Multiple sequence alignment - TraesCS1D01G301600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G301600 chr1D 100.000 3154 0 0 1 3154 399324474 399327627 0.000000e+00 5825.0
1 TraesCS1D01G301600 chr1B 90.452 1393 70 29 685 2032 535689554 535690928 0.000000e+00 1777.0
2 TraesCS1D01G301600 chr1B 84.810 316 29 12 2032 2346 535690988 535691285 1.840000e-77 300.0
3 TraesCS1D01G301600 chr1A 88.273 1262 74 41 626 1845 496122109 496123338 0.000000e+00 1443.0
4 TraesCS1D01G301600 chr1A 95.642 436 17 2 1 435 496121406 496121840 0.000000e+00 699.0
5 TraesCS1D01G301600 chr1A 89.583 432 27 11 1919 2346 496123459 496123876 1.670000e-147 532.0
6 TraesCS1D01G301600 chr1A 88.136 59 1 3 2419 2471 496141728 496141786 7.300000e-07 65.8
7 TraesCS1D01G301600 chr4D 86.448 487 49 10 2678 3154 36481924 36481445 4.660000e-143 518.0
8 TraesCS1D01G301600 chr4A 85.300 483 51 16 2678 3154 90046738 90047206 6.120000e-132 481.0
9 TraesCS1D01G301600 chr4A 83.824 68 7 3 19 83 722842996 722843062 9.450000e-06 62.1
10 TraesCS1D01G301600 chr6B 85.093 483 57 9 2678 3154 184172894 184173367 2.200000e-131 479.0
11 TraesCS1D01G301600 chr6B 85.714 462 47 11 2701 3154 89202309 89202759 1.320000e-128 470.0
12 TraesCS1D01G301600 chr6B 100.000 39 0 0 544 582 115103833 115103871 4.360000e-09 73.1
13 TraesCS1D01G301600 chr6B 97.436 39 1 0 544 582 115104658 115104696 2.030000e-07 67.6
14 TraesCS1D01G301600 chr6B 97.436 39 1 0 544 582 115295228 115295266 2.030000e-07 67.6
15 TraesCS1D01G301600 chr6B 94.737 38 2 0 545 582 115086888 115086925 3.400000e-05 60.2
16 TraesCS1D01G301600 chr3B 85.155 485 53 12 2680 3154 64714548 64714073 2.200000e-131 479.0
17 TraesCS1D01G301600 chr5B 84.394 487 57 16 2678 3154 617040141 617040618 7.970000e-126 460.0
18 TraesCS1D01G301600 chr2D 83.851 483 65 11 2678 3154 196887228 196887703 6.210000e-122 448.0
19 TraesCS1D01G301600 chr2D 90.698 43 1 3 2648 2688 645841285 645841244 2.000000e-03 54.7
20 TraesCS1D01G301600 chr3D 83.778 487 58 11 2678 3153 41682300 41681824 2.890000e-120 442.0
21 TraesCS1D01G301600 chr7D 83.436 489 59 15 2678 3154 60340121 60340599 4.830000e-118 435.0
22 TraesCS1D01G301600 chr7D 78.302 106 21 2 19 123 13715470 13715366 2.030000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G301600 chr1D 399324474 399327627 3153 False 5825.000000 5825 100.000 1 3154 1 chr1D.!!$F1 3153
1 TraesCS1D01G301600 chr1B 535689554 535691285 1731 False 1038.500000 1777 87.631 685 2346 2 chr1B.!!$F1 1661
2 TraesCS1D01G301600 chr1A 496121406 496123876 2470 False 891.333333 1443 91.166 1 2346 3 chr1A.!!$F2 2345

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
918 1040 0.172578 TTGCGAGGTGGTAGATCACG 59.827 55.0 0.0 0.0 38.46 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2573 2868 0.045778 AGGGTAGTACCAATGCCCCT 59.954 55.0 20.97 4.08 43.21 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
267 269 2.820059 ATCAGCAGACGAGTGTGAAA 57.180 45.000 4.48 0.00 0.00 2.69
275 277 5.527582 AGCAGACGAGTGTGAAAATAACTTT 59.472 36.000 4.48 0.00 0.00 2.66
315 317 9.865321 TTACTGATAGTTTGGAGTGTGTTATAC 57.135 33.333 0.00 0.00 0.00 1.47
324 326 9.109393 GTTTGGAGTGTGTTATACATGTATCAT 57.891 33.333 21.49 3.11 42.24 2.45
404 406 4.795268 GGCAGTAGTTTAAAGCCAAGAAC 58.205 43.478 9.83 0.00 44.59 3.01
423 425 2.206750 ACGAACTCGCTTTTGTTAGCA 58.793 42.857 0.00 0.00 44.43 3.49
424 426 2.610374 ACGAACTCGCTTTTGTTAGCAA 59.390 40.909 0.00 0.00 44.43 3.91
425 427 3.064271 ACGAACTCGCTTTTGTTAGCAAA 59.936 39.130 0.00 0.00 44.43 3.68
426 428 4.219033 CGAACTCGCTTTTGTTAGCAAAT 58.781 39.130 5.52 0.00 43.26 2.32
427 429 5.049954 ACGAACTCGCTTTTGTTAGCAAATA 60.050 36.000 5.52 0.00 42.40 1.40
428 430 5.849081 CGAACTCGCTTTTGTTAGCAAATAA 59.151 36.000 5.52 0.00 43.26 1.40
429 431 6.523201 CGAACTCGCTTTTGTTAGCAAATAAT 59.477 34.615 5.52 0.00 43.26 1.28
430 432 7.690637 CGAACTCGCTTTTGTTAGCAAATAATA 59.309 33.333 5.52 0.00 43.26 0.98
431 433 8.895932 AACTCGCTTTTGTTAGCAAATAATAG 57.104 30.769 5.52 1.80 43.26 1.73
432 434 8.263940 ACTCGCTTTTGTTAGCAAATAATAGA 57.736 30.769 5.52 1.96 43.26 1.98
433 435 8.893727 ACTCGCTTTTGTTAGCAAATAATAGAT 58.106 29.630 5.52 0.00 43.26 1.98
434 436 9.722056 CTCGCTTTTGTTAGCAAATAATAGATT 57.278 29.630 5.52 0.00 43.26 2.40
484 557 3.980646 ACAAGCATTAACGAACAGCAA 57.019 38.095 0.00 0.00 0.00 3.91
497 570 4.351054 AGCAAGAACCGGGCTGGG 62.351 66.667 18.49 5.37 44.64 4.45
507 580 1.450312 CGGGCTGGGCTTGAGTAAG 60.450 63.158 0.00 0.00 36.97 2.34
523 596 3.084786 AGTAAGCCTTGTTGAATCAGGC 58.915 45.455 9.03 9.03 45.30 4.85
529 602 3.334691 CCTTGTTGAATCAGGCGTAAGA 58.665 45.455 0.00 0.00 43.02 2.10
533 606 2.742053 GTTGAATCAGGCGTAAGAGCAA 59.258 45.455 0.00 0.00 43.02 3.91
534 607 3.052455 TGAATCAGGCGTAAGAGCAAA 57.948 42.857 0.00 0.00 43.02 3.68
553 626 0.322906 AGGGCCTGCTAAAGTTGAGC 60.323 55.000 4.50 5.13 40.53 4.26
556 629 1.065418 GGCCTGCTAAAGTTGAGCCTA 60.065 52.381 9.87 0.00 39.30 3.93
577 650 0.533951 GGCTTTCTTTCATGGGCCTG 59.466 55.000 4.53 0.24 36.96 4.85
603 676 3.618690 GTGGGCACTACAGAATCTTCT 57.381 47.619 0.00 0.00 40.52 2.85
604 677 3.526534 GTGGGCACTACAGAATCTTCTC 58.473 50.000 0.00 0.00 40.52 2.87
605 678 2.501723 TGGGCACTACAGAATCTTCTCC 59.498 50.000 0.00 0.00 34.74 3.71
606 679 2.482142 GGGCACTACAGAATCTTCTCCG 60.482 54.545 0.00 0.00 34.74 4.63
608 681 3.182967 GCACTACAGAATCTTCTCCGTG 58.817 50.000 7.74 7.74 34.74 4.94
611 684 5.230942 CACTACAGAATCTTCTCCGTGTTT 58.769 41.667 0.00 0.00 34.74 2.83
612 685 5.346281 CACTACAGAATCTTCTCCGTGTTTC 59.654 44.000 0.00 0.00 34.74 2.78
614 687 3.071023 ACAGAATCTTCTCCGTGTTTCCA 59.929 43.478 0.00 0.00 34.74 3.53
616 689 4.515191 CAGAATCTTCTCCGTGTTTCCAAA 59.485 41.667 0.00 0.00 34.74 3.28
617 690 5.008613 CAGAATCTTCTCCGTGTTTCCAAAA 59.991 40.000 0.00 0.00 34.74 2.44
646 752 3.368571 GAGGGGCTGCAGTGCAAC 61.369 66.667 20.22 15.08 38.41 4.17
672 778 1.138883 GCATGCATGGTCAGTGCTG 59.861 57.895 27.34 0.13 42.92 4.41
725 840 1.225704 GAATGCAGGGAGGACCAGG 59.774 63.158 0.00 0.00 43.89 4.45
736 851 1.006639 GAGGACCAGGTCTCTCCTCTT 59.993 57.143 19.57 0.00 46.24 2.85
738 853 1.552792 GGACCAGGTCTCTCCTCTTTG 59.447 57.143 19.57 0.00 46.24 2.77
741 856 0.979665 CAGGTCTCTCCTCTTTGCCA 59.020 55.000 0.00 0.00 46.24 4.92
749 865 2.520458 CTCTTTGCCACCACCCCA 59.480 61.111 0.00 0.00 0.00 4.96
751 867 3.294493 CTTTGCCACCACCCCACG 61.294 66.667 0.00 0.00 0.00 4.94
777 893 1.519455 GGGATCCGAACTCTGCGTG 60.519 63.158 5.45 0.00 0.00 5.34
782 898 2.651361 CGAACTCTGCGTGGGTCT 59.349 61.111 0.00 0.00 0.00 3.85
908 1030 0.871722 TTTGATCGGTTTGCGAGGTG 59.128 50.000 0.00 0.00 0.00 4.00
910 1032 1.375523 GATCGGTTTGCGAGGTGGT 60.376 57.895 0.00 0.00 0.00 4.16
917 1039 2.000447 GTTTGCGAGGTGGTAGATCAC 59.000 52.381 0.00 0.00 36.95 3.06
918 1040 0.172578 TTGCGAGGTGGTAGATCACG 59.827 55.000 0.00 0.00 38.46 4.35
929 1051 4.643733 GATCACGCAGAGATCCCG 57.356 61.111 0.00 0.00 46.39 5.14
930 1052 2.033793 GATCACGCAGAGATCCCGA 58.966 57.895 0.00 0.00 46.39 5.14
931 1053 0.600557 GATCACGCAGAGATCCCGAT 59.399 55.000 0.00 0.00 46.39 4.18
934 1056 2.256764 CGCAGAGATCCCGATCCG 59.743 66.667 1.00 0.00 38.58 4.18
936 1058 1.583986 GCAGAGATCCCGATCCGAG 59.416 63.158 1.00 0.00 38.58 4.63
939 1061 0.608035 AGAGATCCCGATCCGAGAGC 60.608 60.000 1.00 0.00 38.58 4.09
942 1064 0.605589 GATCCCGATCCGAGAGCAAT 59.394 55.000 0.00 0.00 31.76 3.56
1134 1265 3.416119 TCTATCACCGTGTCAATCGAC 57.584 47.619 0.00 0.00 42.93 4.20
1148 1279 0.316522 ATCGACCGATCCTCTGCATG 59.683 55.000 0.00 0.00 0.00 4.06
1253 1401 1.216710 CTGGTGGAGTCGGAGAAGC 59.783 63.158 0.00 0.00 39.69 3.86
1321 1469 1.367659 GCAGGAAGATGTGAGTGAGC 58.632 55.000 0.00 0.00 0.00 4.26
1350 1498 3.641031 TCGTCGATCGACATGCATT 57.359 47.368 38.62 0.00 44.77 3.56
1358 1506 4.457257 TCGATCGACATGCATTATCTCTCT 59.543 41.667 15.15 0.00 0.00 3.10
1579 1745 2.545952 CGTGCAGGTGAGTCAGTTAACT 60.546 50.000 1.12 1.12 0.00 2.24
1582 1748 3.118408 TGCAGGTGAGTCAGTTAACTGTT 60.118 43.478 29.83 21.01 44.12 3.16
1584 1750 4.442706 CAGGTGAGTCAGTTAACTGTTGT 58.557 43.478 29.83 17.97 44.12 3.32
1588 1767 5.353123 GGTGAGTCAGTTAACTGTTGTTTCA 59.647 40.000 29.83 22.61 44.12 2.69
1598 1777 9.832445 AGTTAACTGTTGTTTCAGAAGAAGATA 57.168 29.630 7.48 0.00 38.63 1.98
1600 1779 6.771188 ACTGTTGTTTCAGAAGAAGATACG 57.229 37.500 0.65 0.00 38.63 3.06
1852 2035 0.608640 CCCGCCTGGTATACTCCATC 59.391 60.000 2.25 0.00 36.84 3.51
1853 2036 0.608640 CCGCCTGGTATACTCCATCC 59.391 60.000 2.25 0.00 36.84 3.51
1854 2037 1.338107 CGCCTGGTATACTCCATCCA 58.662 55.000 2.25 0.00 36.84 3.41
1855 2038 1.902508 CGCCTGGTATACTCCATCCAT 59.097 52.381 2.25 0.00 36.84 3.41
1882 2065 5.412594 ACATTACAATGTCGATCAGTTGCTT 59.587 36.000 1.70 0.00 46.10 3.91
1883 2066 3.818961 ACAATGTCGATCAGTTGCTTG 57.181 42.857 0.00 0.00 0.00 4.01
1887 2070 0.445436 GTCGATCAGTTGCTTGCTGG 59.555 55.000 0.00 0.00 34.89 4.85
1888 2071 0.035317 TCGATCAGTTGCTTGCTGGT 59.965 50.000 0.00 0.00 34.89 4.00
1926 2156 2.680339 GTTGAGTTTGGATAGCTCTGGC 59.320 50.000 0.00 0.00 39.06 4.85
2038 2328 5.107182 CCTGAGGTACGTGATACTACATACG 60.107 48.000 0.00 0.00 41.86 3.06
2051 2341 1.225827 CATACGTGCTGCGCAGTTG 60.226 57.895 35.80 26.77 46.11 3.16
2052 2342 1.667830 ATACGTGCTGCGCAGTTGT 60.668 52.632 35.80 30.23 46.11 3.32
2070 2361 4.636206 AGTTGTTTCCTTAATCCTCATCGC 59.364 41.667 0.00 0.00 0.00 4.58
2100 2391 4.144731 GCGTTTGAAATGTTTCTCGTCTTG 59.855 41.667 6.99 0.00 38.02 3.02
2134 2425 4.109050 CAGATCAGGAAGAAACTCTACGC 58.891 47.826 0.00 0.00 0.00 4.42
2141 2432 2.645730 AGAAACTCTACGCTCAGCAG 57.354 50.000 0.00 0.00 0.00 4.24
2151 2442 0.952497 CGCTCAGCAGGTGTCACAAT 60.952 55.000 5.12 0.00 0.00 2.71
2152 2443 1.672737 CGCTCAGCAGGTGTCACAATA 60.673 52.381 5.12 0.00 0.00 1.90
2153 2444 2.426522 GCTCAGCAGGTGTCACAATAA 58.573 47.619 5.12 0.00 0.00 1.40
2190 2481 2.594013 TGCGCTGCCATTGTGTGA 60.594 55.556 9.73 0.00 0.00 3.58
2219 2514 4.846779 TCTTGAATAAAGCACCACAACC 57.153 40.909 0.00 0.00 35.69 3.77
2222 2517 0.601057 AATAAAGCACCACAACCGGC 59.399 50.000 0.00 0.00 0.00 6.13
2300 2595 6.338146 GCTCATCGCCAACAATATATACCTA 58.662 40.000 0.00 0.00 0.00 3.08
2302 2597 6.636705 TCATCGCCAACAATATATACCTACC 58.363 40.000 0.00 0.00 0.00 3.18
2303 2598 6.439375 TCATCGCCAACAATATATACCTACCT 59.561 38.462 0.00 0.00 0.00 3.08
2304 2599 6.032956 TCGCCAACAATATATACCTACCTG 57.967 41.667 0.00 0.00 0.00 4.00
2305 2600 4.630069 CGCCAACAATATATACCTACCTGC 59.370 45.833 0.00 0.00 0.00 4.85
2306 2601 5.556915 GCCAACAATATATACCTACCTGCA 58.443 41.667 0.00 0.00 0.00 4.41
2346 2641 8.094548 TGCATCTGTAAGTTGTAACTGAGTATT 58.905 33.333 0.00 0.00 39.66 1.89
2347 2642 8.936864 GCATCTGTAAGTTGTAACTGAGTATTT 58.063 33.333 0.00 0.00 39.66 1.40
2373 2668 2.335316 TTTTGCGGGTGTAACTGAGT 57.665 45.000 0.00 0.00 36.74 3.41
2374 2669 1.588674 TTTGCGGGTGTAACTGAGTG 58.411 50.000 0.00 0.00 36.74 3.51
2375 2670 0.466543 TTGCGGGTGTAACTGAGTGT 59.533 50.000 0.00 0.00 36.74 3.55
2376 2671 1.330234 TGCGGGTGTAACTGAGTGTA 58.670 50.000 0.00 0.00 36.74 2.90
2377 2672 1.897133 TGCGGGTGTAACTGAGTGTAT 59.103 47.619 0.00 0.00 36.74 2.29
2378 2673 2.300723 TGCGGGTGTAACTGAGTGTATT 59.699 45.455 0.00 0.00 36.74 1.89
2379 2674 3.510753 TGCGGGTGTAACTGAGTGTATTA 59.489 43.478 0.00 0.00 36.74 0.98
2380 2675 3.861689 GCGGGTGTAACTGAGTGTATTAC 59.138 47.826 0.00 0.00 36.74 1.89
2381 2676 4.427312 CGGGTGTAACTGAGTGTATTACC 58.573 47.826 0.00 0.00 36.74 2.85
2382 2677 4.159135 CGGGTGTAACTGAGTGTATTACCT 59.841 45.833 0.00 0.00 36.74 3.08
2383 2678 5.658468 GGGTGTAACTGAGTGTATTACCTC 58.342 45.833 0.00 5.74 36.74 3.85
2384 2679 5.338365 GGTGTAACTGAGTGTATTACCTCG 58.662 45.833 0.00 5.78 36.74 4.63
2385 2680 5.338365 GTGTAACTGAGTGTATTACCTCGG 58.662 45.833 14.57 14.57 0.00 4.63
2386 2681 5.012239 TGTAACTGAGTGTATTACCTCGGT 58.988 41.667 15.45 15.45 37.06 4.69
2387 2682 4.451629 AACTGAGTGTATTACCTCGGTG 57.548 45.455 19.13 10.23 35.82 4.94
2388 2683 3.428532 ACTGAGTGTATTACCTCGGTGT 58.571 45.455 18.33 10.20 34.54 4.16
2389 2684 3.442977 ACTGAGTGTATTACCTCGGTGTC 59.557 47.826 18.33 0.00 34.54 3.67
2390 2685 3.423749 TGAGTGTATTACCTCGGTGTCA 58.576 45.455 0.00 0.00 0.00 3.58
2391 2686 3.192001 TGAGTGTATTACCTCGGTGTCAC 59.808 47.826 0.00 0.00 0.00 3.67
2392 2687 2.494870 AGTGTATTACCTCGGTGTCACC 59.505 50.000 12.40 12.40 34.05 4.02
2393 2688 2.494870 GTGTATTACCTCGGTGTCACCT 59.505 50.000 19.82 3.60 35.66 4.00
2394 2689 3.696051 GTGTATTACCTCGGTGTCACCTA 59.304 47.826 19.82 8.28 35.66 3.08
2395 2690 3.949754 TGTATTACCTCGGTGTCACCTAG 59.050 47.826 19.82 17.39 35.66 3.02
2396 2691 2.592102 TTACCTCGGTGTCACCTAGT 57.408 50.000 19.82 15.19 35.66 2.57
2397 2692 3.719268 TTACCTCGGTGTCACCTAGTA 57.281 47.619 19.82 14.27 35.66 1.82
2398 2693 2.822707 ACCTCGGTGTCACCTAGTAT 57.177 50.000 19.82 6.14 35.66 2.12
2399 2694 3.097342 ACCTCGGTGTCACCTAGTATT 57.903 47.619 19.82 2.58 35.66 1.89
2400 2695 2.758979 ACCTCGGTGTCACCTAGTATTG 59.241 50.000 19.82 7.98 35.66 1.90
2401 2696 2.758979 CCTCGGTGTCACCTAGTATTGT 59.241 50.000 19.82 0.00 35.66 2.71
2402 2697 3.949754 CCTCGGTGTCACCTAGTATTGTA 59.050 47.826 19.82 0.00 35.66 2.41
2403 2698 4.201990 CCTCGGTGTCACCTAGTATTGTAC 60.202 50.000 19.82 0.00 35.66 2.90
2404 2699 4.592942 TCGGTGTCACCTAGTATTGTACT 58.407 43.478 19.82 0.00 35.66 2.73
2405 2700 4.397103 TCGGTGTCACCTAGTATTGTACTG 59.603 45.833 19.82 0.00 35.10 2.74
2406 2701 4.157289 CGGTGTCACCTAGTATTGTACTGT 59.843 45.833 19.82 0.00 35.10 3.55
2407 2702 5.355071 CGGTGTCACCTAGTATTGTACTGTA 59.645 44.000 19.82 0.00 35.10 2.74
2408 2703 6.558909 GGTGTCACCTAGTATTGTACTGTAC 58.441 44.000 15.22 10.98 39.81 2.90
2409 2704 6.151648 GGTGTCACCTAGTATTGTACTGTACA 59.848 42.308 16.26 16.26 39.81 2.90
2410 2705 7.147949 GGTGTCACCTAGTATTGTACTGTACAT 60.148 40.741 20.31 12.98 39.81 2.29
2411 2706 8.896744 GTGTCACCTAGTATTGTACTGTACATA 58.103 37.037 20.31 12.07 39.81 2.29
2412 2707 9.117183 TGTCACCTAGTATTGTACTGTACATAG 57.883 37.037 20.31 17.12 39.81 2.23
2413 2708 9.118300 GTCACCTAGTATTGTACTGTACATAGT 57.882 37.037 20.31 17.29 39.81 2.12
2416 2711 9.282569 ACCTAGTATTGTACTGTACATAGTAGC 57.717 37.037 20.31 8.76 39.81 3.58
2417 2712 9.281371 CCTAGTATTGTACTGTACATAGTAGCA 57.719 37.037 20.31 5.21 39.81 3.49
2419 2714 7.938715 AGTATTGTACTGTACATAGTAGCACC 58.061 38.462 20.31 4.43 38.68 5.01
2420 2715 6.785337 ATTGTACTGTACATAGTAGCACCA 57.215 37.500 20.31 3.12 38.68 4.17
2421 2716 5.830000 TGTACTGTACATAGTAGCACCAG 57.170 43.478 16.26 0.00 34.05 4.00
2422 2717 3.802948 ACTGTACATAGTAGCACCAGC 57.197 47.619 0.00 0.00 42.56 4.85
2423 2718 3.096852 ACTGTACATAGTAGCACCAGCA 58.903 45.455 0.00 0.00 45.49 4.41
2424 2719 3.513912 ACTGTACATAGTAGCACCAGCAA 59.486 43.478 0.00 0.00 45.49 3.91
2425 2720 4.020573 ACTGTACATAGTAGCACCAGCAAA 60.021 41.667 0.00 0.00 45.49 3.68
2426 2721 4.503910 TGTACATAGTAGCACCAGCAAAG 58.496 43.478 0.00 0.00 45.49 2.77
2427 2722 3.981071 ACATAGTAGCACCAGCAAAGA 57.019 42.857 0.00 0.00 45.49 2.52
2428 2723 3.600388 ACATAGTAGCACCAGCAAAGAC 58.400 45.455 0.00 0.00 45.49 3.01
2429 2724 2.762535 TAGTAGCACCAGCAAAGACC 57.237 50.000 0.00 0.00 45.49 3.85
2430 2725 0.764890 AGTAGCACCAGCAAAGACCA 59.235 50.000 0.00 0.00 45.49 4.02
2431 2726 1.352352 AGTAGCACCAGCAAAGACCAT 59.648 47.619 0.00 0.00 45.49 3.55
2432 2727 1.470098 GTAGCACCAGCAAAGACCATG 59.530 52.381 0.00 0.00 45.49 3.66
2433 2728 0.111061 AGCACCAGCAAAGACCATGA 59.889 50.000 0.00 0.00 45.49 3.07
2434 2729 0.961019 GCACCAGCAAAGACCATGAA 59.039 50.000 0.00 0.00 41.58 2.57
2435 2730 1.340889 GCACCAGCAAAGACCATGAAA 59.659 47.619 0.00 0.00 41.58 2.69
2436 2731 2.608752 GCACCAGCAAAGACCATGAAAG 60.609 50.000 0.00 0.00 41.58 2.62
2437 2732 2.029649 CACCAGCAAAGACCATGAAAGG 60.030 50.000 0.00 0.00 0.00 3.11
2438 2733 2.242043 CCAGCAAAGACCATGAAAGGT 58.758 47.619 0.00 0.00 46.82 3.50
2439 2734 2.629617 CCAGCAAAGACCATGAAAGGTT 59.370 45.455 0.00 0.00 43.38 3.50
2440 2735 3.070015 CCAGCAAAGACCATGAAAGGTTT 59.930 43.478 0.00 0.00 43.38 3.27
2441 2736 4.443315 CCAGCAAAGACCATGAAAGGTTTT 60.443 41.667 0.00 0.00 43.38 2.43
2442 2737 4.746611 CAGCAAAGACCATGAAAGGTTTTC 59.253 41.667 0.00 0.00 43.38 2.29
2443 2738 3.735746 GCAAAGACCATGAAAGGTTTTCG 59.264 43.478 0.00 0.00 43.38 3.46
2444 2739 4.736464 GCAAAGACCATGAAAGGTTTTCGT 60.736 41.667 0.00 0.00 43.38 3.85
2445 2740 5.348164 CAAAGACCATGAAAGGTTTTCGTT 58.652 37.500 0.00 0.00 43.38 3.85
2446 2741 4.830826 AGACCATGAAAGGTTTTCGTTC 57.169 40.909 0.00 0.00 43.38 3.95
2447 2742 3.250040 AGACCATGAAAGGTTTTCGTTCG 59.750 43.478 0.00 0.00 43.38 3.95
2448 2743 3.207778 ACCATGAAAGGTTTTCGTTCGA 58.792 40.909 0.00 0.00 39.34 3.71
2449 2744 3.628487 ACCATGAAAGGTTTTCGTTCGAA 59.372 39.130 3.47 3.47 39.34 3.71
2450 2745 4.096682 ACCATGAAAGGTTTTCGTTCGAAA 59.903 37.500 14.89 14.89 39.34 3.46
2451 2746 5.038033 CCATGAAAGGTTTTCGTTCGAAAA 58.962 37.500 23.07 23.07 40.45 2.29
2452 2747 5.517054 CCATGAAAGGTTTTCGTTCGAAAAA 59.483 36.000 26.68 15.21 43.06 1.94
2469 2764 3.391506 AAAAAGAAACCATGAGGCAGC 57.608 42.857 0.00 0.00 39.06 5.25
2470 2765 1.999648 AAAGAAACCATGAGGCAGCA 58.000 45.000 0.00 0.00 39.06 4.41
2471 2766 1.999648 AAGAAACCATGAGGCAGCAA 58.000 45.000 0.00 0.00 39.06 3.91
2472 2767 1.999648 AGAAACCATGAGGCAGCAAA 58.000 45.000 0.00 0.00 39.06 3.68
2473 2768 2.318908 AGAAACCATGAGGCAGCAAAA 58.681 42.857 0.00 0.00 39.06 2.44
2474 2769 2.298163 AGAAACCATGAGGCAGCAAAAG 59.702 45.455 0.00 0.00 39.06 2.27
2475 2770 1.999648 AACCATGAGGCAGCAAAAGA 58.000 45.000 0.00 0.00 39.06 2.52
2476 2771 1.999648 ACCATGAGGCAGCAAAAGAA 58.000 45.000 0.00 0.00 39.06 2.52
2477 2772 2.318908 ACCATGAGGCAGCAAAAGAAA 58.681 42.857 0.00 0.00 39.06 2.52
2478 2773 2.298163 ACCATGAGGCAGCAAAAGAAAG 59.702 45.455 0.00 0.00 39.06 2.62
2479 2774 2.559668 CCATGAGGCAGCAAAAGAAAGA 59.440 45.455 0.00 0.00 0.00 2.52
2480 2775 3.006110 CCATGAGGCAGCAAAAGAAAGAA 59.994 43.478 0.00 0.00 0.00 2.52
2481 2776 4.501915 CCATGAGGCAGCAAAAGAAAGAAA 60.502 41.667 0.00 0.00 0.00 2.52
2482 2777 4.734398 TGAGGCAGCAAAAGAAAGAAAA 57.266 36.364 0.00 0.00 0.00 2.29
2483 2778 5.280654 TGAGGCAGCAAAAGAAAGAAAAT 57.719 34.783 0.00 0.00 0.00 1.82
2484 2779 6.403866 TGAGGCAGCAAAAGAAAGAAAATA 57.596 33.333 0.00 0.00 0.00 1.40
2485 2780 6.815089 TGAGGCAGCAAAAGAAAGAAAATAA 58.185 32.000 0.00 0.00 0.00 1.40
2486 2781 7.271511 TGAGGCAGCAAAAGAAAGAAAATAAA 58.728 30.769 0.00 0.00 0.00 1.40
2487 2782 7.768120 TGAGGCAGCAAAAGAAAGAAAATAAAA 59.232 29.630 0.00 0.00 0.00 1.52
2488 2783 8.504812 AGGCAGCAAAAGAAAGAAAATAAAAA 57.495 26.923 0.00 0.00 0.00 1.94
2523 2818 9.709387 AAAAATTAGTAGCATTGGTATTACCCT 57.291 29.630 10.37 2.91 37.50 4.34
2524 2819 9.709387 AAAATTAGTAGCATTGGTATTACCCTT 57.291 29.630 10.37 0.00 37.50 3.95
2525 2820 9.709387 AAATTAGTAGCATTGGTATTACCCTTT 57.291 29.630 10.37 0.00 37.50 3.11
2526 2821 8.919777 ATTAGTAGCATTGGTATTACCCTTTC 57.080 34.615 10.37 0.00 37.50 2.62
2527 2822 6.321821 AGTAGCATTGGTATTACCCTTTCA 57.678 37.500 10.37 0.00 37.50 2.69
2528 2823 6.727394 AGTAGCATTGGTATTACCCTTTCAA 58.273 36.000 10.37 0.00 37.50 2.69
2529 2824 7.179269 AGTAGCATTGGTATTACCCTTTCAAA 58.821 34.615 10.37 0.00 37.50 2.69
2530 2825 6.926630 AGCATTGGTATTACCCTTTCAAAA 57.073 33.333 10.37 0.00 37.50 2.44
2531 2826 6.935167 AGCATTGGTATTACCCTTTCAAAAG 58.065 36.000 10.37 0.00 37.50 2.27
2532 2827 6.723977 AGCATTGGTATTACCCTTTCAAAAGA 59.276 34.615 10.37 0.00 37.50 2.52
2533 2828 7.234577 AGCATTGGTATTACCCTTTCAAAAGAA 59.765 33.333 10.37 0.00 37.50 2.52
2534 2829 7.875554 GCATTGGTATTACCCTTTCAAAAGAAA 59.124 33.333 10.37 0.00 37.50 2.52
2535 2830 9.423061 CATTGGTATTACCCTTTCAAAAGAAAG 57.577 33.333 10.37 10.24 37.50 2.62
2536 2831 8.770010 TTGGTATTACCCTTTCAAAAGAAAGA 57.230 30.769 17.03 0.68 38.96 2.52
2537 2832 8.770010 TGGTATTACCCTTTCAAAAGAAAGAA 57.230 30.769 17.03 6.36 38.96 2.52
2538 2833 9.203163 TGGTATTACCCTTTCAAAAGAAAGAAA 57.797 29.630 17.03 9.84 38.96 2.52
2579 2874 8.903059 TTCTAAGGAAAAATAAATTAGGGGCA 57.097 30.769 0.00 0.00 0.00 5.36
2580 2875 9.500701 TTCTAAGGAAAAATAAATTAGGGGCAT 57.499 29.630 0.00 0.00 0.00 4.40
2581 2876 9.500701 TCTAAGGAAAAATAAATTAGGGGCATT 57.499 29.630 0.00 0.00 0.00 3.56
2582 2877 9.546428 CTAAGGAAAAATAAATTAGGGGCATTG 57.454 33.333 0.00 0.00 0.00 2.82
2583 2878 6.899089 AGGAAAAATAAATTAGGGGCATTGG 58.101 36.000 0.00 0.00 0.00 3.16
2584 2879 6.446759 AGGAAAAATAAATTAGGGGCATTGGT 59.553 34.615 0.00 0.00 0.00 3.67
2585 2880 7.625682 AGGAAAAATAAATTAGGGGCATTGGTA 59.374 33.333 0.00 0.00 0.00 3.25
2586 2881 7.713507 GGAAAAATAAATTAGGGGCATTGGTAC 59.286 37.037 0.00 0.00 0.00 3.34
2587 2882 7.988249 AAAATAAATTAGGGGCATTGGTACT 57.012 32.000 0.00 0.00 0.00 2.73
2588 2883 9.495382 AAAAATAAATTAGGGGCATTGGTACTA 57.505 29.630 0.00 0.00 0.00 1.82
2589 2884 8.473358 AAATAAATTAGGGGCATTGGTACTAC 57.527 34.615 0.00 0.00 0.00 2.73
2590 2885 4.448720 AATTAGGGGCATTGGTACTACC 57.551 45.455 0.00 0.00 39.22 3.18
2591 2886 1.810455 TAGGGGCATTGGTACTACCC 58.190 55.000 2.59 0.00 37.50 3.69
2592 2887 0.045778 AGGGGCATTGGTACTACCCT 59.954 55.000 2.59 0.00 43.46 4.34
2593 2888 0.924090 GGGGCATTGGTACTACCCTT 59.076 55.000 2.59 0.00 40.64 3.95
2594 2889 1.286849 GGGGCATTGGTACTACCCTTT 59.713 52.381 2.59 0.00 40.64 3.11
2595 2890 2.651455 GGGCATTGGTACTACCCTTTC 58.349 52.381 2.59 0.00 37.50 2.62
2596 2891 2.025699 GGGCATTGGTACTACCCTTTCA 60.026 50.000 2.59 0.00 37.50 2.69
2597 2892 3.562609 GGGCATTGGTACTACCCTTTCAA 60.563 47.826 2.59 0.00 37.50 2.69
2598 2893 4.083565 GGCATTGGTACTACCCTTTCAAA 58.916 43.478 2.59 0.00 37.50 2.69
2599 2894 4.525100 GGCATTGGTACTACCCTTTCAAAA 59.475 41.667 2.59 0.00 37.50 2.44
2600 2895 5.336451 GGCATTGGTACTACCCTTTCAAAAG 60.336 44.000 2.59 0.00 37.50 2.27
2601 2896 5.475564 GCATTGGTACTACCCTTTCAAAAGA 59.524 40.000 2.59 0.00 37.50 2.52
2602 2897 6.015772 GCATTGGTACTACCCTTTCAAAAGAA 60.016 38.462 2.59 0.00 37.50 2.52
2603 2898 7.470841 GCATTGGTACTACCCTTTCAAAAGAAA 60.471 37.037 2.59 0.00 37.50 2.52
2604 2899 7.576861 TTGGTACTACCCTTTCAAAAGAAAG 57.423 36.000 10.24 10.24 37.50 2.62
2605 2900 6.902408 TGGTACTACCCTTTCAAAAGAAAGA 58.098 36.000 17.03 0.01 38.96 2.52
2606 2901 7.348033 TGGTACTACCCTTTCAAAAGAAAGAA 58.652 34.615 17.03 4.29 38.96 2.52
2607 2902 7.501225 TGGTACTACCCTTTCAAAAGAAAGAAG 59.499 37.037 17.03 13.27 38.96 2.85
2608 2903 7.501559 GGTACTACCCTTTCAAAAGAAAGAAGT 59.498 37.037 17.03 16.90 42.94 3.01
2609 2904 7.334844 ACTACCCTTTCAAAAGAAAGAAGTG 57.665 36.000 17.03 11.31 42.94 3.16
2610 2905 7.116736 ACTACCCTTTCAAAAGAAAGAAGTGA 58.883 34.615 17.03 5.47 42.94 3.41
2611 2906 7.780271 ACTACCCTTTCAAAAGAAAGAAGTGAT 59.220 33.333 17.03 6.42 42.94 3.06
2612 2907 9.284968 CTACCCTTTCAAAAGAAAGAAGTGATA 57.715 33.333 17.03 2.44 42.94 2.15
2613 2908 7.941919 ACCCTTTCAAAAGAAAGAAGTGATAC 58.058 34.615 17.03 0.00 42.94 2.24
2614 2909 7.559897 ACCCTTTCAAAAGAAAGAAGTGATACA 59.440 33.333 17.03 0.00 42.94 2.29
2615 2910 8.413229 CCCTTTCAAAAGAAAGAAGTGATACAA 58.587 33.333 17.03 0.00 42.94 2.41
2616 2911 9.801873 CCTTTCAAAAGAAAGAAGTGATACAAA 57.198 29.630 17.03 0.00 42.94 2.83
2660 2955 9.807921 ATAATCAAGTTTTTAAGGAAGACTGGA 57.192 29.630 0.00 0.00 36.97 3.86
2661 2956 8.712228 AATCAAGTTTTTAAGGAAGACTGGAT 57.288 30.769 0.00 0.00 42.17 3.41
2662 2957 8.712228 ATCAAGTTTTTAAGGAAGACTGGATT 57.288 30.769 0.00 0.00 39.08 3.01
2663 2958 9.807921 ATCAAGTTTTTAAGGAAGACTGGATTA 57.192 29.630 0.00 0.00 39.08 1.75
2664 2959 9.284968 TCAAGTTTTTAAGGAAGACTGGATTAG 57.715 33.333 0.00 0.00 33.36 1.73
2665 2960 9.067986 CAAGTTTTTAAGGAAGACTGGATTAGT 57.932 33.333 0.00 0.00 44.02 2.24
2666 2961 8.622948 AGTTTTTAAGGAAGACTGGATTAGTG 57.377 34.615 0.00 0.00 40.53 2.74
2667 2962 7.665974 AGTTTTTAAGGAAGACTGGATTAGTGG 59.334 37.037 0.00 0.00 40.53 4.00
2668 2963 3.636153 AAGGAAGACTGGATTAGTGGC 57.364 47.619 0.00 0.00 40.53 5.01
2669 2964 2.551270 AGGAAGACTGGATTAGTGGCA 58.449 47.619 0.00 0.00 40.53 4.92
2670 2965 3.118531 AGGAAGACTGGATTAGTGGCAT 58.881 45.455 0.00 0.00 40.53 4.40
2671 2966 3.525199 AGGAAGACTGGATTAGTGGCATT 59.475 43.478 0.00 0.00 40.53 3.56
2672 2967 3.629398 GGAAGACTGGATTAGTGGCATTG 59.371 47.826 0.00 0.00 40.53 2.82
2673 2968 4.517285 GAAGACTGGATTAGTGGCATTGA 58.483 43.478 0.00 0.00 40.53 2.57
2674 2969 4.785346 AGACTGGATTAGTGGCATTGAT 57.215 40.909 0.00 0.00 40.53 2.57
2675 2970 5.894298 AGACTGGATTAGTGGCATTGATA 57.106 39.130 0.00 0.00 40.53 2.15
2676 2971 6.445451 AGACTGGATTAGTGGCATTGATAT 57.555 37.500 0.00 0.00 40.53 1.63
2677 2972 6.845908 AGACTGGATTAGTGGCATTGATATT 58.154 36.000 0.00 0.00 40.53 1.28
2678 2973 7.977818 AGACTGGATTAGTGGCATTGATATTA 58.022 34.615 0.00 0.00 40.53 0.98
2679 2974 7.880195 AGACTGGATTAGTGGCATTGATATTAC 59.120 37.037 0.00 0.00 40.53 1.89
2680 2975 6.942576 ACTGGATTAGTGGCATTGATATTACC 59.057 38.462 0.00 0.00 38.49 2.85
2681 2976 6.245408 TGGATTAGTGGCATTGATATTACCC 58.755 40.000 0.00 0.00 0.00 3.69
2682 2977 6.045459 TGGATTAGTGGCATTGATATTACCCT 59.955 38.462 0.00 0.00 0.00 4.34
2683 2978 6.948309 GGATTAGTGGCATTGATATTACCCTT 59.052 38.462 0.00 0.00 0.00 3.95
2684 2979 8.107095 GGATTAGTGGCATTGATATTACCCTTA 58.893 37.037 0.00 0.00 0.00 2.69
2685 2980 9.515226 GATTAGTGGCATTGATATTACCCTTAA 57.485 33.333 0.00 0.00 0.00 1.85
2686 2981 9.875708 ATTAGTGGCATTGATATTACCCTTAAA 57.124 29.630 0.00 0.00 0.00 1.52
2687 2982 9.875708 TTAGTGGCATTGATATTACCCTTAAAT 57.124 29.630 0.00 0.00 0.00 1.40
2689 2984 9.520515 AGTGGCATTGATATTACCCTTAAATAG 57.479 33.333 0.00 0.00 0.00 1.73
2690 2985 8.739972 GTGGCATTGATATTACCCTTAAATAGG 58.260 37.037 0.00 0.00 44.33 2.57
2739 3034 8.749841 ATAAATAATAACAAAACTTGCACGCA 57.250 26.923 0.00 0.00 0.00 5.24
2740 3035 7.470289 AAATAATAACAAAACTTGCACGCAA 57.530 28.000 4.12 4.12 0.00 4.85
2741 3036 7.650834 AATAATAACAAAACTTGCACGCAAT 57.349 28.000 4.68 0.00 35.20 3.56
2742 3037 5.982465 AATAACAAAACTTGCACGCAATT 57.018 30.435 4.68 0.00 35.20 2.32
2743 3038 5.982465 ATAACAAAACTTGCACGCAATTT 57.018 30.435 4.68 3.14 35.20 1.82
2744 3039 7.470289 AATAACAAAACTTGCACGCAATTTA 57.530 28.000 4.68 0.00 35.20 1.40
2745 3040 4.770351 ACAAAACTTGCACGCAATTTAC 57.230 36.364 4.68 0.00 35.20 2.01
2746 3041 4.177026 ACAAAACTTGCACGCAATTTACA 58.823 34.783 4.68 0.00 35.20 2.41
2747 3042 4.032331 ACAAAACTTGCACGCAATTTACAC 59.968 37.500 4.68 0.00 35.20 2.90
2748 3043 3.428746 AACTTGCACGCAATTTACACA 57.571 38.095 4.68 0.00 35.20 3.72
2749 3044 3.641437 ACTTGCACGCAATTTACACAT 57.359 38.095 4.68 0.00 35.20 3.21
2750 3045 4.757799 ACTTGCACGCAATTTACACATA 57.242 36.364 4.68 0.00 35.20 2.29
2751 3046 5.114785 ACTTGCACGCAATTTACACATAA 57.885 34.783 4.68 0.00 35.20 1.90
2752 3047 5.524284 ACTTGCACGCAATTTACACATAAA 58.476 33.333 4.68 0.00 35.20 1.40
2753 3048 6.155827 ACTTGCACGCAATTTACACATAAAT 58.844 32.000 4.68 0.00 41.82 1.40
2763 3058 7.650834 AATTTACACATAAATTGCGCTTTGT 57.349 28.000 9.73 0.00 45.31 2.83
2764 3059 7.650834 ATTTACACATAAATTGCGCTTTGTT 57.349 28.000 9.73 0.00 37.68 2.83
2765 3060 8.749841 ATTTACACATAAATTGCGCTTTGTTA 57.250 26.923 9.73 2.34 37.68 2.41
2766 3061 8.749841 TTTACACATAAATTGCGCTTTGTTAT 57.250 26.923 9.73 4.74 0.00 1.89
2767 3062 9.841880 TTTACACATAAATTGCGCTTTGTTATA 57.158 25.926 9.73 0.00 0.00 0.98
2768 3063 9.841880 TTACACATAAATTGCGCTTTGTTATAA 57.158 25.926 9.73 0.00 0.00 0.98
2769 3064 8.925161 ACACATAAATTGCGCTTTGTTATAAT 57.075 26.923 9.73 0.00 0.00 1.28
2773 3068 9.941991 CATAAATTGCGCTTTGTTATAATATGC 57.058 29.630 9.73 0.00 0.00 3.14
2774 3069 9.689976 ATAAATTGCGCTTTGTTATAATATGCA 57.310 25.926 9.73 0.00 0.00 3.96
2775 3070 8.417780 AAATTGCGCTTTGTTATAATATGCAA 57.582 26.923 9.73 11.27 43.01 4.08
2776 3071 7.627585 ATTGCGCTTTGTTATAATATGCAAG 57.372 32.000 9.73 4.02 42.25 4.01
2777 3072 6.370433 TGCGCTTTGTTATAATATGCAAGA 57.630 33.333 9.73 0.00 0.00 3.02
2778 3073 6.790282 TGCGCTTTGTTATAATATGCAAGAA 58.210 32.000 9.73 0.00 0.00 2.52
2779 3074 7.424803 TGCGCTTTGTTATAATATGCAAGAAT 58.575 30.769 9.73 0.00 0.00 2.40
2780 3075 8.563732 TGCGCTTTGTTATAATATGCAAGAATA 58.436 29.630 9.73 0.00 0.00 1.75
2781 3076 9.393249 GCGCTTTGTTATAATATGCAAGAATAA 57.607 29.630 0.00 0.00 0.00 1.40
2808 3103 8.481974 CATGTAATCATGGATTTCTTTGCAAA 57.518 30.769 12.14 12.14 45.30 3.68
2809 3104 8.937884 CATGTAATCATGGATTTCTTTGCAAAA 58.062 29.630 13.84 0.00 45.30 2.44
2810 3105 8.899427 TGTAATCATGGATTTCTTTGCAAAAA 57.101 26.923 13.84 6.04 33.95 1.94
2811 3106 9.504708 TGTAATCATGGATTTCTTTGCAAAAAT 57.495 25.926 13.84 10.87 33.95 1.82
2814 3109 8.624367 ATCATGGATTTCTTTGCAAAAATTGA 57.376 26.923 13.84 11.40 0.00 2.57
2815 3110 8.447924 TCATGGATTTCTTTGCAAAAATTGAA 57.552 26.923 13.84 10.13 0.00 2.69
2816 3111 8.561212 TCATGGATTTCTTTGCAAAAATTGAAG 58.439 29.630 13.84 0.00 0.00 3.02
2817 3112 7.862512 TGGATTTCTTTGCAAAAATTGAAGT 57.137 28.000 13.84 9.60 0.00 3.01
2818 3113 8.278729 TGGATTTCTTTGCAAAAATTGAAGTT 57.721 26.923 13.84 5.05 0.00 2.66
2819 3114 8.738106 TGGATTTCTTTGCAAAAATTGAAGTTT 58.262 25.926 13.84 2.85 0.00 2.66
2820 3115 9.571810 GGATTTCTTTGCAAAAATTGAAGTTTT 57.428 25.926 13.84 0.00 32.94 2.43
2823 3118 9.609950 TTTCTTTGCAAAAATTGAAGTTTTCTG 57.390 25.926 13.84 0.00 31.29 3.02
2824 3119 8.545229 TCTTTGCAAAAATTGAAGTTTTCTGA 57.455 26.923 13.84 0.00 31.29 3.27
2825 3120 8.997323 TCTTTGCAAAAATTGAAGTTTTCTGAA 58.003 25.926 13.84 0.00 31.29 3.02
2826 3121 9.269415 CTTTGCAAAAATTGAAGTTTTCTGAAG 57.731 29.630 13.84 2.34 31.29 3.02
2827 3122 7.306205 TGCAAAAATTGAAGTTTTCTGAAGG 57.694 32.000 0.00 0.00 31.29 3.46
2828 3123 7.102346 TGCAAAAATTGAAGTTTTCTGAAGGA 58.898 30.769 0.00 0.00 31.29 3.36
2829 3124 7.605691 TGCAAAAATTGAAGTTTTCTGAAGGAA 59.394 29.630 0.00 0.00 31.29 3.36
2830 3125 8.118607 GCAAAAATTGAAGTTTTCTGAAGGAAG 58.881 33.333 0.00 0.00 35.16 3.46
2831 3126 9.369904 CAAAAATTGAAGTTTTCTGAAGGAAGA 57.630 29.630 0.00 0.00 35.16 2.87
2832 3127 9.942850 AAAAATTGAAGTTTTCTGAAGGAAGAA 57.057 25.926 0.00 0.00 35.16 2.52
2834 3129 9.538508 AAATTGAAGTTTTCTGAAGGAAGAATG 57.461 29.630 0.00 0.00 36.12 2.67
2835 3130 7.880160 TTGAAGTTTTCTGAAGGAAGAATGA 57.120 32.000 0.00 0.00 36.12 2.57
2836 3131 7.880160 TGAAGTTTTCTGAAGGAAGAATGAA 57.120 32.000 0.00 0.00 36.12 2.57
2837 3132 8.469309 TGAAGTTTTCTGAAGGAAGAATGAAT 57.531 30.769 0.00 0.00 36.12 2.57
2838 3133 8.917088 TGAAGTTTTCTGAAGGAAGAATGAATT 58.083 29.630 0.00 0.00 36.12 2.17
2841 3136 9.579932 AGTTTTCTGAAGGAAGAATGAATTAGT 57.420 29.630 0.00 0.00 36.12 2.24
2850 3145 9.533831 AAGGAAGAATGAATTAGTTACAATGGT 57.466 29.630 0.00 0.00 0.00 3.55
2863 3158 7.496529 AGTTACAATGGTATTTGATCGATGG 57.503 36.000 0.54 0.00 0.00 3.51
2864 3159 7.054124 AGTTACAATGGTATTTGATCGATGGT 58.946 34.615 0.54 0.00 0.00 3.55
2865 3160 5.756195 ACAATGGTATTTGATCGATGGTG 57.244 39.130 0.54 0.00 0.00 4.17
2866 3161 5.192927 ACAATGGTATTTGATCGATGGTGT 58.807 37.500 0.54 0.00 0.00 4.16
2867 3162 5.296780 ACAATGGTATTTGATCGATGGTGTC 59.703 40.000 0.54 0.00 0.00 3.67
2868 3163 4.753516 TGGTATTTGATCGATGGTGTCT 57.246 40.909 0.54 0.00 0.00 3.41
2869 3164 4.693283 TGGTATTTGATCGATGGTGTCTC 58.307 43.478 0.54 0.00 0.00 3.36
2870 3165 4.405680 TGGTATTTGATCGATGGTGTCTCT 59.594 41.667 0.54 0.00 0.00 3.10
2871 3166 5.596772 TGGTATTTGATCGATGGTGTCTCTA 59.403 40.000 0.54 0.00 0.00 2.43
2872 3167 5.921408 GGTATTTGATCGATGGTGTCTCTAC 59.079 44.000 0.54 0.00 0.00 2.59
2873 3168 5.860941 ATTTGATCGATGGTGTCTCTACT 57.139 39.130 0.54 0.00 0.00 2.57
2874 3169 5.661056 TTTGATCGATGGTGTCTCTACTT 57.339 39.130 0.54 0.00 0.00 2.24
2875 3170 4.639135 TGATCGATGGTGTCTCTACTTG 57.361 45.455 0.54 0.00 0.00 3.16
2876 3171 4.017126 TGATCGATGGTGTCTCTACTTGT 58.983 43.478 0.54 0.00 0.00 3.16
2877 3172 4.096532 TGATCGATGGTGTCTCTACTTGTC 59.903 45.833 0.54 0.00 0.00 3.18
2878 3173 3.687125 TCGATGGTGTCTCTACTTGTCT 58.313 45.455 0.00 0.00 0.00 3.41
2879 3174 3.440522 TCGATGGTGTCTCTACTTGTCTG 59.559 47.826 0.00 0.00 0.00 3.51
2880 3175 3.440522 CGATGGTGTCTCTACTTGTCTGA 59.559 47.826 0.00 0.00 0.00 3.27
2881 3176 4.082733 CGATGGTGTCTCTACTTGTCTGAA 60.083 45.833 0.00 0.00 0.00 3.02
2882 3177 5.393569 CGATGGTGTCTCTACTTGTCTGAAT 60.394 44.000 0.00 0.00 0.00 2.57
2883 3178 5.392767 TGGTGTCTCTACTTGTCTGAATC 57.607 43.478 0.00 0.00 0.00 2.52
2884 3179 4.832823 TGGTGTCTCTACTTGTCTGAATCA 59.167 41.667 0.00 0.00 0.00 2.57
2885 3180 5.304357 TGGTGTCTCTACTTGTCTGAATCAA 59.696 40.000 0.00 0.00 0.00 2.57
2886 3181 6.183360 TGGTGTCTCTACTTGTCTGAATCAAA 60.183 38.462 0.00 0.00 0.00 2.69
2887 3182 6.706270 GGTGTCTCTACTTGTCTGAATCAAAA 59.294 38.462 0.00 0.00 0.00 2.44
2888 3183 7.389053 GGTGTCTCTACTTGTCTGAATCAAAAT 59.611 37.037 0.00 0.00 0.00 1.82
2889 3184 9.424319 GTGTCTCTACTTGTCTGAATCAAAATA 57.576 33.333 0.00 0.00 0.00 1.40
2890 3185 9.996554 TGTCTCTACTTGTCTGAATCAAAATAA 57.003 29.630 0.00 0.00 0.00 1.40
2908 3203 9.621629 TCAAAATAATGAATTAGTGGTATCGGT 57.378 29.630 0.00 0.00 0.00 4.69
2915 3210 6.996509 TGAATTAGTGGTATCGGTATTACCC 58.003 40.000 7.29 0.00 33.75 3.69
2916 3211 6.783977 TGAATTAGTGGTATCGGTATTACCCT 59.216 38.462 7.29 0.00 33.75 4.34
2917 3212 7.290714 TGAATTAGTGGTATCGGTATTACCCTT 59.709 37.037 7.29 0.00 33.75 3.95
2918 3213 7.622502 ATTAGTGGTATCGGTATTACCCTTT 57.377 36.000 7.29 0.00 33.75 3.11
2919 3214 8.725606 ATTAGTGGTATCGGTATTACCCTTTA 57.274 34.615 7.29 0.00 33.75 1.85
2920 3215 8.546083 TTAGTGGTATCGGTATTACCCTTTAA 57.454 34.615 7.29 0.00 33.75 1.52
2921 3216 7.059202 AGTGGTATCGGTATTACCCTTTAAG 57.941 40.000 7.29 0.00 33.75 1.85
2922 3217 6.840705 AGTGGTATCGGTATTACCCTTTAAGA 59.159 38.462 7.29 0.00 33.75 2.10
2923 3218 7.345392 AGTGGTATCGGTATTACCCTTTAAGAA 59.655 37.037 7.29 0.00 33.75 2.52
2924 3219 7.654923 GTGGTATCGGTATTACCCTTTAAGAAG 59.345 40.741 7.29 0.00 33.75 2.85
2925 3220 7.564660 TGGTATCGGTATTACCCTTTAAGAAGA 59.435 37.037 7.29 0.00 33.75 2.87
2926 3221 8.424133 GGTATCGGTATTACCCTTTAAGAAGAA 58.576 37.037 7.29 0.00 33.75 2.52
2927 3222 9.822185 GTATCGGTATTACCCTTTAAGAAGAAA 57.178 33.333 7.29 0.00 33.75 2.52
2959 3254 3.502256 AAATGACAAAAATTGCACGCG 57.498 38.095 3.53 3.53 0.00 6.01
2960 3255 1.417372 ATGACAAAAATTGCACGCGG 58.583 45.000 12.47 0.00 0.00 6.46
2961 3256 0.101399 TGACAAAAATTGCACGCGGT 59.899 45.000 12.47 0.00 0.00 5.68
2962 3257 1.204792 GACAAAAATTGCACGCGGTT 58.795 45.000 12.47 0.00 0.00 4.44
2963 3258 1.590698 GACAAAAATTGCACGCGGTTT 59.409 42.857 12.47 0.28 0.00 3.27
2964 3259 1.325943 ACAAAAATTGCACGCGGTTTG 59.674 42.857 12.47 10.96 33.31 2.93
2965 3260 0.303191 AAAAATTGCACGCGGTTTGC 59.697 45.000 12.47 12.64 40.63 3.68
2969 3264 2.866750 TGCACGCGGTTTGCATAG 59.133 55.556 17.66 0.00 45.06 2.23
2970 3265 1.669437 TGCACGCGGTTTGCATAGA 60.669 52.632 17.66 0.00 45.06 1.98
2971 3266 1.231296 TGCACGCGGTTTGCATAGAA 61.231 50.000 17.66 0.00 45.06 2.10
2972 3267 0.109964 GCACGCGGTTTGCATAGAAA 60.110 50.000 12.47 0.00 46.97 2.52
2973 3268 1.467374 GCACGCGGTTTGCATAGAAAT 60.467 47.619 12.47 0.00 46.97 2.17
2974 3269 2.862512 CACGCGGTTTGCATAGAAATT 58.137 42.857 12.47 0.00 46.97 1.82
2975 3270 3.241701 CACGCGGTTTGCATAGAAATTT 58.758 40.909 12.47 0.00 46.97 1.82
2976 3271 3.300590 CACGCGGTTTGCATAGAAATTTC 59.699 43.478 12.47 10.33 46.97 2.17
2977 3272 2.525891 CGCGGTTTGCATAGAAATTTCG 59.474 45.455 12.42 0.12 46.97 3.46
2978 3273 2.278875 GCGGTTTGCATAGAAATTTCGC 59.721 45.455 12.42 10.51 45.45 4.70
2979 3274 3.758300 CGGTTTGCATAGAAATTTCGCT 58.242 40.909 12.42 1.39 0.00 4.93
2980 3275 4.165779 CGGTTTGCATAGAAATTTCGCTT 58.834 39.130 12.42 0.00 0.00 4.68
2981 3276 4.621034 CGGTTTGCATAGAAATTTCGCTTT 59.379 37.500 12.42 0.00 0.00 3.51
2982 3277 5.118510 CGGTTTGCATAGAAATTTCGCTTTT 59.881 36.000 12.42 0.00 0.00 2.27
2983 3278 6.346518 CGGTTTGCATAGAAATTTCGCTTTTT 60.347 34.615 12.42 0.00 0.00 1.94
3013 3308 6.715344 ATGCAAGAATAAGCACAAATGTTG 57.285 33.333 0.00 0.00 44.49 3.33
3014 3309 5.840715 TGCAAGAATAAGCACAAATGTTGA 58.159 33.333 0.00 0.00 35.51 3.18
3015 3310 6.279123 TGCAAGAATAAGCACAAATGTTGAA 58.721 32.000 0.00 0.00 35.51 2.69
3016 3311 6.760298 TGCAAGAATAAGCACAAATGTTGAAA 59.240 30.769 0.00 0.00 35.51 2.69
3017 3312 7.441760 TGCAAGAATAAGCACAAATGTTGAAAT 59.558 29.630 0.00 0.00 35.51 2.17
3018 3313 8.284693 GCAAGAATAAGCACAAATGTTGAAATT 58.715 29.630 0.00 0.00 0.00 1.82
3021 3316 9.545105 AGAATAAGCACAAATGTTGAAATTTCA 57.455 25.926 16.91 16.91 34.92 2.69
3022 3317 9.584839 GAATAAGCACAAATGTTGAAATTTCAC 57.415 29.630 20.35 15.10 36.83 3.18
3023 3318 5.989551 AGCACAAATGTTGAAATTTCACC 57.010 34.783 20.35 14.37 36.83 4.02
3024 3319 4.815846 AGCACAAATGTTGAAATTTCACCC 59.184 37.500 20.35 13.96 36.83 4.61
3025 3320 4.574013 GCACAAATGTTGAAATTTCACCCA 59.426 37.500 20.35 18.67 36.83 4.51
3026 3321 5.065731 GCACAAATGTTGAAATTTCACCCAA 59.934 36.000 20.35 3.23 36.83 4.12
3027 3322 6.404074 GCACAAATGTTGAAATTTCACCCAAA 60.404 34.615 20.35 2.84 36.83 3.28
3028 3323 7.533426 CACAAATGTTGAAATTTCACCCAAAA 58.467 30.769 20.35 1.63 36.83 2.44
3029 3324 8.025445 CACAAATGTTGAAATTTCACCCAAAAA 58.975 29.630 20.35 1.25 36.83 1.94
3066 3361 8.980481 AAGTAGGAATGAATTAGTGGTATTGG 57.020 34.615 0.00 0.00 0.00 3.16
3067 3362 8.102484 AGTAGGAATGAATTAGTGGTATTGGT 57.898 34.615 0.00 0.00 0.00 3.67
3068 3363 9.220906 AGTAGGAATGAATTAGTGGTATTGGTA 57.779 33.333 0.00 0.00 0.00 3.25
3074 3369 9.582648 AATGAATTAGTGGTATTGGTATTACCC 57.417 33.333 10.37 0.00 37.50 3.69
3075 3370 8.339720 TGAATTAGTGGTATTGGTATTACCCT 57.660 34.615 10.37 1.22 37.50 4.34
3076 3371 8.783903 TGAATTAGTGGTATTGGTATTACCCTT 58.216 33.333 10.37 0.65 37.50 3.95
3081 3376 8.396619 AGTGGTATTGGTATTACCCTTAAAGA 57.603 34.615 10.37 0.00 37.50 2.52
3082 3377 8.838741 AGTGGTATTGGTATTACCCTTAAAGAA 58.161 33.333 10.37 0.00 37.50 2.52
3083 3378 9.117183 GTGGTATTGGTATTACCCTTAAAGAAG 57.883 37.037 10.37 0.00 37.50 2.85
3084 3379 9.060137 TGGTATTGGTATTACCCTTAAAGAAGA 57.940 33.333 10.37 0.00 37.50 2.87
3085 3380 9.910267 GGTATTGGTATTACCCTTAAAGAAGAA 57.090 33.333 10.37 0.00 37.50 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 8.759641 TGCAAACATTTACAACATCAAACATAC 58.240 29.630 0.00 0.00 0.00 2.39
161 162 7.535258 CGATGTCAAAGTAAGATTTGTCCAAAG 59.465 37.037 0.00 0.00 40.36 2.77
195 196 6.920817 TGATATGTCCACGATATAGACCAAC 58.079 40.000 0.00 0.00 0.00 3.77
315 317 7.087409 TGGCACTTGAGTTTAATGATACATG 57.913 36.000 0.00 0.00 0.00 3.21
324 326 4.693566 CGATAGGTTGGCACTTGAGTTTAA 59.306 41.667 0.00 0.00 0.00 1.52
399 401 4.552184 GCTAACAAAAGCGAGTTCGTTCTT 60.552 41.667 3.27 0.00 42.22 2.52
404 406 2.941891 TGCTAACAAAAGCGAGTTCG 57.058 45.000 0.00 0.00 45.85 3.95
440 442 9.573166 TGTATACAATCTATTATTTGCTTGCCT 57.427 29.630 2.20 0.00 0.00 4.75
460 462 6.102006 TGCTGTTCGTTAATGCTTGTATAC 57.898 37.500 0.00 0.00 0.00 1.47
467 469 3.058224 GGTTCTTGCTGTTCGTTAATGCT 60.058 43.478 0.00 0.00 0.00 3.79
468 470 3.234386 GGTTCTTGCTGTTCGTTAATGC 58.766 45.455 0.00 0.00 0.00 3.56
469 471 3.479006 CGGTTCTTGCTGTTCGTTAATG 58.521 45.455 0.00 0.00 0.00 1.90
470 472 2.482721 CCGGTTCTTGCTGTTCGTTAAT 59.517 45.455 0.00 0.00 0.00 1.40
471 473 1.868498 CCGGTTCTTGCTGTTCGTTAA 59.132 47.619 0.00 0.00 0.00 2.01
484 557 4.351054 CAAGCCCAGCCCGGTTCT 62.351 66.667 0.00 0.00 0.00 3.01
507 580 1.448985 TACGCCTGATTCAACAAGGC 58.551 50.000 2.78 2.78 41.84 4.35
508 581 3.334691 TCTTACGCCTGATTCAACAAGG 58.665 45.455 0.00 0.00 0.00 3.61
512 585 2.346803 TGCTCTTACGCCTGATTCAAC 58.653 47.619 0.00 0.00 0.00 3.18
523 596 1.648467 GCAGGCCCTTTGCTCTTACG 61.648 60.000 8.16 0.00 40.92 3.18
533 606 1.888391 GCTCAACTTTAGCAGGCCCTT 60.888 52.381 0.00 0.00 39.83 3.95
534 607 0.322906 GCTCAACTTTAGCAGGCCCT 60.323 55.000 0.00 0.00 39.83 5.19
553 626 2.659428 CCCATGAAAGAAAGCCCTAGG 58.341 52.381 0.06 0.06 0.00 3.02
556 629 0.615827 GGCCCATGAAAGAAAGCCCT 60.616 55.000 0.00 0.00 34.23 5.19
568 641 2.777972 CCACATTCGCAGGCCCATG 61.778 63.158 0.00 0.00 0.00 3.66
577 650 0.391130 TCTGTAGTGCCCACATTCGC 60.391 55.000 0.82 0.00 0.00 4.70
596 669 5.845391 TTTTTGGAAACACGGAGAAGATT 57.155 34.783 0.00 0.00 42.67 2.40
623 696 3.013932 CTGCAGCCCCTCCCTCTT 61.014 66.667 0.00 0.00 0.00 2.85
624 697 4.345286 ACTGCAGCCCCTCCCTCT 62.345 66.667 15.27 0.00 0.00 3.69
669 775 1.076923 TCCCCTCCGAGTACTCAGC 60.077 63.158 22.37 0.00 0.00 4.26
672 778 0.838608 TCTCTCCCCTCCGAGTACTC 59.161 60.000 13.18 13.18 0.00 2.59
725 840 0.687354 TGGTGGCAAAGAGGAGAGAC 59.313 55.000 0.00 0.00 0.00 3.36
741 856 4.365111 ATGCATGCGTGGGGTGGT 62.365 61.111 12.68 0.00 0.00 4.16
749 865 2.592574 CGGATCCCATGCATGCGT 60.593 61.111 21.69 10.53 31.07 5.24
751 867 0.820891 AGTTCGGATCCCATGCATGC 60.821 55.000 21.69 11.82 0.00 4.06
777 893 2.585153 GGGAGCGGAAGAAGACCC 59.415 66.667 0.00 0.00 0.00 4.46
782 898 2.283676 AGACGGGGAGCGGAAGAA 60.284 61.111 0.00 0.00 0.00 2.52
896 1018 1.066430 TGATCTACCACCTCGCAAACC 60.066 52.381 0.00 0.00 0.00 3.27
908 1030 1.271102 GGGATCTCTGCGTGATCTACC 59.729 57.143 15.20 8.89 39.95 3.18
910 1032 1.202770 TCGGGATCTCTGCGTGATCTA 60.203 52.381 15.20 4.82 39.95 1.98
917 1039 2.193865 CTCGGATCGGGATCTCTGCG 62.194 65.000 8.45 4.15 37.92 5.18
918 1040 0.891449 TCTCGGATCGGGATCTCTGC 60.891 60.000 8.45 0.00 37.92 4.26
929 1051 2.139118 GTGCCTAATTGCTCTCGGATC 58.861 52.381 0.00 0.00 0.00 3.36
930 1052 1.539065 CGTGCCTAATTGCTCTCGGAT 60.539 52.381 0.00 0.00 0.00 4.18
931 1053 0.179111 CGTGCCTAATTGCTCTCGGA 60.179 55.000 0.00 0.00 0.00 4.55
934 1056 0.654683 CTGCGTGCCTAATTGCTCTC 59.345 55.000 0.00 0.00 0.00 3.20
936 1058 1.063166 GCTGCGTGCCTAATTGCTC 59.937 57.895 0.00 0.00 35.15 4.26
939 1061 0.305922 GCTAGCTGCGTGCCTAATTG 59.694 55.000 7.70 0.00 44.23 2.32
978 1109 3.706086 TCTTGGATCAATGATCACTCCGA 59.294 43.478 22.93 7.81 40.50 4.55
979 1110 4.063998 TCTTGGATCAATGATCACTCCG 57.936 45.455 22.93 7.91 40.50 4.63
980 1111 5.618236 TCATCTTGGATCAATGATCACTCC 58.382 41.667 22.93 9.37 40.50 3.85
981 1112 6.292757 CGTTCATCTTGGATCAATGATCACTC 60.293 42.308 22.93 8.08 40.50 3.51
991 1122 3.197549 TCCACATCGTTCATCTTGGATCA 59.802 43.478 0.00 0.00 0.00 2.92
1134 1265 2.224233 ACAGATTCATGCAGAGGATCGG 60.224 50.000 8.25 8.25 42.67 4.18
1148 1279 7.636326 TCGACCTTTTAAAGTTGAACAGATTC 58.364 34.615 3.91 0.00 35.18 2.52
1253 1401 1.067821 GTACTCCTGCCTGATCTTCCG 59.932 57.143 0.00 0.00 0.00 4.30
1321 1469 1.195347 GATCGACGACATGTGCTCTG 58.805 55.000 1.15 0.00 0.00 3.35
1350 1498 2.505405 CCGGTCGGATGAAGAGAGATA 58.495 52.381 2.83 0.00 37.50 1.98
1579 1745 5.465390 CACCGTATCTTCTTCTGAAACAACA 59.535 40.000 0.00 0.00 0.00 3.33
1582 1748 3.994392 GCACCGTATCTTCTTCTGAAACA 59.006 43.478 0.00 0.00 0.00 2.83
1584 1750 4.021456 TCTGCACCGTATCTTCTTCTGAAA 60.021 41.667 0.00 0.00 0.00 2.69
1588 1767 2.428890 CCTCTGCACCGTATCTTCTTCT 59.571 50.000 0.00 0.00 0.00 2.85
1598 1777 2.203640 TCAGTCCCTCTGCACCGT 60.204 61.111 0.00 0.00 43.32 4.83
1600 1779 1.768684 TTGGTCAGTCCCTCTGCACC 61.769 60.000 0.00 0.00 43.32 5.01
2051 2341 3.541632 TGGCGATGAGGATTAAGGAAAC 58.458 45.455 0.00 0.00 0.00 2.78
2052 2342 3.924114 TGGCGATGAGGATTAAGGAAA 57.076 42.857 0.00 0.00 0.00 3.13
2070 2361 4.984161 AGAAACATTTCAAACGCTGAATGG 59.016 37.500 7.10 1.03 43.64 3.16
2079 2370 5.578776 ACCAAGACGAGAAACATTTCAAAC 58.421 37.500 7.10 0.00 39.61 2.93
2100 2391 1.354040 CTGATCTGCGACACAAGACC 58.646 55.000 0.00 0.00 0.00 3.85
2134 2425 5.877012 ACTTATTATTGTGACACCTGCTGAG 59.123 40.000 2.45 0.00 0.00 3.35
2151 2442 8.814235 GCGCACACTAAATTAAGAGACTTATTA 58.186 33.333 0.30 0.00 0.00 0.98
2152 2443 7.549488 AGCGCACACTAAATTAAGAGACTTATT 59.451 33.333 11.47 0.00 0.00 1.40
2153 2444 7.010552 CAGCGCACACTAAATTAAGAGACTTAT 59.989 37.037 11.47 0.00 0.00 1.73
2190 2481 8.203485 TGTGGTGCTTTATTCAAGAAGAAAAAT 58.797 29.630 4.44 0.00 40.22 1.82
2219 2514 3.487202 CACATCACGAACCGGCCG 61.487 66.667 21.04 21.04 0.00 6.13
2222 2517 0.941542 ACAAACACATCACGAACCGG 59.058 50.000 0.00 0.00 0.00 5.28
2293 2588 9.613428 GCAATATATCATTTGCAGGTAGGTATA 57.387 33.333 11.16 0.00 45.83 1.47
2294 2589 8.511604 GCAATATATCATTTGCAGGTAGGTAT 57.488 34.615 11.16 0.00 45.83 2.73
2304 2599 6.387465 ACAGATGCAGCAATATATCATTTGC 58.613 36.000 4.07 8.97 46.68 3.68
2305 2600 9.556030 CTTACAGATGCAGCAATATATCATTTG 57.444 33.333 4.07 0.00 0.00 2.32
2306 2601 9.293404 ACTTACAGATGCAGCAATATATCATTT 57.707 29.630 4.07 0.00 0.00 2.32
2319 2614 5.928839 ACTCAGTTACAACTTACAGATGCAG 59.071 40.000 0.00 0.00 37.08 4.41
2353 2648 2.356382 CACTCAGTTACACCCGCAAAAA 59.644 45.455 0.00 0.00 0.00 1.94
2354 2649 1.944024 CACTCAGTTACACCCGCAAAA 59.056 47.619 0.00 0.00 0.00 2.44
2355 2650 1.134340 ACACTCAGTTACACCCGCAAA 60.134 47.619 0.00 0.00 0.00 3.68
2356 2651 0.466543 ACACTCAGTTACACCCGCAA 59.533 50.000 0.00 0.00 0.00 4.85
2357 2652 1.330234 TACACTCAGTTACACCCGCA 58.670 50.000 0.00 0.00 0.00 5.69
2358 2653 2.667473 ATACACTCAGTTACACCCGC 57.333 50.000 0.00 0.00 0.00 6.13
2359 2654 4.159135 AGGTAATACACTCAGTTACACCCG 59.841 45.833 0.00 0.00 31.59 5.28
2360 2655 5.658468 GAGGTAATACACTCAGTTACACCC 58.342 45.833 0.00 0.00 33.95 4.61
2361 2656 5.338365 CGAGGTAATACACTCAGTTACACC 58.662 45.833 8.75 0.00 33.36 4.16
2362 2657 5.105997 ACCGAGGTAATACACTCAGTTACAC 60.106 44.000 0.00 0.00 33.36 2.90
2363 2658 5.012239 ACCGAGGTAATACACTCAGTTACA 58.988 41.667 0.00 0.00 33.36 2.41
2364 2659 5.105997 ACACCGAGGTAATACACTCAGTTAC 60.106 44.000 0.00 0.00 33.36 2.50
2365 2660 5.012239 ACACCGAGGTAATACACTCAGTTA 58.988 41.667 0.00 0.00 33.36 2.24
2366 2661 3.830755 ACACCGAGGTAATACACTCAGTT 59.169 43.478 0.00 0.00 33.36 3.16
2367 2662 3.428532 ACACCGAGGTAATACACTCAGT 58.571 45.455 0.00 2.44 33.36 3.41
2368 2663 3.442625 TGACACCGAGGTAATACACTCAG 59.557 47.826 0.00 1.96 33.36 3.35
2369 2664 3.192001 GTGACACCGAGGTAATACACTCA 59.808 47.826 0.00 0.00 33.36 3.41
2370 2665 3.428589 GGTGACACCGAGGTAATACACTC 60.429 52.174 9.33 0.00 0.00 3.51
2371 2666 2.494870 GGTGACACCGAGGTAATACACT 59.505 50.000 9.33 0.00 0.00 3.55
2372 2667 2.494870 AGGTGACACCGAGGTAATACAC 59.505 50.000 18.93 3.59 44.90 2.90
2373 2668 2.811410 AGGTGACACCGAGGTAATACA 58.189 47.619 18.93 0.00 44.90 2.29
2374 2669 3.950395 ACTAGGTGACACCGAGGTAATAC 59.050 47.826 30.83 1.91 44.12 1.89
2375 2670 4.240881 ACTAGGTGACACCGAGGTAATA 57.759 45.455 30.83 12.17 44.12 0.98
2376 2671 3.097342 ACTAGGTGACACCGAGGTAAT 57.903 47.619 30.83 13.19 44.12 1.89
2377 2672 2.592102 ACTAGGTGACACCGAGGTAA 57.408 50.000 30.83 10.12 44.12 2.85
2378 2673 3.939740 ATACTAGGTGACACCGAGGTA 57.060 47.619 30.83 25.40 44.12 3.08
2379 2674 2.758979 CAATACTAGGTGACACCGAGGT 59.241 50.000 30.83 24.40 44.12 3.85
2380 2675 2.758979 ACAATACTAGGTGACACCGAGG 59.241 50.000 30.83 20.94 44.12 4.63
2381 2676 4.639310 AGTACAATACTAGGTGACACCGAG 59.361 45.833 27.53 27.53 44.90 4.63
2382 2677 4.397103 CAGTACAATACTAGGTGACACCGA 59.603 45.833 18.93 13.12 39.28 4.69
2383 2678 4.157289 ACAGTACAATACTAGGTGACACCG 59.843 45.833 18.93 8.42 39.28 4.94
2384 2679 5.656213 ACAGTACAATACTAGGTGACACC 57.344 43.478 17.43 17.43 37.23 4.16
2385 2680 7.149569 TGTACAGTACAATACTAGGTGACAC 57.850 40.000 11.21 0.00 37.23 3.67
2386 2681 7.949690 ATGTACAGTACAATACTAGGTGACA 57.050 36.000 17.43 0.00 42.76 3.58
2387 2682 9.118300 ACTATGTACAGTACAATACTAGGTGAC 57.882 37.037 17.43 0.00 42.76 3.67
2390 2685 9.282569 GCTACTATGTACAGTACAATACTAGGT 57.717 37.037 17.43 10.32 42.76 3.08
2391 2686 9.281371 TGCTACTATGTACAGTACAATACTAGG 57.719 37.037 17.43 6.36 42.76 3.02
2393 2688 9.060347 GGTGCTACTATGTACAGTACAATACTA 57.940 37.037 17.43 4.74 42.76 1.82
2394 2689 7.558807 TGGTGCTACTATGTACAGTACAATACT 59.441 37.037 17.43 3.76 42.76 2.12
2395 2690 7.709947 TGGTGCTACTATGTACAGTACAATAC 58.290 38.462 17.43 8.53 42.76 1.89
2396 2691 7.469594 GCTGGTGCTACTATGTACAGTACAATA 60.470 40.741 17.43 9.39 38.02 1.90
2397 2692 6.683110 GCTGGTGCTACTATGTACAGTACAAT 60.683 42.308 17.43 8.76 38.02 2.71
2398 2693 5.393787 GCTGGTGCTACTATGTACAGTACAA 60.394 44.000 17.43 6.48 38.02 2.41
2399 2694 4.097437 GCTGGTGCTACTATGTACAGTACA 59.903 45.833 15.90 15.90 38.51 2.90
2400 2695 4.097437 TGCTGGTGCTACTATGTACAGTAC 59.903 45.833 0.33 3.49 40.48 2.73
2401 2696 4.274978 TGCTGGTGCTACTATGTACAGTA 58.725 43.478 0.33 0.00 40.48 2.74
2402 2697 3.096852 TGCTGGTGCTACTATGTACAGT 58.903 45.455 0.33 0.00 40.48 3.55
2403 2698 3.801114 TGCTGGTGCTACTATGTACAG 57.199 47.619 0.33 0.00 40.48 2.74
2404 2699 4.221924 TCTTTGCTGGTGCTACTATGTACA 59.778 41.667 0.00 0.00 40.48 2.90
2405 2700 4.567159 GTCTTTGCTGGTGCTACTATGTAC 59.433 45.833 0.00 0.00 40.48 2.90
2406 2701 4.382685 GGTCTTTGCTGGTGCTACTATGTA 60.383 45.833 0.00 0.00 40.48 2.29
2407 2702 3.600388 GTCTTTGCTGGTGCTACTATGT 58.400 45.455 0.00 0.00 40.48 2.29
2408 2703 2.939103 GGTCTTTGCTGGTGCTACTATG 59.061 50.000 0.00 0.00 40.48 2.23
2409 2704 2.571653 TGGTCTTTGCTGGTGCTACTAT 59.428 45.455 0.00 0.00 40.48 2.12
2410 2705 1.974957 TGGTCTTTGCTGGTGCTACTA 59.025 47.619 0.00 0.00 40.48 1.82
2411 2706 0.764890 TGGTCTTTGCTGGTGCTACT 59.235 50.000 0.00 0.00 40.48 2.57
2412 2707 1.470098 CATGGTCTTTGCTGGTGCTAC 59.530 52.381 0.00 0.00 40.48 3.58
2413 2708 1.350684 TCATGGTCTTTGCTGGTGCTA 59.649 47.619 0.00 0.00 40.48 3.49
2414 2709 0.111061 TCATGGTCTTTGCTGGTGCT 59.889 50.000 0.00 0.00 40.48 4.40
2415 2710 0.961019 TTCATGGTCTTTGCTGGTGC 59.039 50.000 0.00 0.00 40.20 5.01
2416 2711 2.029649 CCTTTCATGGTCTTTGCTGGTG 60.030 50.000 0.00 0.00 0.00 4.17
2417 2712 2.242043 CCTTTCATGGTCTTTGCTGGT 58.758 47.619 0.00 0.00 0.00 4.00
2418 2713 2.242043 ACCTTTCATGGTCTTTGCTGG 58.758 47.619 0.00 0.00 34.86 4.85
2419 2714 4.326504 AAACCTTTCATGGTCTTTGCTG 57.673 40.909 0.00 0.00 39.83 4.41
2420 2715 4.499696 CGAAAACCTTTCATGGTCTTTGCT 60.500 41.667 0.00 0.00 39.83 3.91
2421 2716 3.735746 CGAAAACCTTTCATGGTCTTTGC 59.264 43.478 0.00 0.00 39.83 3.68
2422 2717 4.932146 ACGAAAACCTTTCATGGTCTTTG 58.068 39.130 0.00 0.00 39.83 2.77
2423 2718 5.588240 GAACGAAAACCTTTCATGGTCTTT 58.412 37.500 0.00 0.00 39.83 2.52
2424 2719 4.261031 CGAACGAAAACCTTTCATGGTCTT 60.261 41.667 0.00 0.00 39.83 3.01
2425 2720 3.250040 CGAACGAAAACCTTTCATGGTCT 59.750 43.478 0.00 0.00 39.83 3.85
2426 2721 3.249080 TCGAACGAAAACCTTTCATGGTC 59.751 43.478 0.00 0.00 39.83 4.02
2427 2722 3.207778 TCGAACGAAAACCTTTCATGGT 58.792 40.909 0.00 0.00 43.11 3.55
2428 2723 3.889196 TCGAACGAAAACCTTTCATGG 57.111 42.857 0.00 0.00 0.00 3.66
2449 2744 2.699846 TGCTGCCTCATGGTTTCTTTTT 59.300 40.909 0.00 0.00 35.27 1.94
2450 2745 2.318908 TGCTGCCTCATGGTTTCTTTT 58.681 42.857 0.00 0.00 35.27 2.27
2451 2746 1.999648 TGCTGCCTCATGGTTTCTTT 58.000 45.000 0.00 0.00 35.27 2.52
2452 2747 1.999648 TTGCTGCCTCATGGTTTCTT 58.000 45.000 0.00 0.00 35.27 2.52
2453 2748 1.999648 TTTGCTGCCTCATGGTTTCT 58.000 45.000 0.00 0.00 35.27 2.52
2454 2749 2.297033 TCTTTTGCTGCCTCATGGTTTC 59.703 45.455 0.00 0.00 35.27 2.78
2455 2750 2.318908 TCTTTTGCTGCCTCATGGTTT 58.681 42.857 0.00 0.00 35.27 3.27
2456 2751 1.999648 TCTTTTGCTGCCTCATGGTT 58.000 45.000 0.00 0.00 35.27 3.67
2457 2752 1.999648 TTCTTTTGCTGCCTCATGGT 58.000 45.000 0.00 0.00 35.27 3.55
2458 2753 2.559668 TCTTTCTTTTGCTGCCTCATGG 59.440 45.455 0.00 0.00 0.00 3.66
2459 2754 3.928727 TCTTTCTTTTGCTGCCTCATG 57.071 42.857 0.00 0.00 0.00 3.07
2460 2755 4.942761 TTTCTTTCTTTTGCTGCCTCAT 57.057 36.364 0.00 0.00 0.00 2.90
2461 2756 4.734398 TTTTCTTTCTTTTGCTGCCTCA 57.266 36.364 0.00 0.00 0.00 3.86
2462 2757 7.713764 TTTATTTTCTTTCTTTTGCTGCCTC 57.286 32.000 0.00 0.00 0.00 4.70
2463 2758 8.504812 TTTTTATTTTCTTTCTTTTGCTGCCT 57.495 26.923 0.00 0.00 0.00 4.75
2497 2792 9.709387 AGGGTAATACCAATGCTACTAATTTTT 57.291 29.630 12.03 0.00 41.02 1.94
2498 2793 9.709387 AAGGGTAATACCAATGCTACTAATTTT 57.291 29.630 12.03 0.00 41.02 1.82
2499 2794 9.709387 AAAGGGTAATACCAATGCTACTAATTT 57.291 29.630 12.03 0.00 41.02 1.82
2500 2795 9.350951 GAAAGGGTAATACCAATGCTACTAATT 57.649 33.333 12.03 0.00 41.02 1.40
2501 2796 8.499406 TGAAAGGGTAATACCAATGCTACTAAT 58.501 33.333 12.03 0.00 41.02 1.73
2502 2797 7.863722 TGAAAGGGTAATACCAATGCTACTAA 58.136 34.615 12.03 0.00 41.02 2.24
2503 2798 7.440505 TGAAAGGGTAATACCAATGCTACTA 57.559 36.000 12.03 0.00 41.02 1.82
2504 2799 6.321821 TGAAAGGGTAATACCAATGCTACT 57.678 37.500 12.03 0.00 41.02 2.57
2505 2800 7.399245 TTTGAAAGGGTAATACCAATGCTAC 57.601 36.000 12.03 0.00 41.02 3.58
2506 2801 7.891183 TCTTTTGAAAGGGTAATACCAATGCTA 59.109 33.333 12.03 0.00 41.02 3.49
2507 2802 6.723977 TCTTTTGAAAGGGTAATACCAATGCT 59.276 34.615 12.03 0.00 41.02 3.79
2508 2803 6.930731 TCTTTTGAAAGGGTAATACCAATGC 58.069 36.000 12.03 0.00 41.02 3.56
2553 2848 9.327731 TGCCCCTAATTTATTTTTCCTTAGAAA 57.672 29.630 0.00 0.00 40.26 2.52
2554 2849 8.903059 TGCCCCTAATTTATTTTTCCTTAGAA 57.097 30.769 0.00 0.00 0.00 2.10
2555 2850 9.500701 AATGCCCCTAATTTATTTTTCCTTAGA 57.499 29.630 0.00 0.00 0.00 2.10
2556 2851 9.546428 CAATGCCCCTAATTTATTTTTCCTTAG 57.454 33.333 0.00 0.00 0.00 2.18
2557 2852 8.490311 CCAATGCCCCTAATTTATTTTTCCTTA 58.510 33.333 0.00 0.00 0.00 2.69
2558 2853 7.036935 ACCAATGCCCCTAATTTATTTTTCCTT 60.037 33.333 0.00 0.00 0.00 3.36
2559 2854 6.446759 ACCAATGCCCCTAATTTATTTTTCCT 59.553 34.615 0.00 0.00 0.00 3.36
2560 2855 6.658849 ACCAATGCCCCTAATTTATTTTTCC 58.341 36.000 0.00 0.00 0.00 3.13
2561 2856 8.482943 AGTACCAATGCCCCTAATTTATTTTTC 58.517 33.333 0.00 0.00 0.00 2.29
2562 2857 8.387333 AGTACCAATGCCCCTAATTTATTTTT 57.613 30.769 0.00 0.00 0.00 1.94
2563 2858 7.988249 AGTACCAATGCCCCTAATTTATTTT 57.012 32.000 0.00 0.00 0.00 1.82
2564 2859 7.507956 GGTAGTACCAATGCCCCTAATTTATTT 59.492 37.037 14.82 0.00 38.42 1.40
2565 2860 7.008332 GGTAGTACCAATGCCCCTAATTTATT 58.992 38.462 14.82 0.00 38.42 1.40
2566 2861 6.468212 GGGTAGTACCAATGCCCCTAATTTAT 60.468 42.308 20.97 0.00 41.02 1.40
2567 2862 5.163066 GGGTAGTACCAATGCCCCTAATTTA 60.163 44.000 20.97 0.00 41.02 1.40
2568 2863 4.387098 GGGTAGTACCAATGCCCCTAATTT 60.387 45.833 20.97 0.00 41.02 1.82
2569 2864 3.139584 GGGTAGTACCAATGCCCCTAATT 59.860 47.826 20.97 0.00 41.02 1.40
2570 2865 2.714793 GGGTAGTACCAATGCCCCTAAT 59.285 50.000 20.97 0.00 41.02 1.73
2571 2866 2.129363 GGGTAGTACCAATGCCCCTAA 58.871 52.381 20.97 0.00 41.02 2.69
2572 2867 1.295907 AGGGTAGTACCAATGCCCCTA 59.704 52.381 20.97 0.00 43.21 3.53
2573 2868 0.045778 AGGGTAGTACCAATGCCCCT 59.954 55.000 20.97 4.08 43.21 4.79
2574 2869 0.924090 AAGGGTAGTACCAATGCCCC 59.076 55.000 20.97 1.59 43.21 5.80
2575 2870 2.025699 TGAAAGGGTAGTACCAATGCCC 60.026 50.000 20.97 2.35 41.02 5.36
2576 2871 3.359695 TGAAAGGGTAGTACCAATGCC 57.640 47.619 20.97 3.12 41.02 4.40
2577 2872 5.475564 TCTTTTGAAAGGGTAGTACCAATGC 59.524 40.000 20.97 8.02 41.02 3.56
2578 2873 7.519032 TTCTTTTGAAAGGGTAGTACCAATG 57.481 36.000 20.97 7.77 36.21 2.82
2634 2929 9.807921 TCCAGTCTTCCTTAAAAACTTGATTAT 57.192 29.630 0.00 0.00 0.00 1.28
2635 2930 9.807921 ATCCAGTCTTCCTTAAAAACTTGATTA 57.192 29.630 0.00 0.00 0.00 1.75
2636 2931 8.712228 ATCCAGTCTTCCTTAAAAACTTGATT 57.288 30.769 0.00 0.00 0.00 2.57
2637 2932 8.712228 AATCCAGTCTTCCTTAAAAACTTGAT 57.288 30.769 0.00 0.00 0.00 2.57
2638 2933 9.284968 CTAATCCAGTCTTCCTTAAAAACTTGA 57.715 33.333 0.00 0.00 0.00 3.02
2639 2934 9.067986 ACTAATCCAGTCTTCCTTAAAAACTTG 57.932 33.333 0.00 0.00 28.33 3.16
2640 2935 9.067986 CACTAATCCAGTCTTCCTTAAAAACTT 57.932 33.333 0.00 0.00 34.26 2.66
2641 2936 7.665974 CCACTAATCCAGTCTTCCTTAAAAACT 59.334 37.037 0.00 0.00 34.26 2.66
2642 2937 7.575155 GCCACTAATCCAGTCTTCCTTAAAAAC 60.575 40.741 0.00 0.00 34.26 2.43
2643 2938 6.433093 GCCACTAATCCAGTCTTCCTTAAAAA 59.567 38.462 0.00 0.00 34.26 1.94
2644 2939 5.944007 GCCACTAATCCAGTCTTCCTTAAAA 59.056 40.000 0.00 0.00 34.26 1.52
2645 2940 5.013704 TGCCACTAATCCAGTCTTCCTTAAA 59.986 40.000 0.00 0.00 34.26 1.52
2646 2941 4.534500 TGCCACTAATCCAGTCTTCCTTAA 59.466 41.667 0.00 0.00 34.26 1.85
2647 2942 4.101114 TGCCACTAATCCAGTCTTCCTTA 58.899 43.478 0.00 0.00 34.26 2.69
2648 2943 2.912956 TGCCACTAATCCAGTCTTCCTT 59.087 45.455 0.00 0.00 34.26 3.36
2649 2944 2.551270 TGCCACTAATCCAGTCTTCCT 58.449 47.619 0.00 0.00 34.26 3.36
2650 2945 3.567478 ATGCCACTAATCCAGTCTTCC 57.433 47.619 0.00 0.00 34.26 3.46
2651 2946 4.517285 TCAATGCCACTAATCCAGTCTTC 58.483 43.478 0.00 0.00 34.26 2.87
2652 2947 4.574674 TCAATGCCACTAATCCAGTCTT 57.425 40.909 0.00 0.00 34.26 3.01
2653 2948 4.785346 ATCAATGCCACTAATCCAGTCT 57.215 40.909 0.00 0.00 34.26 3.24
2654 2949 7.119846 GGTAATATCAATGCCACTAATCCAGTC 59.880 40.741 0.00 0.00 34.26 3.51
2655 2950 6.942576 GGTAATATCAATGCCACTAATCCAGT 59.057 38.462 0.00 0.00 38.32 4.00
2656 2951 6.375455 GGGTAATATCAATGCCACTAATCCAG 59.625 42.308 0.00 0.00 0.00 3.86
2657 2952 6.045459 AGGGTAATATCAATGCCACTAATCCA 59.955 38.462 0.00 0.00 0.00 3.41
2658 2953 6.485171 AGGGTAATATCAATGCCACTAATCC 58.515 40.000 0.00 0.00 0.00 3.01
2659 2954 9.515226 TTAAGGGTAATATCAATGCCACTAATC 57.485 33.333 0.00 0.00 0.00 1.75
2660 2955 9.875708 TTTAAGGGTAATATCAATGCCACTAAT 57.124 29.630 0.00 0.00 0.00 1.73
2661 2956 9.875708 ATTTAAGGGTAATATCAATGCCACTAA 57.124 29.630 0.00 0.00 0.00 2.24
2663 2958 9.520515 CTATTTAAGGGTAATATCAATGCCACT 57.479 33.333 0.00 0.00 0.00 4.00
2664 2959 8.739972 CCTATTTAAGGGTAATATCAATGCCAC 58.260 37.037 0.00 0.00 42.32 5.01
2665 2960 8.877864 CCTATTTAAGGGTAATATCAATGCCA 57.122 34.615 0.00 0.00 42.32 4.92
2713 3008 9.197694 TGCGTGCAAGTTTTGTTATTATTTATT 57.802 25.926 0.59 0.00 0.00 1.40
2714 3009 8.749841 TGCGTGCAAGTTTTGTTATTATTTAT 57.250 26.923 0.59 0.00 0.00 1.40
2715 3010 8.575565 TTGCGTGCAAGTTTTGTTATTATTTA 57.424 26.923 2.58 0.00 0.00 1.40
2716 3011 7.470289 TTGCGTGCAAGTTTTGTTATTATTT 57.530 28.000 2.58 0.00 0.00 1.40
2717 3012 7.650834 ATTGCGTGCAAGTTTTGTTATTATT 57.349 28.000 13.25 0.00 39.47 1.40
2718 3013 7.650834 AATTGCGTGCAAGTTTTGTTATTAT 57.349 28.000 13.25 0.00 39.47 1.28
2719 3014 7.470289 AAATTGCGTGCAAGTTTTGTTATTA 57.530 28.000 13.80 0.00 40.62 0.98
2720 3015 5.982465 AATTGCGTGCAAGTTTTGTTATT 57.018 30.435 13.25 0.00 39.47 1.40
2721 3016 5.982465 AAATTGCGTGCAAGTTTTGTTAT 57.018 30.435 13.80 0.00 40.62 1.89
2722 3017 5.805486 TGTAAATTGCGTGCAAGTTTTGTTA 59.195 32.000 22.81 4.58 40.62 2.41
2723 3018 4.627467 TGTAAATTGCGTGCAAGTTTTGTT 59.373 33.333 22.81 4.52 40.62 2.83
2724 3019 4.032331 GTGTAAATTGCGTGCAAGTTTTGT 59.968 37.500 22.81 4.14 40.62 2.83
2725 3020 4.032217 TGTGTAAATTGCGTGCAAGTTTTG 59.968 37.500 22.81 0.00 40.62 2.44
2726 3021 4.177026 TGTGTAAATTGCGTGCAAGTTTT 58.823 34.783 22.81 15.94 40.62 2.43
2727 3022 3.775202 TGTGTAAATTGCGTGCAAGTTT 58.225 36.364 22.81 17.98 40.62 2.66
2728 3023 3.428746 TGTGTAAATTGCGTGCAAGTT 57.571 38.095 21.62 21.62 44.63 2.66
2729 3024 3.641437 ATGTGTAAATTGCGTGCAAGT 57.359 38.095 13.25 7.61 39.47 3.16
2730 3025 6.630676 ATTTATGTGTAAATTGCGTGCAAG 57.369 33.333 13.25 0.00 37.24 4.01
2739 3034 7.650834 ACAAAGCGCAATTTATGTGTAAATT 57.349 28.000 11.47 1.43 46.34 1.82
2740 3035 7.650834 AACAAAGCGCAATTTATGTGTAAAT 57.349 28.000 11.47 0.00 41.18 1.40
2741 3036 8.749841 ATAACAAAGCGCAATTTATGTGTAAA 57.250 26.923 11.47 0.00 41.73 2.01
2742 3037 9.841880 TTATAACAAAGCGCAATTTATGTGTAA 57.158 25.926 11.47 5.89 41.73 2.41
2744 3039 8.925161 ATTATAACAAAGCGCAATTTATGTGT 57.075 26.923 11.47 0.00 41.73 3.72
2747 3042 9.941991 GCATATTATAACAAAGCGCAATTTATG 57.058 29.630 11.47 8.36 0.00 1.90
2748 3043 9.689976 TGCATATTATAACAAAGCGCAATTTAT 57.310 25.926 11.47 9.28 0.00 1.40
2749 3044 9.521503 TTGCATATTATAACAAAGCGCAATTTA 57.478 25.926 11.47 1.36 32.36 1.40
2750 3045 8.417780 TTGCATATTATAACAAAGCGCAATTT 57.582 26.923 11.47 0.00 32.36 1.82
2751 3046 7.920151 TCTTGCATATTATAACAAAGCGCAATT 59.080 29.630 11.47 0.24 36.38 2.32
2752 3047 7.424803 TCTTGCATATTATAACAAAGCGCAAT 58.575 30.769 11.47 0.00 36.38 3.56
2753 3048 6.790282 TCTTGCATATTATAACAAAGCGCAA 58.210 32.000 11.47 0.00 35.70 4.85
2754 3049 6.370433 TCTTGCATATTATAACAAAGCGCA 57.630 33.333 11.47 0.00 0.00 6.09
2755 3050 7.858052 ATTCTTGCATATTATAACAAAGCGC 57.142 32.000 0.00 0.00 0.00 5.92
2784 3079 9.504708 TTTTTGCAAAGAAATCCATGATTACAT 57.495 25.926 12.41 0.00 37.19 2.29
2785 3080 8.899427 TTTTTGCAAAGAAATCCATGATTACA 57.101 26.923 12.41 0.00 31.46 2.41
2788 3083 9.069082 TCAATTTTTGCAAAGAAATCCATGATT 57.931 25.926 12.41 0.00 33.25 2.57
2789 3084 8.624367 TCAATTTTTGCAAAGAAATCCATGAT 57.376 26.923 12.41 0.00 0.00 2.45
2790 3085 8.447924 TTCAATTTTTGCAAAGAAATCCATGA 57.552 26.923 12.41 8.30 0.00 3.07
2791 3086 8.347035 ACTTCAATTTTTGCAAAGAAATCCATG 58.653 29.630 12.41 6.27 0.00 3.66
2792 3087 8.454570 ACTTCAATTTTTGCAAAGAAATCCAT 57.545 26.923 12.41 0.00 0.00 3.41
2793 3088 7.862512 ACTTCAATTTTTGCAAAGAAATCCA 57.137 28.000 12.41 0.00 0.00 3.41
2794 3089 9.571810 AAAACTTCAATTTTTGCAAAGAAATCC 57.428 25.926 12.41 0.00 0.00 3.01
2797 3092 9.609950 CAGAAAACTTCAATTTTTGCAAAGAAA 57.390 25.926 12.41 5.34 31.90 2.52
2798 3093 8.997323 TCAGAAAACTTCAATTTTTGCAAAGAA 58.003 25.926 12.41 11.09 31.90 2.52
2799 3094 8.545229 TCAGAAAACTTCAATTTTTGCAAAGA 57.455 26.923 12.41 8.58 31.90 2.52
2800 3095 9.269415 CTTCAGAAAACTTCAATTTTTGCAAAG 57.731 29.630 12.41 1.01 31.90 2.77
2801 3096 8.235905 CCTTCAGAAAACTTCAATTTTTGCAAA 58.764 29.630 8.05 8.05 31.90 3.68
2802 3097 7.605691 TCCTTCAGAAAACTTCAATTTTTGCAA 59.394 29.630 0.00 0.00 31.90 4.08
2803 3098 7.102346 TCCTTCAGAAAACTTCAATTTTTGCA 58.898 30.769 0.00 0.00 31.90 4.08
2804 3099 7.538303 TCCTTCAGAAAACTTCAATTTTTGC 57.462 32.000 0.00 0.00 31.90 3.68
2805 3100 9.369904 TCTTCCTTCAGAAAACTTCAATTTTTG 57.630 29.630 0.00 0.00 32.88 2.44
2806 3101 9.942850 TTCTTCCTTCAGAAAACTTCAATTTTT 57.057 25.926 0.00 0.00 32.88 1.94
2808 3103 9.538508 CATTCTTCCTTCAGAAAACTTCAATTT 57.461 29.630 0.00 0.00 36.36 1.82
2809 3104 8.917088 TCATTCTTCCTTCAGAAAACTTCAATT 58.083 29.630 0.00 0.00 36.36 2.32
2810 3105 8.469309 TCATTCTTCCTTCAGAAAACTTCAAT 57.531 30.769 0.00 0.00 36.36 2.57
2811 3106 7.880160 TCATTCTTCCTTCAGAAAACTTCAA 57.120 32.000 0.00 0.00 36.36 2.69
2812 3107 7.880160 TTCATTCTTCCTTCAGAAAACTTCA 57.120 32.000 0.00 0.00 36.36 3.02
2815 3110 9.579932 ACTAATTCATTCTTCCTTCAGAAAACT 57.420 29.630 0.00 0.00 36.36 2.66
2824 3119 9.533831 ACCATTGTAACTAATTCATTCTTCCTT 57.466 29.630 0.00 0.00 0.00 3.36
2837 3132 9.051679 CCATCGATCAAATACCATTGTAACTAA 57.948 33.333 0.00 0.00 0.00 2.24
2838 3133 8.208224 ACCATCGATCAAATACCATTGTAACTA 58.792 33.333 0.00 0.00 0.00 2.24
2839 3134 7.012327 CACCATCGATCAAATACCATTGTAACT 59.988 37.037 0.00 0.00 0.00 2.24
2840 3135 7.132213 CACCATCGATCAAATACCATTGTAAC 58.868 38.462 0.00 0.00 0.00 2.50
2841 3136 6.826231 ACACCATCGATCAAATACCATTGTAA 59.174 34.615 0.00 0.00 0.00 2.41
2842 3137 6.353323 ACACCATCGATCAAATACCATTGTA 58.647 36.000 0.00 0.00 0.00 2.41
2843 3138 5.192927 ACACCATCGATCAAATACCATTGT 58.807 37.500 0.00 0.00 0.00 2.71
2844 3139 5.528690 AGACACCATCGATCAAATACCATTG 59.471 40.000 0.00 0.00 0.00 2.82
2845 3140 5.684704 AGACACCATCGATCAAATACCATT 58.315 37.500 0.00 0.00 0.00 3.16
2846 3141 5.070981 AGAGACACCATCGATCAAATACCAT 59.929 40.000 0.00 0.00 0.00 3.55
2847 3142 4.405680 AGAGACACCATCGATCAAATACCA 59.594 41.667 0.00 0.00 0.00 3.25
2848 3143 4.950050 AGAGACACCATCGATCAAATACC 58.050 43.478 0.00 0.00 0.00 2.73
2849 3144 6.740110 AGTAGAGACACCATCGATCAAATAC 58.260 40.000 0.00 0.00 0.00 1.89
2850 3145 6.961360 AGTAGAGACACCATCGATCAAATA 57.039 37.500 0.00 0.00 0.00 1.40
2851 3146 5.860941 AGTAGAGACACCATCGATCAAAT 57.139 39.130 0.00 0.00 0.00 2.32
2852 3147 5.047306 ACAAGTAGAGACACCATCGATCAAA 60.047 40.000 0.00 0.00 0.00 2.69
2853 3148 4.462834 ACAAGTAGAGACACCATCGATCAA 59.537 41.667 0.00 0.00 0.00 2.57
2854 3149 4.017126 ACAAGTAGAGACACCATCGATCA 58.983 43.478 0.00 0.00 0.00 2.92
2855 3150 4.336993 AGACAAGTAGAGACACCATCGATC 59.663 45.833 0.00 0.00 0.00 3.69
2856 3151 4.097135 CAGACAAGTAGAGACACCATCGAT 59.903 45.833 0.00 0.00 0.00 3.59
2857 3152 3.440522 CAGACAAGTAGAGACACCATCGA 59.559 47.826 0.00 0.00 0.00 3.59
2858 3153 3.440522 TCAGACAAGTAGAGACACCATCG 59.559 47.826 0.00 0.00 0.00 3.84
2859 3154 5.392767 TTCAGACAAGTAGAGACACCATC 57.607 43.478 0.00 0.00 0.00 3.51
2860 3155 5.481824 TGATTCAGACAAGTAGAGACACCAT 59.518 40.000 0.00 0.00 0.00 3.55
2861 3156 4.832823 TGATTCAGACAAGTAGAGACACCA 59.167 41.667 0.00 0.00 0.00 4.17
2862 3157 5.392767 TGATTCAGACAAGTAGAGACACC 57.607 43.478 0.00 0.00 0.00 4.16
2863 3158 7.715265 TTTTGATTCAGACAAGTAGAGACAC 57.285 36.000 0.00 0.00 0.00 3.67
2864 3159 9.996554 TTATTTTGATTCAGACAAGTAGAGACA 57.003 29.630 0.00 0.00 0.00 3.41
2882 3177 9.621629 ACCGATACCACTAATTCATTATTTTGA 57.378 29.630 0.00 0.00 0.00 2.69
2889 3184 8.098912 GGGTAATACCGATACCACTAATTCATT 58.901 37.037 3.01 0.00 43.83 2.57
2890 3185 7.456902 AGGGTAATACCGATACCACTAATTCAT 59.543 37.037 3.01 0.00 43.83 2.57
2891 3186 6.783977 AGGGTAATACCGATACCACTAATTCA 59.216 38.462 3.01 0.00 43.83 2.57
2892 3187 7.237209 AGGGTAATACCGATACCACTAATTC 57.763 40.000 3.01 0.00 43.83 2.17
2893 3188 7.622502 AAGGGTAATACCGATACCACTAATT 57.377 36.000 3.01 0.00 43.83 1.40
2894 3189 7.622502 AAAGGGTAATACCGATACCACTAAT 57.377 36.000 3.01 0.00 43.83 1.73
2895 3190 8.546083 TTAAAGGGTAATACCGATACCACTAA 57.454 34.615 3.01 0.00 43.83 2.24
2896 3191 8.004215 TCTTAAAGGGTAATACCGATACCACTA 58.996 37.037 3.01 0.00 43.83 2.74
2897 3192 6.840705 TCTTAAAGGGTAATACCGATACCACT 59.159 38.462 3.01 0.00 43.83 4.00
2898 3193 7.054491 TCTTAAAGGGTAATACCGATACCAC 57.946 40.000 3.01 0.00 43.83 4.16
2899 3194 7.564660 TCTTCTTAAAGGGTAATACCGATACCA 59.435 37.037 3.01 0.00 43.83 3.25
2900 3195 7.955918 TCTTCTTAAAGGGTAATACCGATACC 58.044 38.462 3.01 0.00 39.83 2.73
2901 3196 9.822185 TTTCTTCTTAAAGGGTAATACCGATAC 57.178 33.333 3.01 0.00 39.83 2.24
2937 3232 4.270102 CGCGTGCAATTTTTGTCATTTTT 58.730 34.783 0.00 0.00 0.00 1.94
2938 3233 3.303001 CCGCGTGCAATTTTTGTCATTTT 60.303 39.130 4.92 0.00 0.00 1.82
2939 3234 2.220593 CCGCGTGCAATTTTTGTCATTT 59.779 40.909 4.92 0.00 0.00 2.32
2940 3235 1.791785 CCGCGTGCAATTTTTGTCATT 59.208 42.857 4.92 0.00 0.00 2.57
2941 3236 1.269517 ACCGCGTGCAATTTTTGTCAT 60.270 42.857 4.92 0.00 0.00 3.06
2942 3237 0.101399 ACCGCGTGCAATTTTTGTCA 59.899 45.000 4.92 0.00 0.00 3.58
2943 3238 1.204792 AACCGCGTGCAATTTTTGTC 58.795 45.000 4.92 0.00 0.00 3.18
2944 3239 1.325943 CAAACCGCGTGCAATTTTTGT 59.674 42.857 4.92 0.00 0.00 2.83
2945 3240 1.915110 GCAAACCGCGTGCAATTTTTG 60.915 47.619 14.51 8.63 41.80 2.44
2946 3241 0.303191 GCAAACCGCGTGCAATTTTT 59.697 45.000 14.51 0.00 41.80 1.94
2947 3242 1.930825 GCAAACCGCGTGCAATTTT 59.069 47.368 14.51 0.00 41.80 1.82
2948 3243 3.623993 GCAAACCGCGTGCAATTT 58.376 50.000 14.51 0.18 41.80 1.82
2953 3248 0.109964 TTTCTATGCAAACCGCGTGC 60.110 50.000 12.75 12.75 46.97 5.34
2954 3249 2.542766 ATTTCTATGCAAACCGCGTG 57.457 45.000 4.92 0.00 46.97 5.34
2955 3250 3.498082 GAAATTTCTATGCAAACCGCGT 58.502 40.909 11.05 0.00 46.97 6.01
2956 3251 2.525891 CGAAATTTCTATGCAAACCGCG 59.474 45.455 15.92 0.00 46.97 6.46
2957 3252 2.278875 GCGAAATTTCTATGCAAACCGC 59.721 45.455 15.92 7.15 42.89 5.68
2958 3253 3.758300 AGCGAAATTTCTATGCAAACCG 58.242 40.909 15.92 0.85 0.00 4.44
2959 3254 6.466308 AAAAGCGAAATTTCTATGCAAACC 57.534 33.333 15.92 0.00 0.00 3.27
2987 3282 8.875803 CAACATTTGTGCTTATTCTTGCATATT 58.124 29.630 0.00 0.00 41.45 1.28
2988 3283 8.252417 TCAACATTTGTGCTTATTCTTGCATAT 58.748 29.630 0.00 0.00 41.45 1.78
2989 3284 7.600960 TCAACATTTGTGCTTATTCTTGCATA 58.399 30.769 0.00 0.00 41.45 3.14
2990 3285 6.457355 TCAACATTTGTGCTTATTCTTGCAT 58.543 32.000 0.00 0.00 41.45 3.96
2991 3286 5.840715 TCAACATTTGTGCTTATTCTTGCA 58.159 33.333 0.00 0.00 36.79 4.08
2992 3287 6.768029 TTCAACATTTGTGCTTATTCTTGC 57.232 33.333 0.00 0.00 0.00 4.01
2995 3290 9.545105 TGAAATTTCAACATTTGTGCTTATTCT 57.455 25.926 18.45 0.00 33.55 2.40
2996 3291 9.584839 GTGAAATTTCAACATTTGTGCTTATTC 57.415 29.630 22.07 0.55 39.21 1.75
2997 3292 8.558700 GGTGAAATTTCAACATTTGTGCTTATT 58.441 29.630 27.51 0.00 44.23 1.40
2998 3293 7.173047 GGGTGAAATTTCAACATTTGTGCTTAT 59.827 33.333 31.65 0.00 46.59 1.73
2999 3294 6.481644 GGGTGAAATTTCAACATTTGTGCTTA 59.518 34.615 31.65 0.22 46.59 3.09
3000 3295 5.296531 GGGTGAAATTTCAACATTTGTGCTT 59.703 36.000 31.65 0.00 46.59 3.91
3001 3296 4.815846 GGGTGAAATTTCAACATTTGTGCT 59.184 37.500 31.65 0.00 46.59 4.40
3002 3297 4.574013 TGGGTGAAATTTCAACATTTGTGC 59.426 37.500 31.65 16.35 46.59 4.57
3003 3298 6.674694 TTGGGTGAAATTTCAACATTTGTG 57.325 33.333 31.65 0.00 46.59 3.33
3004 3299 7.693969 TTTTGGGTGAAATTTCAACATTTGT 57.306 28.000 31.65 0.00 46.59 2.83
3041 3336 8.557450 ACCAATACCACTAATTCATTCCTACTT 58.443 33.333 0.00 0.00 0.00 2.24
3042 3337 8.102484 ACCAATACCACTAATTCATTCCTACT 57.898 34.615 0.00 0.00 0.00 2.57
3048 3343 9.582648 GGGTAATACCAATACCACTAATTCATT 57.417 33.333 12.03 0.00 43.83 2.57
3049 3344 8.955794 AGGGTAATACCAATACCACTAATTCAT 58.044 33.333 12.03 0.00 43.83 2.57
3050 3345 8.339720 AGGGTAATACCAATACCACTAATTCA 57.660 34.615 12.03 0.00 43.83 2.57
3055 3350 9.504705 TCTTTAAGGGTAATACCAATACCACTA 57.495 33.333 12.03 0.00 43.83 2.74
3056 3351 8.396619 TCTTTAAGGGTAATACCAATACCACT 57.603 34.615 12.03 0.00 43.83 4.00
3057 3352 9.117183 CTTCTTTAAGGGTAATACCAATACCAC 57.883 37.037 12.03 0.00 43.83 4.16
3058 3353 9.060137 TCTTCTTTAAGGGTAATACCAATACCA 57.940 33.333 12.03 0.00 43.83 3.25
3059 3354 9.910267 TTCTTCTTTAAGGGTAATACCAATACC 57.090 33.333 12.03 0.00 41.02 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.