Multiple sequence alignment - TraesCS1D01G301900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G301900 chr1D 100.000 5312 0 0 1 5312 399819711 399825022 0.000000e+00 9810.0
1 TraesCS1D01G301900 chr1D 95.238 42 1 1 509 550 399820179 399820219 1.230000e-06 65.8
2 TraesCS1D01G301900 chr1D 95.238 42 1 1 469 509 399820219 399820260 1.230000e-06 65.8
3 TraesCS1D01G301900 chr1B 93.274 2602 108 31 2744 5307 536603602 536606174 0.000000e+00 3773.0
4 TraesCS1D01G301900 chr1B 87.978 2171 155 50 509 2613 536601417 536603547 0.000000e+00 2466.0
5 TraesCS1D01G301900 chr1A 95.918 980 37 3 2744 3722 496295285 496296262 0.000000e+00 1585.0
6 TraesCS1D01G301900 chr1A 89.007 1128 71 15 1536 2613 496294107 496295231 0.000000e+00 1347.0
7 TraesCS1D01G301900 chr1A 87.670 884 60 20 3879 4748 496296376 496297224 0.000000e+00 983.0
8 TraesCS1D01G301900 chr1A 88.859 736 52 17 778 1485 496293358 496294091 0.000000e+00 878.0
9 TraesCS1D01G301900 chr1A 89.597 471 28 9 4845 5307 496297371 496297828 3.570000e-161 579.0
10 TraesCS1D01G301900 chr1A 95.973 149 5 1 2608 2755 294218535 294218387 1.910000e-59 241.0
11 TraesCS1D01G301900 chr6D 98.582 141 2 0 2606 2746 85800138 85799998 3.180000e-62 250.0
12 TraesCS1D01G301900 chr7A 98.571 140 2 0 2606 2745 254417768 254417629 1.140000e-61 248.0
13 TraesCS1D01G301900 chr7A 83.516 91 10 2 21 111 513573797 513573882 4.410000e-11 80.5
14 TraesCS1D01G301900 chr5A 98.571 140 2 0 2606 2745 366234957 366234818 1.140000e-61 248.0
15 TraesCS1D01G301900 chr4A 98.571 140 2 0 2606 2745 362105818 362105679 1.140000e-61 248.0
16 TraesCS1D01G301900 chr3A 98.571 140 2 0 2606 2745 308688678 308688539 1.140000e-61 248.0
17 TraesCS1D01G301900 chr2B 93.373 166 6 5 2606 2770 464437817 464437978 1.910000e-59 241.0
18 TraesCS1D01G301900 chr2B 82.979 94 11 4 21 111 733151179 733151088 4.410000e-11 80.5
19 TraesCS1D01G301900 chr2D 97.826 138 3 0 2608 2745 112595599 112595736 6.880000e-59 239.0
20 TraesCS1D01G301900 chr2D 84.314 102 12 4 15 115 247819714 247819812 4.380000e-16 97.1
21 TraesCS1D01G301900 chr2D 84.043 94 10 4 21 112 307490171 307490081 9.480000e-13 86.1
22 TraesCS1D01G301900 chr5B 92.638 163 7 3 2608 2769 486071070 486070912 4.140000e-56 230.0
23 TraesCS1D01G301900 chr4B 85.870 92 10 3 19 107 379084888 379084979 1.570000e-15 95.3
24 TraesCS1D01G301900 chr3D 82.828 99 13 4 18 114 429306331 429306235 9.480000e-13 86.1
25 TraesCS1D01G301900 chr3D 82.979 94 10 5 21 111 426041385 426041295 4.410000e-11 80.5
26 TraesCS1D01G301900 chr6A 79.675 123 10 9 19 129 325903603 325903484 2.050000e-09 75.0
27 TraesCS1D01G301900 chr4D 80.808 99 15 3 21 117 54683347 54683251 2.050000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G301900 chr1D 399819711 399825022 5311 False 9810.0 9810 100.0000 1 5312 1 chr1D.!!$F1 5311
1 TraesCS1D01G301900 chr1B 536601417 536606174 4757 False 3119.5 3773 90.6260 509 5307 2 chr1B.!!$F1 4798
2 TraesCS1D01G301900 chr1A 496293358 496297828 4470 False 1074.4 1585 90.2102 778 5307 5 chr1A.!!$F1 4529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
108 109 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.0 0.00 0.0 0.0 2.73 F
1605 1670 0.395036 TGTACCCATCCCCAAATGCG 60.395 55.0 0.00 0.0 0.0 4.73 F
2496 2620 0.041090 AAACCCTATGCCCCTGTTGG 59.959 55.0 0.00 0.0 0.0 3.77 F
2682 2806 0.104120 TGGTCGCGACATCTTATGGG 59.896 55.0 37.26 0.0 33.6 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1770 1847 0.179156 CATGACGAACAATGGCCTGC 60.179 55.0 3.32 0.00 0.00 4.85 R
2663 2787 0.104120 CCCATAAGATGTCGCGACCA 59.896 55.0 34.34 22.80 0.00 4.02 R
4208 4345 0.387929 TCGTATCAAGCCATCGACCC 59.612 55.0 0.00 0.00 0.00 4.46 R
4526 4679 0.664761 GGATGACGATGGCCAACATG 59.335 55.0 10.96 1.85 40.72 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.719426 ACGAAGTTGTACTCCTTCCG 57.281 50.000 15.14 13.08 37.78 4.30
31 32 1.959282 ACGAAGTTGTACTCCTTCCGT 59.041 47.619 15.14 13.50 37.78 4.69
32 33 2.030451 ACGAAGTTGTACTCCTTCCGTC 60.030 50.000 15.14 0.00 37.78 4.79
33 34 2.670509 CGAAGTTGTACTCCTTCCGTCC 60.671 54.545 15.14 0.00 34.85 4.79
34 35 1.264295 AGTTGTACTCCTTCCGTCCC 58.736 55.000 0.00 0.00 0.00 4.46
35 36 0.971386 GTTGTACTCCTTCCGTCCCA 59.029 55.000 0.00 0.00 0.00 4.37
36 37 1.345415 GTTGTACTCCTTCCGTCCCAA 59.655 52.381 0.00 0.00 0.00 4.12
37 38 1.719529 TGTACTCCTTCCGTCCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
38 39 2.048601 TGTACTCCTTCCGTCCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
39 40 2.640826 TGTACTCCTTCCGTCCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
40 41 3.839490 TGTACTCCTTCCGTCCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
41 42 4.286549 TGTACTCCTTCCGTCCCAAAATAA 59.713 41.667 0.00 0.00 0.00 1.40
42 43 3.682696 ACTCCTTCCGTCCCAAAATAAC 58.317 45.455 0.00 0.00 0.00 1.89
43 44 3.329814 ACTCCTTCCGTCCCAAAATAACT 59.670 43.478 0.00 0.00 0.00 2.24
44 45 4.533311 ACTCCTTCCGTCCCAAAATAACTA 59.467 41.667 0.00 0.00 0.00 2.24
45 46 5.191124 ACTCCTTCCGTCCCAAAATAACTAT 59.809 40.000 0.00 0.00 0.00 2.12
46 47 6.069705 TCCTTCCGTCCCAAAATAACTATT 57.930 37.500 0.00 0.00 0.00 1.73
47 48 6.486941 TCCTTCCGTCCCAAAATAACTATTT 58.513 36.000 0.00 0.00 37.49 1.40
48 49 6.949463 TCCTTCCGTCCCAAAATAACTATTTT 59.051 34.615 2.27 2.27 44.27 1.82
49 50 8.108364 TCCTTCCGTCCCAAAATAACTATTTTA 58.892 33.333 7.03 0.00 42.26 1.52
50 51 8.741841 CCTTCCGTCCCAAAATAACTATTTTAA 58.258 33.333 7.03 0.00 42.26 1.52
51 52 9.783256 CTTCCGTCCCAAAATAACTATTTTAAG 57.217 33.333 7.03 3.32 42.26 1.85
52 53 7.764331 TCCGTCCCAAAATAACTATTTTAAGC 58.236 34.615 7.03 0.00 42.26 3.09
53 54 7.612633 TCCGTCCCAAAATAACTATTTTAAGCT 59.387 33.333 7.03 0.00 42.26 3.74
54 55 8.248253 CCGTCCCAAAATAACTATTTTAAGCTT 58.752 33.333 3.48 3.48 42.26 3.74
97 98 7.611213 AAGTTGAGATACTTATTTTGGGACG 57.389 36.000 0.00 0.00 36.62 4.79
98 99 6.113411 AGTTGAGATACTTATTTTGGGACGG 58.887 40.000 0.00 0.00 0.00 4.79
99 100 5.943349 TGAGATACTTATTTTGGGACGGA 57.057 39.130 0.00 0.00 0.00 4.69
100 101 5.914033 TGAGATACTTATTTTGGGACGGAG 58.086 41.667 0.00 0.00 0.00 4.63
101 102 5.163343 TGAGATACTTATTTTGGGACGGAGG 60.163 44.000 0.00 0.00 0.00 4.30
102 103 2.801077 ACTTATTTTGGGACGGAGGG 57.199 50.000 0.00 0.00 0.00 4.30
103 104 2.271777 ACTTATTTTGGGACGGAGGGA 58.728 47.619 0.00 0.00 0.00 4.20
104 105 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
105 106 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
106 107 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
107 108 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
108 109 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
109 110 1.002069 TTGGGACGGAGGGAGTACTA 58.998 55.000 0.00 0.00 0.00 1.82
110 111 1.002069 TGGGACGGAGGGAGTACTAA 58.998 55.000 0.00 0.00 0.00 2.24
111 112 1.358787 TGGGACGGAGGGAGTACTAAA 59.641 52.381 0.00 0.00 0.00 1.85
112 113 2.023695 TGGGACGGAGGGAGTACTAAAT 60.024 50.000 0.00 0.00 0.00 1.40
113 114 3.036819 GGGACGGAGGGAGTACTAAATT 58.963 50.000 0.00 0.00 0.00 1.82
114 115 4.218312 GGGACGGAGGGAGTACTAAATTA 58.782 47.826 0.00 0.00 0.00 1.40
115 116 4.280425 GGGACGGAGGGAGTACTAAATTAG 59.720 50.000 0.00 0.00 0.00 1.73
116 117 4.261952 GGACGGAGGGAGTACTAAATTAGC 60.262 50.000 0.00 0.00 0.00 3.09
117 118 3.317430 ACGGAGGGAGTACTAAATTAGCG 59.683 47.826 0.00 0.00 0.00 4.26
118 119 3.567164 CGGAGGGAGTACTAAATTAGCGA 59.433 47.826 0.00 0.00 0.00 4.93
119 120 4.556302 CGGAGGGAGTACTAAATTAGCGAC 60.556 50.000 0.00 0.00 0.00 5.19
120 121 4.340381 GGAGGGAGTACTAAATTAGCGACA 59.660 45.833 0.00 0.00 0.00 4.35
121 122 5.507650 GGAGGGAGTACTAAATTAGCGACAG 60.508 48.000 0.00 0.00 0.00 3.51
122 123 4.954826 AGGGAGTACTAAATTAGCGACAGT 59.045 41.667 0.00 0.00 0.00 3.55
123 124 5.421374 AGGGAGTACTAAATTAGCGACAGTT 59.579 40.000 0.00 0.00 0.00 3.16
124 125 6.604795 AGGGAGTACTAAATTAGCGACAGTTA 59.395 38.462 0.00 0.00 0.00 2.24
125 126 6.916932 GGGAGTACTAAATTAGCGACAGTTAG 59.083 42.308 0.00 0.00 0.00 2.34
126 127 7.416101 GGGAGTACTAAATTAGCGACAGTTAGT 60.416 40.741 0.00 9.56 38.30 2.24
127 128 8.616076 GGAGTACTAAATTAGCGACAGTTAGTA 58.384 37.037 0.00 8.10 36.61 1.82
129 130 9.947669 AGTACTAAATTAGCGACAGTTAGTATG 57.052 33.333 12.75 0.00 38.70 2.39
130 131 9.178427 GTACTAAATTAGCGACAGTTAGTATGG 57.822 37.037 12.75 0.00 38.70 2.74
131 132 8.004087 ACTAAATTAGCGACAGTTAGTATGGA 57.996 34.615 0.00 0.00 34.16 3.41
132 133 8.639761 ACTAAATTAGCGACAGTTAGTATGGAT 58.360 33.333 0.00 0.00 34.16 3.41
133 134 7.715265 AAATTAGCGACAGTTAGTATGGATG 57.285 36.000 0.00 0.00 0.00 3.51
134 135 3.735237 AGCGACAGTTAGTATGGATGG 57.265 47.619 0.00 0.00 0.00 3.51
135 136 3.296854 AGCGACAGTTAGTATGGATGGA 58.703 45.455 0.00 0.00 0.00 3.41
136 137 3.898123 AGCGACAGTTAGTATGGATGGAT 59.102 43.478 0.00 0.00 0.00 3.41
137 138 4.345257 AGCGACAGTTAGTATGGATGGATT 59.655 41.667 0.00 0.00 0.00 3.01
138 139 5.538813 AGCGACAGTTAGTATGGATGGATTA 59.461 40.000 0.00 0.00 0.00 1.75
139 140 5.864474 GCGACAGTTAGTATGGATGGATTAG 59.136 44.000 0.00 0.00 0.00 1.73
140 141 6.390721 CGACAGTTAGTATGGATGGATTAGG 58.609 44.000 0.00 0.00 0.00 2.69
141 142 6.572509 CGACAGTTAGTATGGATGGATTAGGG 60.573 46.154 0.00 0.00 0.00 3.53
142 143 5.548056 ACAGTTAGTATGGATGGATTAGGGG 59.452 44.000 0.00 0.00 0.00 4.79
143 144 5.045578 CAGTTAGTATGGATGGATTAGGGGG 60.046 48.000 0.00 0.00 0.00 5.40
144 145 3.963525 AGTATGGATGGATTAGGGGGA 57.036 47.619 0.00 0.00 0.00 4.81
145 146 4.243125 AGTATGGATGGATTAGGGGGAA 57.757 45.455 0.00 0.00 0.00 3.97
146 147 4.791000 AGTATGGATGGATTAGGGGGAAT 58.209 43.478 0.00 0.00 0.00 3.01
147 148 5.939437 AGTATGGATGGATTAGGGGGAATA 58.061 41.667 0.00 0.00 0.00 1.75
148 149 6.534313 AGTATGGATGGATTAGGGGGAATAT 58.466 40.000 0.00 0.00 0.00 1.28
149 150 6.980309 AGTATGGATGGATTAGGGGGAATATT 59.020 38.462 0.00 0.00 0.00 1.28
150 151 6.758085 ATGGATGGATTAGGGGGAATATTT 57.242 37.500 0.00 0.00 0.00 1.40
151 152 6.559741 TGGATGGATTAGGGGGAATATTTT 57.440 37.500 0.00 0.00 0.00 1.82
152 153 6.322126 TGGATGGATTAGGGGGAATATTTTG 58.678 40.000 0.00 0.00 0.00 2.44
153 154 6.125621 TGGATGGATTAGGGGGAATATTTTGT 60.126 38.462 0.00 0.00 0.00 2.83
154 155 6.787458 GGATGGATTAGGGGGAATATTTTGTT 59.213 38.462 0.00 0.00 0.00 2.83
155 156 7.953493 GGATGGATTAGGGGGAATATTTTGTTA 59.047 37.037 0.00 0.00 0.00 2.41
156 157 9.547279 GATGGATTAGGGGGAATATTTTGTTAT 57.453 33.333 0.00 0.00 0.00 1.89
157 158 9.912461 ATGGATTAGGGGGAATATTTTGTTATT 57.088 29.630 0.00 0.00 0.00 1.40
186 187 8.953368 ATTCTGCTTCTCATTTTCTTTGTTTT 57.047 26.923 0.00 0.00 0.00 2.43
187 188 7.760131 TCTGCTTCTCATTTTCTTTGTTTTG 57.240 32.000 0.00 0.00 0.00 2.44
188 189 7.546358 TCTGCTTCTCATTTTCTTTGTTTTGA 58.454 30.769 0.00 0.00 0.00 2.69
189 190 8.034215 TCTGCTTCTCATTTTCTTTGTTTTGAA 58.966 29.630 0.00 0.00 0.00 2.69
190 191 8.545229 TGCTTCTCATTTTCTTTGTTTTGAAA 57.455 26.923 0.00 0.00 0.00 2.69
191 192 8.997323 TGCTTCTCATTTTCTTTGTTTTGAAAA 58.003 25.926 0.00 0.00 43.40 2.29
234 235 9.872721 AAATTGGTTGAAATTTTGAAAATTGCT 57.127 22.222 19.17 5.31 36.56 3.91
235 236 9.518906 AATTGGTTGAAATTTTGAAAATTGCTC 57.481 25.926 19.17 13.26 0.00 4.26
236 237 7.621428 TGGTTGAAATTTTGAAAATTGCTCA 57.379 28.000 19.17 15.25 0.00 4.26
237 238 8.223177 TGGTTGAAATTTTGAAAATTGCTCAT 57.777 26.923 19.17 4.01 0.00 2.90
238 239 8.129840 TGGTTGAAATTTTGAAAATTGCTCATG 58.870 29.630 19.17 0.00 0.00 3.07
239 240 8.130469 GGTTGAAATTTTGAAAATTGCTCATGT 58.870 29.630 19.17 2.73 0.00 3.21
240 241 9.505995 GTTGAAATTTTGAAAATTGCTCATGTT 57.494 25.926 19.17 2.08 0.00 2.71
242 243 9.719279 TGAAATTTTGAAAATTGCTCATGTTTC 57.281 25.926 19.17 10.40 0.00 2.78
243 244 9.172820 GAAATTTTGAAAATTGCTCATGTTTCC 57.827 29.630 15.79 0.00 0.00 3.13
244 245 6.616774 TTTTGAAAATTGCTCATGTTTCCC 57.383 33.333 0.00 0.00 0.00 3.97
245 246 4.952071 TGAAAATTGCTCATGTTTCCCA 57.048 36.364 0.00 0.00 0.00 4.37
246 247 5.287674 TGAAAATTGCTCATGTTTCCCAA 57.712 34.783 0.00 0.00 0.00 4.12
247 248 5.678583 TGAAAATTGCTCATGTTTCCCAAA 58.321 33.333 0.00 0.00 0.00 3.28
248 249 6.118170 TGAAAATTGCTCATGTTTCCCAAAA 58.882 32.000 0.00 0.00 0.00 2.44
249 250 6.600822 TGAAAATTGCTCATGTTTCCCAAAAA 59.399 30.769 0.00 0.00 0.00 1.94
312 313 9.657419 AATGACCTCATTTGGAAAAATATGTTC 57.343 29.630 0.00 0.00 43.48 3.18
313 314 7.312154 TGACCTCATTTGGAAAAATATGTTCG 58.688 34.615 0.00 0.00 0.00 3.95
314 315 7.175816 TGACCTCATTTGGAAAAATATGTTCGA 59.824 33.333 0.00 0.00 0.00 3.71
315 316 7.891561 ACCTCATTTGGAAAAATATGTTCGAA 58.108 30.769 0.00 0.00 0.00 3.71
316 317 8.364142 ACCTCATTTGGAAAAATATGTTCGAAA 58.636 29.630 0.00 10.18 37.19 3.46
317 318 9.369904 CCTCATTTGGAAAAATATGTTCGAAAT 57.630 29.630 0.00 12.69 41.32 2.17
333 334 9.912634 ATGTTCGAAATTTTGATACTTGTTCAT 57.087 25.926 8.97 2.88 0.00 2.57
345 346 9.996554 TTGATACTTGTTCATAGTTTCAAGAGA 57.003 29.630 10.09 0.00 38.09 3.10
346 347 9.996554 TGATACTTGTTCATAGTTTCAAGAGAA 57.003 29.630 10.09 0.00 39.39 2.87
397 398 8.783833 TTCCAAAAATTCAGTTCACATTTTCA 57.216 26.923 0.00 0.00 30.50 2.69
398 399 8.783833 TCCAAAAATTCAGTTCACATTTTCAA 57.216 26.923 0.00 0.00 30.50 2.69
399 400 9.224267 TCCAAAAATTCAGTTCACATTTTCAAA 57.776 25.926 0.00 0.00 30.50 2.69
408 409 9.823098 TCAGTTCACATTTTCAAATTTTGTTTG 57.177 25.926 8.89 5.71 0.00 2.93
409 410 9.609950 CAGTTCACATTTTCAAATTTTGTTTGT 57.390 25.926 8.89 6.23 0.00 2.83
421 422 9.884465 TCAAATTTTGTTTGTTTTTGAATTCGT 57.116 22.222 8.89 0.00 34.39 3.85
422 423 9.920043 CAAATTTTGTTTGTTTTTGAATTCGTG 57.080 25.926 0.04 0.00 30.69 4.35
423 424 9.884465 AAATTTTGTTTGTTTTTGAATTCGTGA 57.116 22.222 0.04 0.00 0.00 4.35
426 427 9.884465 TTTTGTTTGTTTTTGAATTCGTGATTT 57.116 22.222 0.04 0.00 0.00 2.17
427 428 9.884465 TTTGTTTGTTTTTGAATTCGTGATTTT 57.116 22.222 0.04 0.00 0.00 1.82
428 429 9.884465 TTGTTTGTTTTTGAATTCGTGATTTTT 57.116 22.222 0.04 0.00 0.00 1.94
647 650 9.535170 TTGTATTAGTGTATTTTGGGGAATTCA 57.465 29.630 7.93 0.00 0.00 2.57
657 660 9.936759 GTATTTTGGGGAATTCACAAGATTTTA 57.063 29.630 10.48 0.00 0.00 1.52
686 689 6.381994 ACTCCCTTCGTTCCATAATACTTGTA 59.618 38.462 0.00 0.00 0.00 2.41
688 691 6.608405 TCCCTTCGTTCCATAATACTTGTAGA 59.392 38.462 0.00 0.00 0.00 2.59
742 745 6.576551 TTTTTGTGCCGTGAAAAGAAATAC 57.423 33.333 0.00 0.00 0.00 1.89
747 750 3.500680 TGCCGTGAAAAGAAATACCAGAC 59.499 43.478 0.00 0.00 0.00 3.51
750 753 4.517453 CCGTGAAAAGAAATACCAGACCAA 59.483 41.667 0.00 0.00 0.00 3.67
1081 1091 0.898320 ACTCCTTCGTCCTCCATGTG 59.102 55.000 0.00 0.00 0.00 3.21
1082 1097 0.460987 CTCCTTCGTCCTCCATGTGC 60.461 60.000 0.00 0.00 0.00 4.57
1117 1133 0.915364 ATCAAGTCAAGCTCCCCTCC 59.085 55.000 0.00 0.00 0.00 4.30
1229 1245 3.119096 GCGCCGAGGTTCTTCCAC 61.119 66.667 0.00 0.00 39.02 4.02
1234 1250 1.371183 CGAGGTTCTTCCACAGCCA 59.629 57.895 0.00 0.00 39.02 4.75
1268 1284 5.205056 ACATACACTTTTGTTTCCCTTCCA 58.795 37.500 0.00 0.00 37.15 3.53
1271 1287 4.030216 ACACTTTTGTTTCCCTTCCACAT 58.970 39.130 0.00 0.00 28.43 3.21
1273 1289 5.301805 ACACTTTTGTTTCCCTTCCACATAG 59.698 40.000 0.00 0.00 28.43 2.23
1274 1290 5.301805 CACTTTTGTTTCCCTTCCACATAGT 59.698 40.000 0.00 0.00 0.00 2.12
1275 1291 5.897250 ACTTTTGTTTCCCTTCCACATAGTT 59.103 36.000 0.00 0.00 0.00 2.24
1276 1292 7.013846 CACTTTTGTTTCCCTTCCACATAGTTA 59.986 37.037 0.00 0.00 0.00 2.24
1277 1293 6.887626 TTTGTTTCCCTTCCACATAGTTAC 57.112 37.500 0.00 0.00 0.00 2.50
1278 1294 5.570205 TGTTTCCCTTCCACATAGTTACA 57.430 39.130 0.00 0.00 0.00 2.41
1279 1295 5.942961 TGTTTCCCTTCCACATAGTTACAA 58.057 37.500 0.00 0.00 0.00 2.41
1325 1365 6.568844 CGGGCTATGCAAACTTAAGTGTAAAA 60.569 38.462 9.34 0.00 0.00 1.52
1326 1366 6.806739 GGGCTATGCAAACTTAAGTGTAAAAG 59.193 38.462 9.34 4.56 0.00 2.27
1327 1367 7.308951 GGGCTATGCAAACTTAAGTGTAAAAGA 60.309 37.037 9.34 0.00 0.00 2.52
1328 1368 8.244113 GGCTATGCAAACTTAAGTGTAAAAGAT 58.756 33.333 9.34 0.00 0.00 2.40
1329 1369 9.065871 GCTATGCAAACTTAAGTGTAAAAGATG 57.934 33.333 9.34 0.63 0.00 2.90
1332 1372 8.220755 TGCAAACTTAAGTGTAAAAGATGAGT 57.779 30.769 9.34 0.00 0.00 3.41
1344 1384 5.904362 AAAAGATGAGTCAATGTTAGGCC 57.096 39.130 0.00 0.00 0.00 5.19
1418 1462 3.323403 CCTTTCTTTGTTGGCCCATAACA 59.677 43.478 0.00 0.63 36.34 2.41
1419 1463 4.020307 CCTTTCTTTGTTGGCCCATAACAT 60.020 41.667 7.87 0.00 37.81 2.71
1454 1519 4.098807 GTGTGGTGGTTAATGTGGAAACTT 59.901 41.667 0.00 0.00 0.00 2.66
1496 1561 5.422666 CAATGCTGAATTGCCGATACTAA 57.577 39.130 0.00 0.00 39.36 2.24
1546 1611 6.992063 TTCTTCTTCTGCATATTTCCTGTC 57.008 37.500 0.00 0.00 0.00 3.51
1577 1642 3.222173 AGACGCCATCAGTCTATCTCT 57.778 47.619 0.00 0.00 46.06 3.10
1580 1645 3.495331 ACGCCATCAGTCTATCTCTCAT 58.505 45.455 0.00 0.00 0.00 2.90
1605 1670 0.395036 TGTACCCATCCCCAAATGCG 60.395 55.000 0.00 0.00 0.00 4.73
1606 1671 1.106944 GTACCCATCCCCAAATGCGG 61.107 60.000 0.00 0.00 0.00 5.69
1749 1826 4.402829 TGAACTTGCAGGCCTTTGTTATA 58.597 39.130 0.00 0.00 0.00 0.98
1770 1847 8.768955 GTTATATTGTCATCTTCTAGTTGCTGG 58.231 37.037 0.00 0.00 0.00 4.85
1771 1848 2.977914 TGTCATCTTCTAGTTGCTGGC 58.022 47.619 0.00 0.00 0.00 4.85
1859 1949 6.403333 TTGCTGAACTAATAAGTACTTGCG 57.597 37.500 18.56 6.12 33.75 4.85
1860 1950 5.716094 TGCTGAACTAATAAGTACTTGCGA 58.284 37.500 18.56 0.00 33.75 5.10
1861 1951 6.160684 TGCTGAACTAATAAGTACTTGCGAA 58.839 36.000 18.56 0.00 33.75 4.70
1862 1952 6.310467 TGCTGAACTAATAAGTACTTGCGAAG 59.690 38.462 18.56 11.82 33.75 3.79
1924 2031 3.860930 TTGGTCCTTGAAGGCCGGC 62.861 63.158 21.18 21.18 35.26 6.13
2131 2255 1.856629 ATCATGGCTGGGACAAAAGG 58.143 50.000 0.00 0.00 38.70 3.11
2146 2270 3.263425 ACAAAAGGAGGCGAGGATAAAGA 59.737 43.478 0.00 0.00 0.00 2.52
2147 2271 4.080299 ACAAAAGGAGGCGAGGATAAAGAT 60.080 41.667 0.00 0.00 0.00 2.40
2148 2272 4.779993 AAAGGAGGCGAGGATAAAGATT 57.220 40.909 0.00 0.00 0.00 2.40
2246 2370 6.795399 GGAAAATGATCCTGCTAAAATTCGA 58.205 36.000 0.00 0.00 36.50 3.71
2257 2381 8.576442 TCCTGCTAAAATTCGAATCTTCTTTTT 58.424 29.630 11.83 10.22 0.00 1.94
2292 2416 3.541224 GGAGCTCCACCTCTCCATA 57.459 57.895 28.43 0.00 46.24 2.74
2450 2574 2.567169 AGCACACCATACTGCAACTCTA 59.433 45.455 0.00 0.00 35.73 2.43
2496 2620 0.041090 AAACCCTATGCCCCTGTTGG 59.959 55.000 0.00 0.00 0.00 3.77
2589 2713 7.363793 GCATGATAGAACCCCAAATAAAGTGTT 60.364 37.037 0.00 0.00 0.00 3.32
2605 2729 9.847224 AATAAAGTGTTGAGGAAAGAAACTCTA 57.153 29.630 0.00 0.00 34.84 2.43
2609 2733 8.019656 AGTGTTGAGGAAAGAAACTCTAACTA 57.980 34.615 0.00 0.00 34.84 2.24
2610 2734 8.145122 AGTGTTGAGGAAAGAAACTCTAACTAG 58.855 37.037 0.00 0.00 34.84 2.57
2611 2735 6.929606 TGTTGAGGAAAGAAACTCTAACTAGC 59.070 38.462 0.00 0.00 34.84 3.42
2612 2736 6.919775 TGAGGAAAGAAACTCTAACTAGCT 57.080 37.500 0.00 0.00 34.84 3.32
2613 2737 8.305317 GTTGAGGAAAGAAACTCTAACTAGCTA 58.695 37.037 0.00 0.00 34.84 3.32
2614 2738 8.596781 TGAGGAAAGAAACTCTAACTAGCTAT 57.403 34.615 0.00 0.00 34.84 2.97
2615 2739 8.470805 TGAGGAAAGAAACTCTAACTAGCTATG 58.529 37.037 0.00 0.00 34.84 2.23
2616 2740 7.787028 AGGAAAGAAACTCTAACTAGCTATGG 58.213 38.462 0.00 0.00 0.00 2.74
2617 2741 7.620094 AGGAAAGAAACTCTAACTAGCTATGGA 59.380 37.037 0.00 0.00 0.00 3.41
2618 2742 7.707464 GGAAAGAAACTCTAACTAGCTATGGAC 59.293 40.741 0.00 0.00 0.00 4.02
2621 2745 6.322712 AGAAACTCTAACTAGCTATGGACAGG 59.677 42.308 0.00 0.00 0.00 4.00
2622 2746 4.475345 ACTCTAACTAGCTATGGACAGGG 58.525 47.826 0.00 0.00 0.00 4.45
2623 2747 3.829601 CTCTAACTAGCTATGGACAGGGG 59.170 52.174 0.00 0.00 0.00 4.79
2624 2748 2.570386 AACTAGCTATGGACAGGGGT 57.430 50.000 0.00 0.00 0.00 4.95
2625 2749 1.794714 ACTAGCTATGGACAGGGGTG 58.205 55.000 0.00 0.00 0.00 4.61
2628 2752 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
2629 2753 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
2633 2757 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
2634 2758 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
2635 2759 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
2636 2760 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
2637 2761 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
2638 2762 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
2639 2763 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
2640 2764 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
2642 2766 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
2643 2767 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
2646 2770 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
2649 2773 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
2650 2774 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
2651 2775 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
2652 2776 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
2653 2777 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
2654 2778 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
2655 2779 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
2656 2780 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
2661 2785 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
2662 2786 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
2663 2787 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
2664 2788 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
2672 2796 3.474806 CCATGAGTTGGTCGCGAC 58.525 61.111 30.67 30.67 40.99 5.19
2673 2797 1.374125 CCATGAGTTGGTCGCGACA 60.374 57.895 37.26 22.12 40.99 4.35
2674 2798 0.740868 CCATGAGTTGGTCGCGACAT 60.741 55.000 37.26 20.23 40.99 3.06
2675 2799 0.647410 CATGAGTTGGTCGCGACATC 59.353 55.000 37.26 27.29 0.00 3.06
2676 2800 0.532573 ATGAGTTGGTCGCGACATCT 59.467 50.000 37.26 29.21 0.00 2.90
2677 2801 0.317160 TGAGTTGGTCGCGACATCTT 59.683 50.000 37.26 21.25 0.00 2.40
2678 2802 1.542472 TGAGTTGGTCGCGACATCTTA 59.458 47.619 37.26 24.26 0.00 2.10
2679 2803 2.165641 TGAGTTGGTCGCGACATCTTAT 59.834 45.455 37.26 19.26 0.00 1.73
2680 2804 2.535984 GAGTTGGTCGCGACATCTTATG 59.464 50.000 37.26 0.00 0.00 1.90
2681 2805 1.593006 GTTGGTCGCGACATCTTATGG 59.407 52.381 37.26 0.00 33.60 2.74
2682 2806 0.104120 TGGTCGCGACATCTTATGGG 59.896 55.000 37.26 0.00 33.60 4.00
2683 2807 0.104304 GGTCGCGACATCTTATGGGT 59.896 55.000 37.26 0.00 33.60 4.51
2684 2808 1.472728 GGTCGCGACATCTTATGGGTT 60.473 52.381 37.26 0.00 33.60 4.11
2685 2809 2.277084 GTCGCGACATCTTATGGGTTT 58.723 47.619 33.09 0.00 33.60 3.27
2686 2810 2.284417 GTCGCGACATCTTATGGGTTTC 59.716 50.000 33.09 0.00 33.60 2.78
2687 2811 2.093921 TCGCGACATCTTATGGGTTTCA 60.094 45.455 3.71 0.00 33.60 2.69
2688 2812 2.030457 CGCGACATCTTATGGGTTTCAC 59.970 50.000 0.00 0.00 33.60 3.18
2689 2813 2.354821 GCGACATCTTATGGGTTTCACC 59.645 50.000 0.00 0.00 37.60 4.02
2690 2814 3.873910 CGACATCTTATGGGTTTCACCT 58.126 45.455 0.00 0.00 38.64 4.00
2691 2815 3.871594 CGACATCTTATGGGTTTCACCTC 59.128 47.826 0.00 0.00 38.64 3.85
2692 2816 4.383118 CGACATCTTATGGGTTTCACCTCT 60.383 45.833 0.00 0.00 38.64 3.69
2693 2817 5.163447 CGACATCTTATGGGTTTCACCTCTA 60.163 44.000 0.00 0.00 38.64 2.43
2694 2818 6.240549 ACATCTTATGGGTTTCACCTCTAG 57.759 41.667 0.00 0.00 38.64 2.43
2695 2819 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2696 2820 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2697 2821 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2698 2822 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2699 2823 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2700 2824 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2701 2825 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2702 2826 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2703 2827 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2704 2828 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2705 2829 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2706 2830 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2707 2831 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2708 2832 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
2709 2833 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2710 2834 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2711 2835 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2712 2836 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2723 2847 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
2724 2848 2.594131 ACTTGTTTGGGACTAAAGGCC 58.406 47.619 0.00 0.00 0.00 5.19
2725 2849 2.177016 ACTTGTTTGGGACTAAAGGCCT 59.823 45.455 0.00 0.00 0.00 5.19
2726 2850 3.230976 CTTGTTTGGGACTAAAGGCCTT 58.769 45.455 13.78 13.78 0.00 4.35
2727 2851 2.593026 TGTTTGGGACTAAAGGCCTTG 58.407 47.619 21.33 10.33 0.00 3.61
2728 2852 2.091555 TGTTTGGGACTAAAGGCCTTGT 60.092 45.455 21.33 14.08 0.00 3.16
2729 2853 2.963101 GTTTGGGACTAAAGGCCTTGTT 59.037 45.455 21.33 6.88 0.00 2.83
2730 2854 2.286365 TGGGACTAAAGGCCTTGTTG 57.714 50.000 21.33 14.45 0.00 3.33
2731 2855 1.497286 TGGGACTAAAGGCCTTGTTGT 59.503 47.619 21.33 17.67 0.00 3.32
2732 2856 2.091555 TGGGACTAAAGGCCTTGTTGTT 60.092 45.455 21.33 5.13 0.00 2.83
2733 2857 2.296190 GGGACTAAAGGCCTTGTTGTTG 59.704 50.000 21.33 6.79 0.00 3.33
2734 2858 2.956333 GGACTAAAGGCCTTGTTGTTGT 59.044 45.455 21.33 10.34 0.00 3.32
2735 2859 3.383505 GGACTAAAGGCCTTGTTGTTGTT 59.616 43.478 21.33 2.55 0.00 2.83
2736 2860 4.359706 GACTAAAGGCCTTGTTGTTGTTG 58.640 43.478 21.33 4.83 0.00 3.33
2737 2861 3.767131 ACTAAAGGCCTTGTTGTTGTTGT 59.233 39.130 21.33 5.53 0.00 3.32
2738 2862 3.694043 AAAGGCCTTGTTGTTGTTGTT 57.306 38.095 21.33 0.00 0.00 2.83
2739 2863 2.671130 AGGCCTTGTTGTTGTTGTTG 57.329 45.000 0.00 0.00 0.00 3.33
2740 2864 1.899142 AGGCCTTGTTGTTGTTGTTGT 59.101 42.857 0.00 0.00 0.00 3.32
2741 2865 2.301583 AGGCCTTGTTGTTGTTGTTGTT 59.698 40.909 0.00 0.00 0.00 2.83
2742 2866 2.414825 GGCCTTGTTGTTGTTGTTGTTG 59.585 45.455 0.00 0.00 0.00 3.33
2779 2903 8.486210 AGTCTCAAAATATTATACTGAGCACCA 58.514 33.333 10.00 0.00 34.73 4.17
2817 2942 8.959548 TCACAATCTTTCTTGCATGTTACATAT 58.040 29.630 0.00 0.00 0.00 1.78
3135 3260 2.907634 TGTTTCGTCCTGCAGTGTTAA 58.092 42.857 13.81 0.00 0.00 2.01
3139 3264 3.610040 TCGTCCTGCAGTGTTAATGAT 57.390 42.857 13.81 0.00 0.00 2.45
3330 3455 0.647410 GATCTTGTGTGATCCGTGCG 59.353 55.000 0.00 0.00 37.47 5.34
3535 3661 4.202264 CCTTCCTATCAGGTGAATTAGCGT 60.202 45.833 0.00 0.00 36.53 5.07
3555 3681 4.495844 GCGTAGACTTTTCTGCTTTGTGTT 60.496 41.667 0.00 0.00 32.49 3.32
3556 3682 5.198274 CGTAGACTTTTCTGCTTTGTGTTC 58.802 41.667 0.00 0.00 32.49 3.18
3574 3700 3.442977 TGTTCGAGTCCTCCTTTACTAGC 59.557 47.826 0.00 0.00 0.00 3.42
3665 3791 2.208431 CTCATGGAGAAAGTGATCCGC 58.792 52.381 0.00 0.00 38.52 5.54
3731 3857 5.069501 ACAGTAAAGGTACAGAATCCGAC 57.930 43.478 0.00 0.00 32.12 4.79
3860 3991 2.289820 ACATTCTGCAGCGCATCAATAG 59.710 45.455 11.47 0.00 38.13 1.73
3899 4032 0.112412 AGCGGGGAAAGTGGATGTTT 59.888 50.000 0.00 0.00 0.00 2.83
3910 4043 6.294731 GGAAAGTGGATGTTTTGTTCATAGCT 60.295 38.462 0.00 0.00 0.00 3.32
3991 4124 0.108329 TTCGCGGTCCTTGATTCCTC 60.108 55.000 6.13 0.00 0.00 3.71
3992 4125 0.970937 TCGCGGTCCTTGATTCCTCT 60.971 55.000 6.13 0.00 0.00 3.69
4087 4224 2.032965 TGGTACCCCAGAGTTTAGCA 57.967 50.000 10.07 0.00 35.17 3.49
4126 4263 1.344942 CCGTCTCGTTTCCGCAAGAG 61.345 60.000 0.00 0.00 43.02 2.85
4150 4287 1.904865 TCCTACGACCGGCACAGTT 60.905 57.895 0.00 0.00 0.00 3.16
4211 4348 4.020485 GTGTATAACAGTGACTCAAGGGGT 60.020 45.833 0.00 0.00 0.00 4.95
4219 4356 1.613630 ACTCAAGGGGTCGATGGCT 60.614 57.895 0.00 0.00 0.00 4.75
4220 4357 1.201429 ACTCAAGGGGTCGATGGCTT 61.201 55.000 0.00 0.00 0.00 4.35
4221 4358 0.745845 CTCAAGGGGTCGATGGCTTG 60.746 60.000 0.00 0.00 0.00 4.01
4222 4359 1.198094 TCAAGGGGTCGATGGCTTGA 61.198 55.000 0.00 0.00 0.00 3.02
4223 4360 0.107017 CAAGGGGTCGATGGCTTGAT 60.107 55.000 0.00 0.00 0.00 2.57
4224 4361 1.140852 CAAGGGGTCGATGGCTTGATA 59.859 52.381 0.00 0.00 0.00 2.15
4225 4362 0.759346 AGGGGTCGATGGCTTGATAC 59.241 55.000 0.00 0.00 0.00 2.24
4226 4363 0.600255 GGGGTCGATGGCTTGATACG 60.600 60.000 0.00 0.00 0.00 3.06
4249 4386 4.701663 CAACATCTGGTGCGACCT 57.298 55.556 6.83 0.00 39.58 3.85
4263 4408 1.374758 GACCTGCTGTCCCAAGTCG 60.375 63.158 0.00 0.00 38.09 4.18
4277 4422 3.399330 CCAAGTCGTGTTGGTCTGTATT 58.601 45.455 9.57 0.00 41.96 1.89
4283 4428 4.746115 GTCGTGTTGGTCTGTATTGTAACA 59.254 41.667 0.00 0.00 0.00 2.41
4303 4448 7.972277 TGTAACAGCTAGGAAAGTAAAGTATCG 59.028 37.037 0.00 0.00 0.00 2.92
4370 4518 2.293399 ACCGTGGAAGTCAAGAAATTGC 59.707 45.455 0.00 0.00 0.00 3.56
4390 4541 3.245016 TGCTCTTCCAATCAACATGTCCT 60.245 43.478 0.00 0.00 0.00 3.85
4455 4607 0.456995 CGGCCTCTCGACTGTTCTTC 60.457 60.000 0.00 0.00 0.00 2.87
4493 4646 2.363788 TTTCGAGCAGCGTCTGTATT 57.636 45.000 8.32 0.00 41.80 1.89
4494 4647 1.909376 TTCGAGCAGCGTCTGTATTC 58.091 50.000 8.32 4.36 41.80 1.75
4495 4648 1.095600 TCGAGCAGCGTCTGTATTCT 58.904 50.000 8.32 0.00 41.80 2.40
4496 4649 1.472878 TCGAGCAGCGTCTGTATTCTT 59.527 47.619 8.32 0.00 41.80 2.52
4497 4650 2.094700 TCGAGCAGCGTCTGTATTCTTT 60.095 45.455 8.32 0.00 41.80 2.52
4498 4651 3.128068 TCGAGCAGCGTCTGTATTCTTTA 59.872 43.478 8.32 0.00 41.80 1.85
4499 4652 3.857665 CGAGCAGCGTCTGTATTCTTTAA 59.142 43.478 8.32 0.00 33.43 1.52
4500 4653 4.504461 CGAGCAGCGTCTGTATTCTTTAAT 59.496 41.667 8.32 0.00 33.43 1.40
4522 4675 2.662006 ATGCATATGGGATCGTCTCG 57.338 50.000 0.00 0.00 0.00 4.04
4523 4676 1.328279 TGCATATGGGATCGTCTCGT 58.672 50.000 4.56 0.00 0.00 4.18
4524 4677 1.686587 TGCATATGGGATCGTCTCGTT 59.313 47.619 4.56 0.00 0.00 3.85
4525 4678 2.102420 TGCATATGGGATCGTCTCGTTT 59.898 45.455 4.56 0.00 0.00 3.60
4526 4679 2.731976 GCATATGGGATCGTCTCGTTTC 59.268 50.000 4.56 0.00 0.00 2.78
4539 4692 0.801872 TCGTTTCATGTTGGCCATCG 59.198 50.000 6.09 2.17 0.00 3.84
4590 4743 2.290008 TGCCGTGGAAGCTTTTCATCTA 60.290 45.455 0.00 0.00 0.00 1.98
4708 4867 4.409588 CGCGTGCGTTCTTGACCG 62.410 66.667 6.00 0.00 34.35 4.79
4731 4890 0.373716 CTTGTGGCTATCCGTTTCGC 59.626 55.000 0.00 0.00 34.14 4.70
4734 4893 2.188469 GGCTATCCGTTTCGCCCA 59.812 61.111 0.00 0.00 36.56 5.36
4735 4894 1.227853 GGCTATCCGTTTCGCCCAT 60.228 57.895 0.00 0.00 36.56 4.00
4742 4901 2.877691 GTTTCGCCCATCCTGCAC 59.122 61.111 0.00 0.00 0.00 4.57
4751 4910 1.070445 CATCCTGCACCGATCCTCC 59.930 63.158 0.00 0.00 0.00 4.30
4752 4911 1.383109 ATCCTGCACCGATCCTCCA 60.383 57.895 0.00 0.00 0.00 3.86
4753 4912 0.765903 ATCCTGCACCGATCCTCCAT 60.766 55.000 0.00 0.00 0.00 3.41
4757 4916 1.451927 GCACCGATCCTCCATTGCA 60.452 57.895 0.00 0.00 0.00 4.08
4759 4918 0.392863 CACCGATCCTCCATTGCACA 60.393 55.000 0.00 0.00 0.00 4.57
4760 4919 0.392998 ACCGATCCTCCATTGCACAC 60.393 55.000 0.00 0.00 0.00 3.82
4761 4920 1.431488 CCGATCCTCCATTGCACACG 61.431 60.000 0.00 0.00 0.00 4.49
4763 4922 1.737838 GATCCTCCATTGCACACGAA 58.262 50.000 0.00 0.00 0.00 3.85
4765 4924 0.684535 TCCTCCATTGCACACGAAGA 59.315 50.000 0.00 0.00 0.00 2.87
4767 4926 1.609061 CCTCCATTGCACACGAAGAGT 60.609 52.381 0.00 0.00 0.00 3.24
4768 4927 2.353704 CCTCCATTGCACACGAAGAGTA 60.354 50.000 0.00 0.00 0.00 2.59
4771 4930 2.668457 CCATTGCACACGAAGAGTACTC 59.332 50.000 15.41 15.41 0.00 2.59
4773 4932 1.324383 TGCACACGAAGAGTACTCCA 58.676 50.000 19.38 4.76 0.00 3.86
4774 4933 1.684450 TGCACACGAAGAGTACTCCAA 59.316 47.619 19.38 0.00 0.00 3.53
4775 4934 2.059541 GCACACGAAGAGTACTCCAAC 58.940 52.381 19.38 9.88 0.00 3.77
4776 4935 2.673833 CACACGAAGAGTACTCCAACC 58.326 52.381 19.38 5.44 0.00 3.77
4834 5040 4.072131 CAACCGATCCGAATAAATGGGAT 58.928 43.478 0.00 0.00 43.09 3.85
5035 5251 0.176680 CCGACCATCCAGAAGAGGTG 59.823 60.000 0.00 0.00 33.77 4.00
5103 5319 1.269998 ACACGCTCTTACCAGTGACTC 59.730 52.381 1.24 0.00 37.95 3.36
5107 5323 1.336887 GCTCTTACCAGTGACTCGCAA 60.337 52.381 0.00 0.00 0.00 4.85
5121 5337 1.253800 CTCGCAACGACTGATCAATCG 59.746 52.381 23.72 23.72 43.97 3.34
5133 5349 2.745281 TGATCAATCGGACGGTTTTTCC 59.255 45.455 0.00 0.00 0.00 3.13
5134 5350 2.554370 TCAATCGGACGGTTTTTCCT 57.446 45.000 0.00 0.00 0.00 3.36
5153 5369 3.204827 CCGATTCCCAGCGCCAAG 61.205 66.667 2.29 0.00 0.00 3.61
5307 5528 3.406361 GAGGTGTGTGCGCGTCAG 61.406 66.667 8.43 0.00 39.14 3.51
5308 5529 4.221422 AGGTGTGTGCGCGTCAGT 62.221 61.111 8.43 0.00 0.00 3.41
5309 5530 4.000557 GGTGTGTGCGCGTCAGTG 62.001 66.667 8.43 0.00 0.00 3.66
5310 5531 3.261951 GTGTGTGCGCGTCAGTGT 61.262 61.111 8.43 0.00 0.00 3.55
5311 5532 3.261216 TGTGTGCGCGTCAGTGTG 61.261 61.111 8.43 0.00 0.00 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.057946 ACGGAAGGAGTACAACTTCGTAC 60.058 47.826 17.79 8.09 43.03 3.67
10 11 3.149196 ACGGAAGGAGTACAACTTCGTA 58.851 45.455 17.79 0.00 43.03 3.43
11 12 1.959282 ACGGAAGGAGTACAACTTCGT 59.041 47.619 17.79 16.10 43.03 3.85
12 13 2.593257 GACGGAAGGAGTACAACTTCG 58.407 52.381 17.79 15.66 43.03 3.79
13 14 2.353505 GGGACGGAAGGAGTACAACTTC 60.354 54.545 16.75 16.75 41.75 3.01
14 15 1.622312 GGGACGGAAGGAGTACAACTT 59.378 52.381 0.00 0.00 0.00 2.66
15 16 1.264295 GGGACGGAAGGAGTACAACT 58.736 55.000 0.00 0.00 0.00 3.16
16 17 0.971386 TGGGACGGAAGGAGTACAAC 59.029 55.000 0.00 0.00 0.00 3.32
17 18 1.719529 TTGGGACGGAAGGAGTACAA 58.280 50.000 0.00 0.00 0.00 2.41
18 19 1.719529 TTTGGGACGGAAGGAGTACA 58.280 50.000 0.00 0.00 0.00 2.90
19 20 2.845363 TTTTGGGACGGAAGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
20 21 4.533311 AGTTATTTTGGGACGGAAGGAGTA 59.467 41.667 0.00 0.00 0.00 2.59
21 22 3.329814 AGTTATTTTGGGACGGAAGGAGT 59.670 43.478 0.00 0.00 0.00 3.85
22 23 3.951663 AGTTATTTTGGGACGGAAGGAG 58.048 45.455 0.00 0.00 0.00 3.69
23 24 5.703730 ATAGTTATTTTGGGACGGAAGGA 57.296 39.130 0.00 0.00 0.00 3.36
24 25 6.769134 AAATAGTTATTTTGGGACGGAAGG 57.231 37.500 0.00 0.00 32.28 3.46
25 26 9.783256 CTTAAAATAGTTATTTTGGGACGGAAG 57.217 33.333 16.32 8.70 43.50 3.46
26 27 8.245491 GCTTAAAATAGTTATTTTGGGACGGAA 58.755 33.333 16.32 4.24 43.50 4.30
27 28 7.612633 AGCTTAAAATAGTTATTTTGGGACGGA 59.387 33.333 16.32 0.00 43.50 4.69
28 29 7.768240 AGCTTAAAATAGTTATTTTGGGACGG 58.232 34.615 16.32 5.21 43.50 4.79
71 72 8.512138 CGTCCCAAAATAAGTATCTCAACTTTT 58.488 33.333 0.00 0.00 40.20 2.27
72 73 7.120726 CCGTCCCAAAATAAGTATCTCAACTTT 59.879 37.037 0.00 0.00 40.20 2.66
73 74 6.598064 CCGTCCCAAAATAAGTATCTCAACTT 59.402 38.462 0.00 0.00 42.31 2.66
74 75 6.070424 TCCGTCCCAAAATAAGTATCTCAACT 60.070 38.462 0.00 0.00 0.00 3.16
75 76 6.110707 TCCGTCCCAAAATAAGTATCTCAAC 58.889 40.000 0.00 0.00 0.00 3.18
76 77 6.302535 TCCGTCCCAAAATAAGTATCTCAA 57.697 37.500 0.00 0.00 0.00 3.02
77 78 5.163343 CCTCCGTCCCAAAATAAGTATCTCA 60.163 44.000 0.00 0.00 0.00 3.27
78 79 5.298347 CCTCCGTCCCAAAATAAGTATCTC 58.702 45.833 0.00 0.00 0.00 2.75
79 80 4.102681 CCCTCCGTCCCAAAATAAGTATCT 59.897 45.833 0.00 0.00 0.00 1.98
80 81 4.102054 TCCCTCCGTCCCAAAATAAGTATC 59.898 45.833 0.00 0.00 0.00 2.24
81 82 4.042174 TCCCTCCGTCCCAAAATAAGTAT 58.958 43.478 0.00 0.00 0.00 2.12
82 83 3.452878 TCCCTCCGTCCCAAAATAAGTA 58.547 45.455 0.00 0.00 0.00 2.24
83 84 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
84 85 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
85 86 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
86 87 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
87 88 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
88 89 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
89 90 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
90 91 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
91 92 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
92 93 2.149973 TTTAGTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46
93 94 4.261952 GCTAATTTAGTACTCCCTCCGTCC 60.262 50.000 0.00 0.00 0.00 4.79
94 95 4.556302 CGCTAATTTAGTACTCCCTCCGTC 60.556 50.000 0.00 0.00 0.00 4.79
95 96 3.317430 CGCTAATTTAGTACTCCCTCCGT 59.683 47.826 0.00 0.00 0.00 4.69
96 97 3.567164 TCGCTAATTTAGTACTCCCTCCG 59.433 47.826 0.00 0.00 0.00 4.63
97 98 4.340381 TGTCGCTAATTTAGTACTCCCTCC 59.660 45.833 0.00 0.00 0.00 4.30
98 99 5.067544 ACTGTCGCTAATTTAGTACTCCCTC 59.932 44.000 0.00 0.00 0.00 4.30
99 100 4.954826 ACTGTCGCTAATTTAGTACTCCCT 59.045 41.667 0.00 0.00 0.00 4.20
100 101 5.259832 ACTGTCGCTAATTTAGTACTCCC 57.740 43.478 0.00 0.00 0.00 4.30
101 102 7.479150 ACTAACTGTCGCTAATTTAGTACTCC 58.521 38.462 0.00 0.00 32.47 3.85
103 104 9.947669 CATACTAACTGTCGCTAATTTAGTACT 57.052 33.333 0.00 0.00 37.81 2.73
104 105 9.178427 CCATACTAACTGTCGCTAATTTAGTAC 57.822 37.037 5.38 5.09 37.81 2.73
105 106 9.123902 TCCATACTAACTGTCGCTAATTTAGTA 57.876 33.333 5.38 0.00 38.78 1.82
106 107 8.004087 TCCATACTAACTGTCGCTAATTTAGT 57.996 34.615 5.38 0.00 36.97 2.24
107 108 8.916654 CATCCATACTAACTGTCGCTAATTTAG 58.083 37.037 0.00 0.00 0.00 1.85
108 109 7.870954 CCATCCATACTAACTGTCGCTAATTTA 59.129 37.037 0.00 0.00 0.00 1.40
109 110 6.706270 CCATCCATACTAACTGTCGCTAATTT 59.294 38.462 0.00 0.00 0.00 1.82
110 111 6.041637 TCCATCCATACTAACTGTCGCTAATT 59.958 38.462 0.00 0.00 0.00 1.40
111 112 5.538813 TCCATCCATACTAACTGTCGCTAAT 59.461 40.000 0.00 0.00 0.00 1.73
112 113 4.891168 TCCATCCATACTAACTGTCGCTAA 59.109 41.667 0.00 0.00 0.00 3.09
113 114 4.466827 TCCATCCATACTAACTGTCGCTA 58.533 43.478 0.00 0.00 0.00 4.26
114 115 3.296854 TCCATCCATACTAACTGTCGCT 58.703 45.455 0.00 0.00 0.00 4.93
115 116 3.728076 TCCATCCATACTAACTGTCGC 57.272 47.619 0.00 0.00 0.00 5.19
116 117 6.390721 CCTAATCCATCCATACTAACTGTCG 58.609 44.000 0.00 0.00 0.00 4.35
117 118 6.295916 CCCCTAATCCATCCATACTAACTGTC 60.296 46.154 0.00 0.00 0.00 3.51
118 119 5.548056 CCCCTAATCCATCCATACTAACTGT 59.452 44.000 0.00 0.00 0.00 3.55
119 120 5.045578 CCCCCTAATCCATCCATACTAACTG 60.046 48.000 0.00 0.00 0.00 3.16
120 121 5.101529 CCCCCTAATCCATCCATACTAACT 58.898 45.833 0.00 0.00 0.00 2.24
121 122 5.098663 TCCCCCTAATCCATCCATACTAAC 58.901 45.833 0.00 0.00 0.00 2.34
122 123 5.378165 TCCCCCTAATCCATCCATACTAA 57.622 43.478 0.00 0.00 0.00 2.24
123 124 5.378165 TTCCCCCTAATCCATCCATACTA 57.622 43.478 0.00 0.00 0.00 1.82
124 125 3.963525 TCCCCCTAATCCATCCATACT 57.036 47.619 0.00 0.00 0.00 2.12
125 126 6.848562 ATATTCCCCCTAATCCATCCATAC 57.151 41.667 0.00 0.00 0.00 2.39
126 127 7.862027 AAATATTCCCCCTAATCCATCCATA 57.138 36.000 0.00 0.00 0.00 2.74
127 128 6.758085 AAATATTCCCCCTAATCCATCCAT 57.242 37.500 0.00 0.00 0.00 3.41
128 129 6.125621 ACAAAATATTCCCCCTAATCCATCCA 60.126 38.462 0.00 0.00 0.00 3.41
129 130 6.322931 ACAAAATATTCCCCCTAATCCATCC 58.677 40.000 0.00 0.00 0.00 3.51
130 131 7.855784 AACAAAATATTCCCCCTAATCCATC 57.144 36.000 0.00 0.00 0.00 3.51
131 132 9.912461 AATAACAAAATATTCCCCCTAATCCAT 57.088 29.630 0.00 0.00 0.00 3.41
161 162 8.823818 CAAAACAAAGAAAATGAGAAGCAGAAT 58.176 29.630 0.00 0.00 0.00 2.40
162 163 8.034215 TCAAAACAAAGAAAATGAGAAGCAGAA 58.966 29.630 0.00 0.00 0.00 3.02
163 164 7.546358 TCAAAACAAAGAAAATGAGAAGCAGA 58.454 30.769 0.00 0.00 0.00 4.26
164 165 7.760131 TCAAAACAAAGAAAATGAGAAGCAG 57.240 32.000 0.00 0.00 0.00 4.24
165 166 8.545229 TTTCAAAACAAAGAAAATGAGAAGCA 57.455 26.923 0.00 0.00 31.35 3.91
166 167 9.992910 ATTTTCAAAACAAAGAAAATGAGAAGC 57.007 25.926 11.11 0.00 46.76 3.86
208 209 9.872721 AGCAATTTTCAAAATTTCAACCAATTT 57.127 22.222 5.29 0.00 37.86 1.82
209 210 9.518906 GAGCAATTTTCAAAATTTCAACCAATT 57.481 25.926 5.29 0.00 0.00 2.32
210 211 8.684520 TGAGCAATTTTCAAAATTTCAACCAAT 58.315 25.926 5.29 0.00 0.00 3.16
211 212 8.048534 TGAGCAATTTTCAAAATTTCAACCAA 57.951 26.923 5.29 0.00 0.00 3.67
212 213 7.621428 TGAGCAATTTTCAAAATTTCAACCA 57.379 28.000 5.29 0.00 0.00 3.67
213 214 8.130469 ACATGAGCAATTTTCAAAATTTCAACC 58.870 29.630 12.05 1.61 0.00 3.77
214 215 9.505995 AACATGAGCAATTTTCAAAATTTCAAC 57.494 25.926 12.05 5.31 0.00 3.18
216 217 9.719279 GAAACATGAGCAATTTTCAAAATTTCA 57.281 25.926 5.29 8.60 31.26 2.69
217 218 9.172820 GGAAACATGAGCAATTTTCAAAATTTC 57.827 29.630 5.29 1.19 30.88 2.17
218 219 8.136800 GGGAAACATGAGCAATTTTCAAAATTT 58.863 29.630 5.29 0.00 30.88 1.82
219 220 7.284944 TGGGAAACATGAGCAATTTTCAAAATT 59.715 29.630 1.98 1.98 30.88 1.82
220 221 6.771749 TGGGAAACATGAGCAATTTTCAAAAT 59.228 30.769 0.00 0.00 30.88 1.82
221 222 6.118170 TGGGAAACATGAGCAATTTTCAAAA 58.882 32.000 0.00 0.00 30.88 2.44
222 223 5.678583 TGGGAAACATGAGCAATTTTCAAA 58.321 33.333 0.00 0.00 30.88 2.69
223 224 5.287674 TGGGAAACATGAGCAATTTTCAA 57.712 34.783 0.00 0.00 30.88 2.69
224 225 4.952071 TGGGAAACATGAGCAATTTTCA 57.048 36.364 0.00 0.00 30.88 2.69
225 226 6.616774 TTTTGGGAAACATGAGCAATTTTC 57.383 33.333 0.00 0.00 0.00 2.29
287 288 7.975616 CGAACATATTTTTCCAAATGAGGTCAT 59.024 33.333 0.00 0.00 38.41 3.06
288 289 7.175816 TCGAACATATTTTTCCAAATGAGGTCA 59.824 33.333 0.00 0.00 34.29 4.02
289 290 7.535139 TCGAACATATTTTTCCAAATGAGGTC 58.465 34.615 0.00 0.00 34.29 3.85
290 291 7.461182 TCGAACATATTTTTCCAAATGAGGT 57.539 32.000 0.00 0.00 34.29 3.85
291 292 8.755696 TTTCGAACATATTTTTCCAAATGAGG 57.244 30.769 0.00 0.00 34.29 3.86
307 308 9.912634 ATGAACAAGTATCAAAATTTCGAACAT 57.087 25.926 0.00 0.00 0.00 2.71
319 320 9.996554 TCTCTTGAAACTATGAACAAGTATCAA 57.003 29.630 0.00 0.00 40.07 2.57
320 321 9.996554 TTCTCTTGAAACTATGAACAAGTATCA 57.003 29.630 0.00 0.00 40.07 2.15
371 372 9.224267 TGAAAATGTGAACTGAATTTTTGGAAA 57.776 25.926 0.00 0.00 34.51 3.13
372 373 8.783833 TGAAAATGTGAACTGAATTTTTGGAA 57.216 26.923 0.00 0.00 34.51 3.53
373 374 8.783833 TTGAAAATGTGAACTGAATTTTTGGA 57.216 26.923 0.00 0.00 34.51 3.53
382 383 9.823098 CAAACAAAATTTGAAAATGTGAACTGA 57.177 25.926 13.19 0.00 0.00 3.41
383 384 9.609950 ACAAACAAAATTTGAAAATGTGAACTG 57.390 25.926 13.19 0.00 33.83 3.16
395 396 9.884465 ACGAATTCAAAAACAAACAAAATTTGA 57.116 22.222 13.19 0.00 38.00 2.69
396 397 9.920043 CACGAATTCAAAAACAAACAAAATTTG 57.080 25.926 6.22 3.89 35.64 2.32
397 398 9.884465 TCACGAATTCAAAAACAAACAAAATTT 57.116 22.222 6.22 0.00 0.00 1.82
400 401 9.884465 AAATCACGAATTCAAAAACAAACAAAA 57.116 22.222 6.22 0.00 0.00 2.44
401 402 9.884465 AAAATCACGAATTCAAAAACAAACAAA 57.116 22.222 6.22 0.00 0.00 2.83
402 403 9.884465 AAAAATCACGAATTCAAAAACAAACAA 57.116 22.222 6.22 0.00 0.00 2.83
622 625 8.962679 GTGAATTCCCCAAAATACACTAATACA 58.037 33.333 2.27 0.00 0.00 2.29
623 626 8.962679 TGTGAATTCCCCAAAATACACTAATAC 58.037 33.333 2.27 0.00 0.00 1.89
624 627 9.535170 TTGTGAATTCCCCAAAATACACTAATA 57.465 29.630 2.27 0.00 0.00 0.98
625 628 8.429237 TTGTGAATTCCCCAAAATACACTAAT 57.571 30.769 2.27 0.00 0.00 1.73
634 637 9.859152 AAATAAAATCTTGTGAATTCCCCAAAA 57.141 25.926 2.27 0.00 0.00 2.44
646 649 8.040716 ACGAAGGGAGTAAATAAAATCTTGTG 57.959 34.615 0.00 0.00 0.00 3.33
647 650 8.631480 AACGAAGGGAGTAAATAAAATCTTGT 57.369 30.769 0.00 0.00 0.00 3.16
657 660 8.030913 AGTATTATGGAACGAAGGGAGTAAAT 57.969 34.615 0.00 0.00 0.00 1.40
765 768 4.262592 GGTGTGAGCCCATTTGAGATTTTT 60.263 41.667 0.00 0.00 0.00 1.94
766 769 3.259123 GGTGTGAGCCCATTTGAGATTTT 59.741 43.478 0.00 0.00 0.00 1.82
767 770 2.827921 GGTGTGAGCCCATTTGAGATTT 59.172 45.455 0.00 0.00 0.00 2.17
768 771 2.225091 TGGTGTGAGCCCATTTGAGATT 60.225 45.455 0.00 0.00 0.00 2.40
769 772 1.355381 TGGTGTGAGCCCATTTGAGAT 59.645 47.619 0.00 0.00 0.00 2.75
770 773 0.770499 TGGTGTGAGCCCATTTGAGA 59.230 50.000 0.00 0.00 0.00 3.27
818 826 4.264638 AGCCGTGTTTTGCCGCAC 62.265 61.111 0.00 0.00 0.00 5.34
822 830 2.065906 TTTCCGAGCCGTGTTTTGCC 62.066 55.000 0.00 0.00 0.00 4.52
1081 1091 1.748493 TGATTTGATTTGGGGCTACGC 59.252 47.619 0.00 0.00 0.00 4.42
1082 1097 3.443681 ACTTGATTTGATTTGGGGCTACG 59.556 43.478 0.00 0.00 0.00 3.51
1117 1133 5.474876 AGAAAATCAGCAAGAAACAGGTAGG 59.525 40.000 0.00 0.00 0.00 3.18
1229 1245 2.496899 ATGTACCTTGGTTCTGGCTG 57.503 50.000 0.00 0.00 0.00 4.85
1234 1250 6.362248 ACAAAAGTGTATGTACCTTGGTTCT 58.638 36.000 0.00 0.00 35.72 3.01
1268 1284 5.007626 CCGCTGCAATGTATTGTAACTATGT 59.992 40.000 0.00 0.00 39.88 2.29
1271 1287 3.874543 CCCGCTGCAATGTATTGTAACTA 59.125 43.478 0.00 0.00 39.88 2.24
1273 1289 2.794631 GCCCGCTGCAATGTATTGTAAC 60.795 50.000 0.00 0.00 39.88 2.50
1274 1290 1.403679 GCCCGCTGCAATGTATTGTAA 59.596 47.619 0.00 0.00 39.88 2.41
1275 1291 1.021202 GCCCGCTGCAATGTATTGTA 58.979 50.000 0.00 1.32 39.88 2.41
1276 1292 1.809207 GCCCGCTGCAATGTATTGT 59.191 52.632 0.00 0.00 39.88 2.71
1277 1293 4.715983 GCCCGCTGCAATGTATTG 57.284 55.556 0.00 0.28 40.77 1.90
1301 1317 5.890424 TTACACTTAAGTTTGCATAGCCC 57.110 39.130 5.07 0.00 0.00 5.19
1307 1347 8.220755 ACTCATCTTTTACACTTAAGTTTGCA 57.779 30.769 5.07 0.00 0.00 4.08
1325 1365 4.263462 TGTTGGCCTAACATTGACTCATCT 60.263 41.667 14.38 0.00 44.07 2.90
1326 1366 4.009675 TGTTGGCCTAACATTGACTCATC 58.990 43.478 14.38 0.00 44.07 2.92
1327 1367 4.032960 TGTTGGCCTAACATTGACTCAT 57.967 40.909 14.38 0.00 44.07 2.90
1328 1368 3.500448 TGTTGGCCTAACATTGACTCA 57.500 42.857 14.38 0.00 44.07 3.41
1344 1384 1.876156 GCTTGACTCAGGTCCTTGTTG 59.124 52.381 0.00 0.00 41.47 3.33
1418 1462 3.709653 ACCACCACACCAGTTCGATATAT 59.290 43.478 0.00 0.00 0.00 0.86
1419 1463 3.101437 ACCACCACACCAGTTCGATATA 58.899 45.455 0.00 0.00 0.00 0.86
1454 1519 1.269102 GCTAGAAGCTATTCGCGGTGA 60.269 52.381 6.13 0.00 45.59 4.02
1523 1588 6.475504 TGACAGGAAATATGCAGAAGAAGAA 58.524 36.000 0.00 0.00 0.00 2.52
1524 1589 6.053632 TGACAGGAAATATGCAGAAGAAGA 57.946 37.500 0.00 0.00 0.00 2.87
1525 1590 6.748333 TTGACAGGAAATATGCAGAAGAAG 57.252 37.500 0.00 0.00 0.00 2.85
1527 1592 6.182627 ACATTGACAGGAAATATGCAGAAGA 58.817 36.000 0.00 0.00 0.00 2.87
1528 1593 6.446781 ACATTGACAGGAAATATGCAGAAG 57.553 37.500 0.00 0.00 0.00 2.85
1529 1594 6.839124 AACATTGACAGGAAATATGCAGAA 57.161 33.333 0.00 0.00 0.00 3.02
1530 1595 6.350361 CCAAACATTGACAGGAAATATGCAGA 60.350 38.462 0.00 0.00 0.00 4.26
1531 1596 5.808540 CCAAACATTGACAGGAAATATGCAG 59.191 40.000 0.00 0.00 0.00 4.41
1532 1597 5.479724 TCCAAACATTGACAGGAAATATGCA 59.520 36.000 0.00 0.00 0.00 3.96
1533 1598 5.964758 TCCAAACATTGACAGGAAATATGC 58.035 37.500 0.00 0.00 0.00 3.14
1534 1599 7.756722 GTCTTCCAAACATTGACAGGAAATATG 59.243 37.037 0.00 0.00 37.86 1.78
1536 1601 6.072728 CGTCTTCCAAACATTGACAGGAAATA 60.073 38.462 0.00 0.00 37.86 1.40
1542 1607 2.350772 GGCGTCTTCCAAACATTGACAG 60.351 50.000 0.00 0.00 0.00 3.51
1546 1611 2.228582 TGATGGCGTCTTCCAAACATTG 59.771 45.455 8.40 0.00 39.96 2.82
1577 1642 1.064758 GGGATGGGTACAGCAACATGA 60.065 52.381 0.00 0.00 33.84 3.07
1580 1645 1.136961 TGGGGATGGGTACAGCAACA 61.137 55.000 0.00 0.00 33.84 3.33
1749 1826 3.944015 GCCAGCAACTAGAAGATGACAAT 59.056 43.478 0.00 0.00 0.00 2.71
1770 1847 0.179156 CATGACGAACAATGGCCTGC 60.179 55.000 3.32 0.00 0.00 4.85
1771 1848 1.135603 CACATGACGAACAATGGCCTG 60.136 52.381 3.32 0.00 0.00 4.85
1924 2031 4.040217 CCAGATTTGAGAGAGTCCCATAGG 59.960 50.000 0.00 0.00 0.00 2.57
2042 2150 3.633986 GGTGGGAAGCTCTGGAAATAATG 59.366 47.826 0.00 0.00 0.00 1.90
2044 2152 2.919602 AGGTGGGAAGCTCTGGAAATAA 59.080 45.455 0.00 0.00 0.00 1.40
2131 2255 4.054671 CACTGAATCTTTATCCTCGCCTC 58.945 47.826 0.00 0.00 0.00 4.70
2147 2271 9.725019 ACATGTAAATTCTTAGATGTCACTGAA 57.275 29.630 0.00 0.00 44.54 3.02
2148 2272 9.725019 AACATGTAAATTCTTAGATGTCACTGA 57.275 29.630 0.00 0.00 46.12 3.41
2257 2381 1.303074 CCTGCTGCTTGCTCTGGAA 60.303 57.895 0.00 0.00 43.37 3.53
2292 2416 5.126545 AGTTTTCGGCTGGTTTTTCTACTTT 59.873 36.000 0.00 0.00 0.00 2.66
2450 2574 1.934463 CAGCGAGCACGTTTTCAGT 59.066 52.632 5.23 0.00 41.98 3.41
2496 2620 3.639094 AGTCACACTGGATCTAGCATACC 59.361 47.826 5.91 0.00 0.00 2.73
2550 2674 1.760192 ATCATGCTTCTGTCAAGCCC 58.240 50.000 3.95 0.00 42.36 5.19
2589 2713 6.919775 AGCTAGTTAGAGTTTCTTTCCTCA 57.080 37.500 0.00 0.00 0.00 3.86
2605 2729 2.119495 CACCCCTGTCCATAGCTAGTT 58.881 52.381 0.00 0.00 0.00 2.24
2609 2733 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
2610 2734 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2611 2735 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
2612 2736 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
2613 2737 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
2615 2739 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
2616 2740 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
2617 2741 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
2618 2742 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
2621 2745 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
2622 2746 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
2623 2747 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
2624 2748 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
2625 2749 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
2628 2752 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
2629 2753 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
2633 2757 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
2634 2758 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
2635 2759 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
2636 2760 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
2637 2761 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
2638 2762 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
2639 2763 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
2640 2764 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
2642 2766 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
2643 2767 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
2646 2770 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
2656 2780 0.647410 GATGTCGCGACCAACTCATG 59.353 55.000 34.34 0.00 0.00 3.07
2661 2785 1.593006 CCATAAGATGTCGCGACCAAC 59.407 52.381 34.34 24.02 0.00 3.77
2662 2786 1.472552 CCCATAAGATGTCGCGACCAA 60.473 52.381 34.34 19.08 0.00 3.67
2663 2787 0.104120 CCCATAAGATGTCGCGACCA 59.896 55.000 34.34 22.80 0.00 4.02
2664 2788 0.104304 ACCCATAAGATGTCGCGACC 59.896 55.000 34.34 20.90 0.00 4.79
2665 2789 1.935933 AACCCATAAGATGTCGCGAC 58.064 50.000 31.66 31.66 0.00 5.19
2666 2790 2.093921 TGAAACCCATAAGATGTCGCGA 60.094 45.455 3.71 3.71 0.00 5.87
2667 2791 2.030457 GTGAAACCCATAAGATGTCGCG 59.970 50.000 0.00 0.00 0.00 5.87
2668 2792 3.675467 GTGAAACCCATAAGATGTCGC 57.325 47.619 0.00 0.00 0.00 5.19
2682 2806 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2683 2807 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2684 2808 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2685 2809 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2686 2810 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2687 2811 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2688 2812 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
2689 2813 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2690 2814 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2691 2815 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2692 2816 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2693 2817 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2702 2826 3.243737 GGCCTTTAGTCCCAAACAAGTTG 60.244 47.826 0.00 0.00 36.94 3.16
2703 2827 2.963101 GGCCTTTAGTCCCAAACAAGTT 59.037 45.455 0.00 0.00 0.00 2.66
2704 2828 2.177016 AGGCCTTTAGTCCCAAACAAGT 59.823 45.455 0.00 0.00 0.00 3.16
2705 2829 2.876581 AGGCCTTTAGTCCCAAACAAG 58.123 47.619 0.00 0.00 0.00 3.16
2706 2830 2.962421 CAAGGCCTTTAGTCCCAAACAA 59.038 45.455 17.61 0.00 0.00 2.83
2707 2831 2.091555 ACAAGGCCTTTAGTCCCAAACA 60.092 45.455 17.61 0.00 0.00 2.83
2708 2832 2.594131 ACAAGGCCTTTAGTCCCAAAC 58.406 47.619 17.61 0.00 0.00 2.93
2709 2833 2.962421 CAACAAGGCCTTTAGTCCCAAA 59.038 45.455 17.61 0.00 0.00 3.28
2710 2834 2.091555 ACAACAAGGCCTTTAGTCCCAA 60.092 45.455 17.61 0.00 0.00 4.12
2711 2835 1.497286 ACAACAAGGCCTTTAGTCCCA 59.503 47.619 17.61 0.00 0.00 4.37
2712 2836 2.287977 ACAACAAGGCCTTTAGTCCC 57.712 50.000 17.61 0.00 0.00 4.46
2713 2837 2.956333 ACAACAACAAGGCCTTTAGTCC 59.044 45.455 17.61 0.00 0.00 3.85
2714 2838 4.142249 ACAACAACAACAAGGCCTTTAGTC 60.142 41.667 17.61 0.00 0.00 2.59
2715 2839 3.767131 ACAACAACAACAAGGCCTTTAGT 59.233 39.130 17.61 9.24 0.00 2.24
2716 2840 4.385358 ACAACAACAACAAGGCCTTTAG 57.615 40.909 17.61 8.46 0.00 1.85
2717 2841 4.021016 ACAACAACAACAACAAGGCCTTTA 60.021 37.500 17.61 0.00 0.00 1.85
2718 2842 3.244387 ACAACAACAACAACAAGGCCTTT 60.244 39.130 17.61 4.68 0.00 3.11
2719 2843 2.301583 ACAACAACAACAACAAGGCCTT 59.698 40.909 13.78 13.78 0.00 4.35
2720 2844 1.899142 ACAACAACAACAACAAGGCCT 59.101 42.857 0.00 0.00 0.00 5.19
2721 2845 2.378445 ACAACAACAACAACAAGGCC 57.622 45.000 0.00 0.00 0.00 5.19
2722 2846 3.063485 ACAACAACAACAACAACAAGGC 58.937 40.909 0.00 0.00 0.00 4.35
2723 2847 6.201044 TGTTAACAACAACAACAACAACAAGG 59.799 34.615 5.64 0.00 38.72 3.61
2724 2848 7.166628 TGTTAACAACAACAACAACAACAAG 57.833 32.000 5.64 0.00 38.72 3.16
2725 2849 7.254455 CCTTGTTAACAACAACAACAACAACAA 60.254 33.333 17.01 0.00 45.79 2.83
2726 2850 6.201044 CCTTGTTAACAACAACAACAACAACA 59.799 34.615 17.01 0.00 45.79 3.33
2727 2851 6.346999 CCCTTGTTAACAACAACAACAACAAC 60.347 38.462 17.01 0.00 45.79 3.32
2728 2852 5.696724 CCCTTGTTAACAACAACAACAACAA 59.303 36.000 17.01 0.00 45.79 2.83
2729 2853 5.010719 TCCCTTGTTAACAACAACAACAACA 59.989 36.000 17.01 0.00 45.79 3.33
2730 2854 5.471257 TCCCTTGTTAACAACAACAACAAC 58.529 37.500 17.01 0.00 45.79 3.32
2731 2855 5.244178 ACTCCCTTGTTAACAACAACAACAA 59.756 36.000 17.01 0.00 45.79 2.83
2732 2856 4.767928 ACTCCCTTGTTAACAACAACAACA 59.232 37.500 17.01 0.00 45.79 3.33
2733 2857 5.124936 AGACTCCCTTGTTAACAACAACAAC 59.875 40.000 17.01 7.98 45.79 3.32
2734 2858 5.258051 AGACTCCCTTGTTAACAACAACAA 58.742 37.500 17.01 0.00 45.79 2.83
2735 2859 4.850680 AGACTCCCTTGTTAACAACAACA 58.149 39.130 17.01 0.00 45.79 3.33
2736 2860 4.879545 TGAGACTCCCTTGTTAACAACAAC 59.120 41.667 17.01 6.13 45.79 3.32
2738 2862 4.764050 TGAGACTCCCTTGTTAACAACA 57.236 40.909 17.01 8.23 40.21 3.33
2739 2863 6.445357 TTTTGAGACTCCCTTGTTAACAAC 57.555 37.500 17.01 6.60 0.00 3.32
2740 2864 8.934023 ATATTTTGAGACTCCCTTGTTAACAA 57.066 30.769 19.53 19.53 0.00 2.83
2741 2865 8.934023 AATATTTTGAGACTCCCTTGTTAACA 57.066 30.769 3.59 3.59 0.00 2.41
2774 2898 1.032014 TGAGTTTTCAGGCTTGGTGC 58.968 50.000 0.00 0.00 41.94 5.01
2779 2903 5.595952 AGAAAGATTGTGAGTTTTCAGGCTT 59.404 36.000 0.00 0.00 32.98 4.35
2786 2910 6.576185 ACATGCAAGAAAGATTGTGAGTTTT 58.424 32.000 0.00 0.00 32.56 2.43
3535 3661 5.113383 TCGAACACAAAGCAGAAAAGTCTA 58.887 37.500 0.00 0.00 30.85 2.59
3555 3681 3.280295 CAGCTAGTAAAGGAGGACTCGA 58.720 50.000 0.00 0.00 0.00 4.04
3556 3682 3.018149 ACAGCTAGTAAAGGAGGACTCG 58.982 50.000 0.00 0.00 0.00 4.18
3731 3857 1.827789 CCTGTGTGTTGTGTGGGGG 60.828 63.158 0.00 0.00 0.00 5.40
3860 3991 2.202479 GTCGCCCGAGCAAAATGC 60.202 61.111 0.00 0.00 45.46 3.56
3884 4017 4.664150 TGAACAAAACATCCACTTTCCC 57.336 40.909 0.00 0.00 0.00 3.97
3899 4032 3.632643 TCTGCATCCAGCTATGAACAA 57.367 42.857 0.43 0.00 45.94 2.83
3976 4109 3.550437 ATCAAGAGGAATCAAGGACCG 57.450 47.619 0.00 0.00 0.00 4.79
3991 4124 4.460382 AGTCCACCACTGCAATTAATCAAG 59.540 41.667 0.00 0.00 32.26 3.02
3992 4125 4.406456 AGTCCACCACTGCAATTAATCAA 58.594 39.130 0.00 0.00 32.26 2.57
4126 4263 4.527157 CCGGTCGTAGGACGTCGC 62.527 72.222 9.92 2.53 44.39 5.19
4132 4269 1.466025 AAACTGTGCCGGTCGTAGGA 61.466 55.000 1.90 0.00 0.00 2.94
4135 4272 4.347096 CAAACTGTGCCGGTCGTA 57.653 55.556 1.90 0.00 0.00 3.43
4150 4287 2.574006 ATTCTTCTGCACTGGAGCAA 57.426 45.000 0.00 0.00 45.13 3.91
4205 4342 1.141053 GTATCAAGCCATCGACCCCTT 59.859 52.381 0.00 0.00 0.00 3.95
4208 4345 0.387929 TCGTATCAAGCCATCGACCC 59.612 55.000 0.00 0.00 0.00 4.46
4211 4348 2.543848 GCAAATCGTATCAAGCCATCGA 59.456 45.455 0.00 0.00 35.14 3.59
4219 4356 4.699735 ACCAGATGTTGCAAATCGTATCAA 59.300 37.500 0.00 0.00 0.00 2.57
4220 4357 4.094739 CACCAGATGTTGCAAATCGTATCA 59.905 41.667 0.00 0.00 0.00 2.15
4221 4358 4.591202 CACCAGATGTTGCAAATCGTATC 58.409 43.478 0.00 0.95 0.00 2.24
4222 4359 3.181497 GCACCAGATGTTGCAAATCGTAT 60.181 43.478 0.00 0.00 0.00 3.06
4223 4360 2.161410 GCACCAGATGTTGCAAATCGTA 59.839 45.455 0.00 0.00 0.00 3.43
4224 4361 1.068333 GCACCAGATGTTGCAAATCGT 60.068 47.619 0.00 0.00 0.00 3.73
4225 4362 1.621107 GCACCAGATGTTGCAAATCG 58.379 50.000 0.00 4.16 0.00 3.34
4226 4363 1.199789 TCGCACCAGATGTTGCAAATC 59.800 47.619 0.00 7.09 0.00 2.17
4249 4386 0.813610 CAACACGACTTGGGACAGCA 60.814 55.000 0.00 0.00 42.39 4.41
4263 4408 4.755123 AGCTGTTACAATACAGACCAACAC 59.245 41.667 7.88 0.00 46.72 3.32
4277 4422 7.972277 CGATACTTTACTTTCCTAGCTGTTACA 59.028 37.037 0.00 0.00 0.00 2.41
4283 4428 5.127356 ACAGCGATACTTTACTTTCCTAGCT 59.873 40.000 0.00 0.00 0.00 3.32
4344 4489 6.980051 ATTTCTTGACTTCCACGGTATAAC 57.020 37.500 0.00 0.00 0.00 1.89
4370 4518 3.693085 CCAGGACATGTTGATTGGAAGAG 59.307 47.826 0.00 0.00 0.00 2.85
4426 4577 1.522580 GAGAGGCCGACTGATTGCC 60.523 63.158 10.06 0.00 45.70 4.52
4428 4579 1.809869 TCGAGAGGCCGACTGATTG 59.190 57.895 10.06 0.00 33.14 2.67
4439 4590 2.817258 AGTGAGAAGAACAGTCGAGAGG 59.183 50.000 0.00 0.00 0.00 3.69
4493 4646 7.394016 ACGATCCCATATGCATACATTAAAGA 58.606 34.615 8.99 0.11 37.74 2.52
4494 4647 7.550551 AGACGATCCCATATGCATACATTAAAG 59.449 37.037 8.99 2.04 37.74 1.85
4495 4648 7.394016 AGACGATCCCATATGCATACATTAAA 58.606 34.615 8.99 0.00 37.74 1.52
4496 4649 6.946340 AGACGATCCCATATGCATACATTAA 58.054 36.000 8.99 0.00 37.74 1.40
4497 4650 6.544928 AGACGATCCCATATGCATACATTA 57.455 37.500 8.99 0.00 37.74 1.90
4498 4651 5.423015 GAGACGATCCCATATGCATACATT 58.577 41.667 8.99 0.00 37.74 2.71
4499 4652 4.440663 CGAGACGATCCCATATGCATACAT 60.441 45.833 8.99 0.00 40.49 2.29
4500 4653 3.119495 CGAGACGATCCCATATGCATACA 60.119 47.826 8.99 0.00 0.00 2.29
4522 4675 1.539388 TGACGATGGCCAACATGAAAC 59.461 47.619 10.96 0.00 40.72 2.78
4523 4676 1.902938 TGACGATGGCCAACATGAAA 58.097 45.000 10.96 0.00 40.72 2.69
4524 4677 2.016318 GATGACGATGGCCAACATGAA 58.984 47.619 10.96 0.00 40.72 2.57
4525 4678 1.667236 GATGACGATGGCCAACATGA 58.333 50.000 10.96 0.00 40.72 3.07
4526 4679 0.664761 GGATGACGATGGCCAACATG 59.335 55.000 10.96 1.85 40.72 3.21
4539 4692 1.552337 TCTCCAGCTTCAGTGGATGAC 59.448 52.381 0.00 0.00 43.33 3.06
4708 4867 2.622064 AACGGATAGCCACAAGATCC 57.378 50.000 0.00 0.00 36.55 3.36
4731 4890 2.111878 GGATCGGTGCAGGATGGG 59.888 66.667 4.98 0.00 35.86 4.00
4734 4893 0.765903 ATGGAGGATCGGTGCAGGAT 60.766 55.000 0.00 0.00 34.37 3.24
4735 4894 0.982852 AATGGAGGATCGGTGCAGGA 60.983 55.000 0.00 0.00 34.37 3.86
4742 4901 1.431488 CGTGTGCAATGGAGGATCGG 61.431 60.000 0.00 0.00 34.37 4.18
4751 4910 2.668457 GGAGTACTCTTCGTGTGCAATG 59.332 50.000 21.88 0.00 0.00 2.82
4752 4911 2.299013 TGGAGTACTCTTCGTGTGCAAT 59.701 45.455 21.88 0.00 0.00 3.56
4753 4912 1.684450 TGGAGTACTCTTCGTGTGCAA 59.316 47.619 21.88 0.00 0.00 4.08
4757 4916 1.268899 CGGTTGGAGTACTCTTCGTGT 59.731 52.381 21.88 0.00 0.00 4.49
4759 4918 1.901591 TCGGTTGGAGTACTCTTCGT 58.098 50.000 21.88 0.00 0.00 3.85
4760 4919 4.275196 TCATATCGGTTGGAGTACTCTTCG 59.725 45.833 21.88 18.22 0.00 3.79
4761 4920 5.769484 TCATATCGGTTGGAGTACTCTTC 57.231 43.478 21.88 12.13 0.00 2.87
4763 4922 4.767928 GGATCATATCGGTTGGAGTACTCT 59.232 45.833 21.88 3.41 0.00 3.24
4765 4924 3.506455 CGGATCATATCGGTTGGAGTACT 59.494 47.826 0.00 0.00 0.00 2.73
4767 4926 3.254903 CACGGATCATATCGGTTGGAGTA 59.745 47.826 0.00 0.00 40.32 2.59
4768 4927 2.035961 CACGGATCATATCGGTTGGAGT 59.964 50.000 0.00 0.00 40.32 3.85
4771 4930 1.070134 ACCACGGATCATATCGGTTGG 59.930 52.381 0.00 11.13 40.32 3.77
4773 4932 2.169769 ACAACCACGGATCATATCGGTT 59.830 45.455 0.00 0.00 40.32 4.44
4774 4933 1.760613 ACAACCACGGATCATATCGGT 59.239 47.619 0.00 0.00 42.62 4.69
4775 4934 2.035961 AGACAACCACGGATCATATCGG 59.964 50.000 0.00 0.00 35.90 4.18
4776 4935 3.052745 CAGACAACCACGGATCATATCG 58.947 50.000 0.00 0.00 0.00 2.92
4834 5040 3.255642 GTGCATAGAAAAACAAGCTCCCA 59.744 43.478 0.00 0.00 0.00 4.37
5103 5319 0.298707 CCGATTGATCAGTCGTTGCG 59.701 55.000 30.81 16.85 38.63 4.85
5107 5323 0.100682 CCGTCCGATTGATCAGTCGT 59.899 55.000 30.81 5.88 38.63 4.34
5133 5349 2.897350 GGCGCTGGGAATCGGAAG 60.897 66.667 7.64 0.00 0.00 3.46
5134 5350 3.261039 TTGGCGCTGGGAATCGGAA 62.261 57.895 7.64 0.00 0.00 4.30
5153 5369 2.182842 ATTTCATCAGCTCGCGGGC 61.183 57.895 26.87 26.87 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.