3521 8.520351 AGATGACCATATTTATTGTCATGCATG 58.480 33.333 21.07 21.07 44.32 4.06
1813 3522 8.645814 AGATGACCATATTTATTGTCATGCAT 57.354 30.769 17.32 0.00 44.32 3.96
1814 3523 9.743581 ATAGATGACCATATTTATTGTCATGCA 57.256 29.630 17.32 8.62 44.32 3.96
1815 3524 9.999009 CATAGATGACCATATTTATTGTCATGC 57.001 33.333 17.32 11.16 44.32 4.06
1861 3570 9.363401 AGTGTATGATACTACCTTTATAGTGCA 57.637 33.333 4.03 0.00 36.09 4.57
1869 3578 9.129532 GTGGTACTAGTGTATGATACTACCTTT 57.870 37.037 5.39 0.00 30.24 3.11
1870 3579 8.277197 TGTGGTACTAGTGTATGATACTACCTT 58.723 37.037 5.39 0.00 30.24 3.50
1871 3580 7.809238 TGTGGTACTAGTGTATGATACTACCT 58.191 38.462 5.39 7.15 30.24 3.08
1872 3581 8.512956 CATGTGGTACTAGTGTATGATACTACC 58.487 40.741 5.39 7.44 0.00 3.18
1873 3582 8.021973 GCATGTGGTACTAGTGTATGATACTAC 58.978 40.741 5.39 2.50 0.00 2.73
1874 3583 7.722285 TGCATGTGGTACTAGTGTATGATACTA 59.278 37.037 5.39 0.00 0.00 1.82
1875 3584 6.549736 TGCATGTGGTACTAGTGTATGATACT 59.450 38.462 5.39 0.00 0.00 2.12
1876 3585 6.745116 TGCATGTGGTACTAGTGTATGATAC 58.255 40.000 5.39 0.00 0.00 2.24
1877 3586 6.969993 TGCATGTGGTACTAGTGTATGATA 57.030 37.500 5.39 0.00 0.00 2.15
1878 3587 5.869649 TGCATGTGGTACTAGTGTATGAT 57.130 39.130 5.39 0.00 0.00 2.45
1879 3588 5.362430 TCATGCATGTGGTACTAGTGTATGA 59.638 40.000 25.43 15.82 38.81 2.15
1880 3589 5.600696 TCATGCATGTGGTACTAGTGTATG 58.399 41.667 25.43 12.88 35.23 2.39
1881 3590 5.869649 TCATGCATGTGGTACTAGTGTAT 57.130 39.130 25.43 0.00 0.00 2.29
1882 3591 5.600696 CATCATGCATGTGGTACTAGTGTA 58.399 41.667 25.43 2.45 0.00 2.90
1883 3592 4.445453 CATCATGCATGTGGTACTAGTGT 58.555 43.478 25.43 0.00 0.00 3.55
1884 3593 3.249320 GCATCATGCATGTGGTACTAGTG 59.751 47.826 25.43 12.09 44.26 2.74
1885 3594 3.470709 GCATCATGCATGTGGTACTAGT 58.529 45.455 25.43 0.00 44.26 2.57
1895 3604 9.194271 GAGTATCATATAGTAGCATCATGCATG 57.806 37.037 21.07 21.07 40.04 4.06
1896 3605 8.366401 GGAGTATCATATAGTAGCATCATGCAT 58.634 37.037 13.38 0.00 41.63 3.96
1897 3606 7.201947 GGGAGTATCATATAGTAGCATCATGCA 60.202 40.741 13.38 0.00 41.63 3.96
1898 3607 7.151308 GGGAGTATCATATAGTAGCATCATGC 58.849 42.308 0.00 0.00 39.92 4.06
1899 3608 7.288621 TGGGGAGTATCATATAGTAGCATCATG 59.711 40.741 0.00 0.00 36.25 3.07
1900 3609 7.288852 GTGGGGAGTATCATATAGTAGCATCAT 59.711 40.741 0.00 0.00 36.25 2.45
1901 3610 6.607600 GTGGGGAGTATCATATAGTAGCATCA 59.392 42.308 0.00 0.00 36.25 3.07
1902 3611 6.836527 AGTGGGGAGTATCATATAGTAGCATC 59.163 42.308 0.00 0.00 36.25 3.91
1903 3612 6.746894 AGTGGGGAGTATCATATAGTAGCAT 58.253 40.000 0.00 0.00 36.25 3.79
1904 3613 6.153942 AGTGGGGAGTATCATATAGTAGCA 57.846 41.667 0.00 0.00 36.25 3.49
1905 3614 7.999545 TCATAGTGGGGAGTATCATATAGTAGC 59.000 40.741 0.00 0.00 36.25 3.58
1906 3615 9.567776 CTCATAGTGGGGAGTATCATATAGTAG 57.432 40.741 0.00 0.00 36.25 2.57
1907 3616 9.070210 ACTCATAGTGGGGAGTATCATATAGTA 57.930 37.037 0.00 0.00 42.30 1.82
1908 3617 7.945278 ACTCATAGTGGGGAGTATCATATAGT 58.055 38.462 0.00 0.00 42.30 2.12
1909 3618 9.567776 CTACTCATAGTGGGGAGTATCATATAG 57.432 40.741 0.00 0.00 43.51 1.31
1910 3619 7.999545 GCTACTCATAGTGGGGAGTATCATATA 59.000 40.741 0.00 0.00 43.51 0.86
1911 3620 6.836527 GCTACTCATAGTGGGGAGTATCATAT 59.163 42.308 0.00 0.00 43.51 1.78
1912 3621 6.188407 GCTACTCATAGTGGGGAGTATCATA 58.812 44.000 0.00 0.00 43.51 2.15
1913 3622 5.020132 GCTACTCATAGTGGGGAGTATCAT 58.980 45.833 0.00 0.00 43.51 2.45
1914 3623 4.408276 GCTACTCATAGTGGGGAGTATCA 58.592 47.826 0.00 0.00 43.51 2.15
1915 3624 3.764972 GGCTACTCATAGTGGGGAGTATC 59.235 52.174 0.00 0.00 43.51 2.24
1916 3625 3.403051 AGGCTACTCATAGTGGGGAGTAT 59.597 47.826 0.00 0.00 43.51 2.12
1917 3626 2.789992 AGGCTACTCATAGTGGGGAGTA 59.210 50.000 0.00 0.00 42.30 2.59
1918 3627 1.576272 AGGCTACTCATAGTGGGGAGT 59.424 52.381 0.00 0.00 45.72 3.85
1919 3628 2.390225 AGGCTACTCATAGTGGGGAG 57.610 55.000 0.00 0.00 37.18 4.30
1920 3629 2.868964 AAGGCTACTCATAGTGGGGA 57.131 50.000 0.00 0.00 0.00 4.81
1921 3630 5.395768 GCATATAAGGCTACTCATAGTGGGG 60.396 48.000 0.00 0.00 0.00 4.96
1922 3631 5.187772 TGCATATAAGGCTACTCATAGTGGG 59.812 44.000 0.00 0.00 0.00 4.61
1923 3632 6.286240 TGCATATAAGGCTACTCATAGTGG 57.714 41.667 0.00 0.00 0.00 4.00
1924 3633 6.760298 CCATGCATATAAGGCTACTCATAGTG 59.240 42.308 0.00 0.00 0.00 2.74
1925 3634 6.441924 ACCATGCATATAAGGCTACTCATAGT 59.558 38.462 0.00 0.00 0.00 2.12
1926 3635 6.760298 CACCATGCATATAAGGCTACTCATAG 59.240 42.308 0.00 0.00 0.00 2.23
1927 3636 6.213397 ACACCATGCATATAAGGCTACTCATA 59.787 38.462 0.00 0.00 0.00 2.15
1928 3637 5.013495 ACACCATGCATATAAGGCTACTCAT 59.987 40.000 0.00 0.00 0.00 2.90
1929 3638 4.347876 ACACCATGCATATAAGGCTACTCA 59.652 41.667 0.00 0.00 0.00 3.41
1930 3639 4.899502 ACACCATGCATATAAGGCTACTC 58.100 43.478 0.00 0.00 0.00 2.59
1931 3640 4.982241 ACACCATGCATATAAGGCTACT 57.018 40.909 0.00 0.00 0.00 2.57
1932 3641 6.391227 AAAACACCATGCATATAAGGCTAC 57.609 37.500 0.00 0.00 0.00 3.58
1933 3642 5.238432 CGAAAACACCATGCATATAAGGCTA 59.762 40.000 0.00 0.00 0.00 3.93
1934 3643 4.036734 CGAAAACACCATGCATATAAGGCT 59.963 41.667 0.00 0.00 0.00 4.58
1935 3644 4.036262 TCGAAAACACCATGCATATAAGGC 59.964 41.667 0.00 0.00 0.00 4.35
1936 3645 5.505654 GGTCGAAAACACCATGCATATAAGG 60.506 44.000 0.00 0.00 33.63 2.69
1937 3646 5.065859 TGGTCGAAAACACCATGCATATAAG 59.934 40.000 0.00 0.00 39.11 1.73
1938 3647 4.944317 TGGTCGAAAACACCATGCATATAA 59.056 37.500 0.00 0.00 39.11 0.98
1939 3648 4.518249 TGGTCGAAAACACCATGCATATA 58.482 39.130 0.00 0.00 39.11 0.86
2012 3721 9.341078 AGCCACAATCAAATTTAATTTCAGTTT 57.659 25.926 0.00 0.00 0.00 2.66
2168 3886 8.758633 TTTATTGTCTTTTGTTTTTCAACGGA 57.241 26.923 0.00 0.00 35.40 4.69
2226 4098 2.614013 GGGAGGCAGGGGAAGGAA 60.614 66.667 0.00 0.00 0.00 3.36
2299 4173 3.494045 TCAGTGACAGCGAGTAGAATG 57.506 47.619 0.00 0.00 0.00 2.67
2366 4240 2.422832 GGAGAGAGCAAGCAAAATCAGG 59.577 50.000 0.00 0.00 0.00 3.86
2367 4241 3.079578 TGGAGAGAGCAAGCAAAATCAG 58.920 45.455 0.00 0.00 0.00 2.90
2416 4339 3.795561 AAGCAAAGAATCTCGTGAACG 57.204 42.857 0.00 0.00 41.45 3.95
2454 4377 3.064207 TGTACATCTGCTTCCGTTGAAC 58.936 45.455 0.00 0.00 0.00 3.18
2458 4381 2.831685 TGTGTACATCTGCTTCCGTT 57.168 45.000 0.00 0.00 0.00 4.44
2507 4430 3.559069 AGGGATAGAATACCGTGTCGAA 58.441 45.455 0.00 0.00 38.74 3.71
2508 4431 3.219176 AGGGATAGAATACCGTGTCGA 57.781 47.619 0.00 0.00 38.74 4.20
2509 4432 4.049186 CAAAGGGATAGAATACCGTGTCG 58.951 47.826 0.00 0.00 38.74 4.35
2510 4433 5.272283 TCAAAGGGATAGAATACCGTGTC 57.728 43.478 0.00 0.00 38.74 3.67
2511 4434 5.888982 ATCAAAGGGATAGAATACCGTGT 57.111 39.130 0.00 0.00 38.74 4.49
2551 4474 5.179182 CGGTAGCATGCATATACAAACATCA 59.821 40.000 21.98 0.00 0.00 3.07
2601 4798 1.200020 GCATTTCTCCCTCGTTTGTGG 59.800 52.381 0.00 0.00 0.00 4.17
2602 4799 1.200020 GGCATTTCTCCCTCGTTTGTG 59.800 52.381 0.00 0.00 0.00 3.33
2605 4802 0.323629 TCGGCATTTCTCCCTCGTTT 59.676 50.000 0.00 0.00 0.00 3.60
2606 4803 0.391263 GTCGGCATTTCTCCCTCGTT 60.391 55.000 0.00 0.00 0.00 3.85
2817 5061 3.665515 TACATCGACAGGGGCGGGA 62.666 63.158 0.00 0.00 0.00 5.14
2822 5066 1.000283 GATGAGCTACATCGACAGGGG 60.000 57.143 9.44 0.00 44.46 4.79
2831 5076 0.669077 GTCGACCGGATGAGCTACAT 59.331 55.000 9.46 0.00 42.47 2.29
2845 5090 0.313672 TTGCCAGGCAATTTGTCGAC 59.686 50.000 23.88 9.11 43.99 4.20
2846 5091 2.725811 TTGCCAGGCAATTTGTCGA 58.274 47.368 23.88 0.00 43.99 4.20
3135 5385 4.386413 GGGATGATGATGCCGACC 57.614 61.111 0.00 0.00 29.14 4.79
3288 5538 6.019479 GCGTTAAGTTGTAGAGAGATCCATTG 60.019 42.308 0.00 0.00 0.00 2.82
3302 5552 2.579410 ATGGAAGGGCGTTAAGTTGT 57.421 45.000 0.00 0.00 0.00 3.32
3331 5589 5.702622 ATAGTTCACAATTCACATCGACG 57.297 39.130 0.00 0.00 0.00 5.12
3343 5601 9.268268 CAGGTTGAGTTTTACTATAGTTCACAA 57.732 33.333 11.40 7.91 0.00 3.33
3345 5603 8.828688 ACAGGTTGAGTTTTACTATAGTTCAC 57.171 34.615 11.40 5.76 0.00 3.18
3346 5604 8.092687 GGACAGGTTGAGTTTTACTATAGTTCA 58.907 37.037 11.40 5.41 0.00 3.18
3347 5605 8.312564 AGGACAGGTTGAGTTTTACTATAGTTC 58.687 37.037 11.40 2.59 0.00 3.01
3350 5608 7.760340 GTGAGGACAGGTTGAGTTTTACTATAG 59.240 40.741 0.00 0.00 0.00 1.31
3351 5609 7.576287 CGTGAGGACAGGTTGAGTTTTACTATA 60.576 40.741 0.00 0.00 0.00 1.31
3352 5610 6.465084 GTGAGGACAGGTTGAGTTTTACTAT 58.535 40.000 0.00 0.00 0.00 2.12
3379 5637 4.261322 CCAGCCTGAAACATGCATGTATAC 60.261 45.833 31.55 23.40 40.80 1.47
3380 5638 3.884693 CCAGCCTGAAACATGCATGTATA 59.115 43.478 31.55 18.99 40.80 1.47
3381 5639 2.691526 CCAGCCTGAAACATGCATGTAT 59.308 45.455 31.55 18.64 40.80 2.29
3382 5640 2.093890 CCAGCCTGAAACATGCATGTA 58.906 47.619 31.55 16.08 40.80 2.29
3383 5641 0.892755 CCAGCCTGAAACATGCATGT 59.107 50.000 26.61 26.61 44.20 3.21
3481 5750 0.451628 CATTTGTGCTCACGCTGTCG 60.452 55.000 0.00 0.00 42.43 4.35
3508 5777 6.480524 TGCATGACACAGAACAAGTAATAC 57.519 37.500 0.00 0.00 0.00 1.89
3525 5794 6.825213 AGTGTAAATAGAGCAGAAATGCATGA 59.175 34.615 0.00 0.00 37.25 3.07
3579 5855 2.614481 GGTGAAAGCAACCTGACCGATA 60.614 50.000 0.00 0.00 0.00 2.92
3584 5860 1.949257 CCGGTGAAAGCAACCTGAC 59.051 57.895 0.00 0.00 0.00 3.51
3600 5876 1.153549 GCCTACTTCACCAGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
3729 6005 1.002868 GGCAAGCCTTGAGAGCTCA 60.003 57.895 17.77 0.00 40.49 4.26
3806 6088 3.335579 CTCTGTGGGGTTGTTTACTAGC 58.664 50.000 0.00 0.00 0.00 3.42
3818 6100 1.202806 TCTGTCTTTTGCTCTGTGGGG 60.203 52.381 0.00 0.00 0.00 4.96
3994 6279 3.430862 CCCATGTTGGTGGCGACG 61.431 66.667 0.00 0.00 37.96 5.12
4025 6312 5.927819 TGGTTGATGAAAAATGAAGGCTTT 58.072 33.333 0.00 0.00 0.00 3.51
4027 6314 5.484715 CATGGTTGATGAAAAATGAAGGCT 58.515 37.500 0.00 0.00 33.31 4.58
4045 6332 2.787473 TCCTCGAATTTGAGCATGGT 57.213 45.000 16.26 0.00 34.56 3.55
4068 6355 2.025418 CCGACTAGTTTTGGCGCGT 61.025 57.895 8.43 0.00 0.00 6.01
4163 7794 3.200165 GCTCAATGTACCTTAGGACCCTT 59.800 47.826 4.77 0.00 0.00 3.95
4297 7928 2.029828 ACCTTCTGTCTTGTGCGTCTAG 60.030 50.000 0.00 0.00 0.00 2.43
4298 7929 1.961394 ACCTTCTGTCTTGTGCGTCTA 59.039 47.619 0.00 0.00 0.00 2.59
4302 7934 1.792949 GTACACCTTCTGTCTTGTGCG 59.207 52.381 0.00 0.00 33.91 5.34
4311 7943 6.166279 AGTAACATGATGTGTACACCTTCTG 58.834 40.000 22.91 16.42 41.14 3.02
4330 7962 5.784578 ATTGTTTTCCCCTTGTGAGTAAC 57.215 39.130 0.00 0.00 0.00 2.50
4355 8048 4.624913 TCTTCATGTCCTCCTATGGAAGT 58.375 43.478 0.00 0.00 37.93 3.01
4436 8133 6.940831 TTTCTCATGTGACATTGTGAAGAA 57.059 33.333 0.00 0.00 29.98 2.52
4438 8136 6.732154 ACTTTTCTCATGTGACATTGTGAAG 58.268 36.000 0.00 0.14 29.98 3.02
4473 8171 9.996554 TCAGACACTAGAAGTTCATAATTCAAA 57.003 29.630 5.50 0.00 0.00 2.69
4506 8215 1.308998 CAAAGACGGGCAGAACAGTT 58.691 50.000 0.00 0.00 0.00 3.16
4507 8216 1.166531 GCAAAGACGGGCAGAACAGT 61.167 55.000 0.00 0.00 0.00 3.55
4510 8219 2.626780 GGGCAAAGACGGGCAGAAC 61.627 63.158 0.00 0.00 0.00 3.01
4518 8227 3.423154 GTCCTGCGGGCAAAGACG 61.423 66.667 6.73 0.00 0.00 4.18
4528 8237 2.278206 CTCATCGACCGTCCTGCG 60.278 66.667 0.00 0.00 40.95 5.18
4647 8362 2.642154 AACAATTCACCCACACGGTA 57.358 45.000 0.00 0.00 46.14 4.02
4695 8410 1.220749 GCTCATCTTGTACCCGCCA 59.779 57.895 0.00 0.00 0.00 5.69
4925 8647 9.605275 CCATATATATATCACACCTCCAACAAG 57.395 37.037 2.03 0.00 0.00 3.16
4932 8654 8.260818 ACTTGCACCATATATATATCACACCTC 58.739 37.037 2.03 0.00 0.00 3.85
4933 8655 8.043113 CACTTGCACCATATATATATCACACCT 58.957 37.037 2.03 0.00 0.00 4.00
4934 8656 8.040727 TCACTTGCACCATATATATATCACACC 58.959 37.037 2.03 0.00 0.00 4.16
4938 8660 9.533253 CGAATCACTTGCACCATATATATATCA 57.467 33.333 2.03 0.00 0.00 2.15
4939 8661 8.491152 GCGAATCACTTGCACCATATATATATC 58.509 37.037 2.03 0.00 0.00 1.63
4943 8665 5.793817 AGCGAATCACTTGCACCATATATA 58.206 37.500 0.00 0.00 0.00 0.86
4974 10131 3.818961 ATGCGTGACACAAAGATGAAG 57.181 42.857 6.37 0.00 0.00 3.02
5016 10173 5.735766 AGACTCCTACATAGTTTCAAAGGC 58.264 41.667 0.00 0.00 0.00 4.35
5037 10194 6.000246 TCATATGGGTCTTGCAACATAAGA 58.000 37.500 10.46 9.17 30.51 2.10
5038 10195 6.057533 TCTCATATGGGTCTTGCAACATAAG 58.942 40.000 10.46 7.37 30.51 1.73
5039 10196 6.000246 TCTCATATGGGTCTTGCAACATAA 58.000 37.500 10.46 0.00 30.51 1.90
5047 10799 4.694760 TGTGGATCTCATATGGGTCTTG 57.305 45.455 1.67 0.00 0.00 3.02
5076 10828 4.402056 AAATGGGACGTCTATTCATCGT 57.598 40.909 16.46 4.38 40.49 3.73
5078 10830 5.817816 AGTGAAAATGGGACGTCTATTCATC 59.182 40.000 16.46 16.16 0.00 2.92
5079 10831 5.745227 AGTGAAAATGGGACGTCTATTCAT 58.255 37.500 16.46 11.19 0.00 2.57
5080 10832 5.160607 AGTGAAAATGGGACGTCTATTCA 57.839 39.130 16.46 14.71 0.00 2.57
5083 10835 4.514401 GGAAGTGAAAATGGGACGTCTAT 58.486 43.478 16.46 7.74 0.00 1.98
5084 10836 3.307199 GGGAAGTGAAAATGGGACGTCTA 60.307 47.826 16.46 5.48 0.00 2.59
5085 10837 2.552373 GGGAAGTGAAAATGGGACGTCT 60.552 50.000 16.46 0.00 0.00 4.18
5086 10838 1.810755 GGGAAGTGAAAATGGGACGTC 59.189 52.381 7.13 7.13 0.00 4.34
5087 10839 1.423921 AGGGAAGTGAAAATGGGACGT 59.576 47.619 0.00 0.00 0.00 4.34
5088 10840 2.200373 AGGGAAGTGAAAATGGGACG 57.800 50.000 0.00 0.00 0.00 4.79
5089 10841 3.265995 TCCTAGGGAAGTGAAAATGGGAC 59.734 47.826 9.46 0.00 0.00 4.46
5090 10842 3.523564 CTCCTAGGGAAGTGAAAATGGGA 59.476 47.826 9.46 0.00 0.00 4.37
5091 10843 3.372025 CCTCCTAGGGAAGTGAAAATGGG 60.372 52.174 9.46 0.00 0.00 4.00
5092 10844 3.523564 TCCTCCTAGGGAAGTGAAAATGG 59.476 47.826 9.46 0.00 35.59 3.16
5096 10848 2.113777 ACCTCCTCCTAGGGAAGTGAAA 59.886 50.000 9.46 0.00 41.32 2.69
5099 10851 1.007238 TCACCTCCTCCTAGGGAAGTG 59.993 57.143 9.46 9.43 44.72 3.16
5100 10852 1.007359 GTCACCTCCTCCTAGGGAAGT 59.993 57.143 9.46 0.00 41.32 3.01
5101 10853 1.007238 TGTCACCTCCTCCTAGGGAAG 59.993 57.143 9.46 0.00 41.32 3.46
5102 10854 1.007238 CTGTCACCTCCTCCTAGGGAA 59.993 57.143 9.46 0.00 41.32 3.97
5103 10855 0.631753 CTGTCACCTCCTCCTAGGGA 59.368 60.000 9.46 0.00 41.32 4.20
5104 10856 0.397816 CCTGTCACCTCCTCCTAGGG 60.398 65.000 9.46 0.00 41.32 3.53
5105 10857 0.397816 CCCTGTCACCTCCTCCTAGG 60.398 65.000 0.82 0.82 42.82 3.02
5107 10859 0.631753 CTCCCTGTCACCTCCTCCTA 59.368 60.000 0.00 0.00 0.00 2.94
5108 10860 1.390125 CTCCCTGTCACCTCCTCCT 59.610 63.158 0.00 0.00 0.00 3.69
5109 10861 1.687493 CCTCCCTGTCACCTCCTCC 60.687 68.421 0.00 0.00 0.00 4.30
5111 10863 2.284995 GCCTCCCTGTCACCTCCT 60.285 66.667 0.00 0.00 0.00 3.69
5112 10864 3.403558 GGCCTCCCTGTCACCTCC 61.404 72.222 0.00 0.00 0.00 4.30
5113 10865 3.775654 CGGCCTCCCTGTCACCTC 61.776 72.222 0.00 0.00 0.00 3.85
5126 10878 4.899239 CACATCTCCTCGCCGGCC 62.899 72.222 23.46 2.84 0.00 6.13
5128 10880 4.899239 GGCACATCTCCTCGCCGG 62.899 72.222 0.00 0.00 34.26 6.13
5130 10882 1.817099 CAAGGCACATCTCCTCGCC 60.817 63.158 0.00 0.00 45.23 5.54
5198 13711 3.365220 GCTGCGTTCGGATGTCTATATTC 59.635 47.826 0.00 0.00 0.00 1.75
5203 13716 0.459899 ATGCTGCGTTCGGATGTCTA 59.540 50.000 0.00 0.00 0.00 2.59
5211 13724 2.706555 TATCCTCTATGCTGCGTTCG 57.293 50.000 0.00 0.00 0.00 3.95
5216 13729 6.484643 TGAAATGTTCTTATCCTCTATGCTGC 59.515 38.462 0.00 0.00 0.00 5.25
5231 13744 9.401058 CCCTATTCTCAAACTATGAAATGTTCT 57.599 33.333 0.00 0.00 37.67 3.01
5232 13745 9.178758 ACCCTATTCTCAAACTATGAAATGTTC 57.821 33.333 0.00 0.00 37.67 3.18
5233 13746 9.533831 AACCCTATTCTCAAACTATGAAATGTT 57.466 29.630 0.00 0.00 37.67 2.71
5234 13747 9.533831 AAACCCTATTCTCAAACTATGAAATGT 57.466 29.630 0.00 0.00 37.67 2.71
5237 13750 9.681062 CCTAAACCCTATTCTCAAACTATGAAA 57.319 33.333 0.00 0.00 37.67 2.69
5238 13751 9.053472 TCCTAAACCCTATTCTCAAACTATGAA 57.947 33.333 0.00 0.00 37.67 2.57
5239 13752 8.618240 TCCTAAACCCTATTCTCAAACTATGA 57.382 34.615 0.00 0.00 36.38 2.15
5240 13753 9.853177 AATCCTAAACCCTATTCTCAAACTATG 57.147 33.333 0.00 0.00 0.00 2.23
5375 13888 8.840200 ACATAGTAGAAGTTTAGATTGAGGGA 57.160 34.615 0.00 0.00 0.00 4.20
5397 13913 9.802039 TTTAGTTCCAATCTAAACCTTGTACAT 57.198 29.630 0.00 0.00 34.01 2.29
5455 13971 3.144657 TGAGTTGGCTGATGTGTTCAT 57.855 42.857 0.00 0.00 36.95 2.57
5474 13990 6.261826 GGTCAGGTTCATTTCCTCTAATGATG 59.738 42.308 0.00 0.00 42.40 3.07
5523 14039 4.651778 TCGATTTCCATTTTGAGAGTGGT 58.348 39.130 0.00 0.00 34.61 4.16
5524 14040 5.587844 AGATCGATTTCCATTTTGAGAGTGG 59.412 40.000 0.00 0.00 0.00 4.00
5528 14044 7.337689 ACATTGAGATCGATTTCCATTTTGAGA 59.662 33.333 12.95 0.00 0.00 3.27
5530 14046 7.252708 CACATTGAGATCGATTTCCATTTTGA 58.747 34.615 12.95 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.