Multiple sequence alignment - TraesCS1D01G298400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G298400 chr1D 100.000 7108 0 0 1 7108 397071417 397078524 0.000000e+00 13127.0
1 TraesCS1D01G298400 chr1D 87.119 295 37 1 6811 7104 465969462 465969168 4.110000e-87 333.0
2 TraesCS1D01G298400 chr1D 100.000 28 0 0 6722 6749 156123854 156123881 1.300000e-02 52.8
3 TraesCS1D01G298400 chr1A 93.823 3254 156 30 1866 5103 494443770 494446994 0.000000e+00 4854.0
4 TraesCS1D01G298400 chr1A 91.610 1764 84 28 5100 6836 494447046 494448772 0.000000e+00 2379.0
5 TraesCS1D01G298400 chr1A 90.632 950 56 12 941 1867 494442749 494443688 0.000000e+00 1230.0
6 TraesCS1D01G298400 chr1A 86.986 584 36 11 13 587 494441563 494442115 7.830000e-174 621.0
7 TraesCS1D01G298400 chr1A 90.823 316 17 4 611 925 494442104 494442408 5.130000e-111 412.0
8 TraesCS1D01G298400 chr1A 85.666 293 37 4 1 289 576315602 576315311 3.220000e-78 303.0
9 TraesCS1D01G298400 chr1A 81.410 312 55 2 6794 7104 58706384 58706693 1.180000e-62 252.0
10 TraesCS1D01G298400 chr1A 87.097 155 18 2 6563 6717 82652276 82652428 2.640000e-39 174.0
11 TraesCS1D01G298400 chr1B 95.693 2577 90 14 1650 4211 532165846 532168416 0.000000e+00 4124.0
12 TraesCS1D01G298400 chr1B 94.388 980 41 5 5599 6565 532169914 532170892 0.000000e+00 1493.0
13 TraesCS1D01G298400 chr1B 92.031 916 53 12 731 1634 532164819 532165726 0.000000e+00 1269.0
14 TraesCS1D01G298400 chr1B 92.610 866 56 7 4240 5103 532168412 532169271 0.000000e+00 1238.0
15 TraesCS1D01G298400 chr1B 93.088 217 10 3 5263 5474 532169525 532169741 5.350000e-81 313.0
16 TraesCS1D01G298400 chr1B 83.051 295 49 1 6811 7104 647635982 647636276 4.230000e-67 267.0
17 TraesCS1D01G298400 chr1B 84.000 275 23 9 326 587 532164470 532164736 1.980000e-60 244.0
18 TraesCS1D01G298400 chr1B 81.119 286 52 2 6820 7104 30009744 30009460 1.990000e-55 228.0
19 TraesCS1D01G298400 chr2B 86.767 1534 139 30 3973 5474 612070822 612069321 0.000000e+00 1650.0
20 TraesCS1D01G298400 chr2B 86.767 1534 139 30 3973 5474 612077138 612075637 0.000000e+00 1650.0
21 TraesCS1D01G298400 chr2B 84.605 773 75 29 5603 6365 612069231 612068493 0.000000e+00 728.0
22 TraesCS1D01G298400 chr2B 84.605 773 75 29 5603 6365 612075547 612074809 0.000000e+00 728.0
23 TraesCS1D01G298400 chrUn 100.000 388 0 0 2753 3140 480370236 480369849 0.000000e+00 717.0
24 TraesCS1D01G298400 chr7D 85.223 291 31 8 1 286 553811276 553810993 9.020000e-74 289.0
25 TraesCS1D01G298400 chr7D 88.079 151 16 2 6563 6713 281757848 281757700 2.040000e-40 178.0
26 TraesCS1D01G298400 chr3B 83.168 303 46 4 6805 7104 661739472 661739772 9.090000e-69 272.0
27 TraesCS1D01G298400 chr3B 82.993 294 49 1 6812 7104 228492083 228492376 1.520000e-66 265.0
28 TraesCS1D01G298400 chr3B 83.275 287 43 4 6821 7104 661772522 661772806 7.070000e-65 259.0
29 TraesCS1D01G298400 chr3B 82.051 312 48 4 6794 7104 758373378 758373074 7.070000e-65 259.0
30 TraesCS1D01G298400 chr3B 81.553 309 30 15 1 289 793347986 793348287 5.550000e-56 230.0
31 TraesCS1D01G298400 chr3B 78.142 366 72 7 6747 7104 799741970 799742335 7.170000e-55 226.0
32 TraesCS1D01G298400 chr7B 83.051 295 49 1 6811 7104 15800387 15800681 4.230000e-67 267.0
33 TraesCS1D01G298400 chr7B 80.465 215 25 12 84 288 64898341 64898134 1.600000e-31 148.0
34 TraesCS1D01G298400 chr5D 82.428 313 48 6 6795 7104 125996114 125996422 4.230000e-67 267.0
35 TraesCS1D01G298400 chr5D 90.141 142 13 1 6563 6704 425429251 425429111 4.380000e-42 183.0
36 TraesCS1D01G298400 chr5D 87.417 151 18 1 6563 6713 289513914 289514063 9.480000e-39 172.0
37 TraesCS1D01G298400 chr5D 87.417 151 18 1 6563 6713 422483511 422483660 9.480000e-39 172.0
38 TraesCS1D01G298400 chr2D 82.609 299 47 4 6809 7104 31991564 31991860 7.070000e-65 259.0
39 TraesCS1D01G298400 chr7A 80.969 289 29 15 1 286 592200325 592200590 9.350000e-49 206.0
40 TraesCS1D01G298400 chr7A 83.254 209 29 5 38 242 526619229 526619435 3.390000e-43 187.0
41 TraesCS1D01G298400 chr7A 87.582 153 18 1 6563 6715 627249651 627249802 7.330000e-40 176.0
42 TraesCS1D01G298400 chr5A 84.834 211 25 7 70 275 631309753 631309961 9.350000e-49 206.0
43 TraesCS1D01G298400 chr3D 88.079 151 17 1 6563 6713 267491839 267491690 2.040000e-40 178.0
44 TraesCS1D01G298400 chr3D 77.358 265 35 11 2 263 433619241 433618999 4.470000e-27 134.0
45 TraesCS1D01G298400 chr3A 87.417 151 19 0 6563 6713 279724949 279725099 2.640000e-39 174.0
46 TraesCS1D01G298400 chr5B 79.781 183 21 8 7 184 659464849 659464678 1.250000e-22 119.0
47 TraesCS1D01G298400 chr4A 84.211 114 8 5 7 116 641608825 641608718 1.260000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G298400 chr1D 397071417 397078524 7107 False 13127.000000 13127 100.000000 1 7108 1 chr1D.!!$F2 7107
1 TraesCS1D01G298400 chr1A 494441563 494448772 7209 False 1899.200000 4854 90.774800 13 6836 5 chr1A.!!$F3 6823
2 TraesCS1D01G298400 chr1B 532164470 532170892 6422 False 1446.833333 4124 91.968333 326 6565 6 chr1B.!!$F2 6239
3 TraesCS1D01G298400 chr2B 612068493 612077138 8645 True 1189.000000 1650 85.686000 3973 6365 4 chr2B.!!$R1 2392

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
595 617 0.034477 CCAGGCCGTGGGATACTTTT 60.034 55.000 12.13 0.00 43.63 2.27 F
1815 2298 0.107017 GGCAGTGCAGATACCACCAT 60.107 55.000 18.61 0.00 33.75 3.55 F
3576 4153 1.982223 GAGATCGATCGCCAGATTTCG 59.018 52.381 19.33 0.00 37.19 3.46 F
4489 5089 0.535797 TGCTGAGCTCAGAGATGGTG 59.464 55.000 41.20 18.14 46.59 4.17 F
5493 6241 0.388659 GCCCAAAACACTGCACATCA 59.611 50.000 0.00 0.00 0.00 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2121 2692 0.518355 CACGTGACATAAAAGCCGCG 60.518 55.0 10.90 0.0 38.34 6.46 R
3803 4380 0.892814 GCCTTCTATCCTGCCCATGC 60.893 60.0 0.00 0.0 38.26 4.06 R
5134 5873 0.332972 AACTGAGAGGGGCCATTTCC 59.667 55.0 4.39 0.0 0.00 3.13 R
5663 12722 0.106868 CATTGCCTGAGCCTCCATCA 60.107 55.0 0.00 0.0 38.69 3.07 R
6991 14091 0.041135 CGCTCTATCTTCGGACGGAC 60.041 60.0 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.129638 GCAAGATTGACTCGACCTCTACT 59.870 47.826 0.00 0.00 0.00 2.57
39 40 2.975489 ACCTCTACTATGGCAAGGATGG 59.025 50.000 7.62 4.31 0.00 3.51
57 58 6.560361 AGGATGGTGATGATGAGTAGTCTAT 58.440 40.000 0.00 0.00 0.00 1.98
58 59 6.436847 AGGATGGTGATGATGAGTAGTCTATG 59.563 42.308 0.00 0.00 0.00 2.23
61 62 7.423844 TGGTGATGATGAGTAGTCTATGTTT 57.576 36.000 0.00 0.00 0.00 2.83
62 63 8.533569 TGGTGATGATGAGTAGTCTATGTTTA 57.466 34.615 0.00 0.00 0.00 2.01
64 65 8.851145 GGTGATGATGAGTAGTCTATGTTTAGA 58.149 37.037 0.00 0.00 31.89 2.10
182 184 3.068590 TCGGTCGAAACTAGGTTGAACTT 59.931 43.478 0.00 0.00 0.00 2.66
183 185 4.278170 TCGGTCGAAACTAGGTTGAACTTA 59.722 41.667 0.00 0.00 0.00 2.24
184 186 4.383948 CGGTCGAAACTAGGTTGAACTTAC 59.616 45.833 0.00 0.00 0.00 2.34
185 187 5.291971 GGTCGAAACTAGGTTGAACTTACA 58.708 41.667 0.00 0.00 0.00 2.41
202 204 9.906660 TGAACTTACACATATTTGATTTTCACC 57.093 29.630 0.00 0.00 0.00 4.02
205 207 9.747898 ACTTACACATATTTGATTTTCACCCTA 57.252 29.630 0.00 0.00 0.00 3.53
242 244 5.894807 CGGTTAGGTCCGTCTAAATCTTAA 58.105 41.667 0.00 0.00 44.77 1.85
245 247 6.704937 GGTTAGGTCCGTCTAAATCTTAATGG 59.295 42.308 0.00 0.00 31.85 3.16
246 248 7.418254 GGTTAGGTCCGTCTAAATCTTAATGGA 60.418 40.741 0.00 0.00 31.85 3.41
247 249 6.163135 AGGTCCGTCTAAATCTTAATGGAG 57.837 41.667 0.00 0.00 0.00 3.86
248 250 5.661759 AGGTCCGTCTAAATCTTAATGGAGT 59.338 40.000 0.00 0.00 0.00 3.85
249 251 6.837568 AGGTCCGTCTAAATCTTAATGGAGTA 59.162 38.462 0.00 0.00 0.00 2.59
250 252 7.343833 AGGTCCGTCTAAATCTTAATGGAGTAA 59.656 37.037 0.00 0.00 0.00 2.24
251 253 7.983484 GGTCCGTCTAAATCTTAATGGAGTAAA 59.017 37.037 0.00 0.00 0.00 2.01
252 254 9.374838 GTCCGTCTAAATCTTAATGGAGTAAAA 57.625 33.333 0.00 0.00 0.00 1.52
253 255 9.947433 TCCGTCTAAATCTTAATGGAGTAAAAA 57.053 29.630 0.00 0.00 0.00 1.94
286 289 0.249363 GTTTACTCGGCGGATCCTCC 60.249 60.000 11.05 11.05 0.00 4.30
309 312 3.584733 AGGATCAGTTAGAAATGCCCC 57.415 47.619 0.00 0.00 0.00 5.80
310 313 2.158755 AGGATCAGTTAGAAATGCCCCG 60.159 50.000 0.00 0.00 0.00 5.73
311 314 2.158813 GGATCAGTTAGAAATGCCCCGA 60.159 50.000 0.00 0.00 0.00 5.14
312 315 2.691409 TCAGTTAGAAATGCCCCGAG 57.309 50.000 0.00 0.00 0.00 4.63
313 316 1.209504 TCAGTTAGAAATGCCCCGAGG 59.790 52.381 0.00 0.00 0.00 4.63
314 317 1.209504 CAGTTAGAAATGCCCCGAGGA 59.790 52.381 0.00 0.00 33.47 3.71
315 318 1.913419 AGTTAGAAATGCCCCGAGGAA 59.087 47.619 0.00 0.00 33.47 3.36
316 319 2.092914 AGTTAGAAATGCCCCGAGGAAG 60.093 50.000 0.00 0.00 33.47 3.46
317 320 1.580059 TAGAAATGCCCCGAGGAAGT 58.420 50.000 0.00 0.00 33.47 3.01
318 321 0.035056 AGAAATGCCCCGAGGAAGTG 60.035 55.000 0.00 0.00 33.47 3.16
319 322 0.035439 GAAATGCCCCGAGGAAGTGA 60.035 55.000 0.00 0.00 33.47 3.41
320 323 0.035056 AAATGCCCCGAGGAAGTGAG 60.035 55.000 0.00 0.00 33.47 3.51
340 343 6.380560 AGTGAGAGTACTTACCCAGGTTTATC 59.619 42.308 0.00 0.00 33.87 1.75
421 433 2.836360 TGGATCCCTCGCCGGTAC 60.836 66.667 9.90 0.00 0.00 3.34
447 459 2.668550 GCGGCCTCGTTCCAAGTT 60.669 61.111 0.00 0.00 38.89 2.66
449 461 1.597027 CGGCCTCGTTCCAAGTTGT 60.597 57.895 0.00 0.00 0.00 3.32
549 569 2.543067 AATCTGGCCGGTTGGAGCTC 62.543 60.000 12.43 4.71 37.49 4.09
565 586 1.592223 CTCGACAGAGTTGGGGGAC 59.408 63.158 0.00 0.00 39.60 4.46
579 601 3.652581 GGGACCTCCACTTTTCCAG 57.347 57.895 0.00 0.00 37.91 3.86
580 602 0.038310 GGGACCTCCACTTTTCCAGG 59.962 60.000 0.00 0.00 37.91 4.45
581 603 0.609406 GGACCTCCACTTTTCCAGGC 60.609 60.000 0.00 0.00 35.64 4.85
582 604 0.609406 GACCTCCACTTTTCCAGGCC 60.609 60.000 0.00 0.00 0.00 5.19
583 605 1.675641 CCTCCACTTTTCCAGGCCG 60.676 63.158 0.00 0.00 0.00 6.13
584 606 1.073199 CTCCACTTTTCCAGGCCGT 59.927 57.895 0.00 0.00 0.00 5.68
585 607 1.228124 TCCACTTTTCCAGGCCGTG 60.228 57.895 0.00 0.00 0.00 4.94
593 615 3.320359 CCAGGCCGTGGGATACTT 58.680 61.111 12.13 0.00 43.63 2.24
594 616 1.607612 CCAGGCCGTGGGATACTTT 59.392 57.895 12.13 0.00 43.63 2.66
595 617 0.034477 CCAGGCCGTGGGATACTTTT 60.034 55.000 12.13 0.00 43.63 2.27
596 618 1.615919 CCAGGCCGTGGGATACTTTTT 60.616 52.381 12.13 0.00 43.63 1.94
641 663 0.916086 TATTCTGGGCCGAATGTGGT 59.084 50.000 24.30 9.08 35.40 4.16
649 671 1.798087 CCGAATGTGGTAAACGGCC 59.202 57.895 0.00 0.00 37.32 6.13
681 703 2.477863 CGCACCCTTAGCAAAATAGCAC 60.478 50.000 0.00 0.00 36.85 4.40
721 743 0.894141 CAGGTCCTGGTGAGTGAGAG 59.106 60.000 11.46 0.00 0.00 3.20
722 744 0.252012 AGGTCCTGGTGAGTGAGAGG 60.252 60.000 0.00 0.00 0.00 3.69
723 745 0.251832 GGTCCTGGTGAGTGAGAGGA 60.252 60.000 0.00 0.00 31.93 3.71
725 747 1.076438 TCCTGGTGAGTGAGAGGAGA 58.924 55.000 0.00 0.00 30.81 3.71
727 749 1.548809 CCTGGTGAGTGAGAGGAGACA 60.549 57.143 0.00 0.00 0.00 3.41
728 750 1.818060 CTGGTGAGTGAGAGGAGACAG 59.182 57.143 0.00 0.00 0.00 3.51
906 929 1.894978 CGTCCCCAAATCCAAACCCAT 60.895 52.381 0.00 0.00 0.00 4.00
942 965 0.107508 CACATTCCCCACTCGCATCT 60.108 55.000 0.00 0.00 0.00 2.90
1134 1501 2.415491 GCTCCTTTATGACGTTTTGCCC 60.415 50.000 0.00 0.00 0.00 5.36
1140 1507 1.244019 ATGACGTTTTGCCCCTCTGC 61.244 55.000 0.00 0.00 0.00 4.26
1144 1511 4.284550 TTTTGCCCCTCTGCCGCT 62.285 61.111 0.00 0.00 0.00 5.52
1244 1611 2.264794 GACGACCTCCGCAACCAT 59.735 61.111 0.00 0.00 43.32 3.55
1295 1662 2.689034 CCCGCCTCCCTTTCTCCT 60.689 66.667 0.00 0.00 0.00 3.69
1341 1708 1.909287 TCGATTCGGTGGTGACCCA 60.909 57.895 6.18 0.00 39.39 4.51
1350 1718 2.035632 GGTGGTGACCCATTTTGTTGA 58.964 47.619 0.00 0.00 44.35 3.18
1485 1853 4.960866 GGGTTCACCGGGCCGTTT 62.961 66.667 26.32 8.53 36.71 3.60
1619 1987 3.252215 TCTGGTTTTATGCCGTTCAGTTG 59.748 43.478 0.00 0.00 0.00 3.16
1636 2004 6.673154 TCAGTTGATGTGATTCATGATGTC 57.327 37.500 0.00 0.00 36.83 3.06
1687 2166 5.880887 GGTCAGAAATTATCGGAAAGTTCCT 59.119 40.000 8.41 0.00 45.33 3.36
1718 2197 2.704572 AGCATTTCTCTTTCTCGTGGG 58.295 47.619 0.00 0.00 0.00 4.61
1782 2263 3.528597 AAGAGAGATAAACTGTCGCCC 57.471 47.619 0.00 0.00 42.68 6.13
1815 2298 0.107017 GGCAGTGCAGATACCACCAT 60.107 55.000 18.61 0.00 33.75 3.55
1820 2303 4.454678 CAGTGCAGATACCACCATAATGT 58.545 43.478 0.00 0.00 33.75 2.71
1909 2475 2.557924 TGCAGCCAATTTAACTGACCAG 59.442 45.455 3.83 0.00 33.10 4.00
1955 2521 3.087031 AGGCATGTGAAATCCTTGTCAG 58.913 45.455 0.00 0.00 0.00 3.51
2121 2692 2.045926 CACTACTGCCCTGCCACC 60.046 66.667 0.00 0.00 0.00 4.61
2196 2767 5.309806 ACCTACTGGTTCAGTTTATCCAACT 59.690 40.000 5.86 0.00 46.05 3.16
2259 2830 2.912956 AGGAAGCCTCTTCCATGTTGTA 59.087 45.455 23.04 0.00 41.00 2.41
2261 2832 3.629398 GGAAGCCTCTTCCATGTTGTATG 59.371 47.826 18.00 0.00 38.45 2.39
2414 2991 5.335897 CCCAAGAACTGTGGATGTTATTGTG 60.336 44.000 11.29 0.00 41.92 3.33
2547 3124 7.224949 GGTTAGTTTATCTACTGCCTTCACATC 59.775 40.741 0.00 0.00 0.00 3.06
3260 3837 4.106029 TCAAGACCGAGTTGCTATACAC 57.894 45.455 0.00 0.00 0.00 2.90
3576 4153 1.982223 GAGATCGATCGCCAGATTTCG 59.018 52.381 19.33 0.00 37.19 3.46
3742 4319 6.327934 CAAGGTCTTTTGATAAAGCAGGATG 58.672 40.000 0.00 0.00 40.47 3.51
4096 4692 3.295973 TGCTTTGTTGGTAGCCTTTTCT 58.704 40.909 0.00 0.00 36.56 2.52
4109 4705 5.726980 AGCCTTTTCTATTGCATGTGAAA 57.273 34.783 0.00 0.00 0.00 2.69
4111 4707 6.704310 AGCCTTTTCTATTGCATGTGAAAAT 58.296 32.000 16.19 5.25 37.64 1.82
4112 4708 7.839907 AGCCTTTTCTATTGCATGTGAAAATA 58.160 30.769 16.19 0.00 37.64 1.40
4124 4724 8.914328 TGCATGTGAAAATATTCATGTGTTAG 57.086 30.769 13.43 0.00 46.67 2.34
4140 4740 5.989477 TGTGTTAGCATAATACTCCTGCTT 58.011 37.500 1.21 0.00 43.44 3.91
4229 4829 9.574516 GAATGGGTATTGTTCTATTTATCCTGT 57.425 33.333 0.00 0.00 0.00 4.00
4248 4848 6.548321 TCCTGTAAAATACTTTGGGTGTCAT 58.452 36.000 0.00 0.00 0.00 3.06
4372 4972 2.610727 GGAGTCGCCTGCCATAGAATAC 60.611 54.545 0.00 0.00 0.00 1.89
4398 4998 7.826260 AGGAAAACAACAATGTGTGTAAAAG 57.174 32.000 0.00 0.00 40.60 2.27
4404 5004 8.633075 AACAACAATGTGTGTAAAAGAATGAG 57.367 30.769 0.00 0.00 40.60 2.90
4414 5014 8.507249 GTGTGTAAAAGAATGAGTCATTAGCTT 58.493 33.333 18.28 14.65 33.90 3.74
4489 5089 0.535797 TGCTGAGCTCAGAGATGGTG 59.464 55.000 41.20 18.14 46.59 4.17
4564 5164 2.744202 GGTTGTCAGTGCCTCATACTTG 59.256 50.000 0.00 0.00 0.00 3.16
4565 5165 2.099141 TGTCAGTGCCTCATACTTGC 57.901 50.000 0.00 0.00 0.00 4.01
4566 5166 1.347378 TGTCAGTGCCTCATACTTGCA 59.653 47.619 0.00 0.00 0.00 4.08
4611 5211 1.927174 CTTCCAATTACTGCGAGGACG 59.073 52.381 0.00 0.00 42.93 4.79
4686 5286 4.634004 CACGAGGTATTTTGCTCCATACAA 59.366 41.667 0.00 0.00 0.00 2.41
4712 5312 5.475564 TCCAATTACCAAAGCAAGTTACCTC 59.524 40.000 0.00 0.00 0.00 3.85
4728 5328 7.648039 AGTTACCTCCAACAACTATCTAGAG 57.352 40.000 0.00 0.00 30.89 2.43
4734 5334 6.183360 CCTCCAACAACTATCTAGAGAAGCAT 60.183 42.308 0.00 0.00 0.00 3.79
4735 5335 7.187824 TCCAACAACTATCTAGAGAAGCATT 57.812 36.000 0.00 0.00 0.00 3.56
4759 5359 6.380995 TGTGCTTGTGATGCTTGTTTATAAG 58.619 36.000 0.00 0.00 0.00 1.73
4764 5364 9.443283 GCTTGTGATGCTTGTTTATAAGATTAG 57.557 33.333 0.00 0.00 0.00 1.73
4824 5424 5.615289 AGTTTGAAAGATAGCAGACACAGT 58.385 37.500 0.00 0.00 0.00 3.55
4828 5428 6.096673 TGAAAGATAGCAGACACAGTACAA 57.903 37.500 0.00 0.00 0.00 2.41
4834 5434 4.732285 AGCAGACACAGTACAATTTTCG 57.268 40.909 0.00 0.00 0.00 3.46
4884 5484 8.177119 TGTATCTTGTTGCAGGTTCTTAAAAT 57.823 30.769 0.00 0.00 0.00 1.82
4968 5568 2.844072 GAAGACCGTGAGCAGAGGGC 62.844 65.000 0.00 0.00 45.30 5.19
5025 5625 5.994054 GTGCAGATGGTGATAATGTAGATGT 59.006 40.000 0.00 0.00 0.00 3.06
5103 5703 5.506317 GCTTTATGCAGTGTCAAGTGTTCTT 60.506 40.000 0.00 0.00 42.31 2.52
5104 5704 6.449635 TTTATGCAGTGTCAAGTGTTCTTT 57.550 33.333 0.00 0.00 0.00 2.52
5134 5873 8.438676 AGAACCGAGTCATCCTTTTTAATATG 57.561 34.615 0.00 0.00 0.00 1.78
5149 5888 3.532641 AATATGGAAATGGCCCCTCTC 57.467 47.619 0.00 0.00 0.00 3.20
5150 5889 1.905839 TATGGAAATGGCCCCTCTCA 58.094 50.000 0.00 0.00 0.00 3.27
5161 5901 1.202940 GCCCCTCTCAGTTGGACTTTT 60.203 52.381 0.00 0.00 0.00 2.27
5205 5945 8.198109 TCTATTTAACTGTAGTCCTGAGAATGC 58.802 37.037 0.00 0.00 0.00 3.56
5227 5967 9.559958 AATGCGAGTTATTTTGTTAGAGAATTG 57.440 29.630 0.00 0.00 0.00 2.32
5244 5984 0.926293 TTGAACTCCATCCATCCCCC 59.074 55.000 0.00 0.00 0.00 5.40
5247 5987 1.570979 GAACTCCATCCATCCCCCTTT 59.429 52.381 0.00 0.00 0.00 3.11
5253 5993 3.916349 TCCATCCATCCCCCTTTATGTAG 59.084 47.826 0.00 0.00 0.00 2.74
5254 5994 3.562176 CCATCCATCCCCCTTTATGTAGC 60.562 52.174 0.00 0.00 0.00 3.58
5259 5999 3.375647 TCCCCCTTTATGTAGCCAAAC 57.624 47.619 0.00 0.00 0.00 2.93
5267 6007 6.027749 CCTTTATGTAGCCAAACGAATGTTC 58.972 40.000 0.00 0.00 37.31 3.18
5275 6015 3.836949 CCAAACGAATGTTCAATGGAGG 58.163 45.455 0.00 0.00 36.14 4.30
5341 6088 6.980978 TCCAATCAGAACGAAGATAGAACATC 59.019 38.462 0.00 0.00 0.00 3.06
5348 6095 4.673441 ACGAAGATAGAACATCAACTCCG 58.327 43.478 0.00 0.00 0.00 4.63
5365 6112 3.510360 ACTCCGCTTTACAGAGCTTTAGA 59.490 43.478 0.00 0.00 40.52 2.10
5479 6227 3.464878 TGGTATGCCAAAAGCCCAA 57.535 47.368 0.00 0.00 42.83 4.12
5481 6229 2.050144 TGGTATGCCAAAAGCCCAAAA 58.950 42.857 0.00 0.00 42.83 2.44
5493 6241 0.388659 GCCCAAAACACTGCACATCA 59.611 50.000 0.00 0.00 0.00 3.07
5499 6247 3.358707 AAACACTGCACATCACACATG 57.641 42.857 0.00 0.00 0.00 3.21
5612 12671 6.283694 TCTTGAATACTATGTCCTCATGTGC 58.716 40.000 0.00 0.00 35.70 4.57
5635 12694 5.119434 GCTTTTTCTGTACTCTTCCTCTTCG 59.881 44.000 0.00 0.00 0.00 3.79
5663 12722 0.887933 GCAACGACCCAATGGATGTT 59.112 50.000 0.00 0.00 34.41 2.71
5718 12777 4.288105 AGGATGTTTCTTCACAGAGGTCAT 59.712 41.667 0.00 0.00 0.00 3.06
5761 12820 6.960992 GCAAAATTTGAACCTTCTTGTTTGAC 59.039 34.615 10.26 0.00 0.00 3.18
5988 13057 3.492102 TCAGGGTTTTCTTCAGTGAGG 57.508 47.619 0.00 0.00 0.00 3.86
5989 13058 1.882623 CAGGGTTTTCTTCAGTGAGGC 59.117 52.381 0.00 0.00 0.00 4.70
6002 13073 1.204941 AGTGAGGCACCGATACACTTC 59.795 52.381 0.00 0.00 38.41 3.01
6012 13083 4.804139 CACCGATACACTTCGCTTCTTTAT 59.196 41.667 0.00 0.00 37.80 1.40
6019 13090 5.360591 ACACTTCGCTTCTTTATATCTGGG 58.639 41.667 0.00 0.00 0.00 4.45
6198 13269 1.561542 TGAATTCCTGGAGAGGCTTCC 59.438 52.381 2.27 8.30 39.57 3.46
6218 13289 2.224606 CCTGAAACTCTGCATGTGTGT 58.775 47.619 0.00 0.00 0.00 3.72
6338 13415 7.806180 AGTGCTATTTAGTCCCTGATTATGTT 58.194 34.615 0.00 0.00 0.00 2.71
6426 13503 1.843368 ATGGCTTGATCTGTTGGTGG 58.157 50.000 0.00 0.00 0.00 4.61
6504 13593 5.567423 GCCAAAATCTTGTAATCTTGCCAGT 60.567 40.000 0.00 0.00 0.00 4.00
6510 13599 1.009829 GTAATCTTGCCAGTGCCTCG 58.990 55.000 0.00 0.00 36.33 4.63
6543 13632 5.979517 GCACAGATCTTGCCATTTTATTACC 59.020 40.000 15.07 0.00 33.58 2.85
6657 13746 7.588497 AAAAATCCTACAGTTTTCTCTTGCT 57.412 32.000 0.00 0.00 0.00 3.91
6659 13748 4.273148 TCCTACAGTTTTCTCTTGCTCC 57.727 45.455 0.00 0.00 0.00 4.70
6660 13749 3.646162 TCCTACAGTTTTCTCTTGCTCCA 59.354 43.478 0.00 0.00 0.00 3.86
6662 13751 5.006386 CCTACAGTTTTCTCTTGCTCCATT 58.994 41.667 0.00 0.00 0.00 3.16
6663 13752 5.123027 CCTACAGTTTTCTCTTGCTCCATTC 59.877 44.000 0.00 0.00 0.00 2.67
6732 13821 3.645884 TCTTGTCCTAGTACAAACGCAC 58.354 45.455 2.29 0.00 38.81 5.34
6735 13824 0.388907 TCCTAGTACAAACGCACGCC 60.389 55.000 0.00 0.00 0.00 5.68
6755 13844 1.501741 CCACAACACACATAGGCGC 59.498 57.895 0.00 0.00 0.00 6.53
6789 13878 1.099879 CCATCCCTAGCACTGCAAGC 61.100 60.000 3.30 2.71 37.60 4.01
6791 13880 1.617018 ATCCCTAGCACTGCAAGCGA 61.617 55.000 3.30 0.00 37.60 4.93
6792 13881 1.153289 CCCTAGCACTGCAAGCGAT 60.153 57.895 3.30 0.00 37.60 4.58
6816 13916 1.064505 CTTGAACATGCCATCGCGAAT 59.935 47.619 15.24 0.00 38.08 3.34
6819 13919 2.287644 TGAACATGCCATCGCGAATAAG 59.712 45.455 15.24 2.96 38.08 1.73
6826 13926 2.205074 CCATCGCGAATAAGTGAAGCT 58.795 47.619 15.24 0.00 34.06 3.74
6836 13936 6.304882 CGAATAAGTGAAGCTGCATATGATG 58.695 40.000 6.97 0.00 0.00 3.07
6837 13937 6.146673 CGAATAAGTGAAGCTGCATATGATGA 59.853 38.462 6.97 0.00 0.00 2.92
6838 13938 7.307573 CGAATAAGTGAAGCTGCATATGATGAA 60.308 37.037 6.97 0.00 0.00 2.57
6839 13939 5.496133 AAGTGAAGCTGCATATGATGAAC 57.504 39.130 6.97 0.00 0.00 3.18
6840 13940 3.881688 AGTGAAGCTGCATATGATGAACC 59.118 43.478 6.97 0.00 0.00 3.62
6841 13941 2.874086 TGAAGCTGCATATGATGAACCG 59.126 45.455 6.97 0.00 0.00 4.44
6842 13942 2.627515 AGCTGCATATGATGAACCGT 57.372 45.000 6.97 0.00 0.00 4.83
6843 13943 2.216046 AGCTGCATATGATGAACCGTG 58.784 47.619 6.97 0.00 0.00 4.94
6844 13944 1.265095 GCTGCATATGATGAACCGTGG 59.735 52.381 6.97 0.00 0.00 4.94
6845 13945 1.875514 CTGCATATGATGAACCGTGGG 59.124 52.381 6.97 0.00 0.00 4.61
6846 13946 0.593128 GCATATGATGAACCGTGGGC 59.407 55.000 6.97 0.00 0.00 5.36
6847 13947 1.815408 GCATATGATGAACCGTGGGCT 60.815 52.381 6.97 0.00 0.00 5.19
6848 13948 2.575532 CATATGATGAACCGTGGGCTT 58.424 47.619 0.00 0.00 0.00 4.35
6849 13949 2.325583 TATGATGAACCGTGGGCTTC 57.674 50.000 0.00 0.00 0.00 3.86
6850 13950 0.327924 ATGATGAACCGTGGGCTTCA 59.672 50.000 0.00 0.00 31.38 3.02
6851 13951 0.109532 TGATGAACCGTGGGCTTCAA 59.890 50.000 0.00 0.00 30.92 2.69
6852 13952 0.804989 GATGAACCGTGGGCTTCAAG 59.195 55.000 0.00 0.00 30.92 3.02
6854 13954 2.597510 AACCGTGGGCTTCAAGGC 60.598 61.111 1.26 1.26 46.89 4.35
6886 13986 2.386661 AAAGGGATGACACTGTAGCG 57.613 50.000 0.00 0.00 0.00 4.26
6887 13987 0.108138 AAGGGATGACACTGTAGCGC 60.108 55.000 0.00 0.00 0.00 5.92
6888 13988 1.521681 GGGATGACACTGTAGCGCC 60.522 63.158 2.29 0.00 0.00 6.53
6889 13989 1.878522 GGATGACACTGTAGCGCCG 60.879 63.158 2.29 0.00 0.00 6.46
6890 13990 2.509336 ATGACACTGTAGCGCCGC 60.509 61.111 2.29 0.00 0.00 6.53
6891 13991 4.735132 TGACACTGTAGCGCCGCC 62.735 66.667 4.98 0.00 0.00 6.13
6892 13992 4.735132 GACACTGTAGCGCCGCCA 62.735 66.667 4.98 0.00 0.00 5.69
6893 13993 4.082523 ACACTGTAGCGCCGCCAT 62.083 61.111 4.98 0.00 0.00 4.40
6894 13994 3.264897 CACTGTAGCGCCGCCATC 61.265 66.667 4.98 0.00 0.00 3.51
6895 13995 4.873129 ACTGTAGCGCCGCCATCG 62.873 66.667 4.98 0.00 0.00 3.84
6903 14003 4.654412 GCCGCCATCGCTCGATCT 62.654 66.667 1.30 0.00 31.62 2.75
6904 14004 2.732468 CCGCCATCGCTCGATCTG 60.732 66.667 1.30 0.00 31.62 2.90
6905 14005 2.332869 CGCCATCGCTCGATCTGA 59.667 61.111 1.30 0.00 31.62 3.27
6907 14007 1.372748 GCCATCGCTCGATCTGAGG 60.373 63.158 13.84 2.30 45.38 3.86
6908 14008 1.800283 GCCATCGCTCGATCTGAGGA 61.800 60.000 13.84 10.43 45.38 3.71
6909 14009 0.887247 CCATCGCTCGATCTGAGGAT 59.113 55.000 13.84 11.71 45.38 3.24
6910 14010 2.087646 CCATCGCTCGATCTGAGGATA 58.912 52.381 13.84 0.00 45.38 2.59
6911 14011 2.097304 CCATCGCTCGATCTGAGGATAG 59.903 54.545 13.84 6.79 45.38 2.08
6912 14012 2.841442 TCGCTCGATCTGAGGATAGA 57.159 50.000 13.84 0.00 45.38 1.98
6913 14013 2.694213 TCGCTCGATCTGAGGATAGAG 58.306 52.381 13.84 10.33 46.98 2.43
6914 14014 2.037902 TCGCTCGATCTGAGGATAGAGT 59.962 50.000 14.22 0.00 46.40 3.24
6915 14015 2.811431 CGCTCGATCTGAGGATAGAGTT 59.189 50.000 14.22 0.00 46.40 3.01
6916 14016 3.252215 CGCTCGATCTGAGGATAGAGTTT 59.748 47.826 14.22 0.00 46.40 2.66
6917 14017 4.261405 CGCTCGATCTGAGGATAGAGTTTT 60.261 45.833 14.22 0.00 46.40 2.43
6918 14018 5.596845 GCTCGATCTGAGGATAGAGTTTTT 58.403 41.667 14.22 0.00 46.40 1.94
6919 14019 5.689961 GCTCGATCTGAGGATAGAGTTTTTC 59.310 44.000 14.22 0.00 46.40 2.29
6920 14020 6.460953 GCTCGATCTGAGGATAGAGTTTTTCT 60.461 42.308 14.22 0.00 46.40 2.52
6921 14021 7.411486 TCGATCTGAGGATAGAGTTTTTCTT 57.589 36.000 0.00 0.00 37.36 2.52
6922 14022 7.261325 TCGATCTGAGGATAGAGTTTTTCTTG 58.739 38.462 0.00 0.00 37.36 3.02
6923 14023 6.478344 CGATCTGAGGATAGAGTTTTTCTTGG 59.522 42.308 0.00 0.00 37.36 3.61
6924 14024 6.935240 TCTGAGGATAGAGTTTTTCTTGGA 57.065 37.500 0.00 0.00 37.36 3.53
6925 14025 6.940739 TCTGAGGATAGAGTTTTTCTTGGAG 58.059 40.000 0.00 0.00 37.36 3.86
6926 14026 5.491982 TGAGGATAGAGTTTTTCTTGGAGC 58.508 41.667 0.00 0.00 37.36 4.70
6927 14027 5.013079 TGAGGATAGAGTTTTTCTTGGAGCA 59.987 40.000 0.00 0.00 37.36 4.26
6928 14028 5.880901 AGGATAGAGTTTTTCTTGGAGCAA 58.119 37.500 0.00 0.00 37.36 3.91
6929 14029 6.488715 AGGATAGAGTTTTTCTTGGAGCAAT 58.511 36.000 0.00 0.00 37.36 3.56
6930 14030 7.633789 AGGATAGAGTTTTTCTTGGAGCAATA 58.366 34.615 0.00 0.00 37.36 1.90
6931 14031 7.554476 AGGATAGAGTTTTTCTTGGAGCAATAC 59.446 37.037 0.00 0.00 37.36 1.89
6932 14032 5.613358 AGAGTTTTTCTTGGAGCAATACG 57.387 39.130 0.00 0.00 29.61 3.06
6933 14033 5.305585 AGAGTTTTTCTTGGAGCAATACGA 58.694 37.500 0.00 0.00 29.61 3.43
6934 14034 5.179555 AGAGTTTTTCTTGGAGCAATACGAC 59.820 40.000 0.00 0.00 29.61 4.34
6935 14035 4.084013 AGTTTTTCTTGGAGCAATACGACG 60.084 41.667 0.00 0.00 0.00 5.12
6936 14036 2.004583 TTCTTGGAGCAATACGACGG 57.995 50.000 0.00 0.00 0.00 4.79
6937 14037 1.179152 TCTTGGAGCAATACGACGGA 58.821 50.000 0.00 0.00 0.00 4.69
6938 14038 1.135199 TCTTGGAGCAATACGACGGAC 60.135 52.381 0.00 0.00 0.00 4.79
6939 14039 0.604073 TTGGAGCAATACGACGGACA 59.396 50.000 0.00 0.00 0.00 4.02
6940 14040 0.604073 TGGAGCAATACGACGGACAA 59.396 50.000 0.00 0.00 0.00 3.18
6941 14041 1.206132 TGGAGCAATACGACGGACAAT 59.794 47.619 0.00 0.00 0.00 2.71
6942 14042 1.593006 GGAGCAATACGACGGACAATG 59.407 52.381 0.00 0.00 0.00 2.82
6943 14043 2.536365 GAGCAATACGACGGACAATGA 58.464 47.619 0.00 0.00 0.00 2.57
6944 14044 2.535984 GAGCAATACGACGGACAATGAG 59.464 50.000 0.00 0.00 0.00 2.90
6945 14045 2.165641 AGCAATACGACGGACAATGAGA 59.834 45.455 0.00 0.00 0.00 3.27
6946 14046 2.535984 GCAATACGACGGACAATGAGAG 59.464 50.000 0.00 0.00 0.00 3.20
6947 14047 2.493713 ATACGACGGACAATGAGAGC 57.506 50.000 0.00 0.00 0.00 4.09
6948 14048 0.454600 TACGACGGACAATGAGAGCC 59.545 55.000 0.00 0.00 0.00 4.70
6951 14051 3.786101 CGGACAATGAGAGCCGTG 58.214 61.111 0.00 0.00 38.99 4.94
6952 14052 1.215382 CGGACAATGAGAGCCGTGA 59.785 57.895 0.00 0.00 38.99 4.35
6953 14053 1.078759 CGGACAATGAGAGCCGTGAC 61.079 60.000 0.00 0.00 38.99 3.67
6954 14054 1.078759 GGACAATGAGAGCCGTGACG 61.079 60.000 0.00 0.00 0.00 4.35
6955 14055 0.109272 GACAATGAGAGCCGTGACGA 60.109 55.000 6.54 0.00 0.00 4.20
6956 14056 0.388649 ACAATGAGAGCCGTGACGAC 60.389 55.000 6.54 0.00 0.00 4.34
6957 14057 1.154016 AATGAGAGCCGTGACGACG 60.154 57.895 6.54 0.00 45.67 5.12
6958 14058 3.685214 ATGAGAGCCGTGACGACGC 62.685 63.158 6.54 1.54 44.68 5.19
6961 14061 4.719369 GAGCCGTGACGACGCCTT 62.719 66.667 6.54 0.00 44.68 4.35
6962 14062 4.295119 AGCCGTGACGACGCCTTT 62.295 61.111 6.54 0.00 44.68 3.11
6963 14063 2.431260 GCCGTGACGACGCCTTTA 60.431 61.111 6.54 0.00 44.68 1.85
6964 14064 2.023223 GCCGTGACGACGCCTTTAA 61.023 57.895 6.54 0.00 44.68 1.52
6965 14065 1.952266 GCCGTGACGACGCCTTTAAG 61.952 60.000 6.54 0.00 44.68 1.85
6966 14066 0.387622 CCGTGACGACGCCTTTAAGA 60.388 55.000 6.54 0.00 44.68 2.10
6967 14067 1.411394 CGTGACGACGCCTTTAAGAA 58.589 50.000 0.00 0.00 39.10 2.52
6968 14068 1.385743 CGTGACGACGCCTTTAAGAAG 59.614 52.381 0.00 0.00 39.10 2.85
6982 14082 5.391312 TTTAAGAAGGGAATGAGCTTTGC 57.609 39.130 0.00 0.00 0.00 3.68
6983 14083 2.895242 AGAAGGGAATGAGCTTTGCT 57.105 45.000 0.00 0.00 43.88 3.91
6984 14084 2.444421 AGAAGGGAATGAGCTTTGCTG 58.556 47.619 0.00 0.00 39.88 4.41
6985 14085 0.893447 AAGGGAATGAGCTTTGCTGC 59.107 50.000 0.00 0.00 39.88 5.25
6986 14086 0.969409 AGGGAATGAGCTTTGCTGCC 60.969 55.000 0.00 0.00 39.88 4.85
6987 14087 1.138247 GGAATGAGCTTTGCTGCCG 59.862 57.895 0.00 0.00 39.88 5.69
6988 14088 1.515736 GAATGAGCTTTGCTGCCGC 60.516 57.895 0.00 0.00 39.88 6.53
6989 14089 2.879039 GAATGAGCTTTGCTGCCGCC 62.879 60.000 0.00 0.00 39.88 6.13
7009 14109 0.311477 GGTCCGTCCGAAGATAGAGC 59.689 60.000 0.00 0.00 0.00 4.09
7010 14110 0.041135 GTCCGTCCGAAGATAGAGCG 60.041 60.000 0.00 0.00 0.00 5.03
7011 14111 1.164662 TCCGTCCGAAGATAGAGCGG 61.165 60.000 0.00 0.00 46.08 5.52
7012 14112 1.283181 CGTCCGAAGATAGAGCGGG 59.717 63.158 0.00 0.00 44.87 6.13
7013 14113 1.445716 CGTCCGAAGATAGAGCGGGT 61.446 60.000 0.00 0.00 44.87 5.28
7014 14114 0.745468 GTCCGAAGATAGAGCGGGTT 59.255 55.000 0.00 0.00 44.87 4.11
7015 14115 1.136500 GTCCGAAGATAGAGCGGGTTT 59.864 52.381 0.00 0.00 44.87 3.27
7016 14116 1.829222 TCCGAAGATAGAGCGGGTTTT 59.171 47.619 0.00 0.00 44.87 2.43
7017 14117 2.159142 TCCGAAGATAGAGCGGGTTTTC 60.159 50.000 0.00 0.00 44.87 2.29
7018 14118 2.418197 CCGAAGATAGAGCGGGTTTTCA 60.418 50.000 0.00 0.00 41.29 2.69
7019 14119 2.603560 CGAAGATAGAGCGGGTTTTCAC 59.396 50.000 0.00 0.00 0.00 3.18
7020 14120 2.693267 AGATAGAGCGGGTTTTCACC 57.307 50.000 0.00 0.00 43.37 4.02
7028 14128 2.360726 GGTTTTCACCCCGGCGAT 60.361 61.111 9.30 0.00 37.03 4.58
7029 14129 2.404186 GGTTTTCACCCCGGCGATC 61.404 63.158 9.30 0.00 37.03 3.69
7030 14130 1.673009 GTTTTCACCCCGGCGATCA 60.673 57.895 9.30 0.00 0.00 2.92
7031 14131 1.673009 TTTTCACCCCGGCGATCAC 60.673 57.895 9.30 0.00 0.00 3.06
7032 14132 2.119484 TTTTCACCCCGGCGATCACT 62.119 55.000 9.30 0.00 0.00 3.41
7033 14133 2.515996 TTTCACCCCGGCGATCACTC 62.516 60.000 9.30 0.00 0.00 3.51
7034 14134 3.770040 CACCCCGGCGATCACTCA 61.770 66.667 9.30 0.00 0.00 3.41
7035 14135 3.771160 ACCCCGGCGATCACTCAC 61.771 66.667 9.30 0.00 0.00 3.51
7036 14136 4.530857 CCCCGGCGATCACTCACC 62.531 72.222 9.30 0.00 0.00 4.02
7037 14137 4.873129 CCCGGCGATCACTCACCG 62.873 72.222 9.30 0.00 44.84 4.94
7041 14141 2.202932 GCGATCACTCACCGCCAT 60.203 61.111 0.00 0.00 42.77 4.40
7042 14142 2.240500 GCGATCACTCACCGCCATC 61.241 63.158 0.00 0.00 42.77 3.51
7043 14143 1.141665 CGATCACTCACCGCCATCA 59.858 57.895 0.00 0.00 0.00 3.07
7044 14144 0.460109 CGATCACTCACCGCCATCAA 60.460 55.000 0.00 0.00 0.00 2.57
7045 14145 1.737838 GATCACTCACCGCCATCAAA 58.262 50.000 0.00 0.00 0.00 2.69
7046 14146 1.398390 GATCACTCACCGCCATCAAAC 59.602 52.381 0.00 0.00 0.00 2.93
7047 14147 0.948623 TCACTCACCGCCATCAAACG 60.949 55.000 0.00 0.00 0.00 3.60
7048 14148 2.325082 ACTCACCGCCATCAAACGC 61.325 57.895 0.00 0.00 0.00 4.84
7049 14149 3.039202 CTCACCGCCATCAAACGCC 62.039 63.158 0.00 0.00 0.00 5.68
7050 14150 3.361158 CACCGCCATCAAACGCCA 61.361 61.111 0.00 0.00 0.00 5.69
7051 14151 3.361977 ACCGCCATCAAACGCCAC 61.362 61.111 0.00 0.00 0.00 5.01
7052 14152 3.361158 CCGCCATCAAACGCCACA 61.361 61.111 0.00 0.00 0.00 4.17
7053 14153 2.699768 CCGCCATCAAACGCCACAT 61.700 57.895 0.00 0.00 0.00 3.21
7054 14154 1.226379 CGCCATCAAACGCCACATC 60.226 57.895 0.00 0.00 0.00 3.06
7055 14155 1.139520 GCCATCAAACGCCACATCC 59.860 57.895 0.00 0.00 0.00 3.51
7056 14156 1.809207 CCATCAAACGCCACATCCC 59.191 57.895 0.00 0.00 0.00 3.85
7057 14157 1.429021 CATCAAACGCCACATCCCG 59.571 57.895 0.00 0.00 0.00 5.14
7058 14158 1.748879 ATCAAACGCCACATCCCGG 60.749 57.895 0.00 0.00 0.00 5.73
7059 14159 4.114997 CAAACGCCACATCCCGGC 62.115 66.667 0.00 0.00 46.62 6.13
7064 14164 3.792736 GCCACATCCCGGCTACCA 61.793 66.667 0.00 0.00 46.56 3.25
7065 14165 2.189521 CCACATCCCGGCTACCAC 59.810 66.667 0.00 0.00 0.00 4.16
7066 14166 2.665089 CCACATCCCGGCTACCACA 61.665 63.158 0.00 0.00 0.00 4.17
7067 14167 1.449601 CACATCCCGGCTACCACAC 60.450 63.158 0.00 0.00 0.00 3.82
7068 14168 2.189521 CATCCCGGCTACCACACC 59.810 66.667 0.00 0.00 0.00 4.16
7075 14175 4.323477 GCTACCACACCGCCCACA 62.323 66.667 0.00 0.00 0.00 4.17
7076 14176 2.358247 CTACCACACCGCCCACAC 60.358 66.667 0.00 0.00 0.00 3.82
7077 14177 4.302509 TACCACACCGCCCACACG 62.303 66.667 0.00 0.00 0.00 4.49
7088 14188 3.069946 CCACACGGCCATGGCAAT 61.070 61.111 36.56 21.89 44.11 3.56
7089 14189 2.491152 CACACGGCCATGGCAATC 59.509 61.111 36.56 19.42 44.11 2.67
7090 14190 3.133464 ACACGGCCATGGCAATCG 61.133 61.111 36.56 30.78 44.11 3.34
7091 14191 2.823593 CACGGCCATGGCAATCGA 60.824 61.111 36.56 0.00 44.11 3.59
7092 14192 2.514592 ACGGCCATGGCAATCGAG 60.515 61.111 36.56 21.16 44.11 4.04
7093 14193 3.957535 CGGCCATGGCAATCGAGC 61.958 66.667 36.56 17.19 44.11 5.03
7094 14194 2.829914 GGCCATGGCAATCGAGCA 60.830 61.111 36.56 0.00 44.11 4.26
7095 14195 2.719979 GCCATGGCAATCGAGCAG 59.280 61.111 32.08 0.00 41.49 4.24
7096 14196 2.719979 CCATGGCAATCGAGCAGC 59.280 61.111 0.00 0.00 35.83 5.25
7097 14197 2.116533 CCATGGCAATCGAGCAGCA 61.117 57.895 0.00 0.00 35.83 4.41
7098 14198 1.063649 CATGGCAATCGAGCAGCAC 59.936 57.895 8.48 0.00 35.83 4.40
7099 14199 2.117156 ATGGCAATCGAGCAGCACC 61.117 57.895 8.48 0.00 35.83 5.01
7100 14200 2.747460 GGCAATCGAGCAGCACCA 60.747 61.111 8.48 0.00 35.83 4.17
7101 14201 2.334946 GGCAATCGAGCAGCACCAA 61.335 57.895 8.48 0.00 35.83 3.67
7102 14202 1.136147 GCAATCGAGCAGCACCAAG 59.864 57.895 0.00 0.00 0.00 3.61
7103 14203 1.136147 CAATCGAGCAGCACCAAGC 59.864 57.895 0.00 0.00 46.19 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.205893 AGGTCGAGTCAATCTTGCCTC 59.794 52.381 0.00 0.00 32.50 4.70
2 3 1.205893 GAGGTCGAGTCAATCTTGCCT 59.794 52.381 0.00 0.00 37.04 4.75
3 4 1.205893 AGAGGTCGAGTCAATCTTGCC 59.794 52.381 0.00 0.00 0.00 4.52
5 6 4.974368 AGTAGAGGTCGAGTCAATCTTG 57.026 45.455 0.00 0.00 0.00 3.02
7 8 5.067273 CCATAGTAGAGGTCGAGTCAATCT 58.933 45.833 0.00 0.00 0.00 2.40
8 9 4.320641 GCCATAGTAGAGGTCGAGTCAATC 60.321 50.000 0.00 0.00 0.00 2.67
9 10 3.570550 GCCATAGTAGAGGTCGAGTCAAT 59.429 47.826 0.00 0.00 0.00 2.57
10 11 2.950309 GCCATAGTAGAGGTCGAGTCAA 59.050 50.000 0.00 0.00 0.00 3.18
11 12 2.092592 TGCCATAGTAGAGGTCGAGTCA 60.093 50.000 0.00 0.00 0.00 3.41
12 13 2.573369 TGCCATAGTAGAGGTCGAGTC 58.427 52.381 0.00 0.00 0.00 3.36
13 14 2.730934 TGCCATAGTAGAGGTCGAGT 57.269 50.000 0.00 0.00 0.00 4.18
14 15 2.294791 CCTTGCCATAGTAGAGGTCGAG 59.705 54.545 0.00 0.00 0.00 4.04
15 16 2.092049 TCCTTGCCATAGTAGAGGTCGA 60.092 50.000 0.00 0.00 0.00 4.20
16 17 2.307768 TCCTTGCCATAGTAGAGGTCG 58.692 52.381 0.00 0.00 0.00 4.79
17 18 3.007398 CCATCCTTGCCATAGTAGAGGTC 59.993 52.174 0.00 0.00 0.00 3.85
18 19 2.975489 CCATCCTTGCCATAGTAGAGGT 59.025 50.000 0.00 0.00 0.00 3.85
26 27 3.395273 TCATCATCACCATCCTTGCCATA 59.605 43.478 0.00 0.00 0.00 2.74
39 40 9.891828 CTCTAAACATAGACTACTCATCATCAC 57.108 37.037 0.00 0.00 0.00 3.06
97 98 5.868801 CACATTGTCTTGACAACCAAACTTT 59.131 36.000 17.02 0.00 33.76 2.66
103 104 3.064682 CGAACACATTGTCTTGACAACCA 59.935 43.478 17.02 0.00 31.89 3.67
199 201 7.899648 AACCGATCTCCTATATAATAGGGTG 57.100 40.000 12.03 6.78 35.45 4.61
202 204 9.287373 GACCTAACCGATCTCCTATATAATAGG 57.713 40.741 6.63 6.63 36.06 2.57
242 244 9.047947 ACTCTTAGTGAGGTATTTTTACTCCAT 57.952 33.333 0.00 0.00 46.72 3.41
249 251 9.420551 CGAGTAAACTCTTAGTGAGGTATTTTT 57.579 33.333 8.41 0.00 42.96 1.94
250 252 8.033626 CCGAGTAAACTCTTAGTGAGGTATTTT 58.966 37.037 8.41 0.00 42.96 1.82
251 253 7.545489 CCGAGTAAACTCTTAGTGAGGTATTT 58.455 38.462 8.41 0.00 42.96 1.40
252 254 6.405619 GCCGAGTAAACTCTTAGTGAGGTATT 60.406 42.308 8.41 0.00 42.96 1.89
253 255 5.067544 GCCGAGTAAACTCTTAGTGAGGTAT 59.932 44.000 8.41 0.00 42.96 2.73
254 256 4.397417 GCCGAGTAAACTCTTAGTGAGGTA 59.603 45.833 8.41 0.00 42.96 3.08
255 257 3.193056 GCCGAGTAAACTCTTAGTGAGGT 59.807 47.826 8.41 0.00 46.35 3.85
256 258 3.731264 CGCCGAGTAAACTCTTAGTGAGG 60.731 52.174 8.41 1.88 46.72 3.86
258 260 2.163010 CCGCCGAGTAAACTCTTAGTGA 59.837 50.000 8.41 0.00 40.75 3.41
259 261 2.163010 TCCGCCGAGTAAACTCTTAGTG 59.837 50.000 8.41 4.06 40.75 2.74
260 262 2.440409 TCCGCCGAGTAAACTCTTAGT 58.560 47.619 8.41 0.00 40.75 2.24
261 263 3.550436 GGATCCGCCGAGTAAACTCTTAG 60.550 52.174 8.41 0.00 40.75 2.18
286 289 4.058817 GGGCATTTCTAACTGATCCTACG 58.941 47.826 0.00 0.00 0.00 3.51
309 312 3.377798 GGGTAAGTACTCTCACTTCCTCG 59.622 52.174 0.00 0.00 39.45 4.63
310 313 4.342359 TGGGTAAGTACTCTCACTTCCTC 58.658 47.826 0.00 0.00 39.45 3.71
311 314 4.345854 CTGGGTAAGTACTCTCACTTCCT 58.654 47.826 0.00 0.00 39.45 3.36
312 315 3.447944 CCTGGGTAAGTACTCTCACTTCC 59.552 52.174 0.00 0.00 39.45 3.46
313 316 4.087907 ACCTGGGTAAGTACTCTCACTTC 58.912 47.826 0.00 0.00 39.45 3.01
314 317 4.129317 ACCTGGGTAAGTACTCTCACTT 57.871 45.455 0.00 0.00 41.56 3.16
315 318 3.829728 ACCTGGGTAAGTACTCTCACT 57.170 47.619 0.00 0.00 0.00 3.41
316 319 4.886496 AAACCTGGGTAAGTACTCTCAC 57.114 45.455 0.00 0.00 0.00 3.51
317 320 6.380274 CAGATAAACCTGGGTAAGTACTCTCA 59.620 42.308 0.00 0.00 0.00 3.27
318 321 6.380560 ACAGATAAACCTGGGTAAGTACTCTC 59.619 42.308 0.00 0.00 38.44 3.20
319 322 6.154706 CACAGATAAACCTGGGTAAGTACTCT 59.845 42.308 0.00 0.00 38.44 3.24
320 323 6.338937 CACAGATAAACCTGGGTAAGTACTC 58.661 44.000 0.00 0.00 38.44 2.59
340 343 1.069022 CATCCACGCTTCAAACCACAG 60.069 52.381 0.00 0.00 0.00 3.66
366 375 0.034896 GGGAAGAGGAAGCAACACGA 59.965 55.000 0.00 0.00 0.00 4.35
429 441 3.178540 AACTTGGAACGAGGCCGCT 62.179 57.895 4.53 0.00 39.95 5.52
549 569 1.889530 GAGGTCCCCCAACTCTGTCG 61.890 65.000 0.00 0.00 0.00 4.35
565 586 1.675641 CGGCCTGGAAAAGTGGAGG 60.676 63.158 0.00 0.00 0.00 4.30
577 599 1.834188 AAAAAGTATCCCACGGCCTG 58.166 50.000 0.00 0.00 0.00 4.85
596 618 1.480498 GCCTGGACCCCTCAAGAAAAA 60.480 52.381 0.00 0.00 0.00 1.94
597 619 0.112412 GCCTGGACCCCTCAAGAAAA 59.888 55.000 0.00 0.00 0.00 2.29
598 620 1.767692 GCCTGGACCCCTCAAGAAA 59.232 57.895 0.00 0.00 0.00 2.52
599 621 2.231380 GGCCTGGACCCCTCAAGAA 61.231 63.158 0.00 0.00 0.00 2.52
600 622 2.610859 GGCCTGGACCCCTCAAGA 60.611 66.667 0.00 0.00 0.00 3.02
601 623 4.101448 CGGCCTGGACCCCTCAAG 62.101 72.222 0.00 0.00 0.00 3.02
602 624 4.974438 ACGGCCTGGACCCCTCAA 62.974 66.667 0.00 0.00 0.00 3.02
607 629 2.604299 GAATACCACGGCCTGGACCC 62.604 65.000 23.24 9.03 43.95 4.46
608 630 1.153229 GAATACCACGGCCTGGACC 60.153 63.158 23.24 0.00 43.95 4.46
609 631 0.462047 CAGAATACCACGGCCTGGAC 60.462 60.000 23.24 13.01 43.95 4.02
610 632 1.622607 CCAGAATACCACGGCCTGGA 61.623 60.000 23.24 10.58 45.35 3.86
641 663 2.184836 CCCATCGACGGCCGTTTA 59.815 61.111 34.65 23.68 39.75 2.01
667 689 1.099689 GGCCGGTGCTATTTTGCTAA 58.900 50.000 1.90 0.00 37.74 3.09
668 690 0.750182 GGGCCGGTGCTATTTTGCTA 60.750 55.000 1.90 0.00 37.74 3.49
704 726 0.251832 TCCTCTCACTCACCAGGACC 60.252 60.000 0.00 0.00 29.57 4.46
716 738 0.628522 CCTCTCCCTGTCTCCTCTCA 59.371 60.000 0.00 0.00 0.00 3.27
721 743 0.825840 CGGATCCTCTCCCTGTCTCC 60.826 65.000 10.75 0.00 41.49 3.71
722 744 1.460273 GCGGATCCTCTCCCTGTCTC 61.460 65.000 10.75 0.00 41.49 3.36
723 745 1.456705 GCGGATCCTCTCCCTGTCT 60.457 63.158 10.75 0.00 41.49 3.41
725 747 2.444895 GGCGGATCCTCTCCCTGT 60.445 66.667 10.75 0.00 41.49 4.00
727 749 3.765257 CTGGGCGGATCCTCTCCCT 62.765 68.421 25.00 0.00 41.49 4.20
728 750 2.658321 TACTGGGCGGATCCTCTCCC 62.658 65.000 20.68 20.68 41.49 4.30
1119 1486 2.432444 CAGAGGGGCAAAACGTCATAA 58.568 47.619 0.00 0.00 0.00 1.90
1244 1611 3.136123 CGGGCGAGGTCGAGGTTA 61.136 66.667 2.94 0.00 43.02 2.85
1276 1643 2.736826 GGAGAAAGGGAGGCGGGAG 61.737 68.421 0.00 0.00 0.00 4.30
1277 1644 2.687566 GGAGAAAGGGAGGCGGGA 60.688 66.667 0.00 0.00 0.00 5.14
1278 1645 2.689034 AGGAGAAAGGGAGGCGGG 60.689 66.667 0.00 0.00 0.00 6.13
1320 1687 1.804326 GTCACCACCGAATCGACCG 60.804 63.158 3.36 0.00 0.00 4.79
1341 1708 7.065803 CGTATCACCCTACAGATTCAACAAAAT 59.934 37.037 0.00 0.00 0.00 1.82
1350 1718 2.628657 GCTCCGTATCACCCTACAGATT 59.371 50.000 0.00 0.00 0.00 2.40
1485 1853 2.836154 GTGACCCTGTGGAAGCCA 59.164 61.111 0.00 0.00 34.81 4.75
1515 1883 1.412710 GTGCCGATGAAGGAGGACATA 59.587 52.381 0.00 0.00 0.00 2.29
1619 1987 7.704271 ACAAGATTGACATCATGAATCACATC 58.296 34.615 11.52 14.92 37.07 3.06
1655 2133 8.801882 TTCCGATAATTTCTGACCAGTTTAAT 57.198 30.769 0.00 0.00 0.00 1.40
1656 2134 8.624367 TTTCCGATAATTTCTGACCAGTTTAA 57.376 30.769 0.00 0.00 0.00 1.52
1657 2135 7.881232 ACTTTCCGATAATTTCTGACCAGTTTA 59.119 33.333 0.00 0.00 0.00 2.01
1658 2136 6.715264 ACTTTCCGATAATTTCTGACCAGTTT 59.285 34.615 0.00 0.00 0.00 2.66
1659 2137 6.238648 ACTTTCCGATAATTTCTGACCAGTT 58.761 36.000 0.00 0.00 0.00 3.16
1687 2166 7.548097 AGAAAGAGAAATGCTAGAATACGACA 58.452 34.615 0.00 0.00 0.00 4.35
1718 2197 6.647067 CACGATTTCAACCCTAGATCTATTCC 59.353 42.308 2.11 0.00 0.00 3.01
1782 2263 3.936453 TGCACTGCCTTAAACCTAATACG 59.064 43.478 0.00 0.00 0.00 3.06
1815 2298 7.334421 GTCTGAGAAAGCTTAACATCCACATTA 59.666 37.037 0.00 0.00 0.00 1.90
1820 2303 4.997395 GTGTCTGAGAAAGCTTAACATCCA 59.003 41.667 0.00 0.00 0.00 3.41
1909 2475 2.648059 AGCTACACTTGGATTGCCATC 58.352 47.619 0.00 0.00 45.46 3.51
1920 2486 4.466370 TCACATGCCTAGTTAGCTACACTT 59.534 41.667 11.97 0.00 0.00 3.16
1955 2521 4.136796 TGAATTATGTAGATGCTGGCACC 58.863 43.478 0.00 0.00 0.00 5.01
2063 2630 3.240302 GGCCTTACCAGAGAGCCTATTA 58.760 50.000 0.00 0.00 40.57 0.98
2121 2692 0.518355 CACGTGACATAAAAGCCGCG 60.518 55.000 10.90 0.00 38.34 6.46
2196 2767 9.569122 GGAAATAGAACATAAAAGCATACCCTA 57.431 33.333 0.00 0.00 0.00 3.53
2230 2801 3.074390 TGGAAGAGGCTTCCTTGAATCAA 59.926 43.478 22.59 0.00 39.31 2.57
2259 2830 6.835488 TCCTAAGCAATTCAGATTTTAGCCAT 59.165 34.615 0.00 0.00 0.00 4.40
2261 2832 6.699575 TCCTAAGCAATTCAGATTTTAGCC 57.300 37.500 0.00 0.00 0.00 3.93
2414 2991 7.856145 ACAACAATCTACAAGATCATCTTCC 57.144 36.000 0.00 0.00 33.78 3.46
2574 3151 8.585471 AGAAATACAAAACCACATCAGATCAT 57.415 30.769 0.00 0.00 0.00 2.45
3260 3837 4.466828 CAGTTTGCTGTTCCATAACTTCG 58.533 43.478 0.00 0.00 37.92 3.79
3317 3894 5.007039 AGCAATTACACTACATCTCGCATTG 59.993 40.000 0.00 0.00 0.00 2.82
3425 4002 8.899427 TGCAACCAAAAATTATCATCAGAAAA 57.101 26.923 0.00 0.00 0.00 2.29
3576 4153 3.700577 CATCCGTGCAACATGTTCC 57.299 52.632 8.48 0.00 35.74 3.62
3742 4319 3.668447 TCACCATCTTCTTCTTCAGCAC 58.332 45.455 0.00 0.00 0.00 4.40
3803 4380 0.892814 GCCTTCTATCCTGCCCATGC 60.893 60.000 0.00 0.00 38.26 4.06
3887 4464 4.527944 GCCTAGGCTGAATAAGGTTCTTT 58.472 43.478 27.17 0.00 38.26 2.52
4002 4579 0.256752 CAATGATGGAGGCAGTGGGA 59.743 55.000 0.00 0.00 0.00 4.37
4075 4652 3.295973 AGAAAAGGCTACCAACAAAGCA 58.704 40.909 0.00 0.00 40.61 3.91
4083 4679 4.398988 CACATGCAATAGAAAAGGCTACCA 59.601 41.667 0.00 0.00 0.00 3.25
4096 4692 9.872721 AACACATGAATATTTTCACATGCAATA 57.127 25.926 12.45 0.00 44.36 1.90
4111 4707 9.710900 CAGGAGTATTATGCTAACACATGAATA 57.289 33.333 0.00 0.00 0.00 1.75
4112 4708 7.173907 GCAGGAGTATTATGCTAACACATGAAT 59.826 37.037 0.00 0.00 37.00 2.57
4124 4724 7.445402 TCTTATGGAAAAGCAGGAGTATTATGC 59.555 37.037 0.00 0.00 40.29 3.14
4136 4736 5.260424 TGTGCCTTATCTTATGGAAAAGCA 58.740 37.500 0.00 0.00 0.00 3.91
4140 4740 9.474313 AAACTTATGTGCCTTATCTTATGGAAA 57.526 29.630 0.00 0.00 0.00 3.13
4229 4829 9.535878 GAAAAACATGACACCCAAAGTATTTTA 57.464 29.630 0.00 0.00 35.03 1.52
4296 4896 2.158623 TCACAGTTTCCAATGCAGGACT 60.159 45.455 0.00 0.00 37.42 3.85
4372 4972 7.588143 TTTACACACATTGTTGTTTTCCTTG 57.412 32.000 9.01 0.00 39.91 3.61
4508 5108 5.016173 CCATAAACAAGAAAGGACCCATGA 58.984 41.667 0.00 0.00 0.00 3.07
4543 5143 2.744202 CAAGTATGAGGCACTGACAACC 59.256 50.000 0.00 0.00 41.55 3.77
4564 5164 5.193679 ACCTCCACCAGACTATAAAAATGC 58.806 41.667 0.00 0.00 0.00 3.56
4565 5165 6.766467 GGTACCTCCACCAGACTATAAAAATG 59.234 42.308 4.06 0.00 38.55 2.32
4566 5166 6.896883 GGTACCTCCACCAGACTATAAAAAT 58.103 40.000 4.06 0.00 38.55 1.82
4611 5211 7.484035 AGATAGACGAATTATTGTTTCCAGC 57.516 36.000 0.00 0.00 0.00 4.85
4686 5286 6.697395 GGTAACTTGCTTTGGTAATTGGATT 58.303 36.000 0.00 0.00 0.00 3.01
4712 5312 6.820656 ACAATGCTTCTCTAGATAGTTGTTGG 59.179 38.462 0.00 0.00 0.00 3.77
4734 5334 3.523606 AAACAAGCATCACAAGCACAA 57.476 38.095 0.00 0.00 0.00 3.33
4735 5335 4.852134 ATAAACAAGCATCACAAGCACA 57.148 36.364 0.00 0.00 0.00 4.57
4759 5359 6.764560 TCCAAAAATAGAACGGTAGCCTAATC 59.235 38.462 0.00 0.00 0.00 1.75
4764 5364 5.632244 TTTCCAAAAATAGAACGGTAGCC 57.368 39.130 0.00 0.00 0.00 3.93
4802 5402 5.931441 ACTGTGTCTGCTATCTTTCAAAC 57.069 39.130 0.00 0.00 0.00 2.93
4809 5409 6.311445 CGAAAATTGTACTGTGTCTGCTATCT 59.689 38.462 0.00 0.00 0.00 1.98
4834 5434 8.607459 CAGGTGATGTCACTATATTTTCTCAAC 58.393 37.037 12.43 0.00 45.73 3.18
4848 5448 4.142816 GCAACAAGATACAGGTGATGTCAC 60.143 45.833 4.58 4.58 42.70 3.67
4884 5484 0.671472 CAGTGCAGCCTCGACATCAA 60.671 55.000 0.00 0.00 0.00 2.57
4968 5568 2.866156 TCAGCTTGTTGTTTCTCAGTCG 59.134 45.455 0.00 0.00 0.00 4.18
5007 5607 5.311265 CAGGCACATCTACATTATCACCAT 58.689 41.667 0.00 0.00 0.00 3.55
5103 5703 8.857694 AAAAAGGATGACTCGGTTCTTAATAA 57.142 30.769 0.00 0.00 0.00 1.40
5104 5704 9.947433 TTAAAAAGGATGACTCGGTTCTTAATA 57.053 29.630 0.00 0.00 0.00 0.98
5114 5853 9.669353 CATTTCCATATTAAAAAGGATGACTCG 57.331 33.333 0.00 0.00 0.00 4.18
5134 5873 0.332972 AACTGAGAGGGGCCATTTCC 59.667 55.000 4.39 0.00 0.00 3.13
5161 5901 6.814954 AATAGAGACAGGCTATTTTCTGGA 57.185 37.500 0.00 0.00 35.59 3.86
5227 5967 1.226311 AAGGGGGATGGATGGAGTTC 58.774 55.000 0.00 0.00 0.00 3.01
5244 5984 6.607689 TGAACATTCGTTTGGCTACATAAAG 58.392 36.000 0.00 0.00 34.75 1.85
5247 5987 6.404184 CCATTGAACATTCGTTTGGCTACATA 60.404 38.462 0.00 0.00 34.75 2.29
5253 5993 3.244976 CTCCATTGAACATTCGTTTGGC 58.755 45.455 3.60 0.00 34.75 4.52
5254 5994 3.255642 ACCTCCATTGAACATTCGTTTGG 59.744 43.478 0.00 2.48 34.75 3.28
5259 5999 6.456988 GCTTAGTTACCTCCATTGAACATTCG 60.457 42.308 0.00 0.00 0.00 3.34
5267 6007 1.940613 GCGGCTTAGTTACCTCCATTG 59.059 52.381 0.00 0.00 0.00 2.82
5275 6015 7.668525 AAATCCTAATATGCGGCTTAGTTAC 57.331 36.000 0.00 0.00 0.00 2.50
5348 6095 7.118390 TCAGTGAAATCTAAAGCTCTGTAAAGC 59.882 37.037 0.00 0.00 42.82 3.51
5474 6222 0.388659 TGATGTGCAGTGTTTTGGGC 59.611 50.000 0.00 0.00 0.00 5.36
5475 6223 1.408340 TGTGATGTGCAGTGTTTTGGG 59.592 47.619 0.00 0.00 0.00 4.12
5476 6224 2.159268 TGTGTGATGTGCAGTGTTTTGG 60.159 45.455 0.00 0.00 0.00 3.28
5477 6225 3.148026 TGTGTGATGTGCAGTGTTTTG 57.852 42.857 0.00 0.00 0.00 2.44
5478 6226 3.130869 ACATGTGTGATGTGCAGTGTTTT 59.869 39.130 0.00 0.00 0.00 2.43
5479 6227 2.689471 ACATGTGTGATGTGCAGTGTTT 59.311 40.909 0.00 0.00 0.00 2.83
5481 6229 1.971481 ACATGTGTGATGTGCAGTGT 58.029 45.000 0.00 0.00 0.00 3.55
5499 6247 6.084277 GCACACCTAGCTAAATGTGTTAAAC 58.916 40.000 26.25 13.43 43.51 2.01
5592 12651 7.559590 AAAAGCACATGAGGACATAGTATTC 57.440 36.000 0.00 0.00 35.09 1.75
5601 12660 4.757149 AGTACAGAAAAAGCACATGAGGAC 59.243 41.667 0.00 0.00 0.00 3.85
5612 12671 5.119434 GCGAAGAGGAAGAGTACAGAAAAAG 59.881 44.000 0.00 0.00 0.00 2.27
5635 12694 3.426568 GGTCGTTGCCAGAGCTGC 61.427 66.667 0.00 0.00 40.80 5.25
5663 12722 0.106868 CATTGCCTGAGCCTCCATCA 60.107 55.000 0.00 0.00 38.69 3.07
5718 12777 2.915349 TGCAAATTTCAGGCAAAGCAA 58.085 38.095 0.00 0.00 34.05 3.91
5761 12820 4.843220 ACAATTCAGCCACAAAGAAGAG 57.157 40.909 0.00 0.00 0.00 2.85
6198 13269 2.224606 ACACACATGCAGAGTTTCAGG 58.775 47.619 0.00 0.00 0.00 3.86
6218 13289 3.829026 AGTACATCAACAGACAGCTCAGA 59.171 43.478 0.00 0.00 0.00 3.27
6543 13632 2.820330 TCAAGGCAAAAGCCTTTTTCG 58.180 42.857 18.41 8.26 46.90 3.46
6639 13728 4.008074 TGGAGCAAGAGAAAACTGTAGG 57.992 45.455 0.00 0.00 0.00 3.18
6645 13734 5.010012 TCAAAGGAATGGAGCAAGAGAAAAC 59.990 40.000 0.00 0.00 0.00 2.43
6720 13809 2.667199 GGGGCGTGCGTTTGTACT 60.667 61.111 0.00 0.00 0.00 2.73
6732 13821 1.302913 TATGTGTGTTGTGGGGGCG 60.303 57.895 0.00 0.00 0.00 6.13
6735 13824 1.305219 CGCCTATGTGTGTTGTGGGG 61.305 60.000 0.00 0.00 0.00 4.96
6755 13844 1.002366 GATGGTGTTGCTACGCTCAG 58.998 55.000 11.51 0.00 35.12 3.35
6762 13851 1.209504 GTGCTAGGGATGGTGTTGCTA 59.790 52.381 0.00 0.00 0.00 3.49
6789 13878 1.667236 TGGCATGTTCAAGGCTATCG 58.333 50.000 0.00 0.00 35.38 2.92
6791 13880 2.224606 CGATGGCATGTTCAAGGCTAT 58.775 47.619 3.81 1.82 39.71 2.97
6792 13881 1.667236 CGATGGCATGTTCAAGGCTA 58.333 50.000 3.81 0.00 35.38 3.93
6816 13916 5.528690 GGTTCATCATATGCAGCTTCACTTA 59.471 40.000 0.00 0.00 0.00 2.24
6819 13919 3.303593 CGGTTCATCATATGCAGCTTCAC 60.304 47.826 0.00 0.00 0.00 3.18
6826 13926 1.965935 CCCACGGTTCATCATATGCA 58.034 50.000 0.00 0.00 0.00 3.96
6836 13936 2.626780 GCCTTGAAGCCCACGGTTC 61.627 63.158 2.05 0.00 45.00 3.62
6837 13937 2.597510 GCCTTGAAGCCCACGGTT 60.598 61.111 2.05 0.00 36.61 4.44
6865 13965 3.074412 CGCTACAGTGTCATCCCTTTTT 58.926 45.455 0.00 0.00 0.00 1.94
6866 13966 2.699954 CGCTACAGTGTCATCCCTTTT 58.300 47.619 0.00 0.00 0.00 2.27
6867 13967 1.676014 GCGCTACAGTGTCATCCCTTT 60.676 52.381 0.00 0.00 0.00 3.11
6868 13968 0.108138 GCGCTACAGTGTCATCCCTT 60.108 55.000 0.00 0.00 0.00 3.95
6869 13969 1.517832 GCGCTACAGTGTCATCCCT 59.482 57.895 0.00 0.00 0.00 4.20
6870 13970 1.521681 GGCGCTACAGTGTCATCCC 60.522 63.158 7.64 0.00 0.00 3.85
6871 13971 1.878522 CGGCGCTACAGTGTCATCC 60.879 63.158 7.64 0.00 0.00 3.51
6872 13972 2.517450 GCGGCGCTACAGTGTCATC 61.517 63.158 26.86 0.00 0.00 2.92
6873 13973 2.509336 GCGGCGCTACAGTGTCAT 60.509 61.111 26.86 0.00 0.00 3.06
6874 13974 4.735132 GGCGGCGCTACAGTGTCA 62.735 66.667 32.30 0.00 0.00 3.58
6875 13975 4.735132 TGGCGGCGCTACAGTGTC 62.735 66.667 32.30 12.78 0.00 3.67
6876 13976 4.082523 ATGGCGGCGCTACAGTGT 62.083 61.111 32.30 7.23 0.00 3.55
6877 13977 3.264897 GATGGCGGCGCTACAGTG 61.265 66.667 32.30 0.00 0.00 3.66
6878 13978 4.873129 CGATGGCGGCGCTACAGT 62.873 66.667 32.30 11.24 0.00 3.55
6886 13986 4.654412 AGATCGAGCGATGGCGGC 62.654 66.667 10.42 0.00 46.35 6.53
6887 13987 2.732468 CAGATCGAGCGATGGCGG 60.732 66.667 10.42 0.00 46.35 6.13
6888 13988 1.728778 CTCAGATCGAGCGATGGCG 60.729 63.158 10.42 0.00 46.35 5.69
6889 13989 1.372748 CCTCAGATCGAGCGATGGC 60.373 63.158 10.42 0.00 40.78 4.40
6890 13990 0.887247 ATCCTCAGATCGAGCGATGG 59.113 55.000 10.42 5.46 40.78 3.51
6891 13991 3.006247 TCTATCCTCAGATCGAGCGATG 58.994 50.000 10.42 0.00 40.78 3.84
6892 13992 3.270027 CTCTATCCTCAGATCGAGCGAT 58.730 50.000 4.89 4.89 40.78 4.58
6893 13993 2.037902 ACTCTATCCTCAGATCGAGCGA 59.962 50.000 0.00 0.00 43.06 4.93
6894 13994 2.422597 ACTCTATCCTCAGATCGAGCG 58.577 52.381 0.00 0.00 43.06 5.03
6895 13995 4.846779 AAACTCTATCCTCAGATCGAGC 57.153 45.455 0.00 0.00 43.06 5.03
6896 13996 7.038154 AGAAAAACTCTATCCTCAGATCGAG 57.962 40.000 7.37 7.37 44.22 4.04
6897 13997 7.261325 CAAGAAAAACTCTATCCTCAGATCGA 58.739 38.462 0.00 0.00 32.46 3.59
6898 13998 6.478344 CCAAGAAAAACTCTATCCTCAGATCG 59.522 42.308 0.00 0.00 32.46 3.69
6899 13999 7.560368 TCCAAGAAAAACTCTATCCTCAGATC 58.440 38.462 0.00 0.00 32.46 2.75
6900 14000 7.502060 TCCAAGAAAAACTCTATCCTCAGAT 57.498 36.000 0.00 0.00 32.46 2.90
6901 14001 6.575254 GCTCCAAGAAAAACTCTATCCTCAGA 60.575 42.308 0.00 0.00 32.46 3.27
6902 14002 5.584251 GCTCCAAGAAAAACTCTATCCTCAG 59.416 44.000 0.00 0.00 32.46 3.35
6903 14003 5.013079 TGCTCCAAGAAAAACTCTATCCTCA 59.987 40.000 0.00 0.00 32.46 3.86
6904 14004 5.491982 TGCTCCAAGAAAAACTCTATCCTC 58.508 41.667 0.00 0.00 32.46 3.71
6905 14005 5.505181 TGCTCCAAGAAAAACTCTATCCT 57.495 39.130 0.00 0.00 32.46 3.24
6906 14006 6.765915 ATTGCTCCAAGAAAAACTCTATCC 57.234 37.500 0.00 0.00 32.46 2.59
6907 14007 7.277981 TCGTATTGCTCCAAGAAAAACTCTATC 59.722 37.037 0.00 0.00 32.46 2.08
6908 14008 7.064728 GTCGTATTGCTCCAAGAAAAACTCTAT 59.935 37.037 0.00 0.00 32.46 1.98
6909 14009 6.367969 GTCGTATTGCTCCAAGAAAAACTCTA 59.632 38.462 0.00 0.00 32.46 2.43
6910 14010 5.179555 GTCGTATTGCTCCAAGAAAAACTCT 59.820 40.000 0.00 0.00 35.13 3.24
6911 14011 5.383130 GTCGTATTGCTCCAAGAAAAACTC 58.617 41.667 0.00 0.00 0.00 3.01
6912 14012 4.084013 CGTCGTATTGCTCCAAGAAAAACT 60.084 41.667 0.00 0.00 0.00 2.66
6913 14013 4.148891 CGTCGTATTGCTCCAAGAAAAAC 58.851 43.478 0.00 0.00 0.00 2.43
6914 14014 3.187637 CCGTCGTATTGCTCCAAGAAAAA 59.812 43.478 0.00 0.00 0.00 1.94
6915 14015 2.739913 CCGTCGTATTGCTCCAAGAAAA 59.260 45.455 0.00 0.00 0.00 2.29
6916 14016 2.028839 TCCGTCGTATTGCTCCAAGAAA 60.029 45.455 0.00 0.00 0.00 2.52
6917 14017 1.546923 TCCGTCGTATTGCTCCAAGAA 59.453 47.619 0.00 0.00 0.00 2.52
6918 14018 1.135199 GTCCGTCGTATTGCTCCAAGA 60.135 52.381 0.00 0.00 0.00 3.02
6919 14019 1.278238 GTCCGTCGTATTGCTCCAAG 58.722 55.000 0.00 0.00 0.00 3.61
6920 14020 0.604073 TGTCCGTCGTATTGCTCCAA 59.396 50.000 0.00 0.00 0.00 3.53
6921 14021 0.604073 TTGTCCGTCGTATTGCTCCA 59.396 50.000 0.00 0.00 0.00 3.86
6922 14022 1.593006 CATTGTCCGTCGTATTGCTCC 59.407 52.381 0.00 0.00 0.00 4.70
6923 14023 2.535984 CTCATTGTCCGTCGTATTGCTC 59.464 50.000 0.00 0.00 0.00 4.26
6924 14024 2.165641 TCTCATTGTCCGTCGTATTGCT 59.834 45.455 0.00 0.00 0.00 3.91
6925 14025 2.535984 CTCTCATTGTCCGTCGTATTGC 59.464 50.000 0.00 0.00 0.00 3.56
6926 14026 2.535984 GCTCTCATTGTCCGTCGTATTG 59.464 50.000 0.00 0.00 0.00 1.90
6927 14027 2.481449 GGCTCTCATTGTCCGTCGTATT 60.481 50.000 0.00 0.00 0.00 1.89
6928 14028 1.067212 GGCTCTCATTGTCCGTCGTAT 59.933 52.381 0.00 0.00 0.00 3.06
6929 14029 0.454600 GGCTCTCATTGTCCGTCGTA 59.545 55.000 0.00 0.00 0.00 3.43
6930 14030 1.215647 GGCTCTCATTGTCCGTCGT 59.784 57.895 0.00 0.00 0.00 4.34
6931 14031 1.874019 CGGCTCTCATTGTCCGTCG 60.874 63.158 0.00 0.00 37.33 5.12
6932 14032 4.094684 CGGCTCTCATTGTCCGTC 57.905 61.111 0.00 0.00 37.33 4.79
6934 14034 1.078759 GTCACGGCTCTCATTGTCCG 61.079 60.000 0.00 0.00 46.61 4.79
6935 14035 1.078759 CGTCACGGCTCTCATTGTCC 61.079 60.000 0.00 0.00 0.00 4.02
6936 14036 0.109272 TCGTCACGGCTCTCATTGTC 60.109 55.000 0.00 0.00 0.00 3.18
6937 14037 0.388649 GTCGTCACGGCTCTCATTGT 60.389 55.000 0.00 0.00 0.00 2.71
6938 14038 1.406219 CGTCGTCACGGCTCTCATTG 61.406 60.000 0.00 0.00 42.73 2.82
6939 14039 1.154016 CGTCGTCACGGCTCTCATT 60.154 57.895 0.00 0.00 42.73 2.57
6940 14040 2.485582 CGTCGTCACGGCTCTCAT 59.514 61.111 0.00 0.00 42.73 2.90
6941 14041 4.400109 GCGTCGTCACGGCTCTCA 62.400 66.667 0.00 0.00 46.80 3.27
6947 14047 0.387622 TCTTAAAGGCGTCGTCACGG 60.388 55.000 0.00 0.00 46.80 4.94
6948 14048 3.791630 CCTTCTTAAAGGCGTCGTCACG 61.792 54.545 0.00 0.00 45.50 4.35
6949 14049 1.725164 CCTTCTTAAAGGCGTCGTCAC 59.275 52.381 0.00 0.00 45.50 3.67
6950 14050 2.074547 CCTTCTTAAAGGCGTCGTCA 57.925 50.000 0.00 0.00 45.50 4.35
6958 14058 7.751724 AGCAAAGCTCATTCCCTTCTTAAAGG 61.752 42.308 0.00 0.00 43.07 3.11
6959 14059 5.184671 AGCAAAGCTCATTCCCTTCTTAAAG 59.815 40.000 0.00 0.00 30.62 1.85
6960 14060 5.047802 CAGCAAAGCTCATTCCCTTCTTAAA 60.048 40.000 0.00 0.00 36.40 1.52
6961 14061 4.460382 CAGCAAAGCTCATTCCCTTCTTAA 59.540 41.667 0.00 0.00 36.40 1.85
6962 14062 4.012374 CAGCAAAGCTCATTCCCTTCTTA 58.988 43.478 0.00 0.00 36.40 2.10
6963 14063 2.824341 CAGCAAAGCTCATTCCCTTCTT 59.176 45.455 0.00 0.00 36.40 2.52
6964 14064 2.444421 CAGCAAAGCTCATTCCCTTCT 58.556 47.619 0.00 0.00 36.40 2.85
6965 14065 1.135170 GCAGCAAAGCTCATTCCCTTC 60.135 52.381 0.00 0.00 36.40 3.46
6966 14066 0.893447 GCAGCAAAGCTCATTCCCTT 59.107 50.000 0.00 0.00 36.40 3.95
6967 14067 0.969409 GGCAGCAAAGCTCATTCCCT 60.969 55.000 0.00 0.00 36.40 4.20
6968 14068 1.514553 GGCAGCAAAGCTCATTCCC 59.485 57.895 0.00 0.00 36.40 3.97
6969 14069 1.138247 CGGCAGCAAAGCTCATTCC 59.862 57.895 0.00 0.00 36.40 3.01
6970 14070 1.515736 GCGGCAGCAAAGCTCATTC 60.516 57.895 3.18 0.00 44.35 2.67
6971 14071 2.570181 GCGGCAGCAAAGCTCATT 59.430 55.556 3.18 0.00 44.35 2.57
6990 14090 0.311477 GCTCTATCTTCGGACGGACC 59.689 60.000 0.00 0.00 0.00 4.46
6991 14091 0.041135 CGCTCTATCTTCGGACGGAC 60.041 60.000 0.00 0.00 0.00 4.79
6992 14092 1.164662 CCGCTCTATCTTCGGACGGA 61.165 60.000 0.00 0.00 45.53 4.69
6993 14093 1.283181 CCGCTCTATCTTCGGACGG 59.717 63.158 0.00 0.00 45.53 4.79
6994 14094 1.283181 CCCGCTCTATCTTCGGACG 59.717 63.158 1.05 0.00 45.53 4.79
6995 14095 0.745468 AACCCGCTCTATCTTCGGAC 59.255 55.000 1.05 0.00 45.53 4.79
6996 14096 1.481871 AAACCCGCTCTATCTTCGGA 58.518 50.000 1.05 0.00 45.53 4.55
6997 14097 2.202566 GAAAACCCGCTCTATCTTCGG 58.797 52.381 0.00 0.00 42.58 4.30
6998 14098 2.603560 GTGAAAACCCGCTCTATCTTCG 59.396 50.000 0.00 0.00 0.00 3.79
6999 14099 2.937149 GGTGAAAACCCGCTCTATCTTC 59.063 50.000 0.00 0.00 0.00 2.87
7000 14100 2.355818 GGGTGAAAACCCGCTCTATCTT 60.356 50.000 0.00 0.00 40.59 2.40
7001 14101 1.209747 GGGTGAAAACCCGCTCTATCT 59.790 52.381 0.00 0.00 40.59 1.98
7002 14102 1.664873 GGGTGAAAACCCGCTCTATC 58.335 55.000 0.00 0.00 40.59 2.08
7003 14103 3.875865 GGGTGAAAACCCGCTCTAT 57.124 52.632 0.00 0.00 40.59 1.98
7011 14111 2.360726 ATCGCCGGGGTGAAAACC 60.361 61.111 19.13 0.00 38.20 3.27
7012 14112 1.673009 TGATCGCCGGGGTGAAAAC 60.673 57.895 19.13 0.00 38.20 2.43
7013 14113 1.673009 GTGATCGCCGGGGTGAAAA 60.673 57.895 19.13 0.00 38.20 2.29
7014 14114 2.046700 GTGATCGCCGGGGTGAAA 60.047 61.111 19.13 0.00 38.20 2.69
7015 14115 3.000819 AGTGATCGCCGGGGTGAA 61.001 61.111 19.13 0.00 38.20 3.18
7016 14116 3.458163 GAGTGATCGCCGGGGTGA 61.458 66.667 19.13 3.04 39.09 4.02
7017 14117 3.770040 TGAGTGATCGCCGGGGTG 61.770 66.667 19.13 0.00 0.00 4.61
7018 14118 3.771160 GTGAGTGATCGCCGGGGT 61.771 66.667 19.13 5.83 0.00 4.95
7019 14119 4.530857 GGTGAGTGATCGCCGGGG 62.531 72.222 13.31 13.31 0.00 5.73
7025 14125 0.460109 TTGATGGCGGTGAGTGATCG 60.460 55.000 0.00 0.00 0.00 3.69
7026 14126 1.398390 GTTTGATGGCGGTGAGTGATC 59.602 52.381 0.00 0.00 0.00 2.92
7027 14127 1.453155 GTTTGATGGCGGTGAGTGAT 58.547 50.000 0.00 0.00 0.00 3.06
7028 14128 0.948623 CGTTTGATGGCGGTGAGTGA 60.949 55.000 0.00 0.00 0.00 3.41
7029 14129 1.497278 CGTTTGATGGCGGTGAGTG 59.503 57.895 0.00 0.00 0.00 3.51
7030 14130 2.325082 GCGTTTGATGGCGGTGAGT 61.325 57.895 0.00 0.00 0.00 3.41
7031 14131 2.480555 GCGTTTGATGGCGGTGAG 59.519 61.111 0.00 0.00 0.00 3.51
7032 14132 3.053291 GGCGTTTGATGGCGGTGA 61.053 61.111 0.00 0.00 0.00 4.02
7033 14133 3.361158 TGGCGTTTGATGGCGGTG 61.361 61.111 0.00 0.00 31.47 4.94
7034 14134 3.361977 GTGGCGTTTGATGGCGGT 61.362 61.111 0.00 0.00 31.47 5.68
7035 14135 2.597117 GATGTGGCGTTTGATGGCGG 62.597 60.000 0.00 0.00 31.47 6.13
7036 14136 1.226379 GATGTGGCGTTTGATGGCG 60.226 57.895 0.00 0.00 31.47 5.69
7037 14137 1.139520 GGATGTGGCGTTTGATGGC 59.860 57.895 0.00 0.00 0.00 4.40
7038 14138 1.809207 GGGATGTGGCGTTTGATGG 59.191 57.895 0.00 0.00 0.00 3.51
7039 14139 1.429021 CGGGATGTGGCGTTTGATG 59.571 57.895 0.00 0.00 0.00 3.07
7040 14140 1.748879 CCGGGATGTGGCGTTTGAT 60.749 57.895 0.00 0.00 0.00 2.57
7041 14141 2.359354 CCGGGATGTGGCGTTTGA 60.359 61.111 0.00 0.00 0.00 2.69
7042 14142 4.114997 GCCGGGATGTGGCGTTTG 62.115 66.667 2.18 0.00 43.70 2.93
7048 14148 2.189521 GTGGTAGCCGGGATGTGG 59.810 66.667 2.18 0.00 0.00 4.17
7049 14149 1.449601 GTGTGGTAGCCGGGATGTG 60.450 63.158 2.18 0.00 0.00 3.21
7050 14150 2.666098 GGTGTGGTAGCCGGGATGT 61.666 63.158 2.18 0.00 0.00 3.06
7051 14151 2.189521 GGTGTGGTAGCCGGGATG 59.810 66.667 2.18 0.00 0.00 3.51
7052 14152 3.467226 CGGTGTGGTAGCCGGGAT 61.467 66.667 2.18 0.00 43.85 3.85
7058 14158 4.323477 TGTGGGCGGTGTGGTAGC 62.323 66.667 0.00 0.00 0.00 3.58
7059 14159 2.358247 GTGTGGGCGGTGTGGTAG 60.358 66.667 0.00 0.00 0.00 3.18
7060 14160 4.302509 CGTGTGGGCGGTGTGGTA 62.303 66.667 0.00 0.00 0.00 3.25
7071 14171 3.067480 GATTGCCATGGCCGTGTGG 62.067 63.158 33.44 19.04 41.09 4.17
7072 14172 2.491152 GATTGCCATGGCCGTGTG 59.509 61.111 33.44 15.40 41.09 3.82
7073 14173 3.133464 CGATTGCCATGGCCGTGT 61.133 61.111 33.44 16.49 41.09 4.49
7074 14174 2.823593 TCGATTGCCATGGCCGTG 60.824 61.111 33.44 18.73 41.09 4.94
7075 14175 2.514592 CTCGATTGCCATGGCCGT 60.515 61.111 33.44 21.79 41.09 5.68
7076 14176 3.957535 GCTCGATTGCCATGGCCG 61.958 66.667 33.44 27.72 41.09 6.13
7077 14177 2.829914 TGCTCGATTGCCATGGCC 60.830 61.111 33.44 17.44 41.09 5.36
7078 14178 2.719979 CTGCTCGATTGCCATGGC 59.280 61.111 30.54 30.54 42.35 4.40
7079 14179 2.116533 TGCTGCTCGATTGCCATGG 61.117 57.895 7.63 7.63 0.00 3.66
7080 14180 1.063649 GTGCTGCTCGATTGCCATG 59.936 57.895 0.00 0.00 0.00 3.66
7081 14181 2.117156 GGTGCTGCTCGATTGCCAT 61.117 57.895 0.00 0.00 0.00 4.40
7082 14182 2.747460 GGTGCTGCTCGATTGCCA 60.747 61.111 0.00 0.00 0.00 4.92
7083 14183 2.262471 CTTGGTGCTGCTCGATTGCC 62.262 60.000 0.00 0.00 0.00 4.52
7084 14184 1.136147 CTTGGTGCTGCTCGATTGC 59.864 57.895 0.00 0.00 0.00 3.56
7085 14185 1.136147 GCTTGGTGCTGCTCGATTG 59.864 57.895 0.00 0.00 38.95 2.67
7086 14186 3.583383 GCTTGGTGCTGCTCGATT 58.417 55.556 0.00 0.00 38.95 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.