Multiple sequence alignment - TraesCS1D01G302100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G302100 chr1D 100.000 4670 0 0 1 4670 399951422 399946753 0.000000e+00 8624
1 TraesCS1D01G302100 chr1D 93.750 464 22 6 5 463 422509453 422508992 0.000000e+00 689
2 TraesCS1D01G302100 chr1B 90.376 2556 162 37 2144 4670 536666609 536664109 0.000000e+00 3280
3 TraesCS1D01G302100 chr1B 89.161 1513 83 24 674 2143 536668151 536666677 0.000000e+00 1810
4 TraesCS1D01G302100 chr1A 95.138 1193 53 3 2144 3336 496313768 496312581 0.000000e+00 1877
5 TraesCS1D01G302100 chr1A 93.979 1063 52 7 3610 4670 496312220 496311168 0.000000e+00 1598
6 TraesCS1D01G302100 chr1A 89.157 996 46 20 731 1707 496315345 496314393 0.000000e+00 1184
7 TraesCS1D01G302100 chr1A 91.832 453 25 6 1701 2143 496314286 496313836 5.130000e-174 621
8 TraesCS1D01G302100 chr1A 97.196 321 8 1 3337 3656 496312539 496312219 4.110000e-150 542
9 TraesCS1D01G302100 chr1A 82.292 288 40 6 643 921 496319404 496319119 6.040000e-59 239
10 TraesCS1D01G302100 chr4D 93.830 470 21 8 1 464 88034653 88034186 0.000000e+00 701
11 TraesCS1D01G302100 chr4D 93.978 465 23 5 2 463 490085281 490085743 0.000000e+00 699
12 TraesCS1D01G302100 chr2D 94.530 457 20 4 10 463 289097045 289096591 0.000000e+00 701
13 TraesCS1D01G302100 chr2D 94.530 457 17 8 14 463 248432133 248432588 0.000000e+00 699
14 TraesCS1D01G302100 chr2D 94.311 457 21 5 10 463 390700885 390701339 0.000000e+00 695
15 TraesCS1D01G302100 chr5D 93.790 467 22 7 1 463 385371082 385370619 0.000000e+00 695
16 TraesCS1D01G302100 chr7D 93.562 466 24 6 1 463 209532723 209532261 0.000000e+00 689
17 TraesCS1D01G302100 chr3D 93.576 467 23 6 1 463 131506161 131505698 0.000000e+00 689


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G302100 chr1D 399946753 399951422 4669 True 8624.000000 8624 100.0000 1 4670 1 chr1D.!!$R1 4669
1 TraesCS1D01G302100 chr1B 536664109 536668151 4042 True 2545.000000 3280 89.7685 674 4670 2 chr1B.!!$R1 3996
2 TraesCS1D01G302100 chr1A 496311168 496319404 8236 True 1010.166667 1877 91.5990 643 4670 6 chr1A.!!$R1 4027

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
519 520 0.035176 TTTACGTTTGAGGGGGTCGG 59.965 55.000 0.00 0.00 0.00 4.79 F
618 619 0.038343 ACGACCCACAATTTGCATGC 60.038 50.000 11.82 11.82 0.00 4.06 F
621 622 0.035176 ACCCACAATTTGCATGCCAC 59.965 50.000 16.68 0.00 0.00 5.01 F
943 4918 0.111639 TCCCCAAAGGACCCGAAAAG 59.888 55.000 0.00 0.00 40.93 2.27 F
1185 5175 0.253394 CCCCTTTCCTCTCCTCCCTT 60.253 60.000 0.00 0.00 0.00 3.95 F
2087 6219 0.960364 AATGTGCCTGCTAACACGGG 60.960 55.000 0.00 0.00 39.71 5.28 F
2823 7022 1.078848 AGGCTTCTCGATGCACCAC 60.079 57.895 0.00 0.00 33.64 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1598 5603 0.727398 CGGCTTAAAAAGAGCGAGGG 59.273 55.0 0.0 0.0 41.03 4.30 R
2061 6192 0.742990 TAGCAGGCACATTACGGCAC 60.743 55.0 0.0 0.0 0.00 5.01 R
2068 6199 0.960364 CCCGTGTTAGCAGGCACATT 60.960 55.0 0.0 0.0 35.51 2.71 R
2428 6627 1.405272 CCCGGTGTATCCCCTACCAC 61.405 65.0 0.0 0.0 34.10 4.16 R
2982 7181 0.476771 TCCCCGCAAGAAAAAGACCT 59.523 50.0 0.0 0.0 43.02 3.85 R
2997 7199 1.054978 AGCTCCTTAATCCGGTCCCC 61.055 60.0 0.0 0.0 0.00 4.81 R
4397 8703 1.018226 AGACTACGGACACGGACTCG 61.018 60.0 0.0 0.0 46.48 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 4.439901 GCCTCCCCCTCCCTCCTT 62.440 72.222 0.00 0.00 0.00 3.36
36 37 2.461637 CCTCCCCCTCCCTCCTTT 59.538 66.667 0.00 0.00 0.00 3.11
37 38 1.716689 CCTCCCCCTCCCTCCTTTA 59.283 63.158 0.00 0.00 0.00 1.85
38 39 0.272235 CCTCCCCCTCCCTCCTTTAT 59.728 60.000 0.00 0.00 0.00 1.40
39 40 1.512643 CCTCCCCCTCCCTCCTTTATA 59.487 57.143 0.00 0.00 0.00 0.98
40 41 2.116342 CCTCCCCCTCCCTCCTTTATAT 59.884 54.545 0.00 0.00 0.00 0.86
41 42 3.343138 CCTCCCCCTCCCTCCTTTATATA 59.657 52.174 0.00 0.00 0.00 0.86
42 43 4.363573 CTCCCCCTCCCTCCTTTATATAC 58.636 52.174 0.00 0.00 0.00 1.47
43 44 3.105283 CCCCCTCCCTCCTTTATATACG 58.895 54.545 0.00 0.00 0.00 3.06
44 45 3.105283 CCCCTCCCTCCTTTATATACGG 58.895 54.545 0.00 0.00 0.00 4.02
45 46 3.105283 CCCTCCCTCCTTTATATACGGG 58.895 54.545 0.00 0.00 0.00 5.28
46 47 3.105283 CCTCCCTCCTTTATATACGGGG 58.895 54.545 0.00 0.00 32.52 5.73
47 48 2.500504 CTCCCTCCTTTATATACGGGGC 59.499 54.545 0.00 0.00 32.98 5.80
48 49 2.158127 TCCCTCCTTTATATACGGGGCA 60.158 50.000 0.00 0.00 32.98 5.36
49 50 2.236395 CCCTCCTTTATATACGGGGCAG 59.764 54.545 0.00 0.00 0.00 4.85
50 51 2.236395 CCTCCTTTATATACGGGGCAGG 59.764 54.545 0.00 0.00 0.00 4.85
51 52 2.236395 CTCCTTTATATACGGGGCAGGG 59.764 54.545 0.00 0.00 0.00 4.45
52 53 1.280998 CCTTTATATACGGGGCAGGGG 59.719 57.143 0.00 0.00 0.00 4.79
53 54 1.280998 CTTTATATACGGGGCAGGGGG 59.719 57.143 0.00 0.00 0.00 5.40
54 55 1.202769 TTATATACGGGGCAGGGGGC 61.203 60.000 0.00 0.00 43.74 5.80
71 72 2.100605 GGCACCCTAGAACACAGAAG 57.899 55.000 0.00 0.00 0.00 2.85
72 73 1.348036 GGCACCCTAGAACACAGAAGT 59.652 52.381 0.00 0.00 0.00 3.01
73 74 2.224548 GGCACCCTAGAACACAGAAGTT 60.225 50.000 0.00 0.00 0.00 2.66
74 75 2.808543 GCACCCTAGAACACAGAAGTTG 59.191 50.000 0.00 0.00 0.00 3.16
75 76 3.494398 GCACCCTAGAACACAGAAGTTGA 60.494 47.826 0.00 0.00 0.00 3.18
76 77 4.804261 GCACCCTAGAACACAGAAGTTGAT 60.804 45.833 0.00 0.00 0.00 2.57
77 78 4.932200 CACCCTAGAACACAGAAGTTGATC 59.068 45.833 0.00 0.00 0.00 2.92
78 79 4.841246 ACCCTAGAACACAGAAGTTGATCT 59.159 41.667 0.00 0.00 0.00 2.75
79 80 5.308237 ACCCTAGAACACAGAAGTTGATCTT 59.692 40.000 0.00 0.00 39.32 2.40
80 81 6.183361 ACCCTAGAACACAGAAGTTGATCTTT 60.183 38.462 0.00 0.00 36.40 2.52
81 82 7.016268 ACCCTAGAACACAGAAGTTGATCTTTA 59.984 37.037 0.00 0.00 36.40 1.85
82 83 7.547370 CCCTAGAACACAGAAGTTGATCTTTAG 59.453 40.741 0.00 0.00 36.40 1.85
83 84 6.793492 AGAACACAGAAGTTGATCTTTAGC 57.207 37.500 0.00 0.00 36.40 3.09
84 85 5.703130 AGAACACAGAAGTTGATCTTTAGCC 59.297 40.000 0.00 0.00 36.40 3.93
85 86 3.997021 ACACAGAAGTTGATCTTTAGCCG 59.003 43.478 0.00 0.00 36.40 5.52
86 87 3.997021 CACAGAAGTTGATCTTTAGCCGT 59.003 43.478 0.00 0.00 36.40 5.68
87 88 3.997021 ACAGAAGTTGATCTTTAGCCGTG 59.003 43.478 0.00 0.00 36.40 4.94
88 89 3.997021 CAGAAGTTGATCTTTAGCCGTGT 59.003 43.478 0.00 0.00 36.40 4.49
89 90 3.997021 AGAAGTTGATCTTTAGCCGTGTG 59.003 43.478 0.00 0.00 36.40 3.82
90 91 2.076863 AGTTGATCTTTAGCCGTGTGC 58.923 47.619 0.00 0.00 41.71 4.57
91 92 4.952605 AAGTTGATCTTTAGCCGTGTGCG 61.953 47.826 0.00 0.00 37.92 5.34
107 108 4.722700 CGGTGCCCCCTTCCACAG 62.723 72.222 0.00 0.00 33.72 3.66
108 109 3.256960 GGTGCCCCCTTCCACAGA 61.257 66.667 0.00 0.00 33.72 3.41
109 110 2.840753 GGTGCCCCCTTCCACAGAA 61.841 63.158 0.00 0.00 33.72 3.02
110 111 1.152830 GTGCCCCCTTCCACAGAAA 59.847 57.895 0.00 0.00 32.37 2.52
111 112 1.152830 TGCCCCCTTCCACAGAAAC 59.847 57.895 0.00 0.00 0.00 2.78
112 113 1.152830 GCCCCCTTCCACAGAAACA 59.847 57.895 0.00 0.00 0.00 2.83
113 114 1.179174 GCCCCCTTCCACAGAAACAC 61.179 60.000 0.00 0.00 0.00 3.32
114 115 0.184933 CCCCCTTCCACAGAAACACA 59.815 55.000 0.00 0.00 0.00 3.72
115 116 1.318576 CCCCTTCCACAGAAACACAC 58.681 55.000 0.00 0.00 0.00 3.82
116 117 1.133792 CCCCTTCCACAGAAACACACT 60.134 52.381 0.00 0.00 0.00 3.55
117 118 2.654863 CCCTTCCACAGAAACACACTT 58.345 47.619 0.00 0.00 0.00 3.16
118 119 3.023832 CCCTTCCACAGAAACACACTTT 58.976 45.455 0.00 0.00 0.00 2.66
119 120 4.204012 CCCTTCCACAGAAACACACTTTA 58.796 43.478 0.00 0.00 0.00 1.85
120 121 4.275936 CCCTTCCACAGAAACACACTTTAG 59.724 45.833 0.00 0.00 0.00 1.85
121 122 4.881850 CCTTCCACAGAAACACACTTTAGT 59.118 41.667 0.00 0.00 0.00 2.24
122 123 5.007724 CCTTCCACAGAAACACACTTTAGTC 59.992 44.000 0.00 0.00 0.00 2.59
123 124 5.092554 TCCACAGAAACACACTTTAGTCA 57.907 39.130 0.00 0.00 0.00 3.41
124 125 5.680619 TCCACAGAAACACACTTTAGTCAT 58.319 37.500 0.00 0.00 0.00 3.06
125 126 6.822442 TCCACAGAAACACACTTTAGTCATA 58.178 36.000 0.00 0.00 0.00 2.15
126 127 7.450074 TCCACAGAAACACACTTTAGTCATAT 58.550 34.615 0.00 0.00 0.00 1.78
127 128 7.602644 TCCACAGAAACACACTTTAGTCATATC 59.397 37.037 0.00 0.00 0.00 1.63
128 129 7.411912 CCACAGAAACACACTTTAGTCATATCG 60.412 40.741 0.00 0.00 0.00 2.92
129 130 7.116376 CACAGAAACACACTTTAGTCATATCGT 59.884 37.037 0.00 0.00 0.00 3.73
130 131 7.328737 ACAGAAACACACTTTAGTCATATCGTC 59.671 37.037 0.00 0.00 0.00 4.20
131 132 6.527023 AGAAACACACTTTAGTCATATCGTCG 59.473 38.462 0.00 0.00 0.00 5.12
132 133 5.306532 ACACACTTTAGTCATATCGTCGT 57.693 39.130 0.00 0.00 0.00 4.34
133 134 6.426980 ACACACTTTAGTCATATCGTCGTA 57.573 37.500 0.00 0.00 0.00 3.43
134 135 6.484540 ACACACTTTAGTCATATCGTCGTAG 58.515 40.000 0.00 0.00 0.00 3.51
135 136 6.093219 ACACACTTTAGTCATATCGTCGTAGT 59.907 38.462 0.00 0.00 0.00 2.73
136 137 6.411203 CACACTTTAGTCATATCGTCGTAGTG 59.589 42.308 0.00 0.00 36.32 2.74
137 138 5.395778 CACTTTAGTCATATCGTCGTAGTGC 59.604 44.000 0.00 0.00 0.00 4.40
138 139 5.296283 ACTTTAGTCATATCGTCGTAGTGCT 59.704 40.000 0.00 0.00 0.00 4.40
139 140 5.746307 TTAGTCATATCGTCGTAGTGCTT 57.254 39.130 0.00 0.00 0.00 3.91
140 141 6.849588 TTAGTCATATCGTCGTAGTGCTTA 57.150 37.500 0.00 0.00 0.00 3.09
141 142 5.746307 AGTCATATCGTCGTAGTGCTTAA 57.254 39.130 0.00 0.00 0.00 1.85
142 143 5.749620 AGTCATATCGTCGTAGTGCTTAAG 58.250 41.667 0.00 0.00 0.00 1.85
143 144 4.910456 GTCATATCGTCGTAGTGCTTAAGG 59.090 45.833 4.29 0.00 0.00 2.69
144 145 2.205307 ATCGTCGTAGTGCTTAAGGC 57.795 50.000 4.29 0.00 42.22 4.35
145 146 0.179181 TCGTCGTAGTGCTTAAGGCG 60.179 55.000 4.29 3.32 45.43 5.52
146 147 0.179181 CGTCGTAGTGCTTAAGGCGA 60.179 55.000 4.29 0.00 40.57 5.54
147 148 1.730121 CGTCGTAGTGCTTAAGGCGAA 60.730 52.381 4.29 0.00 40.57 4.70
148 149 1.918609 GTCGTAGTGCTTAAGGCGAAG 59.081 52.381 4.29 0.00 45.43 3.79
162 163 4.770874 GAAGCCCTGCGCCGGTAA 62.771 66.667 17.16 0.00 38.78 2.85
166 167 2.818274 CCCTGCGCCGGTAACTTC 60.818 66.667 17.16 0.00 0.00 3.01
167 168 2.047655 CCTGCGCCGGTAACTTCA 60.048 61.111 10.08 0.00 0.00 3.02
168 169 1.449601 CCTGCGCCGGTAACTTCAT 60.450 57.895 10.08 0.00 0.00 2.57
169 170 1.429148 CCTGCGCCGGTAACTTCATC 61.429 60.000 10.08 0.00 0.00 2.92
170 171 0.739462 CTGCGCCGGTAACTTCATCA 60.739 55.000 4.18 0.00 0.00 3.07
171 172 0.107897 TGCGCCGGTAACTTCATCAT 60.108 50.000 4.18 0.00 0.00 2.45
172 173 0.582005 GCGCCGGTAACTTCATCATC 59.418 55.000 1.90 0.00 0.00 2.92
173 174 1.934589 CGCCGGTAACTTCATCATCA 58.065 50.000 1.90 0.00 0.00 3.07
174 175 1.593006 CGCCGGTAACTTCATCATCAC 59.407 52.381 1.90 0.00 0.00 3.06
175 176 1.940613 GCCGGTAACTTCATCATCACC 59.059 52.381 1.90 0.00 0.00 4.02
176 177 2.201732 CCGGTAACTTCATCATCACCG 58.798 52.381 4.05 4.05 46.43 4.94
177 178 2.418197 CCGGTAACTTCATCATCACCGT 60.418 50.000 9.78 0.00 45.65 4.83
178 179 2.858344 CGGTAACTTCATCATCACCGTC 59.142 50.000 2.91 0.00 42.93 4.79
179 180 3.674955 CGGTAACTTCATCATCACCGTCA 60.675 47.826 2.91 0.00 42.93 4.35
180 181 3.617263 GGTAACTTCATCATCACCGTCAC 59.383 47.826 0.00 0.00 0.00 3.67
181 182 2.386661 ACTTCATCATCACCGTCACC 57.613 50.000 0.00 0.00 0.00 4.02
182 183 1.623311 ACTTCATCATCACCGTCACCA 59.377 47.619 0.00 0.00 0.00 4.17
183 184 2.002586 CTTCATCATCACCGTCACCAC 58.997 52.381 0.00 0.00 0.00 4.16
184 185 0.108851 TCATCATCACCGTCACCACG 60.109 55.000 0.00 0.00 46.29 4.94
185 186 1.447838 ATCATCACCGTCACCACGC 60.448 57.895 0.00 0.00 45.29 5.34
186 187 2.852495 ATCATCACCGTCACCACGCC 62.852 60.000 0.00 0.00 45.29 5.68
187 188 3.621805 ATCACCGTCACCACGCCA 61.622 61.111 0.00 0.00 45.29 5.69
188 189 2.954684 ATCACCGTCACCACGCCAT 61.955 57.895 0.00 0.00 45.29 4.40
189 190 2.852495 ATCACCGTCACCACGCCATC 62.852 60.000 0.00 0.00 45.29 3.51
190 191 4.735132 ACCGTCACCACGCCATCG 62.735 66.667 0.00 0.00 45.29 3.84
209 210 2.156343 GTGCTGACGAAACTCTTCCT 57.844 50.000 0.00 0.00 0.00 3.36
210 211 2.062519 GTGCTGACGAAACTCTTCCTC 58.937 52.381 0.00 0.00 0.00 3.71
211 212 1.335964 TGCTGACGAAACTCTTCCTCG 60.336 52.381 0.00 0.00 38.53 4.63
212 213 1.983972 CTGACGAAACTCTTCCTCGG 58.016 55.000 0.00 0.00 36.90 4.63
213 214 0.038526 TGACGAAACTCTTCCTCGGC 60.039 55.000 0.00 0.00 41.08 5.54
214 215 0.736672 GACGAAACTCTTCCTCGGCC 60.737 60.000 0.00 0.00 34.45 6.13
215 216 1.186267 ACGAAACTCTTCCTCGGCCT 61.186 55.000 0.00 0.00 36.90 5.19
216 217 0.458716 CGAAACTCTTCCTCGGCCTC 60.459 60.000 0.00 0.00 0.00 4.70
217 218 0.608640 GAAACTCTTCCTCGGCCTCA 59.391 55.000 0.00 0.00 0.00 3.86
218 219 1.002087 GAAACTCTTCCTCGGCCTCAA 59.998 52.381 0.00 0.00 0.00 3.02
219 220 0.321996 AACTCTTCCTCGGCCTCAAC 59.678 55.000 0.00 0.00 0.00 3.18
220 221 0.543174 ACTCTTCCTCGGCCTCAACT 60.543 55.000 0.00 0.00 0.00 3.16
221 222 0.108424 CTCTTCCTCGGCCTCAACTG 60.108 60.000 0.00 0.00 0.00 3.16
222 223 1.078848 CTTCCTCGGCCTCAACTGG 60.079 63.158 0.00 0.00 0.00 4.00
223 224 1.535444 TTCCTCGGCCTCAACTGGA 60.535 57.895 0.00 0.00 0.00 3.86
224 225 0.909610 TTCCTCGGCCTCAACTGGAT 60.910 55.000 0.00 0.00 0.00 3.41
225 226 1.144936 CCTCGGCCTCAACTGGATC 59.855 63.158 0.00 0.00 0.00 3.36
226 227 1.617018 CCTCGGCCTCAACTGGATCA 61.617 60.000 0.00 0.00 0.00 2.92
227 228 0.250234 CTCGGCCTCAACTGGATCAA 59.750 55.000 0.00 0.00 0.00 2.57
228 229 0.250234 TCGGCCTCAACTGGATCAAG 59.750 55.000 0.00 0.00 0.00 3.02
229 230 0.250234 CGGCCTCAACTGGATCAAGA 59.750 55.000 3.42 0.00 0.00 3.02
230 231 1.741732 CGGCCTCAACTGGATCAAGAG 60.742 57.143 3.42 0.00 0.00 2.85
231 232 1.280421 GGCCTCAACTGGATCAAGAGT 59.720 52.381 3.42 0.00 0.00 3.24
232 233 2.290577 GGCCTCAACTGGATCAAGAGTT 60.291 50.000 3.42 1.11 32.48 3.01
233 234 3.006247 GCCTCAACTGGATCAAGAGTTC 58.994 50.000 3.42 0.00 29.73 3.01
234 235 3.257393 CCTCAACTGGATCAAGAGTTCG 58.743 50.000 3.42 0.67 29.73 3.95
235 236 3.056536 CCTCAACTGGATCAAGAGTTCGA 60.057 47.826 3.42 4.44 29.73 3.71
236 237 4.172505 CTCAACTGGATCAAGAGTTCGAG 58.827 47.826 3.42 9.35 29.73 4.04
237 238 3.056536 TCAACTGGATCAAGAGTTCGAGG 60.057 47.826 3.42 0.00 29.73 4.63
238 239 1.827969 ACTGGATCAAGAGTTCGAGGG 59.172 52.381 3.42 0.00 0.00 4.30
239 240 2.103373 CTGGATCAAGAGTTCGAGGGA 58.897 52.381 0.00 0.00 0.00 4.20
240 241 1.825474 TGGATCAAGAGTTCGAGGGAC 59.175 52.381 0.00 0.00 0.00 4.46
241 242 1.202313 GGATCAAGAGTTCGAGGGACG 60.202 57.143 0.00 0.00 44.09 4.79
242 243 1.473278 GATCAAGAGTTCGAGGGACGT 59.527 52.381 0.00 0.00 43.13 4.34
243 244 0.879765 TCAAGAGTTCGAGGGACGTC 59.120 55.000 7.13 7.13 43.13 4.34
244 245 0.596577 CAAGAGTTCGAGGGACGTCA 59.403 55.000 18.91 0.00 43.13 4.35
245 246 0.597072 AAGAGTTCGAGGGACGTCAC 59.403 55.000 18.91 15.14 43.13 3.67
246 247 1.212229 GAGTTCGAGGGACGTCACC 59.788 63.158 15.74 14.36 43.13 4.02
247 248 2.126580 GTTCGAGGGACGTCACCG 60.127 66.667 15.74 17.59 43.13 4.94
248 249 2.281692 TTCGAGGGACGTCACCGA 60.282 61.111 22.07 22.07 43.13 4.69
249 250 2.330372 TTCGAGGGACGTCACCGAG 61.330 63.158 23.73 17.34 43.13 4.63
250 251 4.477975 CGAGGGACGTCACCGAGC 62.478 72.222 15.74 8.48 37.88 5.03
251 252 3.063084 GAGGGACGTCACCGAGCT 61.063 66.667 15.74 0.00 37.88 4.09
252 253 3.343788 GAGGGACGTCACCGAGCTG 62.344 68.421 15.74 0.00 37.88 4.24
253 254 3.371063 GGGACGTCACCGAGCTGA 61.371 66.667 18.91 0.00 37.88 4.26
254 255 2.649034 GGACGTCACCGAGCTGAA 59.351 61.111 18.91 0.00 37.88 3.02
255 256 1.733399 GGACGTCACCGAGCTGAAC 60.733 63.158 18.91 0.00 37.88 3.18
256 257 2.050351 ACGTCACCGAGCTGAACG 60.050 61.111 0.00 0.00 37.88 3.95
257 258 2.050351 CGTCACCGAGCTGAACGT 60.050 61.111 0.00 0.00 35.63 3.99
258 259 2.365068 CGTCACCGAGCTGAACGTG 61.365 63.158 0.00 0.00 35.63 4.49
259 260 1.299926 GTCACCGAGCTGAACGTGT 60.300 57.895 0.00 0.00 0.00 4.49
260 261 1.299850 TCACCGAGCTGAACGTGTG 60.300 57.895 0.00 0.00 35.24 3.82
261 262 2.661866 ACCGAGCTGAACGTGTGC 60.662 61.111 0.00 0.00 0.00 4.57
262 263 2.661537 CCGAGCTGAACGTGTGCA 60.662 61.111 0.00 0.00 0.00 4.57
263 264 2.661566 CCGAGCTGAACGTGTGCAG 61.662 63.158 3.48 3.48 35.28 4.41
264 265 1.661509 CGAGCTGAACGTGTGCAGA 60.662 57.895 12.25 0.00 34.06 4.26
265 266 1.010935 CGAGCTGAACGTGTGCAGAT 61.011 55.000 12.25 5.18 34.06 2.90
266 267 0.718343 GAGCTGAACGTGTGCAGATC 59.282 55.000 12.25 11.22 39.88 2.75
267 268 1.010935 AGCTGAACGTGTGCAGATCG 61.011 55.000 12.25 0.00 34.06 3.69
268 269 1.417592 CTGAACGTGTGCAGATCGC 59.582 57.895 1.46 3.07 42.89 4.58
269 270 2.271024 CTGAACGTGTGCAGATCGCG 62.271 60.000 0.00 0.00 46.97 5.87
270 271 3.071459 GAACGTGTGCAGATCGCGG 62.071 63.158 6.13 0.00 46.97 6.46
271 272 3.567478 AACGTGTGCAGATCGCGGA 62.567 57.895 6.13 0.00 46.97 5.54
272 273 3.250323 CGTGTGCAGATCGCGGAG 61.250 66.667 6.13 0.00 46.97 4.63
273 274 2.887568 GTGTGCAGATCGCGGAGG 60.888 66.667 6.13 0.00 46.97 4.30
274 275 3.381983 TGTGCAGATCGCGGAGGT 61.382 61.111 6.13 0.00 46.97 3.85
275 276 2.887568 GTGCAGATCGCGGAGGTG 60.888 66.667 6.13 0.00 46.97 4.00
276 277 4.819761 TGCAGATCGCGGAGGTGC 62.820 66.667 6.13 11.38 46.97 5.01
293 294 3.152703 CCGTGCGTTCGGTACTTG 58.847 61.111 11.17 0.00 44.77 3.16
294 295 2.377310 CCGTGCGTTCGGTACTTGG 61.377 63.158 11.17 0.00 44.77 3.61
295 296 1.372004 CGTGCGTTCGGTACTTGGA 60.372 57.895 0.00 0.00 0.00 3.53
296 297 0.734942 CGTGCGTTCGGTACTTGGAT 60.735 55.000 0.00 0.00 0.00 3.41
297 298 0.997196 GTGCGTTCGGTACTTGGATC 59.003 55.000 0.00 0.00 0.00 3.36
298 299 0.457166 TGCGTTCGGTACTTGGATCG 60.457 55.000 0.00 1.14 0.00 3.69
299 300 1.143969 GCGTTCGGTACTTGGATCGG 61.144 60.000 0.00 0.00 0.00 4.18
300 301 0.171903 CGTTCGGTACTTGGATCGGT 59.828 55.000 0.00 0.00 0.00 4.69
301 302 1.403249 CGTTCGGTACTTGGATCGGTT 60.403 52.381 0.00 0.00 0.00 4.44
302 303 1.997606 GTTCGGTACTTGGATCGGTTG 59.002 52.381 0.00 0.00 0.00 3.77
303 304 0.533491 TCGGTACTTGGATCGGTTGG 59.467 55.000 0.00 0.00 0.00 3.77
304 305 0.533491 CGGTACTTGGATCGGTTGGA 59.467 55.000 0.00 0.00 0.00 3.53
305 306 1.138266 CGGTACTTGGATCGGTTGGAT 59.862 52.381 0.00 0.00 38.35 3.41
311 312 4.412933 GATCGGTTGGATCGCGAA 57.587 55.556 15.24 0.00 42.02 4.70
312 313 2.217112 GATCGGTTGGATCGCGAAG 58.783 57.895 15.24 0.00 42.02 3.79
313 314 0.248907 GATCGGTTGGATCGCGAAGA 60.249 55.000 15.24 4.68 42.02 2.87
314 315 0.527817 ATCGGTTGGATCGCGAAGAC 60.528 55.000 15.24 9.41 0.00 3.01
315 316 2.505498 CGGTTGGATCGCGAAGACG 61.505 63.158 15.24 8.74 42.93 4.18
316 317 1.445582 GGTTGGATCGCGAAGACGT 60.446 57.895 15.24 0.00 41.98 4.34
317 318 1.012486 GGTTGGATCGCGAAGACGTT 61.012 55.000 15.24 0.00 41.98 3.99
318 319 0.365859 GTTGGATCGCGAAGACGTTC 59.634 55.000 15.24 4.43 41.98 3.95
330 331 4.802664 GAAGACGTTCGACTACATCAAC 57.197 45.455 0.00 0.00 0.00 3.18
331 332 3.213249 AGACGTTCGACTACATCAACC 57.787 47.619 0.00 0.00 0.00 3.77
332 333 1.909532 GACGTTCGACTACATCAACCG 59.090 52.381 0.00 0.00 0.00 4.44
333 334 0.638746 CGTTCGACTACATCAACCGC 59.361 55.000 0.00 0.00 0.00 5.68
334 335 0.638746 GTTCGACTACATCAACCGCG 59.361 55.000 0.00 0.00 0.00 6.46
335 336 0.241749 TTCGACTACATCAACCGCGT 59.758 50.000 4.92 0.00 0.00 6.01
336 337 0.241749 TCGACTACATCAACCGCGTT 59.758 50.000 4.92 0.00 0.00 4.84
337 338 1.468127 TCGACTACATCAACCGCGTTA 59.532 47.619 4.92 0.00 0.00 3.18
338 339 2.095314 TCGACTACATCAACCGCGTTAA 60.095 45.455 4.92 0.00 0.00 2.01
339 340 2.855963 CGACTACATCAACCGCGTTAAT 59.144 45.455 4.92 0.00 0.00 1.40
340 341 4.037021 CGACTACATCAACCGCGTTAATA 58.963 43.478 4.92 0.00 0.00 0.98
341 342 4.500117 CGACTACATCAACCGCGTTAATAA 59.500 41.667 4.92 0.00 0.00 1.40
342 343 5.004630 CGACTACATCAACCGCGTTAATAAA 59.995 40.000 4.92 0.00 0.00 1.40
343 344 6.098367 ACTACATCAACCGCGTTAATAAAC 57.902 37.500 4.92 0.00 0.00 2.01
356 357 2.520686 AATAAACGCTTCCGCTTTCG 57.479 45.000 0.00 0.00 38.22 3.46
375 376 2.062971 GGTCTACGAGGGTATGTGGA 57.937 55.000 0.00 0.00 0.00 4.02
376 377 1.680207 GGTCTACGAGGGTATGTGGAC 59.320 57.143 0.00 0.87 43.42 4.02
377 378 2.372264 GTCTACGAGGGTATGTGGACA 58.628 52.381 4.32 0.00 43.55 4.02
378 379 2.098770 GTCTACGAGGGTATGTGGACAC 59.901 54.545 4.32 0.00 43.55 3.67
379 380 2.097036 CTACGAGGGTATGTGGACACA 58.903 52.381 7.68 7.68 46.44 3.72
380 381 0.606604 ACGAGGGTATGTGGACACAC 59.393 55.000 7.37 0.00 45.05 3.82
388 389 2.657237 GTGGACACACTCTCCCCG 59.343 66.667 0.00 0.00 44.29 5.73
389 390 3.311110 TGGACACACTCTCCCCGC 61.311 66.667 0.00 0.00 0.00 6.13
390 391 2.997897 GGACACACTCTCCCCGCT 60.998 66.667 0.00 0.00 0.00 5.52
391 392 2.574399 GACACACTCTCCCCGCTC 59.426 66.667 0.00 0.00 0.00 5.03
392 393 3.343788 GACACACTCTCCCCGCTCG 62.344 68.421 0.00 0.00 0.00 5.03
393 394 3.374402 CACACTCTCCCCGCTCGT 61.374 66.667 0.00 0.00 0.00 4.18
394 395 2.600769 ACACTCTCCCCGCTCGTT 60.601 61.111 0.00 0.00 0.00 3.85
395 396 2.125912 CACTCTCCCCGCTCGTTG 60.126 66.667 0.00 0.00 0.00 4.10
396 397 4.070552 ACTCTCCCCGCTCGTTGC 62.071 66.667 0.00 0.00 38.57 4.17
397 398 3.764466 CTCTCCCCGCTCGTTGCT 61.764 66.667 2.29 0.00 40.11 3.91
398 399 2.361992 TCTCCCCGCTCGTTGCTA 60.362 61.111 2.29 0.00 40.11 3.49
399 400 1.739338 CTCTCCCCGCTCGTTGCTAT 61.739 60.000 2.29 0.00 40.11 2.97
400 401 1.592669 CTCCCCGCTCGTTGCTATG 60.593 63.158 2.29 0.00 40.11 2.23
401 402 3.272334 CCCCGCTCGTTGCTATGC 61.272 66.667 2.29 0.00 40.11 3.14
402 403 2.202932 CCCGCTCGTTGCTATGCT 60.203 61.111 2.29 0.00 40.11 3.79
403 404 1.815421 CCCGCTCGTTGCTATGCTT 60.815 57.895 2.29 0.00 40.11 3.91
404 405 1.638467 CCGCTCGTTGCTATGCTTC 59.362 57.895 2.29 0.00 40.11 3.86
405 406 0.807667 CCGCTCGTTGCTATGCTTCT 60.808 55.000 2.29 0.00 40.11 2.85
406 407 0.574454 CGCTCGTTGCTATGCTTCTC 59.426 55.000 2.29 0.00 40.11 2.87
407 408 0.933796 GCTCGTTGCTATGCTTCTCC 59.066 55.000 0.00 0.00 38.95 3.71
408 409 1.472376 GCTCGTTGCTATGCTTCTCCT 60.472 52.381 0.00 0.00 38.95 3.69
409 410 2.223829 GCTCGTTGCTATGCTTCTCCTA 60.224 50.000 0.00 0.00 38.95 2.94
410 411 3.738281 GCTCGTTGCTATGCTTCTCCTAA 60.738 47.826 0.00 0.00 38.95 2.69
411 412 4.433615 CTCGTTGCTATGCTTCTCCTAAA 58.566 43.478 0.00 0.00 0.00 1.85
412 413 5.023533 TCGTTGCTATGCTTCTCCTAAAT 57.976 39.130 0.00 0.00 0.00 1.40
413 414 6.156748 TCGTTGCTATGCTTCTCCTAAATA 57.843 37.500 0.00 0.00 0.00 1.40
414 415 6.216569 TCGTTGCTATGCTTCTCCTAAATAG 58.783 40.000 0.00 0.00 0.00 1.73
415 416 6.040504 TCGTTGCTATGCTTCTCCTAAATAGA 59.959 38.462 0.00 0.00 0.00 1.98
416 417 6.870965 CGTTGCTATGCTTCTCCTAAATAGAT 59.129 38.462 0.00 0.00 0.00 1.98
417 418 7.062839 CGTTGCTATGCTTCTCCTAAATAGATC 59.937 40.741 0.00 0.00 0.00 2.75
418 419 7.789202 TGCTATGCTTCTCCTAAATAGATCT 57.211 36.000 0.00 0.00 0.00 2.75
419 420 8.200024 TGCTATGCTTCTCCTAAATAGATCTT 57.800 34.615 0.00 0.00 0.00 2.40
420 421 8.093307 TGCTATGCTTCTCCTAAATAGATCTTG 58.907 37.037 0.00 0.00 0.00 3.02
421 422 7.064490 GCTATGCTTCTCCTAAATAGATCTTGC 59.936 40.741 0.00 0.00 0.00 4.01
422 423 5.292765 TGCTTCTCCTAAATAGATCTTGCG 58.707 41.667 0.00 0.00 0.00 4.85
423 424 5.163405 TGCTTCTCCTAAATAGATCTTGCGT 60.163 40.000 0.00 0.00 0.00 5.24
424 425 5.176590 GCTTCTCCTAAATAGATCTTGCGTG 59.823 44.000 0.00 0.00 0.00 5.34
425 426 6.465439 TTCTCCTAAATAGATCTTGCGTGA 57.535 37.500 0.00 0.00 0.00 4.35
426 427 6.656632 TCTCCTAAATAGATCTTGCGTGAT 57.343 37.500 0.00 0.00 0.00 3.06
427 428 6.682746 TCTCCTAAATAGATCTTGCGTGATC 58.317 40.000 0.00 9.82 42.18 2.92
428 429 5.461526 TCCTAAATAGATCTTGCGTGATCG 58.538 41.667 0.00 0.00 45.35 3.69
429 430 5.009710 TCCTAAATAGATCTTGCGTGATCGT 59.990 40.000 0.00 4.36 45.35 3.73
430 431 6.206048 TCCTAAATAGATCTTGCGTGATCGTA 59.794 38.462 0.00 6.70 45.35 3.43
431 432 6.524933 CCTAAATAGATCTTGCGTGATCGTAG 59.475 42.308 0.00 11.07 45.35 3.51
432 433 2.783828 AGATCTTGCGTGATCGTAGG 57.216 50.000 11.44 0.00 45.35 3.18
433 434 2.298610 AGATCTTGCGTGATCGTAGGA 58.701 47.619 11.44 0.00 45.35 2.94
434 435 2.887783 AGATCTTGCGTGATCGTAGGAT 59.112 45.455 11.44 0.00 46.54 3.24
435 436 3.319405 AGATCTTGCGTGATCGTAGGATT 59.681 43.478 11.44 0.00 44.79 3.01
436 437 3.520290 TCTTGCGTGATCGTAGGATTT 57.480 42.857 0.00 0.00 39.49 2.17
437 438 3.857052 TCTTGCGTGATCGTAGGATTTT 58.143 40.909 0.00 0.00 39.49 1.82
438 439 4.250464 TCTTGCGTGATCGTAGGATTTTT 58.750 39.130 0.00 0.00 39.49 1.94
462 463 7.814264 TTTTAAAATACTACGTTCCCCAACA 57.186 32.000 0.00 0.00 32.14 3.33
463 464 7.814264 TTTAAAATACTACGTTCCCCAACAA 57.186 32.000 0.00 0.00 32.14 2.83
464 465 7.999450 TTAAAATACTACGTTCCCCAACAAT 57.001 32.000 0.00 0.00 32.14 2.71
465 466 9.512588 TTTAAAATACTACGTTCCCCAACAATA 57.487 29.630 0.00 0.00 32.14 1.90
466 467 6.990341 AAATACTACGTTCCCCAACAATAC 57.010 37.500 0.00 0.00 32.14 1.89
467 468 3.339253 ACTACGTTCCCCAACAATACC 57.661 47.619 0.00 0.00 32.14 2.73
468 469 2.026915 ACTACGTTCCCCAACAATACCC 60.027 50.000 0.00 0.00 32.14 3.69
469 470 0.038599 ACGTTCCCCAACAATACCCC 59.961 55.000 0.00 0.00 32.14 4.95
470 471 1.027792 CGTTCCCCAACAATACCCCG 61.028 60.000 0.00 0.00 32.14 5.73
471 472 1.000646 TTCCCCAACAATACCCCGC 60.001 57.895 0.00 0.00 0.00 6.13
472 473 2.441348 CCCCAACAATACCCCGCC 60.441 66.667 0.00 0.00 0.00 6.13
473 474 2.441348 CCCAACAATACCCCGCCC 60.441 66.667 0.00 0.00 0.00 6.13
474 475 2.357056 CCAACAATACCCCGCCCA 59.643 61.111 0.00 0.00 0.00 5.36
475 476 2.049767 CCAACAATACCCCGCCCAC 61.050 63.158 0.00 0.00 0.00 4.61
476 477 1.001393 CAACAATACCCCGCCCACT 60.001 57.895 0.00 0.00 0.00 4.00
477 478 1.001393 AACAATACCCCGCCCACTG 60.001 57.895 0.00 0.00 0.00 3.66
478 479 2.124320 CAATACCCCGCCCACTGG 60.124 66.667 0.00 0.00 0.00 4.00
479 480 2.285818 AATACCCCGCCCACTGGA 60.286 61.111 0.00 0.00 0.00 3.86
480 481 2.375345 AATACCCCGCCCACTGGAG 61.375 63.158 0.00 0.00 0.00 3.86
494 495 4.883354 GGAGCCCTCCGCCAATGG 62.883 72.222 0.00 0.00 40.36 3.16
495 496 4.115199 GAGCCCTCCGCCAATGGT 62.115 66.667 0.00 0.00 38.78 3.55
496 497 4.115199 AGCCCTCCGCCAATGGTC 62.115 66.667 0.00 0.00 38.78 4.02
498 499 4.856801 CCCTCCGCCAATGGTCCG 62.857 72.222 0.00 0.00 0.00 4.79
499 500 3.781307 CCTCCGCCAATGGTCCGA 61.781 66.667 0.00 0.00 0.00 4.55
500 501 2.505982 CTCCGCCAATGGTCCGAT 59.494 61.111 0.00 0.00 0.00 4.18
501 502 1.153168 CTCCGCCAATGGTCCGATT 60.153 57.895 0.00 0.00 0.00 3.34
502 503 0.748005 CTCCGCCAATGGTCCGATTT 60.748 55.000 0.00 0.00 0.00 2.17
503 504 0.542333 TCCGCCAATGGTCCGATTTA 59.458 50.000 0.00 0.00 0.00 1.40
504 505 0.661020 CCGCCAATGGTCCGATTTAC 59.339 55.000 0.00 0.00 0.00 2.01
505 506 0.303493 CGCCAATGGTCCGATTTACG 59.697 55.000 0.00 0.00 42.18 3.18
506 507 1.375551 GCCAATGGTCCGATTTACGT 58.624 50.000 0.00 0.00 40.78 3.57
507 508 1.741145 GCCAATGGTCCGATTTACGTT 59.259 47.619 0.00 0.00 40.78 3.99
508 509 2.162809 GCCAATGGTCCGATTTACGTTT 59.837 45.455 0.00 0.00 40.78 3.60
509 510 3.753842 CCAATGGTCCGATTTACGTTTG 58.246 45.455 0.00 0.00 40.78 2.93
510 511 3.437395 CCAATGGTCCGATTTACGTTTGA 59.563 43.478 0.00 0.00 40.78 2.69
511 512 4.436852 CCAATGGTCCGATTTACGTTTGAG 60.437 45.833 0.00 0.00 40.78 3.02
512 513 2.690786 TGGTCCGATTTACGTTTGAGG 58.309 47.619 0.00 0.00 40.78 3.86
513 514 2.004733 GGTCCGATTTACGTTTGAGGG 58.995 52.381 0.00 0.00 40.78 4.30
514 515 2.004733 GTCCGATTTACGTTTGAGGGG 58.995 52.381 0.00 0.00 40.78 4.79
515 516 1.065998 TCCGATTTACGTTTGAGGGGG 60.066 52.381 0.00 0.00 40.78 5.40
516 517 1.339342 CCGATTTACGTTTGAGGGGGT 60.339 52.381 0.00 0.00 40.78 4.95
517 518 2.004733 CGATTTACGTTTGAGGGGGTC 58.995 52.381 0.00 0.00 37.22 4.46
518 519 2.004733 GATTTACGTTTGAGGGGGTCG 58.995 52.381 0.00 0.00 0.00 4.79
519 520 0.035176 TTTACGTTTGAGGGGGTCGG 59.965 55.000 0.00 0.00 0.00 4.79
520 521 0.831288 TTACGTTTGAGGGGGTCGGA 60.831 55.000 0.00 0.00 0.00 4.55
521 522 0.615544 TACGTTTGAGGGGGTCGGAT 60.616 55.000 0.00 0.00 0.00 4.18
522 523 1.298667 CGTTTGAGGGGGTCGGATT 59.701 57.895 0.00 0.00 0.00 3.01
523 524 0.322187 CGTTTGAGGGGGTCGGATTT 60.322 55.000 0.00 0.00 0.00 2.17
524 525 1.173913 GTTTGAGGGGGTCGGATTTG 58.826 55.000 0.00 0.00 0.00 2.32
525 526 0.039035 TTTGAGGGGGTCGGATTTGG 59.961 55.000 0.00 0.00 0.00 3.28
526 527 1.137594 TTGAGGGGGTCGGATTTGGT 61.138 55.000 0.00 0.00 0.00 3.67
527 528 0.252789 TGAGGGGGTCGGATTTGGTA 60.253 55.000 0.00 0.00 0.00 3.25
528 529 0.468648 GAGGGGGTCGGATTTGGTAG 59.531 60.000 0.00 0.00 0.00 3.18
529 530 0.043637 AGGGGGTCGGATTTGGTAGA 59.956 55.000 0.00 0.00 0.00 2.59
530 531 1.137697 GGGGGTCGGATTTGGTAGAT 58.862 55.000 0.00 0.00 0.00 1.98
531 532 1.202770 GGGGGTCGGATTTGGTAGATG 60.203 57.143 0.00 0.00 0.00 2.90
532 533 1.594331 GGGTCGGATTTGGTAGATGC 58.406 55.000 0.00 0.00 0.00 3.91
533 534 1.141053 GGGTCGGATTTGGTAGATGCT 59.859 52.381 0.00 0.00 0.00 3.79
534 535 2.484889 GGTCGGATTTGGTAGATGCTC 58.515 52.381 0.00 0.00 0.00 4.26
535 536 2.103263 GGTCGGATTTGGTAGATGCTCT 59.897 50.000 0.00 0.00 0.00 4.09
536 537 3.432326 GGTCGGATTTGGTAGATGCTCTT 60.432 47.826 0.00 0.00 0.00 2.85
537 538 4.202223 GGTCGGATTTGGTAGATGCTCTTA 60.202 45.833 0.00 0.00 0.00 2.10
538 539 4.985409 GTCGGATTTGGTAGATGCTCTTAG 59.015 45.833 0.00 0.00 0.00 2.18
539 540 4.649674 TCGGATTTGGTAGATGCTCTTAGT 59.350 41.667 0.00 0.00 0.00 2.24
540 541 4.747108 CGGATTTGGTAGATGCTCTTAGTG 59.253 45.833 0.00 0.00 0.00 2.74
541 542 5.451937 CGGATTTGGTAGATGCTCTTAGTGA 60.452 44.000 0.00 0.00 0.00 3.41
542 543 6.529220 GGATTTGGTAGATGCTCTTAGTGAT 58.471 40.000 0.00 0.00 0.00 3.06
543 544 6.648725 GGATTTGGTAGATGCTCTTAGTGATC 59.351 42.308 0.00 0.00 0.00 2.92
544 545 4.837896 TGGTAGATGCTCTTAGTGATCG 57.162 45.455 0.00 0.00 0.00 3.69
545 546 4.207955 TGGTAGATGCTCTTAGTGATCGT 58.792 43.478 0.00 0.00 0.00 3.73
546 547 4.645136 TGGTAGATGCTCTTAGTGATCGTT 59.355 41.667 0.00 0.00 0.00 3.85
547 548 4.979197 GGTAGATGCTCTTAGTGATCGTTG 59.021 45.833 0.00 0.00 0.00 4.10
548 549 4.727507 AGATGCTCTTAGTGATCGTTGT 57.272 40.909 0.00 0.00 0.00 3.32
549 550 5.836821 AGATGCTCTTAGTGATCGTTGTA 57.163 39.130 0.00 0.00 0.00 2.41
550 551 5.826586 AGATGCTCTTAGTGATCGTTGTAG 58.173 41.667 0.00 0.00 0.00 2.74
551 552 5.590663 AGATGCTCTTAGTGATCGTTGTAGA 59.409 40.000 0.00 0.00 0.00 2.59
552 553 5.236655 TGCTCTTAGTGATCGTTGTAGAG 57.763 43.478 0.00 0.00 0.00 2.43
553 554 4.096532 TGCTCTTAGTGATCGTTGTAGAGG 59.903 45.833 11.30 0.00 0.00 3.69
554 555 4.498345 GCTCTTAGTGATCGTTGTAGAGGG 60.498 50.000 11.30 0.00 0.00 4.30
555 556 3.952323 TCTTAGTGATCGTTGTAGAGGGG 59.048 47.826 0.00 0.00 0.00 4.79
556 557 2.526888 AGTGATCGTTGTAGAGGGGA 57.473 50.000 0.00 0.00 0.00 4.81
557 558 2.100989 AGTGATCGTTGTAGAGGGGAC 58.899 52.381 0.00 0.00 0.00 4.46
558 559 1.822990 GTGATCGTTGTAGAGGGGACA 59.177 52.381 0.00 0.00 0.00 4.02
559 560 2.431057 GTGATCGTTGTAGAGGGGACAT 59.569 50.000 0.00 0.00 0.00 3.06
560 561 3.635373 GTGATCGTTGTAGAGGGGACATA 59.365 47.826 0.00 0.00 0.00 2.29
561 562 4.281182 GTGATCGTTGTAGAGGGGACATAT 59.719 45.833 0.00 0.00 0.00 1.78
562 563 4.280929 TGATCGTTGTAGAGGGGACATATG 59.719 45.833 0.00 0.00 0.00 1.78
563 564 3.905968 TCGTTGTAGAGGGGACATATGA 58.094 45.455 10.38 0.00 0.00 2.15
564 565 3.635373 TCGTTGTAGAGGGGACATATGAC 59.365 47.826 10.38 2.65 0.00 3.06
565 566 3.383505 CGTTGTAGAGGGGACATATGACA 59.616 47.826 10.38 0.00 0.00 3.58
566 567 4.039245 CGTTGTAGAGGGGACATATGACAT 59.961 45.833 10.38 0.00 0.00 3.06
567 568 5.243060 CGTTGTAGAGGGGACATATGACATA 59.757 44.000 10.38 0.00 0.00 2.29
568 569 6.071334 CGTTGTAGAGGGGACATATGACATAT 60.071 42.308 10.38 1.87 0.00 1.78
569 570 7.122204 CGTTGTAGAGGGGACATATGACATATA 59.878 40.741 10.38 0.00 0.00 0.86
570 571 7.956328 TGTAGAGGGGACATATGACATATAC 57.044 40.000 10.38 8.99 0.00 1.47
571 572 7.475299 TGTAGAGGGGACATATGACATATACA 58.525 38.462 10.38 11.22 0.00 2.29
572 573 7.615757 TGTAGAGGGGACATATGACATATACAG 59.384 40.741 10.38 0.00 0.00 2.74
573 574 6.805150 AGAGGGGACATATGACATATACAGA 58.195 40.000 10.38 0.00 0.00 3.41
574 575 6.665680 AGAGGGGACATATGACATATACAGAC 59.334 42.308 10.38 0.25 0.00 3.51
575 576 6.322931 AGGGGACATATGACATATACAGACA 58.677 40.000 10.38 0.00 0.00 3.41
576 577 6.962311 AGGGGACATATGACATATACAGACAT 59.038 38.462 10.38 0.00 0.00 3.06
577 578 7.044181 GGGGACATATGACATATACAGACATG 58.956 42.308 10.38 0.00 0.00 3.21
578 579 7.310671 GGGGACATATGACATATACAGACATGT 60.311 40.741 10.38 0.00 43.76 3.21
579 580 8.097038 GGGACATATGACATATACAGACATGTT 58.903 37.037 10.38 0.00 41.01 2.71
580 581 9.494271 GGACATATGACATATACAGACATGTTT 57.506 33.333 10.38 0.00 41.01 2.83
582 583 9.196552 ACATATGACATATACAGACATGTTTCG 57.803 33.333 10.38 0.00 41.01 3.46
583 584 9.410556 CATATGACATATACAGACATGTTTCGA 57.589 33.333 7.64 0.00 41.01 3.71
584 585 7.936950 ATGACATATACAGACATGTTTCGAG 57.063 36.000 0.00 0.00 41.01 4.04
585 586 6.863275 TGACATATACAGACATGTTTCGAGT 58.137 36.000 0.00 0.00 41.01 4.18
586 587 6.972901 TGACATATACAGACATGTTTCGAGTC 59.027 38.462 0.00 2.62 41.01 3.36
587 588 6.863275 ACATATACAGACATGTTTCGAGTCA 58.137 36.000 0.00 0.00 41.01 3.41
588 589 7.492524 ACATATACAGACATGTTTCGAGTCAT 58.507 34.615 0.00 2.22 41.01 3.06
589 590 7.649705 ACATATACAGACATGTTTCGAGTCATC 59.350 37.037 0.00 0.00 41.01 2.92
590 591 3.245797 ACAGACATGTTTCGAGTCATCG 58.754 45.455 0.00 0.00 43.34 3.84
591 592 4.461453 ACAGACATGTTTCGAGTCATCGC 61.461 47.826 0.00 0.48 42.30 4.58
598 599 3.308008 CGAGTCATCGCGCAGTCG 61.308 66.667 8.75 8.35 42.97 4.18
599 600 2.100410 GAGTCATCGCGCAGTCGA 59.900 61.111 8.75 0.00 39.85 4.20
600 601 2.202492 AGTCATCGCGCAGTCGAC 60.202 61.111 7.70 7.70 38.62 4.20
601 602 3.598562 GTCATCGCGCAGTCGACG 61.599 66.667 10.46 6.47 38.62 5.12
602 603 3.795342 TCATCGCGCAGTCGACGA 61.795 61.111 10.46 3.44 43.76 4.20
603 604 3.598562 CATCGCGCAGTCGACGAC 61.599 66.667 20.25 20.25 42.98 4.34
604 605 4.831307 ATCGCGCAGTCGACGACC 62.831 66.667 23.76 9.14 42.98 4.79
608 609 4.337060 CGCAGTCGACGACCCACA 62.337 66.667 23.76 0.00 38.10 4.17
609 610 2.028484 GCAGTCGACGACCCACAA 59.972 61.111 23.76 0.00 32.18 3.33
610 611 1.374252 GCAGTCGACGACCCACAAT 60.374 57.895 23.76 1.63 32.18 2.71
611 612 0.949105 GCAGTCGACGACCCACAATT 60.949 55.000 23.76 0.86 32.18 2.32
612 613 1.508632 CAGTCGACGACCCACAATTT 58.491 50.000 23.76 0.07 32.18 1.82
613 614 1.194547 CAGTCGACGACCCACAATTTG 59.805 52.381 23.76 9.53 32.18 2.32
614 615 0.110373 GTCGACGACCCACAATTTGC 60.110 55.000 17.25 0.00 0.00 3.68
615 616 0.533085 TCGACGACCCACAATTTGCA 60.533 50.000 0.00 0.00 0.00 4.08
616 617 0.521291 CGACGACCCACAATTTGCAT 59.479 50.000 0.00 0.00 0.00 3.96
617 618 1.728825 CGACGACCCACAATTTGCATG 60.729 52.381 0.00 0.00 0.00 4.06
618 619 0.038343 ACGACCCACAATTTGCATGC 60.038 50.000 11.82 11.82 0.00 4.06
619 620 0.737019 CGACCCACAATTTGCATGCC 60.737 55.000 16.68 0.00 0.00 4.40
620 621 0.321021 GACCCACAATTTGCATGCCA 59.679 50.000 16.68 0.00 0.00 4.92
621 622 0.035176 ACCCACAATTTGCATGCCAC 59.965 50.000 16.68 0.00 0.00 5.01
622 623 0.322322 CCCACAATTTGCATGCCACT 59.678 50.000 16.68 0.00 0.00 4.00
623 624 1.434555 CCACAATTTGCATGCCACTG 58.565 50.000 16.68 9.74 0.00 3.66
624 625 0.793861 CACAATTTGCATGCCACTGC 59.206 50.000 16.68 0.00 42.62 4.40
625 626 0.320946 ACAATTTGCATGCCACTGCC 60.321 50.000 16.68 0.00 41.58 4.85
626 627 1.079681 AATTTGCATGCCACTGCCG 60.080 52.632 16.68 0.00 41.58 5.69
627 628 3.652539 ATTTGCATGCCACTGCCGC 62.653 57.895 16.68 0.00 41.58 6.53
630 631 4.360964 GCATGCCACTGCCGCAAA 62.361 61.111 6.36 0.00 40.22 3.68
631 632 2.574929 CATGCCACTGCCGCAAAT 59.425 55.556 0.00 0.00 40.22 2.32
632 633 1.517694 CATGCCACTGCCGCAAATC 60.518 57.895 0.00 0.00 40.22 2.17
633 634 2.713967 ATGCCACTGCCGCAAATCC 61.714 57.895 0.00 0.00 40.22 3.01
634 635 4.133796 GCCACTGCCGCAAATCCC 62.134 66.667 0.00 0.00 0.00 3.85
635 636 2.361610 CCACTGCCGCAAATCCCT 60.362 61.111 0.00 0.00 0.00 4.20
636 637 1.978617 CCACTGCCGCAAATCCCTT 60.979 57.895 0.00 0.00 0.00 3.95
637 638 1.508088 CACTGCCGCAAATCCCTTC 59.492 57.895 0.00 0.00 0.00 3.46
638 639 1.678970 ACTGCCGCAAATCCCTTCC 60.679 57.895 0.00 0.00 0.00 3.46
639 640 1.678635 CTGCCGCAAATCCCTTCCA 60.679 57.895 0.00 0.00 0.00 3.53
640 641 1.000233 TGCCGCAAATCCCTTCCAT 60.000 52.632 0.00 0.00 0.00 3.41
641 642 0.257328 TGCCGCAAATCCCTTCCATA 59.743 50.000 0.00 0.00 0.00 2.74
648 649 4.279169 CGCAAATCCCTTCCATATGACAAT 59.721 41.667 3.65 0.00 0.00 2.71
655 656 5.104941 TCCCTTCCATATGACAATATAGCCG 60.105 44.000 3.65 0.00 0.00 5.52
659 660 3.873361 CCATATGACAATATAGCCGGCAG 59.127 47.826 31.54 13.06 0.00 4.85
697 698 2.034685 CCATGCTCTGCTGATGAATTGG 59.965 50.000 0.00 0.00 0.00 3.16
716 717 3.335748 TGGCTCCCATATTTGATACCCT 58.664 45.455 0.00 0.00 0.00 4.34
872 4844 0.320334 CAAAATCCCCAAACCCGTGC 60.320 55.000 0.00 0.00 0.00 5.34
943 4918 0.111639 TCCCCAAAGGACCCGAAAAG 59.888 55.000 0.00 0.00 40.93 2.27
1061 5051 2.829003 CTACGAGGAGGAGCGCCA 60.829 66.667 9.88 0.00 36.29 5.69
1108 5098 1.104630 CCTCGAGGTTGGTACTCTCC 58.895 60.000 24.04 0.00 32.83 3.71
1124 5114 0.889186 CTCCCACGGAAAACACCCAG 60.889 60.000 0.00 0.00 0.00 4.45
1132 5122 2.406452 GAAAACACCCAGCGCACCAG 62.406 60.000 11.47 0.00 0.00 4.00
1153 5143 3.210012 AACCAGCACGGGCCAATCT 62.210 57.895 5.73 0.00 42.56 2.40
1174 5164 1.562008 CCTTCCTTCTCTCCCCTTTCC 59.438 57.143 0.00 0.00 0.00 3.13
1178 5168 2.115427 CCTTCTCTCCCCTTTCCTCTC 58.885 57.143 0.00 0.00 0.00 3.20
1179 5169 2.115427 CTTCTCTCCCCTTTCCTCTCC 58.885 57.143 0.00 0.00 0.00 3.71
1180 5170 1.398799 TCTCTCCCCTTTCCTCTCCT 58.601 55.000 0.00 0.00 0.00 3.69
1181 5171 1.289530 TCTCTCCCCTTTCCTCTCCTC 59.710 57.143 0.00 0.00 0.00 3.71
1182 5172 0.340208 TCTCCCCTTTCCTCTCCTCC 59.660 60.000 0.00 0.00 0.00 4.30
1183 5173 0.692756 CTCCCCTTTCCTCTCCTCCC 60.693 65.000 0.00 0.00 0.00 4.30
1184 5174 1.162951 TCCCCTTTCCTCTCCTCCCT 61.163 60.000 0.00 0.00 0.00 4.20
1185 5175 0.253394 CCCCTTTCCTCTCCTCCCTT 60.253 60.000 0.00 0.00 0.00 3.95
1186 5176 1.675007 CCCTTTCCTCTCCTCCCTTT 58.325 55.000 0.00 0.00 0.00 3.11
1187 5177 1.996291 CCCTTTCCTCTCCTCCCTTTT 59.004 52.381 0.00 0.00 0.00 2.27
1188 5178 2.025793 CCCTTTCCTCTCCTCCCTTTTC 60.026 54.545 0.00 0.00 0.00 2.29
1189 5179 2.025793 CCTTTCCTCTCCTCCCTTTTCC 60.026 54.545 0.00 0.00 0.00 3.13
1190 5180 2.433444 TTCCTCTCCTCCCTTTTCCA 57.567 50.000 0.00 0.00 0.00 3.53
1191 5181 1.958288 TCCTCTCCTCCCTTTTCCAG 58.042 55.000 0.00 0.00 0.00 3.86
1192 5182 1.437149 TCCTCTCCTCCCTTTTCCAGA 59.563 52.381 0.00 0.00 0.00 3.86
1225 5215 3.243877 CGAAAGATGAGTCATTTCGCGAT 59.756 43.478 21.95 0.00 45.76 4.58
1242 5232 1.670087 CGATGATACCCACTGCCGATC 60.670 57.143 0.00 0.00 0.00 3.69
1280 5283 1.963747 CGTGGCTTCGGATTTGTTTC 58.036 50.000 0.00 0.00 0.00 2.78
1281 5284 1.535462 CGTGGCTTCGGATTTGTTTCT 59.465 47.619 0.00 0.00 0.00 2.52
1283 5286 3.187637 CGTGGCTTCGGATTTGTTTCTAA 59.812 43.478 0.00 0.00 0.00 2.10
1314 5317 1.228862 TTTGCCTCTTGCCCCCTTC 60.229 57.895 0.00 0.00 40.16 3.46
1435 5440 1.880894 CGGTGTTCTAGTGAGGCGA 59.119 57.895 0.00 0.00 0.00 5.54
1446 5451 2.436824 GAGGCGAGGGCTTCAACC 60.437 66.667 0.00 0.00 44.13 3.77
1447 5452 2.930562 AGGCGAGGGCTTCAACCT 60.931 61.111 2.70 2.70 42.18 3.50
1453 5458 4.043200 GGGCTTCAACCTGTGCGC 62.043 66.667 0.00 0.00 0.00 6.09
1481 5486 3.002348 GTGGGTTGATTCGATCGATTTCC 59.998 47.826 20.18 16.82 0.00 3.13
1495 5500 5.902613 TCGATTTCCTTGATTTTGCAGAT 57.097 34.783 0.00 0.00 0.00 2.90
1589 5594 1.071228 ACCACCGTTTCCTACAAGGAC 59.929 52.381 0.00 0.00 45.78 3.85
1598 5603 1.476891 TCCTACAAGGACGATGTGAGC 59.523 52.381 0.00 0.00 40.06 4.26
1644 5649 1.468520 TGGCTTCGTTAGATTTGCTGC 59.531 47.619 0.00 0.00 0.00 5.25
1769 5889 5.466393 GCATGTAGGTCAAAAGTGCAAATTT 59.534 36.000 0.00 0.00 34.47 1.82
1827 5948 3.233507 AGTTCATGGCAACCTCAAATGT 58.766 40.909 0.00 0.00 0.00 2.71
1863 5986 4.553330 TGGGTTCCTTAGTGTCTTGATC 57.447 45.455 0.00 0.00 0.00 2.92
2025 6156 2.635714 CGGTTAGGATGGGGTTTGTAC 58.364 52.381 0.00 0.00 0.00 2.90
2029 6160 4.324719 GGTTAGGATGGGGTTTGTACATGA 60.325 45.833 0.00 0.00 0.00 3.07
2061 6192 1.077265 ATTTGGGGCCACACTCCTG 59.923 57.895 7.56 0.00 0.00 3.86
2068 6199 3.056458 CCACACTCCTGTGCCGTA 58.944 61.111 0.00 0.00 45.80 4.02
2087 6219 0.960364 AATGTGCCTGCTAACACGGG 60.960 55.000 0.00 0.00 39.71 5.28
2106 6238 5.050363 CACGGGTATGAAATATGTGTGCTAC 60.050 44.000 0.00 0.00 29.98 3.58
2148 6347 6.548321 TGTTCTGTTTCTAAATGTGGGGTAT 58.452 36.000 0.00 0.00 0.00 2.73
2153 6352 8.265055 TCTGTTTCTAAATGTGGGGTATTCTAG 58.735 37.037 0.00 0.00 0.00 2.43
2176 6375 5.833131 AGAAAATTGTTCCTTAGTGCCTTGA 59.167 36.000 0.00 0.00 0.00 3.02
2180 6379 7.775053 AATTGTTCCTTAGTGCCTTGATTTA 57.225 32.000 0.00 0.00 0.00 1.40
2245 6444 7.699812 TGATTTAATTTGTTTTTGCTTTGCCAC 59.300 29.630 0.00 0.00 0.00 5.01
2282 6481 7.968405 ACACTAGACTGTCATTTGTTTGTTTTC 59.032 33.333 10.88 0.00 0.00 2.29
2298 6497 1.223187 TTTCGCAGTTTCCCGAACTC 58.777 50.000 0.00 0.00 45.40 3.01
2307 6506 3.933332 AGTTTCCCGAACTCGATGATTTC 59.067 43.478 0.00 0.00 45.40 2.17
2424 6623 3.483421 ACCAGGGTAAGTAAAAGTGTGC 58.517 45.455 0.00 0.00 0.00 4.57
2428 6627 4.024048 CAGGGTAAGTAAAAGTGTGCACAG 60.024 45.833 22.40 0.00 0.00 3.66
2597 6796 3.826729 GGCTTGTAAGATGTTGTTCCCTT 59.173 43.478 0.00 0.00 0.00 3.95
2651 6850 5.528690 TGCAAGATCAACTAATAGTCATGGC 59.471 40.000 0.00 0.00 0.00 4.40
2823 7022 1.078848 AGGCTTCTCGATGCACCAC 60.079 57.895 0.00 0.00 33.64 4.16
2853 7052 4.176120 AGATGGGGATTCATTGGTCTTC 57.824 45.455 0.00 0.00 0.00 2.87
2917 7116 7.698506 TTTCTCTAGTTCCTCGTTAATCTGA 57.301 36.000 0.00 0.00 0.00 3.27
2980 7179 4.662278 TCTTGTCCCAACTCCCAATTAAG 58.338 43.478 0.00 0.00 0.00 1.85
2981 7180 3.449746 TGTCCCAACTCCCAATTAAGG 57.550 47.619 0.00 0.00 0.00 2.69
2982 7181 2.990284 TGTCCCAACTCCCAATTAAGGA 59.010 45.455 0.00 0.00 0.00 3.36
2997 7199 5.629079 ATTAAGGAGGTCTTTTTCTTGCG 57.371 39.130 0.00 0.00 36.93 4.85
3031 7233 8.638629 ATTAAGGAGCTCACGTAGAACTATAT 57.361 34.615 17.19 0.00 0.00 0.86
3089 7291 5.440234 TTACCTTCGAGAGAGTGCATATC 57.560 43.478 0.00 0.00 43.69 1.63
3126 7332 6.488683 CACAAACAGGGGAAAACTAGTATGAA 59.511 38.462 0.00 0.00 0.00 2.57
3154 7360 6.012858 TGCTATGTTCTTCCCTCCTTTTCTTA 60.013 38.462 0.00 0.00 0.00 2.10
3220 7433 6.634035 TCGATTTGACCAACGAGTTATATACG 59.366 38.462 0.00 0.00 0.00 3.06
3325 7539 4.695217 TGGTTAAATCGATGGTCAAAGC 57.305 40.909 0.00 0.07 0.00 3.51
3359 7614 1.611006 TGACTATCATCGAGCTGAGGC 59.389 52.381 0.00 0.00 39.06 4.70
3394 7649 6.164408 TGCATACTCAAACAGTGATAAACG 57.836 37.500 0.00 0.00 36.43 3.60
3472 7728 6.439636 TCTATAGCCCTTCACATGCTATTT 57.560 37.500 8.36 0.00 43.82 1.40
3710 8012 8.091449 CCATCAGTCCTGAAATATAGGTACTTC 58.909 40.741 0.37 0.00 43.58 3.01
3883 8188 6.421202 GTCGGCCTAGATTACATGTAAAGAAG 59.579 42.308 21.57 16.74 0.00 2.85
3959 8264 2.033801 GTGTGTCTCAAGCACTGCAATT 59.966 45.455 3.30 0.00 37.70 2.32
4035 8340 4.384846 GTGCACATGAAGCTTCTGAAATTG 59.615 41.667 26.09 15.44 0.00 2.32
4060 8365 5.131642 TGGAATGTCCAGCATAAGAGAGAAT 59.868 40.000 0.00 0.00 42.67 2.40
4064 8369 4.713814 TGTCCAGCATAAGAGAGAATCACT 59.286 41.667 0.00 0.00 37.77 3.41
4077 8382 3.597255 AGAATCACTGCTCATGTCACTG 58.403 45.455 0.00 0.00 0.00 3.66
4080 8385 1.413812 TCACTGCTCATGTCACTGTGT 59.586 47.619 7.79 0.00 35.50 3.72
4099 8404 6.765989 ACTGTGTGTACATGAAGCTTCTAAAA 59.234 34.615 26.09 7.35 35.97 1.52
4102 8407 9.278978 TGTGTGTACATGAAGCTTCTAAAATTA 57.721 29.630 26.09 5.44 0.00 1.40
4111 8416 6.150307 TGAAGCTTCTAAAATTATGGAACGCA 59.850 34.615 26.09 0.00 0.00 5.24
4122 8427 1.890876 TGGAACGCACAAGCTATGTT 58.109 45.000 0.00 0.00 41.46 2.71
4137 8442 7.443575 ACAAGCTATGTTAATATTCCTCAGCTG 59.556 37.037 7.63 7.63 40.06 4.24
4178 8483 9.593134 CTCTAGTTTACATCAAAGCTGACTAAT 57.407 33.333 0.00 0.00 33.30 1.73
4211 8516 5.147330 TGTACAAGACAAATGATCCGAGT 57.853 39.130 0.00 0.00 34.15 4.18
4212 8517 6.275494 TGTACAAGACAAATGATCCGAGTA 57.725 37.500 0.00 0.00 34.15 2.59
4214 8519 6.756542 TGTACAAGACAAATGATCCGAGTATG 59.243 38.462 0.00 0.00 34.15 2.39
4215 8520 4.572389 ACAAGACAAATGATCCGAGTATGC 59.428 41.667 0.00 0.00 0.00 3.14
4216 8521 4.679373 AGACAAATGATCCGAGTATGCT 57.321 40.909 0.00 0.00 0.00 3.79
4220 8525 4.752101 ACAAATGATCCGAGTATGCTAAGC 59.248 41.667 0.00 0.00 0.00 3.09
4225 8530 3.111853 TCCGAGTATGCTAAGCCAATG 57.888 47.619 0.00 0.00 0.00 2.82
4334 8640 2.165030 GCTTGCATTAACACTGCCAGAT 59.835 45.455 0.00 0.00 38.89 2.90
4379 8685 3.181501 CGGTTGCTGAAGAAGTTGACAAA 60.182 43.478 0.00 0.00 0.00 2.83
4381 8687 3.698029 TGCTGAAGAAGTTGACAAAGC 57.302 42.857 0.00 0.00 0.00 3.51
4397 8703 5.880332 TGACAAAGCTTTACTCATATCACCC 59.120 40.000 12.25 0.00 0.00 4.61
4403 8709 4.796618 GCTTTACTCATATCACCCGAGTCC 60.797 50.000 0.00 0.00 40.41 3.85
4423 8729 0.601558 GTGTCCGTAGTCTCCAGCAA 59.398 55.000 0.00 0.00 0.00 3.91
4425 8731 1.899814 TGTCCGTAGTCTCCAGCAAAT 59.100 47.619 0.00 0.00 0.00 2.32
4426 8732 2.301870 TGTCCGTAGTCTCCAGCAAATT 59.698 45.455 0.00 0.00 0.00 1.82
4434 8740 5.441718 AGTCTCCAGCAAATTAAGATCCA 57.558 39.130 0.00 0.00 0.00 3.41
4497 8803 1.988107 TCTCTGACATGGAAGGCCTTT 59.012 47.619 21.54 2.04 34.31 3.11
4559 8865 3.370953 GGAACCTATTGATGCAGTCTGGT 60.371 47.826 1.14 0.00 0.00 4.00
4562 8868 2.569059 CTATTGATGCAGTCTGGTGGG 58.431 52.381 1.14 0.00 0.00 4.61
4567 8873 2.034687 GCAGTCTGGTGGGCACAT 59.965 61.111 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.562973 TAAAGGAGGGAGGGGGAGGC 62.563 65.000 0.00 0.00 0.00 4.70
19 20 0.272235 ATAAAGGAGGGAGGGGGAGG 59.728 60.000 0.00 0.00 0.00 4.30
20 21 3.586859 ATATAAAGGAGGGAGGGGGAG 57.413 52.381 0.00 0.00 0.00 4.30
21 22 3.245875 CGTATATAAAGGAGGGAGGGGGA 60.246 52.174 0.00 0.00 0.00 4.81
22 23 3.105283 CGTATATAAAGGAGGGAGGGGG 58.895 54.545 0.00 0.00 0.00 5.40
23 24 3.105283 CCGTATATAAAGGAGGGAGGGG 58.895 54.545 0.37 0.00 0.00 4.79
24 25 3.105283 CCCGTATATAAAGGAGGGAGGG 58.895 54.545 7.00 0.00 41.26 4.30
25 26 3.105283 CCCCGTATATAAAGGAGGGAGG 58.895 54.545 7.00 0.00 41.26 4.30
26 27 2.500504 GCCCCGTATATAAAGGAGGGAG 59.499 54.545 7.00 0.00 41.26 4.30
27 28 2.158127 TGCCCCGTATATAAAGGAGGGA 60.158 50.000 7.00 5.54 41.26 4.20
28 29 2.236395 CTGCCCCGTATATAAAGGAGGG 59.764 54.545 7.00 0.00 38.59 4.30
29 30 2.236395 CCTGCCCCGTATATAAAGGAGG 59.764 54.545 7.00 7.49 0.00 4.30
30 31 2.236395 CCCTGCCCCGTATATAAAGGAG 59.764 54.545 7.00 0.00 0.00 3.69
31 32 2.262637 CCCTGCCCCGTATATAAAGGA 58.737 52.381 7.00 0.00 0.00 3.36
32 33 1.280998 CCCCTGCCCCGTATATAAAGG 59.719 57.143 0.00 0.00 0.00 3.11
33 34 1.280998 CCCCCTGCCCCGTATATAAAG 59.719 57.143 0.00 0.00 0.00 1.85
34 35 1.364269 CCCCCTGCCCCGTATATAAA 58.636 55.000 0.00 0.00 0.00 1.40
35 36 1.202769 GCCCCCTGCCCCGTATATAA 61.203 60.000 0.00 0.00 0.00 0.98
36 37 1.614226 GCCCCCTGCCCCGTATATA 60.614 63.158 0.00 0.00 0.00 0.86
37 38 2.933834 GCCCCCTGCCCCGTATAT 60.934 66.667 0.00 0.00 0.00 0.86
38 39 4.500826 TGCCCCCTGCCCCGTATA 62.501 66.667 0.00 0.00 40.16 1.47
50 51 1.198759 TCTGTGTTCTAGGGTGCCCC 61.199 60.000 3.17 2.16 45.90 5.80
51 52 0.690762 TTCTGTGTTCTAGGGTGCCC 59.309 55.000 0.00 0.00 0.00 5.36
52 53 1.348036 ACTTCTGTGTTCTAGGGTGCC 59.652 52.381 0.00 0.00 0.00 5.01
53 54 2.808543 CAACTTCTGTGTTCTAGGGTGC 59.191 50.000 0.00 0.00 0.00 5.01
54 55 4.336889 TCAACTTCTGTGTTCTAGGGTG 57.663 45.455 0.00 0.00 0.00 4.61
55 56 4.841246 AGATCAACTTCTGTGTTCTAGGGT 59.159 41.667 0.00 0.00 0.00 4.34
56 57 5.413309 AGATCAACTTCTGTGTTCTAGGG 57.587 43.478 0.00 0.00 0.00 3.53
57 58 7.064016 GCTAAAGATCAACTTCTGTGTTCTAGG 59.936 40.741 0.00 0.00 37.93 3.02
58 59 7.064016 GGCTAAAGATCAACTTCTGTGTTCTAG 59.936 40.741 0.00 0.00 37.93 2.43
59 60 6.874134 GGCTAAAGATCAACTTCTGTGTTCTA 59.126 38.462 0.00 0.00 37.93 2.10
60 61 5.703130 GGCTAAAGATCAACTTCTGTGTTCT 59.297 40.000 0.00 0.00 37.93 3.01
61 62 5.389935 CGGCTAAAGATCAACTTCTGTGTTC 60.390 44.000 0.00 0.00 37.93 3.18
62 63 4.452455 CGGCTAAAGATCAACTTCTGTGTT 59.548 41.667 0.00 0.00 37.93 3.32
63 64 3.997021 CGGCTAAAGATCAACTTCTGTGT 59.003 43.478 0.00 0.00 37.93 3.72
64 65 3.997021 ACGGCTAAAGATCAACTTCTGTG 59.003 43.478 0.00 0.00 37.93 3.66
65 66 3.997021 CACGGCTAAAGATCAACTTCTGT 59.003 43.478 0.00 0.00 37.93 3.41
66 67 3.997021 ACACGGCTAAAGATCAACTTCTG 59.003 43.478 0.00 0.00 37.93 3.02
67 68 3.997021 CACACGGCTAAAGATCAACTTCT 59.003 43.478 0.00 0.00 37.93 2.85
68 69 3.424962 GCACACGGCTAAAGATCAACTTC 60.425 47.826 0.00 0.00 37.41 3.01
69 70 2.484264 GCACACGGCTAAAGATCAACTT 59.516 45.455 0.00 0.00 39.02 2.66
70 71 2.076863 GCACACGGCTAAAGATCAACT 58.923 47.619 0.00 0.00 40.25 3.16
71 72 1.201921 CGCACACGGCTAAAGATCAAC 60.202 52.381 0.00 0.00 41.67 3.18
72 73 1.075542 CGCACACGGCTAAAGATCAA 58.924 50.000 0.00 0.00 41.67 2.57
73 74 2.749541 CGCACACGGCTAAAGATCA 58.250 52.632 0.00 0.00 41.67 2.92
91 92 2.366153 TTTCTGTGGAAGGGGGCACC 62.366 60.000 0.00 0.00 39.51 5.01
92 93 1.152830 TTTCTGTGGAAGGGGGCAC 59.847 57.895 0.00 0.00 32.61 5.01
93 94 1.152830 GTTTCTGTGGAAGGGGGCA 59.847 57.895 0.00 0.00 32.61 5.36
94 95 1.152830 TGTTTCTGTGGAAGGGGGC 59.847 57.895 0.00 0.00 32.61 5.80
95 96 0.184933 TGTGTTTCTGTGGAAGGGGG 59.815 55.000 0.00 0.00 32.61 5.40
96 97 1.133792 AGTGTGTTTCTGTGGAAGGGG 60.134 52.381 0.00 0.00 32.61 4.79
97 98 2.348411 AGTGTGTTTCTGTGGAAGGG 57.652 50.000 0.00 0.00 32.61 3.95
98 99 4.881850 ACTAAAGTGTGTTTCTGTGGAAGG 59.118 41.667 0.00 0.00 32.61 3.46
99 100 5.584649 TGACTAAAGTGTGTTTCTGTGGAAG 59.415 40.000 0.00 0.00 32.61 3.46
100 101 5.492895 TGACTAAAGTGTGTTTCTGTGGAA 58.507 37.500 0.00 0.00 0.00 3.53
101 102 5.092554 TGACTAAAGTGTGTTTCTGTGGA 57.907 39.130 0.00 0.00 0.00 4.02
102 103 7.411912 CGATATGACTAAAGTGTGTTTCTGTGG 60.412 40.741 0.00 0.00 0.00 4.17
103 104 7.116376 ACGATATGACTAAAGTGTGTTTCTGTG 59.884 37.037 0.00 0.00 0.00 3.66
104 105 7.152645 ACGATATGACTAAAGTGTGTTTCTGT 58.847 34.615 0.00 0.00 0.00 3.41
105 106 7.461546 CGACGATATGACTAAAGTGTGTTTCTG 60.462 40.741 0.00 0.00 0.00 3.02
106 107 6.527023 CGACGATATGACTAAAGTGTGTTTCT 59.473 38.462 0.00 0.00 0.00 2.52
107 108 6.307318 ACGACGATATGACTAAAGTGTGTTTC 59.693 38.462 0.00 0.00 0.00 2.78
108 109 6.154445 ACGACGATATGACTAAAGTGTGTTT 58.846 36.000 0.00 0.00 0.00 2.83
109 110 5.706916 ACGACGATATGACTAAAGTGTGTT 58.293 37.500 0.00 0.00 0.00 3.32
110 111 5.306532 ACGACGATATGACTAAAGTGTGT 57.693 39.130 0.00 0.00 0.00 3.72
111 112 6.411203 CACTACGACGATATGACTAAAGTGTG 59.589 42.308 0.00 0.00 0.00 3.82
112 113 6.484540 CACTACGACGATATGACTAAAGTGT 58.515 40.000 0.00 0.00 0.00 3.55
113 114 5.395778 GCACTACGACGATATGACTAAAGTG 59.604 44.000 0.00 0.00 35.02 3.16
114 115 5.296283 AGCACTACGACGATATGACTAAAGT 59.704 40.000 0.00 0.00 0.00 2.66
115 116 5.749620 AGCACTACGACGATATGACTAAAG 58.250 41.667 0.00 0.00 0.00 1.85
116 117 5.746307 AGCACTACGACGATATGACTAAA 57.254 39.130 0.00 0.00 0.00 1.85
117 118 5.746307 AAGCACTACGACGATATGACTAA 57.254 39.130 0.00 0.00 0.00 2.24
118 119 6.073385 CCTTAAGCACTACGACGATATGACTA 60.073 42.308 0.00 0.00 0.00 2.59
119 120 5.277876 CCTTAAGCACTACGACGATATGACT 60.278 44.000 0.00 0.00 0.00 3.41
120 121 4.910456 CCTTAAGCACTACGACGATATGAC 59.090 45.833 0.00 0.00 0.00 3.06
121 122 4.556104 GCCTTAAGCACTACGACGATATGA 60.556 45.833 0.00 0.00 42.97 2.15
122 123 3.669122 GCCTTAAGCACTACGACGATATG 59.331 47.826 0.00 0.00 42.97 1.78
123 124 3.608707 CGCCTTAAGCACTACGACGATAT 60.609 47.826 0.00 0.00 44.04 1.63
124 125 2.286595 CGCCTTAAGCACTACGACGATA 60.287 50.000 0.00 0.00 44.04 2.92
125 126 1.533338 CGCCTTAAGCACTACGACGAT 60.533 52.381 0.00 0.00 44.04 3.73
126 127 0.179181 CGCCTTAAGCACTACGACGA 60.179 55.000 0.00 0.00 44.04 4.20
127 128 0.179181 TCGCCTTAAGCACTACGACG 60.179 55.000 0.00 0.00 44.04 5.12
128 129 1.918609 CTTCGCCTTAAGCACTACGAC 59.081 52.381 0.00 0.00 44.04 4.34
129 130 2.273370 CTTCGCCTTAAGCACTACGA 57.727 50.000 0.00 0.00 44.04 3.43
145 146 4.770874 TTACCGGCGCAGGGCTTC 62.771 66.667 30.14 0.00 42.94 3.86
149 150 2.818274 GAAGTTACCGGCGCAGGG 60.818 66.667 30.14 22.20 35.02 4.45
150 151 1.429148 GATGAAGTTACCGGCGCAGG 61.429 60.000 25.72 25.72 37.30 4.85
151 152 0.739462 TGATGAAGTTACCGGCGCAG 60.739 55.000 10.83 4.65 0.00 5.18
152 153 0.107897 ATGATGAAGTTACCGGCGCA 60.108 50.000 10.83 0.00 0.00 6.09
153 154 0.582005 GATGATGAAGTTACCGGCGC 59.418 55.000 0.00 0.00 0.00 6.53
154 155 1.593006 GTGATGATGAAGTTACCGGCG 59.407 52.381 0.00 0.00 0.00 6.46
155 156 1.940613 GGTGATGATGAAGTTACCGGC 59.059 52.381 0.00 0.00 0.00 6.13
156 157 2.201732 CGGTGATGATGAAGTTACCGG 58.798 52.381 0.00 0.00 45.19 5.28
158 159 3.617263 GTGACGGTGATGATGAAGTTACC 59.383 47.826 0.00 0.00 0.00 2.85
159 160 3.617263 GGTGACGGTGATGATGAAGTTAC 59.383 47.826 0.00 0.00 0.00 2.50
160 161 3.259625 TGGTGACGGTGATGATGAAGTTA 59.740 43.478 0.00 0.00 0.00 2.24
161 162 2.038426 TGGTGACGGTGATGATGAAGTT 59.962 45.455 0.00 0.00 0.00 2.66
162 163 1.623311 TGGTGACGGTGATGATGAAGT 59.377 47.619 0.00 0.00 0.00 3.01
163 164 2.002586 GTGGTGACGGTGATGATGAAG 58.997 52.381 0.00 0.00 0.00 3.02
164 165 1.671556 CGTGGTGACGGTGATGATGAA 60.672 52.381 0.00 0.00 42.18 2.57
165 166 0.108851 CGTGGTGACGGTGATGATGA 60.109 55.000 0.00 0.00 42.18 2.92
166 167 1.695893 GCGTGGTGACGGTGATGATG 61.696 60.000 0.00 0.00 46.20 3.07
167 168 1.447838 GCGTGGTGACGGTGATGAT 60.448 57.895 0.00 0.00 46.20 2.45
168 169 2.048597 GCGTGGTGACGGTGATGA 60.049 61.111 0.00 0.00 46.20 2.92
169 170 3.118454 GGCGTGGTGACGGTGATG 61.118 66.667 0.00 0.00 46.20 3.07
170 171 2.852495 GATGGCGTGGTGACGGTGAT 62.852 60.000 0.00 0.00 46.20 3.06
171 172 3.583276 GATGGCGTGGTGACGGTGA 62.583 63.158 0.00 0.00 46.20 4.02
172 173 3.118454 GATGGCGTGGTGACGGTG 61.118 66.667 0.00 0.00 46.20 4.94
173 174 4.735132 CGATGGCGTGGTGACGGT 62.735 66.667 0.00 0.00 46.20 4.83
190 191 2.062519 GAGGAAGAGTTTCGTCAGCAC 58.937 52.381 5.41 0.00 43.99 4.40
191 192 1.335964 CGAGGAAGAGTTTCGTCAGCA 60.336 52.381 9.69 0.00 44.50 4.41
192 193 1.341606 CGAGGAAGAGTTTCGTCAGC 58.658 55.000 9.69 0.00 44.50 4.26
193 194 1.983972 CCGAGGAAGAGTTTCGTCAG 58.016 55.000 9.69 4.02 44.50 3.51
194 195 0.038526 GCCGAGGAAGAGTTTCGTCA 60.039 55.000 9.69 0.00 44.50 4.35
195 196 0.736672 GGCCGAGGAAGAGTTTCGTC 60.737 60.000 0.00 1.11 42.15 4.20
196 197 1.186267 AGGCCGAGGAAGAGTTTCGT 61.186 55.000 0.00 0.00 33.98 3.85
197 198 0.458716 GAGGCCGAGGAAGAGTTTCG 60.459 60.000 0.00 0.00 33.98 3.46
198 199 0.608640 TGAGGCCGAGGAAGAGTTTC 59.391 55.000 0.00 0.00 0.00 2.78
199 200 1.056660 TTGAGGCCGAGGAAGAGTTT 58.943 50.000 0.00 0.00 0.00 2.66
200 201 0.321996 GTTGAGGCCGAGGAAGAGTT 59.678 55.000 0.00 0.00 0.00 3.01
201 202 0.543174 AGTTGAGGCCGAGGAAGAGT 60.543 55.000 0.00 0.00 0.00 3.24
202 203 0.108424 CAGTTGAGGCCGAGGAAGAG 60.108 60.000 0.00 0.00 0.00 2.85
203 204 1.544825 CCAGTTGAGGCCGAGGAAGA 61.545 60.000 0.00 0.00 0.00 2.87
204 205 1.078848 CCAGTTGAGGCCGAGGAAG 60.079 63.158 0.00 0.00 0.00 3.46
205 206 0.909610 ATCCAGTTGAGGCCGAGGAA 60.910 55.000 0.00 0.00 0.00 3.36
206 207 1.306141 ATCCAGTTGAGGCCGAGGA 60.306 57.895 0.00 0.00 0.00 3.71
207 208 1.144936 GATCCAGTTGAGGCCGAGG 59.855 63.158 0.00 0.00 0.00 4.63
208 209 0.250234 TTGATCCAGTTGAGGCCGAG 59.750 55.000 0.00 0.00 0.00 4.63
209 210 0.250234 CTTGATCCAGTTGAGGCCGA 59.750 55.000 0.00 0.00 0.00 5.54
210 211 0.250234 TCTTGATCCAGTTGAGGCCG 59.750 55.000 0.00 0.00 0.00 6.13
211 212 1.280421 ACTCTTGATCCAGTTGAGGCC 59.720 52.381 0.00 0.00 0.00 5.19
212 213 2.777832 ACTCTTGATCCAGTTGAGGC 57.222 50.000 0.00 0.00 0.00 4.70
213 214 3.056536 TCGAACTCTTGATCCAGTTGAGG 60.057 47.826 6.55 0.00 32.83 3.86
214 215 4.172505 CTCGAACTCTTGATCCAGTTGAG 58.827 47.826 6.55 9.06 32.83 3.02
215 216 3.056536 CCTCGAACTCTTGATCCAGTTGA 60.057 47.826 6.55 4.80 32.83 3.18
216 217 3.257393 CCTCGAACTCTTGATCCAGTTG 58.743 50.000 6.55 0.00 32.83 3.16
217 218 2.234908 CCCTCGAACTCTTGATCCAGTT 59.765 50.000 2.31 2.31 35.48 3.16
218 219 1.827969 CCCTCGAACTCTTGATCCAGT 59.172 52.381 0.00 0.00 0.00 4.00
219 220 2.103373 TCCCTCGAACTCTTGATCCAG 58.897 52.381 0.00 0.00 0.00 3.86
220 221 1.825474 GTCCCTCGAACTCTTGATCCA 59.175 52.381 0.00 0.00 0.00 3.41
221 222 1.202313 CGTCCCTCGAACTCTTGATCC 60.202 57.143 0.00 0.00 42.86 3.36
222 223 1.473278 ACGTCCCTCGAACTCTTGATC 59.527 52.381 0.00 0.00 42.86 2.92
223 224 1.473278 GACGTCCCTCGAACTCTTGAT 59.527 52.381 3.51 0.00 42.86 2.57
224 225 0.879765 GACGTCCCTCGAACTCTTGA 59.120 55.000 3.51 0.00 42.86 3.02
225 226 0.596577 TGACGTCCCTCGAACTCTTG 59.403 55.000 14.12 0.00 42.86 3.02
226 227 0.597072 GTGACGTCCCTCGAACTCTT 59.403 55.000 14.12 0.00 42.86 2.85
227 228 1.242665 GGTGACGTCCCTCGAACTCT 61.243 60.000 14.12 0.00 42.86 3.24
228 229 1.212229 GGTGACGTCCCTCGAACTC 59.788 63.158 14.12 0.00 42.86 3.01
229 230 3.363351 GGTGACGTCCCTCGAACT 58.637 61.111 14.12 0.00 42.86 3.01
241 242 1.299926 ACACGTTCAGCTCGGTGAC 60.300 57.895 9.25 0.00 0.00 3.67
242 243 1.299850 CACACGTTCAGCTCGGTGA 60.300 57.895 9.25 0.00 34.24 4.02
243 244 2.943345 GCACACGTTCAGCTCGGTG 61.943 63.158 9.18 9.18 34.88 4.94
244 245 2.661866 GCACACGTTCAGCTCGGT 60.662 61.111 0.00 0.00 0.00 4.69
245 246 2.661537 TGCACACGTTCAGCTCGG 60.662 61.111 5.40 0.00 0.00 4.63
246 247 1.010935 ATCTGCACACGTTCAGCTCG 61.011 55.000 5.40 0.00 0.00 5.03
247 248 0.718343 GATCTGCACACGTTCAGCTC 59.282 55.000 5.40 2.32 0.00 4.09
248 249 1.010935 CGATCTGCACACGTTCAGCT 61.011 55.000 5.40 0.00 0.00 4.24
249 250 1.417592 CGATCTGCACACGTTCAGC 59.582 57.895 4.78 1.26 0.00 4.26
250 251 1.417592 GCGATCTGCACACGTTCAG 59.582 57.895 4.93 0.00 45.45 3.02
251 252 2.371923 CGCGATCTGCACACGTTCA 61.372 57.895 0.00 0.00 46.97 3.18
252 253 2.391821 CGCGATCTGCACACGTTC 59.608 61.111 0.00 0.00 46.97 3.95
253 254 3.112075 CCGCGATCTGCACACGTT 61.112 61.111 8.23 0.00 46.97 3.99
254 255 3.971453 CTCCGCGATCTGCACACGT 62.971 63.158 8.23 0.00 46.97 4.49
255 256 3.250323 CTCCGCGATCTGCACACG 61.250 66.667 8.23 0.00 46.97 4.49
256 257 2.887568 CCTCCGCGATCTGCACAC 60.888 66.667 8.23 0.00 46.97 3.82
257 258 3.381983 ACCTCCGCGATCTGCACA 61.382 61.111 8.23 0.00 46.97 4.57
258 259 2.887568 CACCTCCGCGATCTGCAC 60.888 66.667 8.23 0.00 46.97 4.57
259 260 4.819761 GCACCTCCGCGATCTGCA 62.820 66.667 8.23 0.00 46.97 4.41
277 278 0.734942 ATCCAAGTACCGAACGCACG 60.735 55.000 0.00 0.00 0.00 5.34
278 279 0.997196 GATCCAAGTACCGAACGCAC 59.003 55.000 0.00 0.00 0.00 5.34
279 280 0.457166 CGATCCAAGTACCGAACGCA 60.457 55.000 0.00 0.00 0.00 5.24
280 281 1.143969 CCGATCCAAGTACCGAACGC 61.144 60.000 0.00 0.00 0.00 4.84
281 282 0.171903 ACCGATCCAAGTACCGAACG 59.828 55.000 0.00 0.00 0.00 3.95
282 283 1.997606 CAACCGATCCAAGTACCGAAC 59.002 52.381 0.00 0.00 0.00 3.95
283 284 1.066716 CCAACCGATCCAAGTACCGAA 60.067 52.381 0.00 0.00 0.00 4.30
284 285 0.533491 CCAACCGATCCAAGTACCGA 59.467 55.000 0.00 0.00 0.00 4.69
285 286 0.533491 TCCAACCGATCCAAGTACCG 59.467 55.000 0.00 0.00 0.00 4.02
286 287 2.802057 CGATCCAACCGATCCAAGTACC 60.802 54.545 0.00 0.00 44.07 3.34
287 288 2.470821 CGATCCAACCGATCCAAGTAC 58.529 52.381 0.00 0.00 44.07 2.73
288 289 1.202486 GCGATCCAACCGATCCAAGTA 60.202 52.381 0.00 0.00 44.07 2.24
289 290 0.462047 GCGATCCAACCGATCCAAGT 60.462 55.000 0.00 0.00 44.07 3.16
290 291 1.490693 CGCGATCCAACCGATCCAAG 61.491 60.000 0.00 0.00 44.07 3.61
291 292 1.520564 CGCGATCCAACCGATCCAA 60.521 57.895 0.00 0.00 44.07 3.53
292 293 1.950973 TTCGCGATCCAACCGATCCA 61.951 55.000 10.88 0.00 44.07 3.41
293 294 1.215655 CTTCGCGATCCAACCGATCC 61.216 60.000 10.88 0.00 44.07 3.36
294 295 0.248907 TCTTCGCGATCCAACCGATC 60.249 55.000 10.88 0.00 43.58 3.69
295 296 0.527817 GTCTTCGCGATCCAACCGAT 60.528 55.000 10.88 0.00 0.00 4.18
296 297 1.153901 GTCTTCGCGATCCAACCGA 60.154 57.895 10.88 0.00 0.00 4.69
297 298 2.505498 CGTCTTCGCGATCCAACCG 61.505 63.158 10.88 3.09 0.00 4.44
298 299 1.012486 AACGTCTTCGCGATCCAACC 61.012 55.000 10.88 0.00 41.18 3.77
299 300 0.365859 GAACGTCTTCGCGATCCAAC 59.634 55.000 10.88 5.11 41.18 3.77
300 301 1.068832 CGAACGTCTTCGCGATCCAA 61.069 55.000 10.88 0.00 42.72 3.53
301 302 1.513373 CGAACGTCTTCGCGATCCA 60.513 57.895 10.88 0.00 42.72 3.41
302 303 3.286669 CGAACGTCTTCGCGATCC 58.713 61.111 10.88 0.00 42.72 3.36
309 310 3.607209 GGTTGATGTAGTCGAACGTCTTC 59.393 47.826 10.09 4.37 36.53 2.87
310 311 3.572584 GGTTGATGTAGTCGAACGTCTT 58.427 45.455 10.09 0.00 36.53 3.01
311 312 2.413765 CGGTTGATGTAGTCGAACGTCT 60.414 50.000 10.09 0.00 44.71 4.18
312 313 1.909532 CGGTTGATGTAGTCGAACGTC 59.090 52.381 3.01 3.01 44.71 4.34
313 314 1.973138 CGGTTGATGTAGTCGAACGT 58.027 50.000 0.00 0.00 44.71 3.99
315 316 0.638746 CGCGGTTGATGTAGTCGAAC 59.361 55.000 0.00 0.00 0.00 3.95
316 317 0.241749 ACGCGGTTGATGTAGTCGAA 59.758 50.000 12.47 0.00 0.00 3.71
317 318 0.241749 AACGCGGTTGATGTAGTCGA 59.758 50.000 12.47 0.00 0.00 4.20
318 319 1.898938 TAACGCGGTTGATGTAGTCG 58.101 50.000 12.47 0.00 0.00 4.18
319 320 5.954434 TTATTAACGCGGTTGATGTAGTC 57.046 39.130 12.47 0.00 0.00 2.59
320 321 6.098367 GTTTATTAACGCGGTTGATGTAGT 57.902 37.500 12.47 0.00 0.00 2.73
349 350 1.226603 CCCTCGTAGACCGAAAGCG 60.227 63.158 0.00 0.00 46.75 4.68
350 351 1.098050 TACCCTCGTAGACCGAAAGC 58.902 55.000 0.00 0.00 46.75 3.51
351 352 2.686915 ACATACCCTCGTAGACCGAAAG 59.313 50.000 0.00 0.00 46.75 2.62
352 353 2.424601 CACATACCCTCGTAGACCGAAA 59.575 50.000 0.00 0.00 46.75 3.46
353 354 2.019249 CACATACCCTCGTAGACCGAA 58.981 52.381 0.00 0.00 46.75 4.30
354 355 1.671979 CACATACCCTCGTAGACCGA 58.328 55.000 0.00 0.00 45.00 4.69
355 356 0.666913 CCACATACCCTCGTAGACCG 59.333 60.000 0.00 0.00 38.13 4.79
356 357 1.680207 GTCCACATACCCTCGTAGACC 59.320 57.143 0.00 0.00 0.00 3.85
357 358 2.098770 GTGTCCACATACCCTCGTAGAC 59.901 54.545 0.00 0.00 0.00 2.59
358 359 2.291089 TGTGTCCACATACCCTCGTAGA 60.291 50.000 0.00 0.00 36.21 2.59
359 360 2.097036 TGTGTCCACATACCCTCGTAG 58.903 52.381 0.00 0.00 36.21 3.51
360 361 1.820519 GTGTGTCCACATACCCTCGTA 59.179 52.381 3.07 0.00 43.97 3.43
361 362 0.606604 GTGTGTCCACATACCCTCGT 59.393 55.000 3.07 0.00 43.97 4.18
362 363 0.895530 AGTGTGTCCACATACCCTCG 59.104 55.000 3.07 0.00 44.39 4.63
363 364 2.166664 GAGAGTGTGTCCACATACCCTC 59.833 54.545 3.07 5.67 44.39 4.30
364 365 2.180276 GAGAGTGTGTCCACATACCCT 58.820 52.381 3.07 0.00 44.39 4.34
365 366 1.207329 GGAGAGTGTGTCCACATACCC 59.793 57.143 3.07 0.33 44.39 3.69
366 367 1.207329 GGGAGAGTGTGTCCACATACC 59.793 57.143 3.07 5.31 44.39 2.73
367 368 1.207329 GGGGAGAGTGTGTCCACATAC 59.793 57.143 3.07 0.00 44.39 2.39
368 369 1.568504 GGGGAGAGTGTGTCCACATA 58.431 55.000 3.07 0.00 44.39 2.29
369 370 1.544825 CGGGGAGAGTGTGTCCACAT 61.545 60.000 3.07 0.00 44.39 3.21
370 371 2.207229 CGGGGAGAGTGTGTCCACA 61.207 63.158 0.00 0.00 44.39 4.17
371 372 2.657237 CGGGGAGAGTGTGTCCAC 59.343 66.667 0.00 0.00 42.17 4.02
372 373 3.311110 GCGGGGAGAGTGTGTCCA 61.311 66.667 0.00 0.00 35.57 4.02
373 374 2.997897 AGCGGGGAGAGTGTGTCC 60.998 66.667 0.00 0.00 0.00 4.02
374 375 2.574399 GAGCGGGGAGAGTGTGTC 59.426 66.667 0.00 0.00 0.00 3.67
375 376 3.374402 CGAGCGGGGAGAGTGTGT 61.374 66.667 0.00 0.00 0.00 3.72
376 377 2.932234 AACGAGCGGGGAGAGTGTG 61.932 63.158 0.00 0.00 0.00 3.82
377 378 2.600769 AACGAGCGGGGAGAGTGT 60.601 61.111 0.00 0.00 0.00 3.55
378 379 2.125912 CAACGAGCGGGGAGAGTG 60.126 66.667 0.00 0.00 0.00 3.51
379 380 4.070552 GCAACGAGCGGGGAGAGT 62.071 66.667 0.00 0.00 0.00 3.24
388 389 0.933796 GGAGAAGCATAGCAACGAGC 59.066 55.000 0.00 0.00 46.19 5.03
389 390 2.593346 AGGAGAAGCATAGCAACGAG 57.407 50.000 0.00 0.00 0.00 4.18
390 391 4.465632 TTTAGGAGAAGCATAGCAACGA 57.534 40.909 0.00 0.00 0.00 3.85
391 392 6.216569 TCTATTTAGGAGAAGCATAGCAACG 58.783 40.000 0.00 0.00 0.00 4.10
392 393 8.093927 AGATCTATTTAGGAGAAGCATAGCAAC 58.906 37.037 0.00 0.00 0.00 4.17
393 394 8.200024 AGATCTATTTAGGAGAAGCATAGCAA 57.800 34.615 0.00 0.00 0.00 3.91
394 395 7.789202 AGATCTATTTAGGAGAAGCATAGCA 57.211 36.000 0.00 0.00 0.00 3.49
395 396 7.064490 GCAAGATCTATTTAGGAGAAGCATAGC 59.936 40.741 0.00 0.00 0.00 2.97
396 397 7.275341 CGCAAGATCTATTTAGGAGAAGCATAG 59.725 40.741 0.00 0.00 43.02 2.23
397 398 7.093354 CGCAAGATCTATTTAGGAGAAGCATA 58.907 38.462 0.00 0.00 43.02 3.14
398 399 5.931146 CGCAAGATCTATTTAGGAGAAGCAT 59.069 40.000 0.00 0.00 43.02 3.79
399 400 5.163405 ACGCAAGATCTATTTAGGAGAAGCA 60.163 40.000 0.00 0.00 43.62 3.91
400 401 5.176590 CACGCAAGATCTATTTAGGAGAAGC 59.823 44.000 0.00 0.00 43.62 3.86
401 402 6.507900 TCACGCAAGATCTATTTAGGAGAAG 58.492 40.000 0.00 0.00 43.62 2.85
402 403 6.465439 TCACGCAAGATCTATTTAGGAGAA 57.535 37.500 0.00 0.00 43.62 2.87
403 404 6.568653 CGATCACGCAAGATCTATTTAGGAGA 60.569 42.308 12.06 0.00 41.74 3.71
404 405 5.570973 CGATCACGCAAGATCTATTTAGGAG 59.429 44.000 12.06 0.00 41.74 3.69
405 406 5.009710 ACGATCACGCAAGATCTATTTAGGA 59.990 40.000 12.06 0.00 41.74 2.94
406 407 5.223382 ACGATCACGCAAGATCTATTTAGG 58.777 41.667 12.06 0.32 41.74 2.69
407 408 6.524933 CCTACGATCACGCAAGATCTATTTAG 59.475 42.308 12.06 7.82 41.74 1.85
408 409 6.206048 TCCTACGATCACGCAAGATCTATTTA 59.794 38.462 12.06 0.85 41.74 1.40
409 410 5.009710 TCCTACGATCACGCAAGATCTATTT 59.990 40.000 12.06 0.00 41.74 1.40
410 411 4.519350 TCCTACGATCACGCAAGATCTATT 59.481 41.667 12.06 1.83 41.74 1.73
411 412 4.072839 TCCTACGATCACGCAAGATCTAT 58.927 43.478 12.06 4.73 41.74 1.98
412 413 3.473625 TCCTACGATCACGCAAGATCTA 58.526 45.455 12.06 4.90 41.74 1.98
413 414 2.298610 TCCTACGATCACGCAAGATCT 58.701 47.619 12.06 0.00 41.74 2.75
414 415 2.776312 TCCTACGATCACGCAAGATC 57.224 50.000 5.52 5.52 43.96 2.75
415 416 3.735237 AATCCTACGATCACGCAAGAT 57.265 42.857 0.00 0.00 43.96 2.40
416 417 3.520290 AAATCCTACGATCACGCAAGA 57.480 42.857 0.00 0.00 43.96 3.02
417 418 4.600012 AAAAATCCTACGATCACGCAAG 57.400 40.909 0.00 0.00 43.96 4.01
437 438 8.230472 TGTTGGGGAACGTAGTATTTTAAAAA 57.770 30.769 4.44 0.00 45.00 1.94
438 439 7.814264 TGTTGGGGAACGTAGTATTTTAAAA 57.186 32.000 2.51 2.51 45.00 1.52
439 440 7.814264 TTGTTGGGGAACGTAGTATTTTAAA 57.186 32.000 0.00 0.00 45.00 1.52
440 441 7.999450 ATTGTTGGGGAACGTAGTATTTTAA 57.001 32.000 0.00 0.00 45.00 1.52
441 442 7.552330 GGTATTGTTGGGGAACGTAGTATTTTA 59.448 37.037 0.00 0.00 45.00 1.52
442 443 6.375174 GGTATTGTTGGGGAACGTAGTATTTT 59.625 38.462 0.00 0.00 45.00 1.82
443 444 5.882000 GGTATTGTTGGGGAACGTAGTATTT 59.118 40.000 0.00 0.00 45.00 1.40
444 445 5.430886 GGTATTGTTGGGGAACGTAGTATT 58.569 41.667 0.00 0.00 45.00 1.89
445 446 4.141642 GGGTATTGTTGGGGAACGTAGTAT 60.142 45.833 0.00 0.00 45.00 2.12
446 447 3.197549 GGGTATTGTTGGGGAACGTAGTA 59.802 47.826 0.00 0.00 45.00 1.82
448 449 2.635714 GGGTATTGTTGGGGAACGTAG 58.364 52.381 0.00 0.00 0.00 3.51
449 450 1.281577 GGGGTATTGTTGGGGAACGTA 59.718 52.381 0.00 0.00 0.00 3.57
450 451 0.038599 GGGGTATTGTTGGGGAACGT 59.961 55.000 0.00 0.00 0.00 3.99
451 452 1.027792 CGGGGTATTGTTGGGGAACG 61.028 60.000 0.00 0.00 0.00 3.95
452 453 1.317431 GCGGGGTATTGTTGGGGAAC 61.317 60.000 0.00 0.00 0.00 3.62
453 454 1.000646 GCGGGGTATTGTTGGGGAA 60.001 57.895 0.00 0.00 0.00 3.97
454 455 2.678470 GCGGGGTATTGTTGGGGA 59.322 61.111 0.00 0.00 0.00 4.81
455 456 2.441348 GGCGGGGTATTGTTGGGG 60.441 66.667 0.00 0.00 0.00 4.96
456 457 2.441348 GGGCGGGGTATTGTTGGG 60.441 66.667 0.00 0.00 0.00 4.12
457 458 2.049767 GTGGGCGGGGTATTGTTGG 61.050 63.158 0.00 0.00 0.00 3.77
458 459 1.001393 AGTGGGCGGGGTATTGTTG 60.001 57.895 0.00 0.00 0.00 3.33
459 460 1.001393 CAGTGGGCGGGGTATTGTT 60.001 57.895 0.00 0.00 0.00 2.83
460 461 2.674754 CAGTGGGCGGGGTATTGT 59.325 61.111 0.00 0.00 0.00 2.71
461 462 2.124320 CCAGTGGGCGGGGTATTG 60.124 66.667 0.00 0.00 0.00 1.90
462 463 2.285818 TCCAGTGGGCGGGGTATT 60.286 61.111 9.92 0.00 0.00 1.89
463 464 2.768344 CTCCAGTGGGCGGGGTAT 60.768 66.667 9.92 0.00 0.00 2.73
477 478 4.883354 CCATTGGCGGAGGGCTCC 62.883 72.222 0.00 0.00 46.18 4.70
478 479 4.115199 ACCATTGGCGGAGGGCTC 62.115 66.667 1.54 0.00 42.94 4.70
479 480 4.115199 GACCATTGGCGGAGGGCT 62.115 66.667 1.54 0.00 42.94 5.19
481 482 4.856801 CGGACCATTGGCGGAGGG 62.857 72.222 1.54 0.00 0.00 4.30
482 483 2.608970 AATCGGACCATTGGCGGAGG 62.609 60.000 1.54 0.00 0.00 4.30
483 484 0.748005 AAATCGGACCATTGGCGGAG 60.748 55.000 1.54 0.00 0.00 4.63
484 485 0.542333 TAAATCGGACCATTGGCGGA 59.458 50.000 1.54 6.26 0.00 5.54
485 486 0.661020 GTAAATCGGACCATTGGCGG 59.339 55.000 1.54 0.80 0.00 6.13
486 487 0.303493 CGTAAATCGGACCATTGGCG 59.697 55.000 1.54 0.00 35.71 5.69
487 488 1.375551 ACGTAAATCGGACCATTGGC 58.624 50.000 1.54 0.00 44.69 4.52
488 489 3.437395 TCAAACGTAAATCGGACCATTGG 59.563 43.478 0.00 0.00 44.69 3.16
489 490 4.436852 CCTCAAACGTAAATCGGACCATTG 60.437 45.833 0.00 0.00 44.69 2.82
490 491 3.687698 CCTCAAACGTAAATCGGACCATT 59.312 43.478 0.00 0.00 44.69 3.16
491 492 3.267483 CCTCAAACGTAAATCGGACCAT 58.733 45.455 0.00 0.00 44.69 3.55
492 493 2.613474 CCCTCAAACGTAAATCGGACCA 60.613 50.000 0.00 0.00 44.69 4.02
493 494 2.004733 CCCTCAAACGTAAATCGGACC 58.995 52.381 0.00 0.00 44.69 4.46
494 495 2.004733 CCCCTCAAACGTAAATCGGAC 58.995 52.381 0.00 0.00 44.69 4.79
495 496 1.065998 CCCCCTCAAACGTAAATCGGA 60.066 52.381 0.00 0.00 44.69 4.55
496 497 1.339342 ACCCCCTCAAACGTAAATCGG 60.339 52.381 0.00 0.00 44.69 4.18
497 498 2.004733 GACCCCCTCAAACGTAAATCG 58.995 52.381 0.00 0.00 46.00 3.34
498 499 2.004733 CGACCCCCTCAAACGTAAATC 58.995 52.381 0.00 0.00 0.00 2.17
499 500 1.339342 CCGACCCCCTCAAACGTAAAT 60.339 52.381 0.00 0.00 0.00 1.40
500 501 0.035176 CCGACCCCCTCAAACGTAAA 59.965 55.000 0.00 0.00 0.00 2.01
501 502 0.831288 TCCGACCCCCTCAAACGTAA 60.831 55.000 0.00 0.00 0.00 3.18
502 503 0.615544 ATCCGACCCCCTCAAACGTA 60.616 55.000 0.00 0.00 0.00 3.57
503 504 1.486145 AATCCGACCCCCTCAAACGT 61.486 55.000 0.00 0.00 0.00 3.99
504 505 0.322187 AAATCCGACCCCCTCAAACG 60.322 55.000 0.00 0.00 0.00 3.60
505 506 1.173913 CAAATCCGACCCCCTCAAAC 58.826 55.000 0.00 0.00 0.00 2.93
506 507 0.039035 CCAAATCCGACCCCCTCAAA 59.961 55.000 0.00 0.00 0.00 2.69
507 508 1.137594 ACCAAATCCGACCCCCTCAA 61.138 55.000 0.00 0.00 0.00 3.02
508 509 0.252789 TACCAAATCCGACCCCCTCA 60.253 55.000 0.00 0.00 0.00 3.86
509 510 0.468648 CTACCAAATCCGACCCCCTC 59.531 60.000 0.00 0.00 0.00 4.30
510 511 0.043637 TCTACCAAATCCGACCCCCT 59.956 55.000 0.00 0.00 0.00 4.79
511 512 1.137697 ATCTACCAAATCCGACCCCC 58.862 55.000 0.00 0.00 0.00 5.40
512 513 1.814248 GCATCTACCAAATCCGACCCC 60.814 57.143 0.00 0.00 0.00 4.95
513 514 1.141053 AGCATCTACCAAATCCGACCC 59.859 52.381 0.00 0.00 0.00 4.46
514 515 2.484889 GAGCATCTACCAAATCCGACC 58.515 52.381 0.00 0.00 0.00 4.79
528 529 5.822278 TCTACAACGATCACTAAGAGCATC 58.178 41.667 0.00 0.00 31.47 3.91
529 530 5.221145 CCTCTACAACGATCACTAAGAGCAT 60.221 44.000 0.00 0.00 31.47 3.79
530 531 4.096532 CCTCTACAACGATCACTAAGAGCA 59.903 45.833 0.00 0.00 31.47 4.26
531 532 4.498345 CCCTCTACAACGATCACTAAGAGC 60.498 50.000 0.00 0.00 0.00 4.09
532 533 4.036971 CCCCTCTACAACGATCACTAAGAG 59.963 50.000 0.00 0.00 0.00 2.85
533 534 3.952323 CCCCTCTACAACGATCACTAAGA 59.048 47.826 0.00 0.00 0.00 2.10
534 535 3.952323 TCCCCTCTACAACGATCACTAAG 59.048 47.826 0.00 0.00 0.00 2.18
535 536 3.698040 GTCCCCTCTACAACGATCACTAA 59.302 47.826 0.00 0.00 0.00 2.24
536 537 3.285484 GTCCCCTCTACAACGATCACTA 58.715 50.000 0.00 0.00 0.00 2.74
537 538 2.100989 GTCCCCTCTACAACGATCACT 58.899 52.381 0.00 0.00 0.00 3.41
538 539 1.822990 TGTCCCCTCTACAACGATCAC 59.177 52.381 0.00 0.00 0.00 3.06
539 540 2.225382 TGTCCCCTCTACAACGATCA 57.775 50.000 0.00 0.00 0.00 2.92
540 541 4.523173 TCATATGTCCCCTCTACAACGATC 59.477 45.833 1.90 0.00 0.00 3.69
541 542 4.281182 GTCATATGTCCCCTCTACAACGAT 59.719 45.833 1.90 0.00 0.00 3.73
542 543 3.635373 GTCATATGTCCCCTCTACAACGA 59.365 47.826 1.90 0.00 0.00 3.85
543 544 3.383505 TGTCATATGTCCCCTCTACAACG 59.616 47.826 1.90 0.00 0.00 4.10
544 545 5.552870 ATGTCATATGTCCCCTCTACAAC 57.447 43.478 1.90 0.00 0.00 3.32
545 546 7.953493 TGTATATGTCATATGTCCCCTCTACAA 59.047 37.037 14.54 0.00 0.00 2.41
546 547 7.475299 TGTATATGTCATATGTCCCCTCTACA 58.525 38.462 14.54 5.62 0.00 2.74
547 548 7.834681 TCTGTATATGTCATATGTCCCCTCTAC 59.165 40.741 14.54 3.34 0.00 2.59
548 549 7.834681 GTCTGTATATGTCATATGTCCCCTCTA 59.165 40.741 14.54 0.00 0.00 2.43
549 550 6.665680 GTCTGTATATGTCATATGTCCCCTCT 59.334 42.308 14.54 0.00 0.00 3.69
550 551 6.437477 TGTCTGTATATGTCATATGTCCCCTC 59.563 42.308 14.54 2.01 0.00 4.30
551 552 6.322931 TGTCTGTATATGTCATATGTCCCCT 58.677 40.000 14.54 0.00 0.00 4.79
552 553 6.605471 TGTCTGTATATGTCATATGTCCCC 57.395 41.667 14.54 2.30 0.00 4.81
553 554 7.615403 ACATGTCTGTATATGTCATATGTCCC 58.385 38.462 14.54 2.30 32.49 4.46
554 555 9.494271 AAACATGTCTGTATATGTCATATGTCC 57.506 33.333 14.54 4.39 36.52 4.02
556 557 9.196552 CGAAACATGTCTGTATATGTCATATGT 57.803 33.333 14.54 2.27 36.52 2.29
557 558 9.410556 TCGAAACATGTCTGTATATGTCATATG 57.589 33.333 14.54 0.00 36.52 1.78
558 559 9.631452 CTCGAAACATGTCTGTATATGTCATAT 57.369 33.333 10.20 10.20 36.52 1.78
559 560 8.630037 ACTCGAAACATGTCTGTATATGTCATA 58.370 33.333 0.00 0.00 36.52 2.15
560 561 7.492524 ACTCGAAACATGTCTGTATATGTCAT 58.507 34.615 0.00 0.00 36.52 3.06
561 562 6.863275 ACTCGAAACATGTCTGTATATGTCA 58.137 36.000 0.00 0.00 36.52 3.58
562 563 6.972901 TGACTCGAAACATGTCTGTATATGTC 59.027 38.462 0.00 1.98 36.52 3.06
563 564 6.863275 TGACTCGAAACATGTCTGTATATGT 58.137 36.000 0.00 0.00 38.92 2.29
564 565 7.936950 ATGACTCGAAACATGTCTGTATATG 57.063 36.000 0.00 0.00 33.36 1.78
582 583 2.100410 TCGACTGCGCGATGACTC 59.900 61.111 12.10 0.00 35.01 3.36
583 584 2.202492 GTCGACTGCGCGATGACT 60.202 61.111 12.10 0.00 42.82 3.41
586 587 3.598562 GTCGTCGACTGCGCGATG 61.599 66.667 18.09 3.22 45.91 3.84
587 588 4.831307 GGTCGTCGACTGCGCGAT 62.831 66.667 23.69 0.00 43.61 4.58
591 592 3.834447 TTGTGGGTCGTCGACTGCG 62.834 63.158 23.69 0.00 39.35 5.18
592 593 0.949105 AATTGTGGGTCGTCGACTGC 60.949 55.000 23.69 14.40 32.47 4.40
593 594 1.194547 CAAATTGTGGGTCGTCGACTG 59.805 52.381 23.69 8.73 32.47 3.51
594 595 1.508632 CAAATTGTGGGTCGTCGACT 58.491 50.000 23.69 0.91 32.47 4.18
595 596 0.110373 GCAAATTGTGGGTCGTCGAC 60.110 55.000 17.16 17.16 0.00 4.20
596 597 0.533085 TGCAAATTGTGGGTCGTCGA 60.533 50.000 0.00 0.00 0.00 4.20
597 598 0.521291 ATGCAAATTGTGGGTCGTCG 59.479 50.000 0.00 0.00 0.00 5.12
598 599 1.981254 CATGCAAATTGTGGGTCGTC 58.019 50.000 0.00 0.00 0.00 4.20
599 600 0.038343 GCATGCAAATTGTGGGTCGT 60.038 50.000 14.21 0.00 0.00 4.34
600 601 0.737019 GGCATGCAAATTGTGGGTCG 60.737 55.000 21.36 0.00 0.00 4.79
601 602 0.321021 TGGCATGCAAATTGTGGGTC 59.679 50.000 21.36 0.00 0.00 4.46
602 603 0.035176 GTGGCATGCAAATTGTGGGT 59.965 50.000 21.36 0.00 0.00 4.51
603 604 0.322322 AGTGGCATGCAAATTGTGGG 59.678 50.000 21.36 0.00 0.00 4.61
604 605 1.434555 CAGTGGCATGCAAATTGTGG 58.565 50.000 21.36 0.00 0.00 4.17
605 606 0.793861 GCAGTGGCATGCAAATTGTG 59.206 50.000 21.36 8.53 45.77 3.33
606 607 3.220447 GCAGTGGCATGCAAATTGT 57.780 47.368 21.36 0.00 45.77 2.71
613 614 3.652539 ATTTGCGGCAGTGGCATGC 62.653 57.895 17.80 9.90 45.74 4.06
614 615 1.517694 GATTTGCGGCAGTGGCATG 60.518 57.895 17.80 2.15 43.71 4.06
615 616 2.713967 GGATTTGCGGCAGTGGCAT 61.714 57.895 17.80 1.92 43.71 4.40
616 617 3.372730 GGATTTGCGGCAGTGGCA 61.373 61.111 17.80 3.53 43.71 4.92
617 618 4.133796 GGGATTTGCGGCAGTGGC 62.134 66.667 6.62 6.62 40.13 5.01
618 619 1.937546 GAAGGGATTTGCGGCAGTGG 61.938 60.000 1.67 0.00 0.00 4.00
619 620 1.508088 GAAGGGATTTGCGGCAGTG 59.492 57.895 1.67 0.00 0.00 3.66
620 621 1.678970 GGAAGGGATTTGCGGCAGT 60.679 57.895 1.67 0.00 0.00 4.40
621 622 1.039233 ATGGAAGGGATTTGCGGCAG 61.039 55.000 1.67 0.00 0.00 4.85
622 623 0.257328 TATGGAAGGGATTTGCGGCA 59.743 50.000 0.00 0.00 0.00 5.69
623 624 1.270550 CATATGGAAGGGATTTGCGGC 59.729 52.381 0.00 0.00 0.00 6.53
624 625 2.554032 GTCATATGGAAGGGATTTGCGG 59.446 50.000 2.13 0.00 0.00 5.69
625 626 3.213506 TGTCATATGGAAGGGATTTGCG 58.786 45.455 2.13 0.00 0.00 4.85
626 627 5.796424 ATTGTCATATGGAAGGGATTTGC 57.204 39.130 2.13 0.00 0.00 3.68
627 628 8.680903 GCTATATTGTCATATGGAAGGGATTTG 58.319 37.037 2.13 0.00 0.00 2.32
628 629 7.836183 GGCTATATTGTCATATGGAAGGGATTT 59.164 37.037 2.13 0.00 0.00 2.17
629 630 7.349598 GGCTATATTGTCATATGGAAGGGATT 58.650 38.462 2.13 0.00 0.00 3.01
630 631 6.408548 CGGCTATATTGTCATATGGAAGGGAT 60.409 42.308 2.13 0.00 0.00 3.85
631 632 5.104941 CGGCTATATTGTCATATGGAAGGGA 60.105 44.000 2.13 0.00 0.00 4.20
632 633 5.118990 CGGCTATATTGTCATATGGAAGGG 58.881 45.833 2.13 0.00 0.00 3.95
633 634 5.118990 CCGGCTATATTGTCATATGGAAGG 58.881 45.833 2.13 0.00 0.00 3.46
634 635 4.572389 GCCGGCTATATTGTCATATGGAAG 59.428 45.833 22.15 0.00 0.00 3.46
635 636 4.019771 TGCCGGCTATATTGTCATATGGAA 60.020 41.667 29.70 0.00 0.00 3.53
636 637 3.517500 TGCCGGCTATATTGTCATATGGA 59.482 43.478 29.70 0.00 0.00 3.41
637 638 3.872696 TGCCGGCTATATTGTCATATGG 58.127 45.455 29.70 0.00 0.00 2.74
638 639 3.310774 GCTGCCGGCTATATTGTCATATG 59.689 47.826 29.70 0.00 38.06 1.78
639 640 3.535561 GCTGCCGGCTATATTGTCATAT 58.464 45.455 29.70 0.00 38.06 1.78
640 641 2.354704 GGCTGCCGGCTATATTGTCATA 60.355 50.000 29.70 0.41 41.46 2.15
641 642 1.611673 GGCTGCCGGCTATATTGTCAT 60.612 52.381 29.70 0.00 41.46 3.06
655 656 1.537202 CTCATAATTTAGCCGGCTGCC 59.463 52.381 38.98 9.11 42.71 4.85
697 698 4.074970 CACAGGGTATCAAATATGGGAGC 58.925 47.826 0.00 0.00 0.00 4.70
716 717 0.252696 ATGGCACTCCTCCTACCACA 60.253 55.000 0.00 0.00 32.13 4.17
723 724 1.448540 CACGTGATGGCACTCCTCC 60.449 63.158 10.90 0.00 42.93 4.30
872 4844 1.491563 CCTTTGTTCGGAAGACGCG 59.508 57.895 3.53 3.53 43.86 6.01
1061 5051 1.339151 GGTTGTCAAGGATCCGCTTCT 60.339 52.381 5.98 0.00 0.00 2.85
1074 5064 0.249868 CGAGGTGCTTGAGGTTGTCA 60.250 55.000 0.00 0.00 0.00 3.58
1108 5098 2.903547 CGCTGGGTGTTTTCCGTGG 61.904 63.158 0.00 0.00 0.00 4.94
1146 5136 2.158827 GGAGAGAAGGAAGGAGATTGGC 60.159 54.545 0.00 0.00 0.00 4.52
1153 5143 2.552367 GAAAGGGGAGAGAAGGAAGGA 58.448 52.381 0.00 0.00 0.00 3.36
1174 5164 2.355615 GCTTCTGGAAAAGGGAGGAGAG 60.356 54.545 0.00 0.00 0.00 3.20
1178 5168 1.352352 TCTGCTTCTGGAAAAGGGAGG 59.648 52.381 0.00 0.00 0.00 4.30
1179 5169 2.867109 TCTGCTTCTGGAAAAGGGAG 57.133 50.000 0.00 0.00 0.00 4.30
1180 5170 2.881403 GCATCTGCTTCTGGAAAAGGGA 60.881 50.000 0.00 0.00 38.21 4.20
1181 5171 1.475682 GCATCTGCTTCTGGAAAAGGG 59.524 52.381 0.00 0.00 38.21 3.95
1182 5172 1.131883 CGCATCTGCTTCTGGAAAAGG 59.868 52.381 0.09 0.00 39.32 3.11
1183 5173 1.467035 GCGCATCTGCTTCTGGAAAAG 60.467 52.381 0.30 0.00 39.32 2.27
1184 5174 0.523072 GCGCATCTGCTTCTGGAAAA 59.477 50.000 0.30 0.00 39.32 2.29
1185 5175 1.638388 CGCGCATCTGCTTCTGGAAA 61.638 55.000 8.75 0.00 39.32 3.13
1186 5176 2.102438 CGCGCATCTGCTTCTGGAA 61.102 57.895 8.75 0.00 39.32 3.53
1187 5177 2.505635 TTCGCGCATCTGCTTCTGGA 62.506 55.000 8.75 0.00 39.32 3.86
1188 5178 1.638388 TTTCGCGCATCTGCTTCTGG 61.638 55.000 8.75 0.00 39.32 3.86
1189 5179 0.247576 CTTTCGCGCATCTGCTTCTG 60.248 55.000 8.75 0.00 39.32 3.02
1190 5180 0.390340 TCTTTCGCGCATCTGCTTCT 60.390 50.000 8.75 0.00 39.32 2.85
1191 5181 0.654683 ATCTTTCGCGCATCTGCTTC 59.345 50.000 8.75 0.00 39.32 3.86
1192 5182 0.376152 CATCTTTCGCGCATCTGCTT 59.624 50.000 8.75 0.00 39.32 3.91
1225 5215 0.752658 CAGATCGGCAGTGGGTATCA 59.247 55.000 0.00 0.00 0.00 2.15
1242 5232 1.800655 CGGCGAAGAATCCAGAGACAG 60.801 57.143 0.00 0.00 0.00 3.51
1283 5286 7.482654 GCAAGAGGCAAAGAAATTAGTTTTT 57.517 32.000 0.00 0.00 43.97 1.94
1314 5317 0.540365 ATATGCCCAAATCCTGCGGG 60.540 55.000 4.71 4.71 43.42 6.13
1375 5380 4.799473 CGATGCGCGCACCTTGTG 62.799 66.667 39.05 18.15 36.51 3.33
1435 5440 2.281761 CGCACAGGTTGAAGCCCT 60.282 61.111 0.00 0.00 0.00 5.19
1453 5458 0.953471 TCGAATCAACCCACGGCAAG 60.953 55.000 0.00 0.00 0.00 4.01
1481 5486 2.357009 CCGAGGGATCTGCAAAATCAAG 59.643 50.000 10.10 0.47 0.00 3.02
1598 5603 0.727398 CGGCTTAAAAAGAGCGAGGG 59.273 55.000 0.00 0.00 41.03 4.30
1714 5834 8.261492 AGCAGAACAACAATATCTAACTTCAG 57.739 34.615 0.00 0.00 0.00 3.02
1745 5865 3.641437 TTGCACTTTTGACCTACATGC 57.359 42.857 0.00 0.00 33.15 4.06
1747 5867 6.815089 TCAAATTTGCACTTTTGACCTACAT 58.185 32.000 13.54 0.00 37.03 2.29
1939 6062 6.989155 ATATCCCCGTTCAAACAGAGTATA 57.011 37.500 0.00 0.00 0.00 1.47
1985 6108 3.360533 CGCATCAGATTGCAAGAATGAC 58.639 45.455 4.94 0.00 42.91 3.06
2010 6133 3.788142 AGATCATGTACAAACCCCATCCT 59.212 43.478 0.00 0.00 0.00 3.24
2029 6160 2.355108 CCCCAAATGATCGCCGATAGAT 60.355 50.000 0.00 0.00 39.76 1.98
2061 6192 0.742990 TAGCAGGCACATTACGGCAC 60.743 55.000 0.00 0.00 0.00 5.01
2068 6199 0.960364 CCCGTGTTAGCAGGCACATT 60.960 55.000 0.00 0.00 35.51 2.71
2087 6219 8.830580 ACTTCATGTAGCACACATATTTCATAC 58.169 33.333 0.00 0.00 46.47 2.39
2106 6238 8.539770 ACAGAACAACACTATCTAACTTCATG 57.460 34.615 0.00 0.00 0.00 3.07
2148 6347 7.231467 AGGCACTAAGGAACAATTTTCTAGAA 58.769 34.615 0.00 0.00 36.02 2.10
2153 6352 6.084326 TCAAGGCACTAAGGAACAATTTTC 57.916 37.500 0.00 0.00 38.49 2.29
2176 6375 7.643123 AGACAAAACTACATCTGGGGATAAAT 58.357 34.615 0.00 0.00 0.00 1.40
2180 6379 5.014123 TGAAGACAAAACTACATCTGGGGAT 59.986 40.000 0.00 0.00 0.00 3.85
2245 6444 4.486090 ACAGTCTAGTGTCAACATTAGCG 58.514 43.478 7.58 2.88 36.49 4.26
2424 6623 1.485066 GGTGTATCCCCTACCACTGTG 59.515 57.143 0.00 0.00 34.61 3.66
2428 6627 1.405272 CCCGGTGTATCCCCTACCAC 61.405 65.000 0.00 0.00 34.10 4.16
2648 6847 2.887783 TGTAAAGGAAAATTCGCAGCCA 59.112 40.909 0.00 0.00 0.00 4.75
2651 6850 4.917415 CCTTGTGTAAAGGAAAATTCGCAG 59.083 41.667 0.00 0.00 39.81 5.18
2823 7022 2.092968 TGAATCCCCATCTTCCAAGTCG 60.093 50.000 0.00 0.00 0.00 4.18
2980 7179 0.881796 CCCGCAAGAAAAAGACCTCC 59.118 55.000 0.00 0.00 43.02 4.30
2981 7180 0.881796 CCCCGCAAGAAAAAGACCTC 59.118 55.000 0.00 0.00 43.02 3.85
2982 7181 0.476771 TCCCCGCAAGAAAAAGACCT 59.523 50.000 0.00 0.00 43.02 3.85
2997 7199 1.054978 AGCTCCTTAATCCGGTCCCC 61.055 60.000 0.00 0.00 0.00 4.81
3063 7265 4.495422 TGCACTCTCTCGAAGGTAATTTC 58.505 43.478 0.00 0.00 0.00 2.17
3089 7291 7.873719 TCCCCTGTTTGTGTTATATACATTG 57.126 36.000 0.00 0.00 39.39 2.82
3126 7332 3.185455 AGGAGGGAAGAACATAGCAGTT 58.815 45.455 0.00 0.00 0.00 3.16
3154 7360 2.761786 ATATGAGGTGGCCTTGCATT 57.238 45.000 3.32 0.00 31.76 3.56
3244 7457 6.037062 CCATTTGGAACTTTTTCAAAGGTGAC 59.963 38.462 4.20 0.00 37.39 3.67
3325 7539 7.175119 TCGATGATAGTCATACTTTGGGTCTAG 59.825 40.741 0.00 0.00 37.20 2.43
3359 7614 2.352342 TGAGTATGCATGCAACACGATG 59.648 45.455 26.68 0.00 0.00 3.84
3394 7649 5.948992 AAGAACAAATTGCTAGACCTGAC 57.051 39.130 0.00 0.00 0.00 3.51
3431 7686 7.502561 GGCTATAGATGTAGAACCCAAAAATGT 59.497 37.037 3.21 0.00 0.00 2.71
3540 7796 3.979101 TCACTGTCCACATCAGCATTA 57.021 42.857 0.00 0.00 36.50 1.90
3832 8137 9.188588 CAATATGCTGATAATTGGCTAAAAGTG 57.811 33.333 0.00 0.00 0.00 3.16
3883 8188 5.105473 TGCTAGATTACTGGTACCAGAACAC 60.105 44.000 41.87 28.39 46.30 3.32
3959 8264 4.826733 ACACATAAGCATGGTGAGAAACAA 59.173 37.500 0.00 0.00 36.39 2.83
4035 8340 4.125703 CTCTCTTATGCTGGACATTCCAC 58.874 47.826 0.00 0.00 42.67 4.02
4054 8359 3.514706 AGTGACATGAGCAGTGATTCTCT 59.485 43.478 0.00 0.00 0.00 3.10
4060 8365 1.413812 ACACAGTGACATGAGCAGTGA 59.586 47.619 24.56 0.00 38.64 3.41
4064 8369 2.102252 TGTACACACAGTGACATGAGCA 59.898 45.455 7.81 0.00 36.96 4.26
4080 8385 9.679661 TCCATAATTTTAGAAGCTTCATGTACA 57.320 29.630 27.57 0.00 0.00 2.90
4099 8404 4.199310 ACATAGCTTGTGCGTTCCATAAT 58.801 39.130 0.00 0.00 45.42 1.28
4102 8407 2.113860 ACATAGCTTGTGCGTTCCAT 57.886 45.000 0.00 0.00 45.42 3.41
4108 8413 6.202762 TGAGGAATATTAACATAGCTTGTGCG 59.797 38.462 0.00 0.00 45.42 5.34
4111 8416 7.443575 CAGCTGAGGAATATTAACATAGCTTGT 59.556 37.037 8.42 0.00 41.53 3.16
4122 8427 7.712639 GTGAATGAGAACAGCTGAGGAATATTA 59.287 37.037 23.35 0.00 0.00 0.98
4137 8442 9.424319 TGTAAACTAGAGAATGTGAATGAGAAC 57.576 33.333 0.00 0.00 0.00 3.01
4196 8501 5.107298 GCTTAGCATACTCGGATCATTTGTC 60.107 44.000 0.00 0.00 0.00 3.18
4202 8507 2.316108 TGGCTTAGCATACTCGGATCA 58.684 47.619 6.53 0.00 0.00 2.92
4211 8516 5.712446 TGTTTTGTACCATTGGCTTAGCATA 59.288 36.000 6.53 0.00 0.00 3.14
4212 8517 4.526262 TGTTTTGTACCATTGGCTTAGCAT 59.474 37.500 6.53 0.00 0.00 3.79
4214 8519 4.513198 TGTTTTGTACCATTGGCTTAGC 57.487 40.909 1.54 0.00 0.00 3.09
4215 8520 5.331902 CGATGTTTTGTACCATTGGCTTAG 58.668 41.667 1.54 0.00 0.00 2.18
4216 8521 4.380023 GCGATGTTTTGTACCATTGGCTTA 60.380 41.667 1.54 0.00 0.00 3.09
4220 8525 2.230025 TGGCGATGTTTTGTACCATTGG 59.770 45.455 0.00 0.00 0.00 3.16
4225 8530 3.569250 AATGTGGCGATGTTTTGTACC 57.431 42.857 0.00 0.00 0.00 3.34
4238 8543 9.301153 CATAGGATTTTAACTTGTAAATGTGGC 57.699 33.333 0.00 0.00 0.00 5.01
4334 8640 6.730344 GGGACTTCCTTTGTCACACAGACA 62.730 50.000 0.00 0.00 44.98 3.41
4379 8685 3.961408 ACTCGGGTGATATGAGTAAAGCT 59.039 43.478 0.00 0.00 40.98 3.74
4381 8687 4.556898 CGGACTCGGGTGATATGAGTAAAG 60.557 50.000 0.00 0.00 42.71 1.85
4397 8703 1.018226 AGACTACGGACACGGACTCG 61.018 60.000 0.00 0.00 46.48 4.18
4497 8803 2.415608 GCCAGGATGAGACCGACGA 61.416 63.158 0.00 0.00 39.69 4.20
4592 8898 4.556699 GCGTACCAATCAGGCAATATTTCC 60.557 45.833 0.00 0.00 43.14 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.