Multiple sequence alignment - TraesCS1D01G296900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G296900 chr1D 100.000 2988 0 0 1 2988 394951368 394948381 0.000000e+00 5518.0
1 TraesCS1D01G296900 chr1D 75.647 1392 273 46 998 2342 395410623 395409251 1.690000e-177 632.0
2 TraesCS1D01G296900 chr1D 77.083 1152 200 43 998 2102 395055332 395054198 1.020000e-169 606.0
3 TraesCS1D01G296900 chr1D 74.660 1397 282 48 998 2342 395078630 395077254 1.350000e-153 553.0
4 TraesCS1D01G296900 chr1D 73.951 1359 243 71 1127 2431 395452301 395451000 2.360000e-121 446.0
5 TraesCS1D01G296900 chr1D 100.000 136 0 0 3197 3332 394948172 394948037 5.520000e-63 252.0
6 TraesCS1D01G296900 chr1D 91.525 177 15 0 998 1174 395382444 395382268 9.230000e-61 244.0
7 TraesCS1D01G296900 chr1A 93.287 1013 54 2 742 1754 489289264 489288266 0.000000e+00 1482.0
8 TraesCS1D01G296900 chr1A 89.524 735 50 9 1745 2475 489287834 489287123 0.000000e+00 905.0
9 TraesCS1D01G296900 chr1A 77.836 1146 196 40 998 2102 489325619 489324491 0.000000e+00 656.0
10 TraesCS1D01G296900 chr1A 76.037 1398 258 52 997 2342 489393764 489392392 0.000000e+00 654.0
11 TraesCS1D01G296900 chr1A 89.484 504 52 1 230 733 489289804 489289302 1.300000e-178 636.0
12 TraesCS1D01G296900 chr1A 77.033 1119 203 32 1018 2099 489361174 489360073 7.960000e-166 593.0
13 TraesCS1D01G296900 chr1A 78.561 681 112 23 998 1661 489383672 489383009 5.140000e-113 418.0
14 TraesCS1D01G296900 chr1A 92.511 227 15 2 1 227 489290140 489289916 1.150000e-84 324.0
15 TraesCS1D01G296900 chr1A 73.520 608 122 27 1756 2342 489382788 489382199 9.430000e-46 195.0
16 TraesCS1D01G296900 chr1B 92.000 975 61 6 767 1731 526262032 526261065 0.000000e+00 1352.0
17 TraesCS1D01G296900 chr1B 87.940 738 46 9 1 733 526265450 526264751 0.000000e+00 830.0
18 TraesCS1D01G296900 chr1B 75.364 1372 270 49 1018 2342 526291400 526290050 1.710000e-167 599.0
19 TraesCS1D01G296900 chr1B 83.969 655 65 21 1925 2577 526261055 526260439 2.860000e-165 592.0
20 TraesCS1D01G296900 chr1B 74.933 1496 246 75 998 2431 526272318 526270890 1.740000e-157 566.0
21 TraesCS1D01G296900 chr3D 74.821 1398 279 47 998 2342 57035988 57037365 6.240000e-157 564.0
22 TraesCS1D01G296900 chr3D 75.144 696 129 30 1680 2342 57021779 57022463 1.510000e-73 287.0
23 TraesCS1D01G296900 chr3D 77.636 313 32 19 2704 2986 561009407 561009711 4.450000e-34 156.0
24 TraesCS1D01G296900 chr6A 84.424 443 61 6 3 438 12617639 12618080 2.380000e-116 429.0
25 TraesCS1D01G296900 chr6A 100.000 29 0 0 1289 1317 33967424 33967452 2.000000e-03 54.7
26 TraesCS1D01G296900 chr7B 81.425 463 59 6 3 438 137803027 137802565 1.470000e-93 353.0
27 TraesCS1D01G296900 chr4B 80.932 472 63 10 3 448 37873251 37873721 6.840000e-92 348.0
28 TraesCS1D01G296900 chr6D 81.195 452 55 14 25 447 11346133 11346583 1.480000e-88 337.0
29 TraesCS1D01G296900 chr6D 100.000 29 0 0 1289 1317 28683277 28683249 2.000000e-03 54.7
30 TraesCS1D01G296900 chr2D 84.444 180 27 1 1 180 536172119 536171941 3.420000e-40 176.0
31 TraesCS1D01G296900 chr2D 100.000 29 0 0 1289 1317 586571658 586571686 2.000000e-03 54.7
32 TraesCS1D01G296900 chr2D 100.000 29 0 0 1289 1317 586769319 586769347 2.000000e-03 54.7
33 TraesCS1D01G296900 chr6B 87.387 111 14 0 3 113 18087606 18087716 9.700000e-26 128.0
34 TraesCS1D01G296900 chr6B 100.000 29 0 0 1289 1317 62001587 62001615 2.000000e-03 54.7
35 TraesCS1D01G296900 chr5B 94.286 35 2 0 127 161 680547065 680547099 2.000000e-03 54.7
36 TraesCS1D01G296900 chr2B 100.000 29 0 0 1289 1317 708183727 708183755 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G296900 chr1D 394948037 394951368 3331 True 2885.000000 5518 100.000000 1 3332 2 chr1D.!!$R6 3331
1 TraesCS1D01G296900 chr1D 395409251 395410623 1372 True 632.000000 632 75.647000 998 2342 1 chr1D.!!$R4 1344
2 TraesCS1D01G296900 chr1D 395054198 395055332 1134 True 606.000000 606 77.083000 998 2102 1 chr1D.!!$R1 1104
3 TraesCS1D01G296900 chr1D 395077254 395078630 1376 True 553.000000 553 74.660000 998 2342 1 chr1D.!!$R2 1344
4 TraesCS1D01G296900 chr1D 395451000 395452301 1301 True 446.000000 446 73.951000 1127 2431 1 chr1D.!!$R5 1304
5 TraesCS1D01G296900 chr1A 489287123 489290140 3017 True 836.750000 1482 91.201500 1 2475 4 chr1A.!!$R4 2474
6 TraesCS1D01G296900 chr1A 489324491 489325619 1128 True 656.000000 656 77.836000 998 2102 1 chr1A.!!$R1 1104
7 TraesCS1D01G296900 chr1A 489392392 489393764 1372 True 654.000000 654 76.037000 997 2342 1 chr1A.!!$R3 1345
8 TraesCS1D01G296900 chr1A 489360073 489361174 1101 True 593.000000 593 77.033000 1018 2099 1 chr1A.!!$R2 1081
9 TraesCS1D01G296900 chr1A 489382199 489383672 1473 True 306.500000 418 76.040500 998 2342 2 chr1A.!!$R5 1344
10 TraesCS1D01G296900 chr1B 526260439 526265450 5011 True 924.666667 1352 87.969667 1 2577 3 chr1B.!!$R3 2576
11 TraesCS1D01G296900 chr1B 526290050 526291400 1350 True 599.000000 599 75.364000 1018 2342 1 chr1B.!!$R2 1324
12 TraesCS1D01G296900 chr1B 526270890 526272318 1428 True 566.000000 566 74.933000 998 2431 1 chr1B.!!$R1 1433
13 TraesCS1D01G296900 chr3D 57035988 57037365 1377 False 564.000000 564 74.821000 998 2342 1 chr3D.!!$F2 1344
14 TraesCS1D01G296900 chr3D 57021779 57022463 684 False 287.000000 287 75.144000 1680 2342 1 chr3D.!!$F1 662

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
578 689 0.106419 TTCCCCGAGTGTTTGGCTTT 60.106 50.0 0.0 0.0 0.00 3.51 F
1480 4335 0.109532 TGACTGCCATTTCGGTCCAA 59.890 50.0 0.0 0.0 40.69 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1545 4400 0.251653 AGCTCCAGTTACCCGTCTCA 60.252 55.0 0.0 0.0 0.0 3.27 R
2639 6096 0.169009 CGTGCGAGATCAGACAGACA 59.831 55.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.058160 GGTCTGCCACTGCGCAAT 61.058 61.111 13.05 0.00 41.78 3.56
37 38 4.226761 GCGCAATACTAAAAGTTGCAACT 58.773 39.130 26.36 26.36 46.35 3.16
39 40 4.616802 CGCAATACTAAAAGTTGCAACTGG 59.383 41.667 31.73 22.13 46.35 4.00
60 61 5.834169 TGGCGATCGATAATGTTACAACTA 58.166 37.500 21.57 0.00 0.00 2.24
183 184 2.144833 TACGAAGCTTCAACCGGCGA 62.145 55.000 25.47 0.00 0.00 5.54
192 193 2.281276 AACCGGCGACAGGGAAAC 60.281 61.111 9.30 0.00 0.00 2.78
256 366 4.038763 TGAAAAGCTTCAACTAGAGACCGA 59.961 41.667 0.00 0.00 38.65 4.69
270 381 0.164002 GACCGACGAGAAAAAGCTGC 59.836 55.000 0.00 0.00 0.00 5.25
345 456 2.615227 GATGCTGGAACCGATGCCCT 62.615 60.000 0.00 0.00 0.00 5.19
360 471 2.420568 CCCTCGCCATTGCTGCATT 61.421 57.895 1.84 0.00 34.43 3.56
396 507 3.276846 GACGCCGGTGTTGCAACT 61.277 61.111 28.61 8.05 0.00 3.16
451 562 0.248498 CGACGACACGATGGCATAGT 60.248 55.000 7.47 7.47 35.09 2.12
560 671 3.857052 TCCACGTGCGATTTCTATTCTT 58.143 40.909 10.91 0.00 0.00 2.52
574 685 2.200373 ATTCTTCCCCGAGTGTTTGG 57.800 50.000 0.00 0.00 0.00 3.28
578 689 0.106419 TTCCCCGAGTGTTTGGCTTT 60.106 50.000 0.00 0.00 0.00 3.51
597 708 4.157472 GCTTTTCTGGGAAGAGATTTGAGG 59.843 45.833 2.65 0.00 0.00 3.86
602 713 6.891306 TCTGGGAAGAGATTTGAGGAATAA 57.109 37.500 0.00 0.00 0.00 1.40
624 735 1.281899 GGACGCATCAGACAGCTAAC 58.718 55.000 0.00 0.00 0.00 2.34
679 790 0.676782 CGAAATTTCGGCCCACCTCT 60.677 55.000 28.73 0.00 46.30 3.69
708 819 5.244626 GCCTATCACTGGCCAATTATTTCAT 59.755 40.000 7.01 0.00 44.32 2.57
711 822 9.028284 CCTATCACTGGCCAATTATTTCATAAT 57.972 33.333 7.01 0.00 37.05 1.28
733 844 6.741992 ATTAAAGATCGACATGTCAAAGCA 57.258 33.333 24.93 4.00 0.00 3.91
734 845 4.410492 AAAGATCGACATGTCAAAGCAC 57.590 40.909 24.93 9.80 0.00 4.40
735 846 3.044235 AGATCGACATGTCAAAGCACA 57.956 42.857 24.93 0.56 0.00 4.57
740 851 3.024423 CATGTCAAAGCACATGCCG 57.976 52.632 0.00 0.00 45.43 5.69
741 852 0.522626 CATGTCAAAGCACATGCCGA 59.477 50.000 0.00 0.00 45.43 5.54
742 853 1.068402 CATGTCAAAGCACATGCCGAA 60.068 47.619 0.00 0.00 45.43 4.30
825 3621 8.723311 CCCACTTCAGTAATTTTGTAACGATTA 58.277 33.333 0.00 0.00 0.00 1.75
831 3627 8.649841 TCAGTAATTTTGTAACGATTAAGACGG 58.350 33.333 9.09 0.00 34.93 4.79
867 3663 1.168714 AAACAAAGAGGCGCCAGATC 58.831 50.000 31.54 18.22 0.00 2.75
1480 4335 0.109532 TGACTGCCATTTCGGTCCAA 59.890 50.000 0.00 0.00 40.69 3.53
1520 4375 3.254024 TTGACGAGGAAGCCAGGGC 62.254 63.158 0.97 0.97 42.33 5.19
1545 4400 2.684843 GGCGTCCGTGTACTCGTCT 61.685 63.158 15.43 0.00 0.00 4.18
1592 4447 2.622942 TCACTCTGGATGTTGGTTTTGC 59.377 45.455 0.00 0.00 0.00 3.68
1593 4448 1.963515 ACTCTGGATGTTGGTTTTGCC 59.036 47.619 0.00 0.00 37.90 4.52
1623 4478 0.394762 TCAGCTTCACCATGATGCCC 60.395 55.000 11.76 0.00 45.37 5.36
1731 4706 2.037641 CCTATCGGACATTCATCTGCCA 59.962 50.000 0.00 0.00 0.00 4.92
1807 5223 2.202623 GGCTCGCAGACCTGTACG 60.203 66.667 0.00 0.00 0.00 3.67
1822 5238 3.522553 CTGTACGATTTCAACCTCTCCC 58.477 50.000 0.00 0.00 0.00 4.30
1869 5285 4.012895 GTTGCGTCGTGGGCACAG 62.013 66.667 0.00 0.00 40.71 3.66
1893 5309 0.802607 GACGCATCAACCTCGAGACC 60.803 60.000 15.71 0.00 0.00 3.85
1951 5370 2.688666 TTGGCTCCATCGAGGGCT 60.689 61.111 12.24 0.00 36.55 5.19
2020 5445 2.479656 CTCAAGTCACTGAGCTTGAAGC 59.520 50.000 9.59 9.59 46.82 3.86
2148 5586 6.271488 ACATGTAGTTGTGATTTGGGAATG 57.729 37.500 0.00 0.00 0.00 2.67
2299 5749 0.953727 TGTTGTGGCTGAAGCATCAC 59.046 50.000 4.43 4.85 44.36 3.06
2312 5765 1.281287 AGCATCACATGAAGCTGGACT 59.719 47.619 10.62 0.00 45.92 3.85
2325 5778 0.107508 CTGGACTTGGCGATGGTGAT 60.108 55.000 0.00 0.00 0.00 3.06
2346 5799 1.002033 GCATAAATCTCAAGCAGGCCG 60.002 52.381 0.00 0.00 0.00 6.13
2403 5860 2.489722 TGGCTTTTGTTTTGGGTTTTGC 59.510 40.909 0.00 0.00 0.00 3.68
2416 5873 2.336667 GGTTTTGCGTTTGATGGATGG 58.663 47.619 0.00 0.00 0.00 3.51
2422 5879 2.023788 GCGTTTGATGGATGGTGGGAT 61.024 52.381 0.00 0.00 0.00 3.85
2425 5882 2.887152 GTTTGATGGATGGTGGGATAGC 59.113 50.000 0.00 0.00 0.00 2.97
2450 5907 7.386848 GCTGTGTTATGTCTTGTTAAGAACCTA 59.613 37.037 0.00 0.00 39.67 3.08
2490 5947 7.678947 AACATGCTATCAATATCCTAGTTGC 57.321 36.000 0.00 0.00 0.00 4.17
2491 5948 7.013823 ACATGCTATCAATATCCTAGTTGCT 57.986 36.000 0.00 0.00 0.00 3.91
2492 5949 7.102346 ACATGCTATCAATATCCTAGTTGCTC 58.898 38.462 0.00 0.00 0.00 4.26
2493 5950 6.670695 TGCTATCAATATCCTAGTTGCTCA 57.329 37.500 0.00 0.00 0.00 4.26
2494 5951 7.066307 TGCTATCAATATCCTAGTTGCTCAA 57.934 36.000 0.00 0.00 0.00 3.02
2495 5952 6.931281 TGCTATCAATATCCTAGTTGCTCAAC 59.069 38.462 4.67 4.67 41.45 3.18
2496 5953 6.931281 GCTATCAATATCCTAGTTGCTCAACA 59.069 38.462 14.32 1.30 43.47 3.33
2497 5954 7.095439 GCTATCAATATCCTAGTTGCTCAACAC 60.095 40.741 14.32 0.00 43.47 3.32
2498 5955 5.428253 TCAATATCCTAGTTGCTCAACACC 58.572 41.667 14.32 0.00 43.47 4.16
2499 5956 5.189736 TCAATATCCTAGTTGCTCAACACCT 59.810 40.000 14.32 0.00 43.47 4.00
2500 5957 5.700402 ATATCCTAGTTGCTCAACACCTT 57.300 39.130 14.32 0.00 43.47 3.50
2501 5958 3.126001 TCCTAGTTGCTCAACACCTTG 57.874 47.619 14.32 0.08 43.47 3.61
2502 5959 2.438021 TCCTAGTTGCTCAACACCTTGT 59.562 45.455 14.32 0.00 43.47 3.16
2503 5960 3.118038 TCCTAGTTGCTCAACACCTTGTT 60.118 43.478 14.32 0.00 42.08 2.83
2504 5961 3.632145 CCTAGTTGCTCAACACCTTGTTT 59.368 43.478 14.32 0.00 38.77 2.83
2505 5962 3.782889 AGTTGCTCAACACCTTGTTTC 57.217 42.857 14.32 0.00 38.77 2.78
2506 5963 3.088532 AGTTGCTCAACACCTTGTTTCA 58.911 40.909 14.32 0.00 38.77 2.69
2507 5964 3.701040 AGTTGCTCAACACCTTGTTTCAT 59.299 39.130 14.32 0.00 38.77 2.57
2508 5965 4.160252 AGTTGCTCAACACCTTGTTTCATT 59.840 37.500 14.32 0.00 38.77 2.57
2518 5975 9.097257 CAACACCTTGTTTCATTTCATTAAAGT 57.903 29.630 0.00 0.00 38.77 2.66
2522 5979 9.927668 ACCTTGTTTCATTTCATTAAAGTATGG 57.072 29.630 0.00 0.00 0.00 2.74
2532 5989 5.826643 TCATTAAAGTATGGGAAGGTTGCT 58.173 37.500 0.00 0.00 0.00 3.91
2535 5992 6.584185 TTAAAGTATGGGAAGGTTGCTTTC 57.416 37.500 0.00 0.00 0.00 2.62
2548 6005 6.002062 AGGTTGCTTTCTGTCTAAAAATCG 57.998 37.500 0.00 0.00 0.00 3.34
2551 6008 5.264060 TGCTTTCTGTCTAAAAATCGACG 57.736 39.130 0.00 0.00 32.93 5.12
2552 6009 4.082447 GCTTTCTGTCTAAAAATCGACGC 58.918 43.478 0.00 0.00 32.93 5.19
2562 6019 3.430333 AAAATCGACGCCAAGTTTTGT 57.570 38.095 0.00 0.00 0.00 2.83
2565 6022 1.063327 CGACGCCAAGTTTTGTGCA 59.937 52.632 0.00 0.00 0.00 4.57
2569 6026 2.724174 GACGCCAAGTTTTGTGCATAAC 59.276 45.455 0.00 0.00 0.00 1.89
2586 6043 9.274206 TGTGCATAACAACTGTATAAACTTACA 57.726 29.630 0.00 0.00 35.24 2.41
2587 6044 9.537848 GTGCATAACAACTGTATAAACTTACAC 57.462 33.333 0.00 0.00 0.00 2.90
2588 6045 8.723311 TGCATAACAACTGTATAAACTTACACC 58.277 33.333 0.00 0.00 0.00 4.16
2589 6046 8.943002 GCATAACAACTGTATAAACTTACACCT 58.057 33.333 0.00 0.00 0.00 4.00
2594 6051 9.623000 ACAACTGTATAAACTTACACCTTTTCT 57.377 29.630 0.00 0.00 0.00 2.52
2605 6062 9.797556 AACTTACACCTTTTCTATTTTTCACAC 57.202 29.630 0.00 0.00 0.00 3.82
2606 6063 8.126700 ACTTACACCTTTTCTATTTTTCACACG 58.873 33.333 0.00 0.00 0.00 4.49
2607 6064 6.445357 ACACCTTTTCTATTTTTCACACGT 57.555 33.333 0.00 0.00 0.00 4.49
2608 6065 6.492254 ACACCTTTTCTATTTTTCACACGTC 58.508 36.000 0.00 0.00 0.00 4.34
2609 6066 6.317893 ACACCTTTTCTATTTTTCACACGTCT 59.682 34.615 0.00 0.00 0.00 4.18
2610 6067 6.632834 CACCTTTTCTATTTTTCACACGTCTG 59.367 38.462 0.00 0.00 0.00 3.51
2611 6068 6.317893 ACCTTTTCTATTTTTCACACGTCTGT 59.682 34.615 0.00 0.00 0.00 3.41
2612 6069 7.148137 ACCTTTTCTATTTTTCACACGTCTGTT 60.148 33.333 0.00 0.00 0.00 3.16
2613 6070 7.700656 CCTTTTCTATTTTTCACACGTCTGTTT 59.299 33.333 0.00 0.00 0.00 2.83
2614 6071 8.973835 TTTTCTATTTTTCACACGTCTGTTTT 57.026 26.923 0.00 0.00 0.00 2.43
2615 6072 8.973835 TTTCTATTTTTCACACGTCTGTTTTT 57.026 26.923 0.00 0.00 0.00 1.94
2640 6097 9.651913 TTTATTTGGCTTTAGGCTATTTTTCTG 57.348 29.630 0.00 0.00 41.69 3.02
2641 6098 6.664428 TTTGGCTTTAGGCTATTTTTCTGT 57.336 33.333 0.00 0.00 41.69 3.41
2642 6099 5.897377 TGGCTTTAGGCTATTTTTCTGTC 57.103 39.130 0.00 0.00 41.69 3.51
2643 6100 5.570320 TGGCTTTAGGCTATTTTTCTGTCT 58.430 37.500 0.00 0.00 41.69 3.41
2644 6101 5.415701 TGGCTTTAGGCTATTTTTCTGTCTG 59.584 40.000 0.00 0.00 41.69 3.51
2645 6102 5.416013 GGCTTTAGGCTATTTTTCTGTCTGT 59.584 40.000 0.00 0.00 41.46 3.41
2646 6103 6.403746 GGCTTTAGGCTATTTTTCTGTCTGTC 60.404 42.308 0.00 0.00 41.46 3.51
2647 6104 6.372937 GCTTTAGGCTATTTTTCTGTCTGTCT 59.627 38.462 0.00 0.00 38.06 3.41
2648 6105 7.625185 GCTTTAGGCTATTTTTCTGTCTGTCTG 60.625 40.741 0.00 0.00 38.06 3.51
2649 6106 5.489792 AGGCTATTTTTCTGTCTGTCTGA 57.510 39.130 0.00 0.00 0.00 3.27
2650 6107 6.059787 AGGCTATTTTTCTGTCTGTCTGAT 57.940 37.500 0.00 0.00 0.00 2.90
2651 6108 6.112058 AGGCTATTTTTCTGTCTGTCTGATC 58.888 40.000 0.00 0.00 0.00 2.92
2652 6109 6.070309 AGGCTATTTTTCTGTCTGTCTGATCT 60.070 38.462 0.00 0.00 0.00 2.75
2653 6110 6.257630 GGCTATTTTTCTGTCTGTCTGATCTC 59.742 42.308 0.00 0.00 0.00 2.75
2654 6111 6.019961 GCTATTTTTCTGTCTGTCTGATCTCG 60.020 42.308 0.00 0.00 0.00 4.04
2655 6112 2.929531 TTCTGTCTGTCTGATCTCGC 57.070 50.000 0.00 0.00 0.00 5.03
2656 6113 1.826385 TCTGTCTGTCTGATCTCGCA 58.174 50.000 0.00 0.00 0.00 5.10
2657 6114 1.470494 TCTGTCTGTCTGATCTCGCAC 59.530 52.381 0.00 0.00 0.00 5.34
2658 6115 0.169009 TGTCTGTCTGATCTCGCACG 59.831 55.000 0.00 0.00 0.00 5.34
2659 6116 0.448197 GTCTGTCTGATCTCGCACGA 59.552 55.000 0.00 0.00 0.00 4.35
2660 6117 1.135660 GTCTGTCTGATCTCGCACGAA 60.136 52.381 0.00 0.00 0.00 3.85
2661 6118 1.745653 TCTGTCTGATCTCGCACGAAT 59.254 47.619 0.00 0.00 0.00 3.34
2662 6119 2.115595 CTGTCTGATCTCGCACGAATC 58.884 52.381 0.00 1.92 0.00 2.52
2663 6120 1.745653 TGTCTGATCTCGCACGAATCT 59.254 47.619 12.81 0.00 0.00 2.40
2664 6121 2.223363 TGTCTGATCTCGCACGAATCTC 60.223 50.000 12.81 4.10 0.00 2.75
2665 6122 2.032799 GTCTGATCTCGCACGAATCTCT 59.967 50.000 12.81 0.00 0.00 3.10
2666 6123 2.032675 TCTGATCTCGCACGAATCTCTG 59.967 50.000 12.81 6.70 0.00 3.35
2667 6124 1.127701 GATCTCGCACGAATCTCTGC 58.872 55.000 0.00 0.00 0.00 4.26
2671 6128 3.918220 GCACGAATCTCTGCGGCG 61.918 66.667 0.51 0.51 0.00 6.46
2672 6129 3.918220 CACGAATCTCTGCGGCGC 61.918 66.667 27.44 27.44 0.00 6.53
2675 6132 3.326210 GAATCTCTGCGGCGCGAG 61.326 66.667 32.46 32.46 33.22 5.03
2676 6133 4.135153 AATCTCTGCGGCGCGAGT 62.135 61.111 34.45 25.15 33.50 4.18
2677 6134 4.862092 ATCTCTGCGGCGCGAGTG 62.862 66.667 34.45 27.40 33.50 3.51
2694 6151 4.736896 GTCTTCGGCGGGCGAACT 62.737 66.667 31.59 0.00 0.00 3.01
2695 6152 4.735132 TCTTCGGCGGGCGAACTG 62.735 66.667 31.59 23.46 0.00 3.16
2700 6157 4.162690 GGCGGGCGAACTGGATCT 62.163 66.667 0.00 0.00 0.00 2.75
2701 6158 2.586357 GCGGGCGAACTGGATCTC 60.586 66.667 0.00 0.00 0.00 2.75
2702 6159 2.278857 CGGGCGAACTGGATCTCG 60.279 66.667 0.00 0.00 38.11 4.04
2703 6160 2.107141 GGGCGAACTGGATCTCGG 59.893 66.667 4.51 0.00 35.60 4.63
2704 6161 2.107141 GGCGAACTGGATCTCGGG 59.893 66.667 4.51 0.00 35.60 5.14
2705 6162 2.107141 GCGAACTGGATCTCGGGG 59.893 66.667 4.51 0.00 35.60 5.73
2706 6163 2.107141 CGAACTGGATCTCGGGGC 59.893 66.667 0.00 0.00 0.00 5.80
2707 6164 2.107141 GAACTGGATCTCGGGGCG 59.893 66.667 0.00 0.00 0.00 6.13
2708 6165 3.447025 GAACTGGATCTCGGGGCGG 62.447 68.421 0.00 0.00 0.00 6.13
2713 6170 4.530857 GATCTCGGGGCGGGTGTG 62.531 72.222 0.00 0.00 0.00 3.82
2723 6180 4.424711 CGGGTGTGGGGGATGGTG 62.425 72.222 0.00 0.00 0.00 4.17
2724 6181 4.060667 GGGTGTGGGGGATGGTGG 62.061 72.222 0.00 0.00 0.00 4.61
2725 6182 3.264845 GGTGTGGGGGATGGTGGT 61.265 66.667 0.00 0.00 0.00 4.16
2726 6183 2.851045 GTGTGGGGGATGGTGGTT 59.149 61.111 0.00 0.00 0.00 3.67
2727 6184 1.155155 GTGTGGGGGATGGTGGTTT 59.845 57.895 0.00 0.00 0.00 3.27
2728 6185 0.898326 GTGTGGGGGATGGTGGTTTC 60.898 60.000 0.00 0.00 0.00 2.78
2729 6186 1.364317 TGTGGGGGATGGTGGTTTCA 61.364 55.000 0.00 0.00 0.00 2.69
2730 6187 0.611896 GTGGGGGATGGTGGTTTCAG 60.612 60.000 0.00 0.00 0.00 3.02
2731 6188 0.774096 TGGGGGATGGTGGTTTCAGA 60.774 55.000 0.00 0.00 0.00 3.27
2732 6189 0.631212 GGGGGATGGTGGTTTCAGAT 59.369 55.000 0.00 0.00 0.00 2.90
2733 6190 1.850345 GGGGGATGGTGGTTTCAGATA 59.150 52.381 0.00 0.00 0.00 1.98
2734 6191 2.422945 GGGGGATGGTGGTTTCAGATAC 60.423 54.545 0.00 0.00 0.00 2.24
2735 6192 2.241176 GGGGATGGTGGTTTCAGATACA 59.759 50.000 0.00 0.00 0.00 2.29
2736 6193 3.117512 GGGGATGGTGGTTTCAGATACAT 60.118 47.826 0.00 0.00 0.00 2.29
2737 6194 4.536765 GGGATGGTGGTTTCAGATACATT 58.463 43.478 0.00 0.00 0.00 2.71
2738 6195 4.580580 GGGATGGTGGTTTCAGATACATTC 59.419 45.833 0.00 0.00 0.00 2.67
2739 6196 4.580580 GGATGGTGGTTTCAGATACATTCC 59.419 45.833 0.00 0.00 0.00 3.01
2740 6197 3.605634 TGGTGGTTTCAGATACATTCCG 58.394 45.455 0.00 0.00 0.00 4.30
2741 6198 2.354821 GGTGGTTTCAGATACATTCCGC 59.645 50.000 0.00 0.00 0.00 5.54
2742 6199 3.270877 GTGGTTTCAGATACATTCCGCT 58.729 45.455 0.00 0.00 0.00 5.52
2743 6200 3.309954 GTGGTTTCAGATACATTCCGCTC 59.690 47.826 0.00 0.00 0.00 5.03
2744 6201 3.055458 TGGTTTCAGATACATTCCGCTCA 60.055 43.478 0.00 0.00 0.00 4.26
2745 6202 3.938963 GGTTTCAGATACATTCCGCTCAA 59.061 43.478 0.00 0.00 0.00 3.02
2746 6203 4.576463 GGTTTCAGATACATTCCGCTCAAT 59.424 41.667 0.00 0.00 0.00 2.57
2747 6204 5.504665 GGTTTCAGATACATTCCGCTCAATG 60.505 44.000 3.56 3.56 39.35 2.82
2748 6205 4.406648 TCAGATACATTCCGCTCAATGT 57.593 40.909 13.02 13.02 46.54 2.71
2749 6206 4.769688 TCAGATACATTCCGCTCAATGTT 58.230 39.130 13.53 4.54 43.17 2.71
2750 6207 4.811024 TCAGATACATTCCGCTCAATGTTC 59.189 41.667 13.53 11.08 43.17 3.18
2751 6208 4.571984 CAGATACATTCCGCTCAATGTTCA 59.428 41.667 13.53 0.53 43.17 3.18
2752 6209 4.813161 AGATACATTCCGCTCAATGTTCAG 59.187 41.667 13.53 0.00 43.17 3.02
2753 6210 2.783135 ACATTCCGCTCAATGTTCAGT 58.217 42.857 4.68 0.00 43.17 3.41
2754 6211 3.937814 ACATTCCGCTCAATGTTCAGTA 58.062 40.909 4.68 0.00 43.17 2.74
2755 6212 4.323417 ACATTCCGCTCAATGTTCAGTAA 58.677 39.130 4.68 0.00 43.17 2.24
2756 6213 4.759693 ACATTCCGCTCAATGTTCAGTAAA 59.240 37.500 4.68 0.00 43.17 2.01
2757 6214 5.106555 ACATTCCGCTCAATGTTCAGTAAAG 60.107 40.000 4.68 0.00 43.17 1.85
2758 6215 4.002906 TCCGCTCAATGTTCAGTAAAGT 57.997 40.909 0.00 0.00 0.00 2.66
2759 6216 3.745975 TCCGCTCAATGTTCAGTAAAGTG 59.254 43.478 0.00 0.00 0.00 3.16
2760 6217 3.498397 CCGCTCAATGTTCAGTAAAGTGT 59.502 43.478 0.00 0.00 0.00 3.55
2761 6218 4.377431 CCGCTCAATGTTCAGTAAAGTGTC 60.377 45.833 0.00 0.00 0.00 3.67
2762 6219 4.377431 CGCTCAATGTTCAGTAAAGTGTCC 60.377 45.833 0.00 0.00 0.00 4.02
2763 6220 4.757149 GCTCAATGTTCAGTAAAGTGTCCT 59.243 41.667 0.00 0.00 0.00 3.85
2764 6221 5.334414 GCTCAATGTTCAGTAAAGTGTCCTG 60.334 44.000 0.00 0.00 0.00 3.86
2765 6222 5.924356 TCAATGTTCAGTAAAGTGTCCTGA 58.076 37.500 0.00 0.00 33.59 3.86
2766 6223 6.353323 TCAATGTTCAGTAAAGTGTCCTGAA 58.647 36.000 0.00 0.00 41.55 3.02
2767 6224 6.998074 TCAATGTTCAGTAAAGTGTCCTGAAT 59.002 34.615 4.80 0.00 44.43 2.57
2768 6225 7.502226 TCAATGTTCAGTAAAGTGTCCTGAATT 59.498 33.333 4.80 0.00 44.43 2.17
2769 6226 7.823745 ATGTTCAGTAAAGTGTCCTGAATTT 57.176 32.000 4.80 0.00 44.43 1.82
2770 6227 7.639113 TGTTCAGTAAAGTGTCCTGAATTTT 57.361 32.000 4.80 0.00 44.43 1.82
2771 6228 8.062065 TGTTCAGTAAAGTGTCCTGAATTTTT 57.938 30.769 4.80 0.00 44.43 1.94
2790 6247 4.921470 TTTTGCGTTCAGTATCTGCTAC 57.079 40.909 0.00 0.00 0.00 3.58
2791 6248 3.868757 TTGCGTTCAGTATCTGCTACT 57.131 42.857 0.00 0.00 41.53 2.57
2792 6249 3.422417 TGCGTTCAGTATCTGCTACTC 57.578 47.619 0.00 0.00 38.68 2.59
2793 6250 3.017442 TGCGTTCAGTATCTGCTACTCT 58.983 45.455 0.00 0.00 38.68 3.24
2794 6251 3.065510 TGCGTTCAGTATCTGCTACTCTC 59.934 47.826 0.00 0.00 38.68 3.20
2795 6252 3.846744 GCGTTCAGTATCTGCTACTCTCG 60.847 52.174 0.00 0.00 38.68 4.04
2796 6253 3.556365 CGTTCAGTATCTGCTACTCTCGA 59.444 47.826 0.00 0.00 38.68 4.04
2797 6254 4.212425 CGTTCAGTATCTGCTACTCTCGAT 59.788 45.833 0.00 0.00 38.68 3.59
2798 6255 5.613795 CGTTCAGTATCTGCTACTCTCGATC 60.614 48.000 0.00 0.00 38.68 3.69
2799 6256 4.962155 TCAGTATCTGCTACTCTCGATCA 58.038 43.478 0.00 0.00 38.68 2.92
2800 6257 4.994217 TCAGTATCTGCTACTCTCGATCAG 59.006 45.833 0.00 0.00 38.68 2.90
2801 6258 4.994217 CAGTATCTGCTACTCTCGATCAGA 59.006 45.833 0.00 0.00 38.68 3.27
2802 6259 4.994852 AGTATCTGCTACTCTCGATCAGAC 59.005 45.833 0.00 0.00 35.73 3.51
2803 6260 2.566913 TCTGCTACTCTCGATCAGACC 58.433 52.381 0.00 0.00 0.00 3.85
2804 6261 2.092914 TCTGCTACTCTCGATCAGACCA 60.093 50.000 0.00 0.00 0.00 4.02
2805 6262 2.884012 CTGCTACTCTCGATCAGACCAT 59.116 50.000 0.00 0.00 0.00 3.55
2806 6263 2.620585 TGCTACTCTCGATCAGACCATG 59.379 50.000 0.00 0.00 0.00 3.66
2807 6264 2.606795 GCTACTCTCGATCAGACCATGC 60.607 54.545 0.00 0.00 0.00 4.06
2808 6265 0.383590 ACTCTCGATCAGACCATGCG 59.616 55.000 0.00 0.00 0.00 4.73
2809 6266 0.318529 CTCTCGATCAGACCATGCGG 60.319 60.000 0.00 0.00 38.77 5.69
2823 6280 4.997565 ACCATGCGGTTGATTTAATTCAG 58.002 39.130 0.75 0.00 46.31 3.02
2824 6281 4.462483 ACCATGCGGTTGATTTAATTCAGT 59.538 37.500 0.75 0.00 46.31 3.41
2825 6282 5.047377 ACCATGCGGTTGATTTAATTCAGTT 60.047 36.000 0.75 0.00 46.31 3.16
2826 6283 5.868801 CCATGCGGTTGATTTAATTCAGTTT 59.131 36.000 0.75 0.00 0.00 2.66
2827 6284 6.368516 CCATGCGGTTGATTTAATTCAGTTTT 59.631 34.615 0.75 0.00 0.00 2.43
2828 6285 6.761731 TGCGGTTGATTTAATTCAGTTTTG 57.238 33.333 0.75 0.00 0.00 2.44
2829 6286 5.694006 TGCGGTTGATTTAATTCAGTTTTGG 59.306 36.000 0.75 0.00 0.00 3.28
2830 6287 5.389411 GCGGTTGATTTAATTCAGTTTTGGC 60.389 40.000 0.75 0.00 0.00 4.52
2831 6288 5.120053 CGGTTGATTTAATTCAGTTTTGGCC 59.880 40.000 0.00 0.00 0.00 5.36
2832 6289 5.411361 GGTTGATTTAATTCAGTTTTGGCCC 59.589 40.000 0.00 0.00 0.00 5.80
2833 6290 6.230472 GTTGATTTAATTCAGTTTTGGCCCT 58.770 36.000 0.00 0.00 0.00 5.19
2834 6291 5.792741 TGATTTAATTCAGTTTTGGCCCTG 58.207 37.500 0.00 0.00 0.00 4.45
2835 6292 5.541868 TGATTTAATTCAGTTTTGGCCCTGA 59.458 36.000 0.00 2.15 35.97 3.86
2841 6298 4.046286 TCAGTTTTGGCCCTGAATATGT 57.954 40.909 6.94 0.00 34.88 2.29
2842 6299 3.763360 TCAGTTTTGGCCCTGAATATGTG 59.237 43.478 6.94 0.00 34.88 3.21
2843 6300 3.511146 CAGTTTTGGCCCTGAATATGTGT 59.489 43.478 0.00 0.00 0.00 3.72
2844 6301 3.511146 AGTTTTGGCCCTGAATATGTGTG 59.489 43.478 0.00 0.00 0.00 3.82
2845 6302 2.897271 TTGGCCCTGAATATGTGTGT 57.103 45.000 0.00 0.00 0.00 3.72
2846 6303 2.897271 TGGCCCTGAATATGTGTGTT 57.103 45.000 0.00 0.00 0.00 3.32
2847 6304 2.722094 TGGCCCTGAATATGTGTGTTC 58.278 47.619 0.00 0.00 0.00 3.18
2848 6305 2.040947 TGGCCCTGAATATGTGTGTTCA 59.959 45.455 0.00 0.00 34.75 3.18
2849 6306 2.684881 GGCCCTGAATATGTGTGTTCAG 59.315 50.000 7.87 7.87 46.90 3.02
2850 6307 3.347216 GCCCTGAATATGTGTGTTCAGT 58.653 45.455 12.47 0.00 46.31 3.41
2851 6308 3.758554 GCCCTGAATATGTGTGTTCAGTT 59.241 43.478 12.47 0.00 46.31 3.16
2852 6309 4.218417 GCCCTGAATATGTGTGTTCAGTTT 59.782 41.667 12.47 0.00 46.31 2.66
2853 6310 5.278957 GCCCTGAATATGTGTGTTCAGTTTT 60.279 40.000 12.47 0.00 46.31 2.43
2854 6311 6.381801 CCCTGAATATGTGTGTTCAGTTTTC 58.618 40.000 12.47 0.00 46.31 2.29
2855 6312 6.207417 CCCTGAATATGTGTGTTCAGTTTTCT 59.793 38.462 12.47 0.00 46.31 2.52
2856 6313 7.301054 CCTGAATATGTGTGTTCAGTTTTCTC 58.699 38.462 12.47 0.00 46.31 2.87
2857 6314 7.173907 CCTGAATATGTGTGTTCAGTTTTCTCT 59.826 37.037 12.47 0.00 46.31 3.10
2858 6315 9.208022 CTGAATATGTGTGTTCAGTTTTCTCTA 57.792 33.333 6.89 0.00 44.14 2.43
2859 6316 9.554395 TGAATATGTGTGTTCAGTTTTCTCTAA 57.446 29.630 0.00 0.00 31.52 2.10
2862 6319 9.950496 ATATGTGTGTTCAGTTTTCTCTAATCT 57.050 29.630 0.00 0.00 0.00 2.40
2863 6320 7.715265 TGTGTGTTCAGTTTTCTCTAATCTC 57.285 36.000 0.00 0.00 0.00 2.75
2864 6321 7.500992 TGTGTGTTCAGTTTTCTCTAATCTCT 58.499 34.615 0.00 0.00 0.00 3.10
2865 6322 8.638873 TGTGTGTTCAGTTTTCTCTAATCTCTA 58.361 33.333 0.00 0.00 0.00 2.43
2866 6323 9.134734 GTGTGTTCAGTTTTCTCTAATCTCTAG 57.865 37.037 0.00 0.00 0.00 2.43
2867 6324 7.815068 TGTGTTCAGTTTTCTCTAATCTCTAGC 59.185 37.037 0.00 0.00 0.00 3.42
2868 6325 8.032451 GTGTTCAGTTTTCTCTAATCTCTAGCT 58.968 37.037 0.00 0.00 0.00 3.32
2869 6326 8.589338 TGTTCAGTTTTCTCTAATCTCTAGCTT 58.411 33.333 0.00 0.00 0.00 3.74
2870 6327 9.430623 GTTCAGTTTTCTCTAATCTCTAGCTTT 57.569 33.333 0.00 0.00 0.00 3.51
2878 6335 8.824756 TCTCTAATCTCTAGCTTTTTAGGTCA 57.175 34.615 0.00 0.00 0.00 4.02
2879 6336 9.427821 TCTCTAATCTCTAGCTTTTTAGGTCAT 57.572 33.333 0.00 0.00 0.00 3.06
2880 6337 9.474920 CTCTAATCTCTAGCTTTTTAGGTCATG 57.525 37.037 0.00 0.00 0.00 3.07
2881 6338 6.934048 AATCTCTAGCTTTTTAGGTCATGC 57.066 37.500 0.00 0.00 0.00 4.06
2882 6339 5.420725 TCTCTAGCTTTTTAGGTCATGCA 57.579 39.130 0.00 0.00 0.00 3.96
2883 6340 5.804639 TCTCTAGCTTTTTAGGTCATGCAA 58.195 37.500 0.00 0.00 0.00 4.08
2884 6341 6.418101 TCTCTAGCTTTTTAGGTCATGCAAT 58.582 36.000 0.00 0.00 0.00 3.56
2885 6342 6.886459 TCTCTAGCTTTTTAGGTCATGCAATT 59.114 34.615 0.00 0.00 0.00 2.32
2886 6343 6.855836 TCTAGCTTTTTAGGTCATGCAATTG 58.144 36.000 0.00 0.00 0.00 2.32
2887 6344 5.726980 AGCTTTTTAGGTCATGCAATTGA 57.273 34.783 10.34 0.00 0.00 2.57
2888 6345 6.290294 AGCTTTTTAGGTCATGCAATTGAT 57.710 33.333 10.34 0.00 0.00 2.57
2889 6346 6.704310 AGCTTTTTAGGTCATGCAATTGATT 58.296 32.000 10.34 0.00 0.00 2.57
2890 6347 7.839907 AGCTTTTTAGGTCATGCAATTGATTA 58.160 30.769 10.34 0.00 0.00 1.75
2891 6348 8.313292 AGCTTTTTAGGTCATGCAATTGATTAA 58.687 29.630 10.34 0.00 0.00 1.40
2892 6349 9.101655 GCTTTTTAGGTCATGCAATTGATTAAT 57.898 29.630 10.34 0.00 0.00 1.40
2898 6355 8.537728 AGGTCATGCAATTGATTAATTAAGGA 57.462 30.769 10.34 0.00 34.81 3.36
2899 6356 8.980596 AGGTCATGCAATTGATTAATTAAGGAA 58.019 29.630 10.34 0.00 34.81 3.36
2900 6357 9.598517 GGTCATGCAATTGATTAATTAAGGAAA 57.401 29.630 10.34 0.00 34.81 3.13
2905 6362 9.995003 TGCAATTGATTAATTAAGGAAAACTGT 57.005 25.926 10.34 0.00 34.81 3.55
2916 6373 9.912634 AATTAAGGAAAACTGTCATTGTACATG 57.087 29.630 0.00 0.00 0.00 3.21
2917 6374 6.959639 AAGGAAAACTGTCATTGTACATGT 57.040 33.333 2.69 2.69 0.00 3.21
2918 6375 9.562408 TTAAGGAAAACTGTCATTGTACATGTA 57.438 29.630 0.08 0.08 0.00 2.29
2919 6376 8.635765 AAGGAAAACTGTCATTGTACATGTAT 57.364 30.769 9.18 0.00 0.00 2.29
2920 6377 8.044060 AGGAAAACTGTCATTGTACATGTATG 57.956 34.615 9.18 4.77 0.00 2.39
2921 6378 7.665559 AGGAAAACTGTCATTGTACATGTATGT 59.334 33.333 9.18 2.75 44.48 2.29
2922 6379 8.296713 GGAAAACTGTCATTGTACATGTATGTT 58.703 33.333 9.18 2.66 41.97 2.71
2923 6380 9.677567 GAAAACTGTCATTGTACATGTATGTTT 57.322 29.630 9.18 7.74 41.97 2.83
2924 6381 9.677567 AAAACTGTCATTGTACATGTATGTTTC 57.322 29.630 9.18 0.00 41.97 2.78
2925 6382 7.977789 ACTGTCATTGTACATGTATGTTTCA 57.022 32.000 9.18 0.00 41.97 2.69
2926 6383 8.032952 ACTGTCATTGTACATGTATGTTTCAG 57.967 34.615 9.18 14.53 41.97 3.02
2927 6384 6.841119 TGTCATTGTACATGTATGTTTCAGC 58.159 36.000 9.18 0.00 41.97 4.26
2928 6385 6.429385 TGTCATTGTACATGTATGTTTCAGCA 59.571 34.615 9.18 0.00 41.97 4.41
2929 6386 7.040823 TGTCATTGTACATGTATGTTTCAGCAA 60.041 33.333 9.18 6.31 41.97 3.91
2930 6387 7.271223 GTCATTGTACATGTATGTTTCAGCAAC 59.729 37.037 9.18 0.00 41.97 4.17
2931 6388 6.875948 TTGTACATGTATGTTTCAGCAACT 57.124 33.333 9.18 0.00 41.97 3.16
2932 6389 7.971183 TTGTACATGTATGTTTCAGCAACTA 57.029 32.000 9.18 0.00 41.97 2.24
2933 6390 7.595311 TGTACATGTATGTTTCAGCAACTAG 57.405 36.000 9.18 0.00 41.97 2.57
2934 6391 5.551760 ACATGTATGTTTCAGCAACTAGC 57.448 39.130 0.00 0.00 40.21 3.42
2936 6393 6.406370 ACATGTATGTTTCAGCAACTAGCTA 58.594 36.000 0.00 0.00 45.82 3.32
2937 6394 6.536582 ACATGTATGTTTCAGCAACTAGCTAG 59.463 38.462 19.44 19.44 45.82 3.42
2938 6395 7.795129 ACATGTATGTTTCAGCAACTAGCTAGT 60.795 37.037 20.95 20.95 45.82 2.57
2947 6404 3.600388 GCAACTAGCTAGTGATTGGTGT 58.400 45.455 26.70 5.89 41.15 4.16
2948 6405 3.372206 GCAACTAGCTAGTGATTGGTGTG 59.628 47.826 26.70 18.24 41.15 3.82
2949 6406 4.569943 CAACTAGCTAGTGATTGGTGTGT 58.430 43.478 26.70 4.37 36.50 3.72
2950 6407 4.891992 ACTAGCTAGTGATTGGTGTGTT 57.108 40.909 25.52 0.00 34.72 3.32
2951 6408 5.228945 ACTAGCTAGTGATTGGTGTGTTT 57.771 39.130 25.52 0.00 34.72 2.83
2952 6409 6.354794 ACTAGCTAGTGATTGGTGTGTTTA 57.645 37.500 25.52 0.00 34.72 2.01
2953 6410 6.398918 ACTAGCTAGTGATTGGTGTGTTTAG 58.601 40.000 25.52 0.00 34.72 1.85
2954 6411 5.483685 AGCTAGTGATTGGTGTGTTTAGA 57.516 39.130 0.00 0.00 0.00 2.10
2955 6412 5.865085 AGCTAGTGATTGGTGTGTTTAGAA 58.135 37.500 0.00 0.00 0.00 2.10
2956 6413 6.476378 AGCTAGTGATTGGTGTGTTTAGAAT 58.524 36.000 0.00 0.00 0.00 2.40
2957 6414 6.595716 AGCTAGTGATTGGTGTGTTTAGAATC 59.404 38.462 0.00 0.00 0.00 2.52
2958 6415 6.183360 GCTAGTGATTGGTGTGTTTAGAATCC 60.183 42.308 0.00 0.00 0.00 3.01
2959 6416 5.880901 AGTGATTGGTGTGTTTAGAATCCT 58.119 37.500 0.00 0.00 0.00 3.24
2960 6417 5.940470 AGTGATTGGTGTGTTTAGAATCCTC 59.060 40.000 0.00 0.00 0.00 3.71
2961 6418 5.940470 GTGATTGGTGTGTTTAGAATCCTCT 59.060 40.000 0.00 0.00 35.52 3.69
2962 6419 6.092807 GTGATTGGTGTGTTTAGAATCCTCTC 59.907 42.308 0.00 0.00 32.70 3.20
2963 6420 5.825593 TTGGTGTGTTTAGAATCCTCTCT 57.174 39.130 0.00 0.00 32.70 3.10
2964 6421 5.152623 TGGTGTGTTTAGAATCCTCTCTG 57.847 43.478 0.00 0.00 32.70 3.35
2965 6422 3.935828 GGTGTGTTTAGAATCCTCTCTGC 59.064 47.826 0.00 0.00 32.70 4.26
2966 6423 4.563580 GGTGTGTTTAGAATCCTCTCTGCA 60.564 45.833 0.00 0.00 32.70 4.41
2967 6424 5.181748 GTGTGTTTAGAATCCTCTCTGCAT 58.818 41.667 0.00 0.00 32.70 3.96
2968 6425 5.064452 GTGTGTTTAGAATCCTCTCTGCATG 59.936 44.000 0.00 0.00 32.70 4.06
2969 6426 5.181748 GTGTTTAGAATCCTCTCTGCATGT 58.818 41.667 0.00 0.00 32.70 3.21
2970 6427 5.645497 GTGTTTAGAATCCTCTCTGCATGTT 59.355 40.000 0.00 0.00 32.70 2.71
2971 6428 6.150140 GTGTTTAGAATCCTCTCTGCATGTTT 59.850 38.462 0.00 0.00 32.70 2.83
2972 6429 6.372659 TGTTTAGAATCCTCTCTGCATGTTTC 59.627 38.462 0.00 0.00 32.70 2.78
2973 6430 4.840716 AGAATCCTCTCTGCATGTTTCT 57.159 40.909 0.00 0.00 0.00 2.52
2974 6431 4.515361 AGAATCCTCTCTGCATGTTTCTG 58.485 43.478 0.00 0.00 0.00 3.02
2975 6432 2.775911 TCCTCTCTGCATGTTTCTGG 57.224 50.000 0.00 0.00 0.00 3.86
2976 6433 1.980765 TCCTCTCTGCATGTTTCTGGT 59.019 47.619 0.00 0.00 0.00 4.00
2977 6434 2.373169 TCCTCTCTGCATGTTTCTGGTT 59.627 45.455 0.00 0.00 0.00 3.67
2978 6435 2.746362 CCTCTCTGCATGTTTCTGGTTC 59.254 50.000 0.00 0.00 0.00 3.62
2979 6436 3.405831 CTCTCTGCATGTTTCTGGTTCA 58.594 45.455 0.00 0.00 0.00 3.18
2980 6437 3.405831 TCTCTGCATGTTTCTGGTTCAG 58.594 45.455 0.00 0.00 0.00 3.02
2981 6438 3.144506 CTCTGCATGTTTCTGGTTCAGT 58.855 45.455 0.00 0.00 32.61 3.41
2982 6439 4.040339 TCTCTGCATGTTTCTGGTTCAGTA 59.960 41.667 0.00 0.00 32.61 2.74
2983 6440 4.910195 TCTGCATGTTTCTGGTTCAGTAT 58.090 39.130 0.00 0.00 32.61 2.12
2984 6441 6.048732 TCTGCATGTTTCTGGTTCAGTATA 57.951 37.500 0.00 0.00 32.61 1.47
2985 6442 6.653020 TCTGCATGTTTCTGGTTCAGTATAT 58.347 36.000 0.00 0.00 32.61 0.86
2986 6443 6.539826 TCTGCATGTTTCTGGTTCAGTATATG 59.460 38.462 0.00 0.00 32.61 1.78
2987 6444 6.179756 TGCATGTTTCTGGTTCAGTATATGT 58.820 36.000 0.00 0.00 32.61 2.29
3218 6675 5.331876 GTCAACTATGTGTTCTAGCCTCT 57.668 43.478 0.00 0.00 36.63 3.69
3219 6676 5.725362 GTCAACTATGTGTTCTAGCCTCTT 58.275 41.667 0.00 0.00 36.63 2.85
3220 6677 6.166982 GTCAACTATGTGTTCTAGCCTCTTT 58.833 40.000 0.00 0.00 36.63 2.52
3221 6678 6.651225 GTCAACTATGTGTTCTAGCCTCTTTT 59.349 38.462 0.00 0.00 36.63 2.27
3222 6679 7.173390 GTCAACTATGTGTTCTAGCCTCTTTTT 59.827 37.037 0.00 0.00 36.63 1.94
3258 6715 7.639162 AGTACAAACTAGAAGATGTTTCGTG 57.361 36.000 0.00 0.00 34.60 4.35
3259 6716 7.431249 AGTACAAACTAGAAGATGTTTCGTGA 58.569 34.615 0.00 0.00 34.60 4.35
3260 6717 8.088981 AGTACAAACTAGAAGATGTTTCGTGAT 58.911 33.333 0.00 0.00 34.60 3.06
3261 6718 7.730364 ACAAACTAGAAGATGTTTCGTGATT 57.270 32.000 0.00 0.00 34.60 2.57
3262 6719 7.797819 ACAAACTAGAAGATGTTTCGTGATTC 58.202 34.615 0.00 0.00 34.60 2.52
3263 6720 7.441157 ACAAACTAGAAGATGTTTCGTGATTCA 59.559 33.333 0.00 0.00 34.60 2.57
3264 6721 7.962964 AACTAGAAGATGTTTCGTGATTCAA 57.037 32.000 0.00 0.00 0.00 2.69
3265 6722 7.588143 ACTAGAAGATGTTTCGTGATTCAAG 57.412 36.000 0.00 0.00 0.00 3.02
3266 6723 5.869753 AGAAGATGTTTCGTGATTCAAGG 57.130 39.130 0.00 0.00 0.00 3.61
3267 6724 5.308825 AGAAGATGTTTCGTGATTCAAGGT 58.691 37.500 0.00 0.00 0.00 3.50
3268 6725 5.409826 AGAAGATGTTTCGTGATTCAAGGTC 59.590 40.000 0.00 0.00 0.00 3.85
3269 6726 3.679980 AGATGTTTCGTGATTCAAGGTCG 59.320 43.478 0.00 0.00 0.00 4.79
3270 6727 3.100658 TGTTTCGTGATTCAAGGTCGA 57.899 42.857 0.00 0.00 0.00 4.20
3271 6728 3.057019 TGTTTCGTGATTCAAGGTCGAG 58.943 45.455 0.00 0.00 32.39 4.04
3272 6729 2.363788 TTCGTGATTCAAGGTCGAGG 57.636 50.000 0.00 0.00 32.39 4.63
3273 6730 1.541379 TCGTGATTCAAGGTCGAGGA 58.459 50.000 0.00 0.00 0.00 3.71
3274 6731 2.100197 TCGTGATTCAAGGTCGAGGAT 58.900 47.619 0.00 0.00 0.00 3.24
3275 6732 2.159240 TCGTGATTCAAGGTCGAGGATG 60.159 50.000 0.00 0.00 0.00 3.51
3276 6733 2.159240 CGTGATTCAAGGTCGAGGATGA 60.159 50.000 0.00 0.00 0.00 2.92
3277 6734 3.190874 GTGATTCAAGGTCGAGGATGAC 58.809 50.000 0.00 0.00 38.17 3.06
3278 6735 2.831526 TGATTCAAGGTCGAGGATGACA 59.168 45.455 0.00 0.00 40.72 3.58
3279 6736 3.260632 TGATTCAAGGTCGAGGATGACAA 59.739 43.478 0.00 0.00 40.72 3.18
3280 6737 3.762407 TTCAAGGTCGAGGATGACAAA 57.238 42.857 0.00 0.00 40.72 2.83
3281 6738 3.040147 TCAAGGTCGAGGATGACAAAC 57.960 47.619 0.00 0.00 40.72 2.93
3282 6739 2.367241 TCAAGGTCGAGGATGACAAACA 59.633 45.455 0.00 0.00 40.72 2.83
3283 6740 3.007940 TCAAGGTCGAGGATGACAAACAT 59.992 43.478 0.00 0.00 40.72 2.71
3284 6741 3.703001 AGGTCGAGGATGACAAACATT 57.297 42.857 0.00 0.00 40.72 2.71
3285 6742 4.819105 AGGTCGAGGATGACAAACATTA 57.181 40.909 0.00 0.00 40.72 1.90
3286 6743 5.359194 AGGTCGAGGATGACAAACATTAT 57.641 39.130 0.00 0.00 40.72 1.28
3287 6744 6.479972 AGGTCGAGGATGACAAACATTATA 57.520 37.500 0.00 0.00 40.72 0.98
3288 6745 7.067496 AGGTCGAGGATGACAAACATTATAT 57.933 36.000 0.00 0.00 40.72 0.86
3289 6746 6.931281 AGGTCGAGGATGACAAACATTATATG 59.069 38.462 0.00 0.00 40.72 1.78
3290 6747 6.706270 GGTCGAGGATGACAAACATTATATGT 59.294 38.462 0.00 0.00 42.20 2.29
3291 6748 7.870954 GGTCGAGGATGACAAACATTATATGTA 59.129 37.037 0.00 0.00 40.70 2.29
3292 6749 8.916654 GTCGAGGATGACAAACATTATATGTAG 58.083 37.037 0.00 0.00 39.57 2.74
3293 6750 8.638873 TCGAGGATGACAAACATTATATGTAGT 58.361 33.333 0.00 0.00 44.07 2.73
3294 6751 8.703336 CGAGGATGACAAACATTATATGTAGTG 58.297 37.037 0.00 0.00 44.07 2.74
3295 6752 9.764363 GAGGATGACAAACATTATATGTAGTGA 57.236 33.333 0.00 0.80 44.07 3.41
3323 6780 4.669206 TTTTTCTTTGCTCTGCCATTCA 57.331 36.364 0.00 0.00 0.00 2.57
3324 6781 4.669206 TTTTCTTTGCTCTGCCATTCAA 57.331 36.364 0.00 0.00 0.00 2.69
3325 6782 4.877378 TTTCTTTGCTCTGCCATTCAAT 57.123 36.364 0.00 0.00 0.00 2.57
3326 6783 5.981088 TTTCTTTGCTCTGCCATTCAATA 57.019 34.783 0.00 0.00 0.00 1.90
3327 6784 4.970662 TCTTTGCTCTGCCATTCAATAC 57.029 40.909 0.00 0.00 0.00 1.89
3328 6785 3.374988 TCTTTGCTCTGCCATTCAATACG 59.625 43.478 0.00 0.00 0.00 3.06
3329 6786 2.689553 TGCTCTGCCATTCAATACGA 57.310 45.000 0.00 0.00 0.00 3.43
3330 6787 2.554142 TGCTCTGCCATTCAATACGAG 58.446 47.619 0.00 0.00 0.00 4.18
3331 6788 1.262683 GCTCTGCCATTCAATACGAGC 59.737 52.381 0.00 0.00 33.87 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.814793 TTTAGTATTGCGCAGTGGCA 58.185 45.000 16.50 0.00 42.12 4.92
21 22 3.468770 TCGCCAGTTGCAACTTTTAGTA 58.531 40.909 29.23 10.28 41.33 1.82
37 38 4.689071 AGTTGTAACATTATCGATCGCCA 58.311 39.130 11.09 0.00 0.00 5.69
39 40 6.988109 ACTAGTTGTAACATTATCGATCGC 57.012 37.500 11.09 0.00 0.00 4.58
60 61 3.432252 CGGTTGAAGCTTTCGACAATACT 59.568 43.478 0.00 0.00 44.30 2.12
155 156 3.446310 TGAAGCTTCGTATATTGCCGA 57.554 42.857 21.11 0.00 0.00 5.54
160 161 2.870411 GCCGGTTGAAGCTTCGTATATT 59.130 45.455 21.11 0.00 0.00 1.28
183 184 2.887337 CAACTTTTTGCGTTTCCCTGT 58.113 42.857 0.00 0.00 0.00 4.00
192 193 8.721705 TGTGTCAACAATTGCAACTTTTTGCG 62.722 38.462 0.00 0.00 46.66 4.85
256 366 0.880278 TCGCTGCAGCTTTTTCTCGT 60.880 50.000 34.22 0.00 39.32 4.18
275 386 2.030412 TGTGCATCAACGGCTCGT 59.970 55.556 0.00 0.00 43.97 4.18
325 436 2.189499 GGCATCGGTTCCAGCATCC 61.189 63.158 0.00 0.00 0.00 3.51
360 471 2.121963 ACTGGTCTGCCCCTTCCA 60.122 61.111 0.00 0.00 0.00 3.53
437 548 0.179073 GCCTCACTATGCCATCGTGT 60.179 55.000 8.94 0.00 0.00 4.49
451 562 3.680786 CCACACTCGTCGGCCTCA 61.681 66.667 0.00 0.00 0.00 3.86
485 596 3.850098 CTTCGGCCACCCAGCTTGT 62.850 63.158 2.24 0.00 0.00 3.16
535 646 0.249120 AGAAATCGCACGTGGATCCA 59.751 50.000 18.88 11.44 0.00 3.41
560 671 0.106419 AAAAGCCAAACACTCGGGGA 60.106 50.000 0.00 0.00 0.00 4.81
574 685 4.157472 CCTCAAATCTCTTCCCAGAAAAGC 59.843 45.833 0.00 0.00 0.00 3.51
578 689 5.786121 ATTCCTCAAATCTCTTCCCAGAA 57.214 39.130 0.00 0.00 0.00 3.02
597 708 4.553547 GCTGTCTGATGCGTCCATTTATTC 60.554 45.833 2.83 0.00 0.00 1.75
602 713 0.251354 AGCTGTCTGATGCGTCCATT 59.749 50.000 2.83 0.00 0.00 3.16
624 735 2.673368 GCTCGTTCCATCTAACCTTGTG 59.327 50.000 0.00 0.00 0.00 3.33
679 790 4.221422 GCCAGTGATAGGCGCCGA 62.221 66.667 23.20 18.26 43.15 5.54
708 819 8.175069 GTGCTTTGACATGTCGATCTTTAATTA 58.825 33.333 20.54 0.13 0.00 1.40
711 822 5.468409 TGTGCTTTGACATGTCGATCTTTAA 59.532 36.000 20.54 4.97 0.00 1.52
789 3585 1.845809 CTGAAGTGGGCACAACTCGC 61.846 60.000 0.00 0.00 0.00 5.03
790 3586 0.532862 ACTGAAGTGGGCACAACTCG 60.533 55.000 0.00 0.00 0.00 4.18
867 3663 2.605818 TCGGCGGTTCTTCATATTTTCG 59.394 45.455 7.21 0.00 0.00 3.46
940 3740 2.602676 GGGCTGCTAGGGTTGTGGA 61.603 63.158 0.00 0.00 0.00 4.02
1420 4241 4.385405 ACAGAGCACCGAGGCAGC 62.385 66.667 1.23 0.00 35.83 5.25
1499 4354 1.674057 CTGGCTTCCTCGTCAAGGT 59.326 57.895 0.00 0.00 46.32 3.50
1545 4400 0.251653 AGCTCCAGTTACCCGTCTCA 60.252 55.000 0.00 0.00 0.00 3.27
1592 4447 3.064545 GGTGAAGCTGATTTCAATCTCGG 59.935 47.826 0.00 0.00 38.69 4.63
1593 4448 3.686241 TGGTGAAGCTGATTTCAATCTCG 59.314 43.478 0.00 0.00 38.69 4.04
1623 4478 3.386379 GTCTCCGACGAGAACACTG 57.614 57.895 0.00 0.00 46.74 3.66
1743 4718 1.754745 GATAGGAGCGATGGGGCAA 59.245 57.895 0.00 0.00 34.64 4.52
1807 5223 2.573915 ACCAGAGGGAGAGGTTGAAATC 59.426 50.000 0.00 0.00 38.05 2.17
1822 5238 1.992277 CCACCTCCCTCCACCAGAG 60.992 68.421 0.00 0.00 42.83 3.35
1893 5309 2.267642 TCGCCAACGGGGAGAATG 59.732 61.111 0.00 0.00 43.06 2.67
1951 5370 4.739228 CGTGATTGCAAAAACAATGACAGA 59.261 37.500 1.71 0.00 42.20 3.41
2046 5471 5.234466 AGAGTGCCCATGTAATATCTTCC 57.766 43.478 0.00 0.00 0.00 3.46
2162 5600 3.156293 TGTGGCACAGCAACTGAAATAT 58.844 40.909 17.96 0.00 41.80 1.28
2269 5719 0.962356 GCCACAACACCTGATCCTGG 60.962 60.000 0.00 0.00 0.00 4.45
2275 5725 0.819259 GCTTCAGCCACAACACCTGA 60.819 55.000 0.00 0.00 34.07 3.86
2299 5749 0.674581 TCGCCAAGTCCAGCTTCATG 60.675 55.000 0.00 0.00 34.69 3.07
2312 5765 2.049888 TTATGCATCACCATCGCCAA 57.950 45.000 0.19 0.00 0.00 4.52
2325 5778 2.026641 GGCCTGCTTGAGATTTATGCA 58.973 47.619 0.00 0.00 0.00 3.96
2346 5799 0.868406 CTGAACTTCCGTGCTTGGAC 59.132 55.000 0.00 0.00 37.89 4.02
2355 5808 4.739716 CCAAAACAACAATCTGAACTTCCG 59.260 41.667 0.00 0.00 0.00 4.30
2403 5860 2.057137 ATCCCACCATCCATCAAACG 57.943 50.000 0.00 0.00 0.00 3.60
2416 5873 4.408182 AGACATAACACAGCTATCCCAC 57.592 45.455 0.00 0.00 0.00 4.61
2422 5879 7.386848 GGTTCTTAACAAGACATAACACAGCTA 59.613 37.037 0.00 0.00 37.23 3.32
2425 5882 7.730364 AGGTTCTTAACAAGACATAACACAG 57.270 36.000 0.00 0.00 37.23 3.66
2452 5909 8.565896 TGATAGCATGTTTAACAAGAACAGAT 57.434 30.769 0.66 0.00 40.04 2.90
2467 5924 7.013823 AGCAACTAGGATATTGATAGCATGT 57.986 36.000 0.00 0.00 0.00 3.21
2475 5932 5.189736 AGGTGTTGAGCAACTAGGATATTGA 59.810 40.000 13.80 0.00 44.71 2.57
2482 5939 2.851195 ACAAGGTGTTGAGCAACTAGG 58.149 47.619 13.80 3.22 46.08 3.02
2486 5943 3.502191 TGAAACAAGGTGTTGAGCAAC 57.498 42.857 6.41 6.41 40.14 4.17
2487 5944 4.734398 AATGAAACAAGGTGTTGAGCAA 57.266 36.364 0.00 0.00 40.14 3.91
2488 5945 4.159321 TGAAATGAAACAAGGTGTTGAGCA 59.841 37.500 0.00 0.00 40.14 4.26
2489 5946 4.681744 TGAAATGAAACAAGGTGTTGAGC 58.318 39.130 0.00 0.00 40.14 4.26
2490 5947 8.870160 TTAATGAAATGAAACAAGGTGTTGAG 57.130 30.769 0.00 0.00 40.14 3.02
2491 5948 9.311916 CTTTAATGAAATGAAACAAGGTGTTGA 57.688 29.630 0.00 0.00 40.14 3.18
2492 5949 9.097257 ACTTTAATGAAATGAAACAAGGTGTTG 57.903 29.630 0.00 0.00 40.14 3.33
2496 5953 9.927668 CCATACTTTAATGAAATGAAACAAGGT 57.072 29.630 0.00 0.00 0.00 3.50
2497 5954 9.369904 CCCATACTTTAATGAAATGAAACAAGG 57.630 33.333 0.00 0.00 0.00 3.61
2501 5958 9.586435 CCTTCCCATACTTTAATGAAATGAAAC 57.414 33.333 0.00 0.00 0.00 2.78
2502 5959 9.320295 ACCTTCCCATACTTTAATGAAATGAAA 57.680 29.630 0.00 0.00 0.00 2.69
2503 5960 8.893563 ACCTTCCCATACTTTAATGAAATGAA 57.106 30.769 0.00 0.00 0.00 2.57
2504 5961 8.748412 CAACCTTCCCATACTTTAATGAAATGA 58.252 33.333 0.00 0.00 0.00 2.57
2505 5962 7.492344 GCAACCTTCCCATACTTTAATGAAATG 59.508 37.037 0.00 0.00 0.00 2.32
2506 5963 7.400052 AGCAACCTTCCCATACTTTAATGAAAT 59.600 33.333 0.00 0.00 0.00 2.17
2507 5964 6.723977 AGCAACCTTCCCATACTTTAATGAAA 59.276 34.615 0.00 0.00 0.00 2.69
2508 5965 6.252995 AGCAACCTTCCCATACTTTAATGAA 58.747 36.000 0.00 0.00 0.00 2.57
2518 5975 3.330701 AGACAGAAAGCAACCTTCCCATA 59.669 43.478 0.00 0.00 0.00 2.74
2519 5976 2.108952 AGACAGAAAGCAACCTTCCCAT 59.891 45.455 0.00 0.00 0.00 4.00
2521 5978 2.278332 AGACAGAAAGCAACCTTCCC 57.722 50.000 0.00 0.00 0.00 3.97
2522 5979 5.767816 TTTTAGACAGAAAGCAACCTTCC 57.232 39.130 0.00 0.00 0.00 3.46
2532 5989 4.059511 TGGCGTCGATTTTTAGACAGAAA 58.940 39.130 0.00 0.00 37.23 2.52
2535 5992 3.432252 ACTTGGCGTCGATTTTTAGACAG 59.568 43.478 0.00 0.00 37.23 3.51
2548 6005 2.697431 TATGCACAAAACTTGGCGTC 57.303 45.000 0.00 0.00 34.12 5.19
2562 6019 8.723311 GGTGTAAGTTTATACAGTTGTTATGCA 58.277 33.333 0.00 0.00 36.51 3.96
2579 6036 9.797556 GTGTGAAAAATAGAAAAGGTGTAAGTT 57.202 29.630 0.00 0.00 0.00 2.66
2580 6037 8.126700 CGTGTGAAAAATAGAAAAGGTGTAAGT 58.873 33.333 0.00 0.00 0.00 2.24
2581 6038 8.126700 ACGTGTGAAAAATAGAAAAGGTGTAAG 58.873 33.333 0.00 0.00 0.00 2.34
2582 6039 7.987649 ACGTGTGAAAAATAGAAAAGGTGTAA 58.012 30.769 0.00 0.00 0.00 2.41
2583 6040 7.496591 AGACGTGTGAAAAATAGAAAAGGTGTA 59.503 33.333 0.00 0.00 0.00 2.90
2584 6041 6.317893 AGACGTGTGAAAAATAGAAAAGGTGT 59.682 34.615 0.00 0.00 0.00 4.16
2585 6042 6.632834 CAGACGTGTGAAAAATAGAAAAGGTG 59.367 38.462 6.93 0.00 0.00 4.00
2586 6043 6.317893 ACAGACGTGTGAAAAATAGAAAAGGT 59.682 34.615 20.80 0.00 34.75 3.50
2587 6044 6.725246 ACAGACGTGTGAAAAATAGAAAAGG 58.275 36.000 20.80 0.00 34.75 3.11
2588 6045 8.614994 AAACAGACGTGTGAAAAATAGAAAAG 57.385 30.769 20.80 0.00 36.84 2.27
2589 6046 8.973835 AAAACAGACGTGTGAAAAATAGAAAA 57.026 26.923 20.80 0.00 36.84 2.29
2590 6047 8.973835 AAAAACAGACGTGTGAAAAATAGAAA 57.026 26.923 20.80 0.00 36.84 2.52
2614 6071 9.651913 CAGAAAAATAGCCTAAAGCCAAATAAA 57.348 29.630 0.00 0.00 45.47 1.40
2615 6072 8.811994 ACAGAAAAATAGCCTAAAGCCAAATAA 58.188 29.630 0.00 0.00 45.47 1.40
2616 6073 8.361169 ACAGAAAAATAGCCTAAAGCCAAATA 57.639 30.769 0.00 0.00 45.47 1.40
2617 6074 7.179160 AGACAGAAAAATAGCCTAAAGCCAAAT 59.821 33.333 0.00 0.00 45.47 2.32
2618 6075 6.493458 AGACAGAAAAATAGCCTAAAGCCAAA 59.507 34.615 0.00 0.00 45.47 3.28
2619 6076 6.010219 AGACAGAAAAATAGCCTAAAGCCAA 58.990 36.000 0.00 0.00 45.47 4.52
2620 6077 5.415701 CAGACAGAAAAATAGCCTAAAGCCA 59.584 40.000 0.00 0.00 45.47 4.75
2621 6078 5.416013 ACAGACAGAAAAATAGCCTAAAGCC 59.584 40.000 0.00 0.00 45.47 4.35
2622 6079 6.372937 AGACAGACAGAAAAATAGCCTAAAGC 59.627 38.462 0.00 0.00 44.25 3.51
2623 6080 7.604164 TCAGACAGACAGAAAAATAGCCTAAAG 59.396 37.037 0.00 0.00 0.00 1.85
2624 6081 7.450074 TCAGACAGACAGAAAAATAGCCTAAA 58.550 34.615 0.00 0.00 0.00 1.85
2625 6082 7.004555 TCAGACAGACAGAAAAATAGCCTAA 57.995 36.000 0.00 0.00 0.00 2.69
2626 6083 6.605471 TCAGACAGACAGAAAAATAGCCTA 57.395 37.500 0.00 0.00 0.00 3.93
2627 6084 5.489792 TCAGACAGACAGAAAAATAGCCT 57.510 39.130 0.00 0.00 0.00 4.58
2628 6085 6.112058 AGATCAGACAGACAGAAAAATAGCC 58.888 40.000 0.00 0.00 0.00 3.93
2629 6086 6.019961 CGAGATCAGACAGACAGAAAAATAGC 60.020 42.308 0.00 0.00 0.00 2.97
2630 6087 6.019961 GCGAGATCAGACAGACAGAAAAATAG 60.020 42.308 0.00 0.00 0.00 1.73
2631 6088 5.807520 GCGAGATCAGACAGACAGAAAAATA 59.192 40.000 0.00 0.00 0.00 1.40
2632 6089 4.629200 GCGAGATCAGACAGACAGAAAAAT 59.371 41.667 0.00 0.00 0.00 1.82
2633 6090 3.990469 GCGAGATCAGACAGACAGAAAAA 59.010 43.478 0.00 0.00 0.00 1.94
2634 6091 3.005791 TGCGAGATCAGACAGACAGAAAA 59.994 43.478 0.00 0.00 0.00 2.29
2635 6092 2.558359 TGCGAGATCAGACAGACAGAAA 59.442 45.455 0.00 0.00 0.00 2.52
2636 6093 2.095008 GTGCGAGATCAGACAGACAGAA 60.095 50.000 0.00 0.00 0.00 3.02
2637 6094 1.470494 GTGCGAGATCAGACAGACAGA 59.530 52.381 0.00 0.00 0.00 3.41
2638 6095 1.793353 CGTGCGAGATCAGACAGACAG 60.793 57.143 0.00 0.00 0.00 3.51
2639 6096 0.169009 CGTGCGAGATCAGACAGACA 59.831 55.000 0.00 0.00 0.00 3.41
2640 6097 0.448197 TCGTGCGAGATCAGACAGAC 59.552 55.000 0.00 0.00 0.00 3.51
2641 6098 1.165270 TTCGTGCGAGATCAGACAGA 58.835 50.000 0.00 0.00 0.00 3.41
2642 6099 2.115595 GATTCGTGCGAGATCAGACAG 58.884 52.381 0.00 0.00 0.00 3.51
2643 6100 1.745653 AGATTCGTGCGAGATCAGACA 59.254 47.619 14.23 0.00 0.00 3.41
2644 6101 2.032799 AGAGATTCGTGCGAGATCAGAC 59.967 50.000 14.23 8.48 0.00 3.51
2645 6102 2.032675 CAGAGATTCGTGCGAGATCAGA 59.967 50.000 14.23 0.00 0.00 3.27
2646 6103 2.383450 CAGAGATTCGTGCGAGATCAG 58.617 52.381 14.23 0.00 0.00 2.90
2647 6104 1.534805 GCAGAGATTCGTGCGAGATCA 60.535 52.381 14.23 0.00 0.00 2.92
2648 6105 1.127701 GCAGAGATTCGTGCGAGATC 58.872 55.000 0.00 2.38 0.00 2.75
2649 6106 3.264666 GCAGAGATTCGTGCGAGAT 57.735 52.632 0.00 0.00 0.00 2.75
2650 6107 4.794164 GCAGAGATTCGTGCGAGA 57.206 55.556 0.00 0.00 0.00 4.04
2654 6111 3.918220 CGCCGCAGAGATTCGTGC 61.918 66.667 4.47 4.47 36.27 5.34
2655 6112 3.918220 GCGCCGCAGAGATTCGTG 61.918 66.667 3.15 0.00 0.00 4.35
2658 6115 3.326210 CTCGCGCCGCAGAGATTC 61.326 66.667 20.74 0.00 33.54 2.52
2659 6116 4.135153 ACTCGCGCCGCAGAGATT 62.135 61.111 28.16 11.42 34.90 2.40
2660 6117 4.862092 CACTCGCGCCGCAGAGAT 62.862 66.667 28.16 14.99 34.90 2.75
2683 6140 4.162690 AGATCCAGTTCGCCCGCC 62.163 66.667 0.00 0.00 0.00 6.13
2684 6141 2.586357 GAGATCCAGTTCGCCCGC 60.586 66.667 0.00 0.00 0.00 6.13
2685 6142 2.278857 CGAGATCCAGTTCGCCCG 60.279 66.667 0.00 0.00 0.00 6.13
2686 6143 2.107141 CCGAGATCCAGTTCGCCC 59.893 66.667 0.00 0.00 35.58 6.13
2687 6144 2.107141 CCCGAGATCCAGTTCGCC 59.893 66.667 0.00 0.00 35.58 5.54
2688 6145 2.107141 CCCCGAGATCCAGTTCGC 59.893 66.667 0.00 0.00 35.58 4.70
2689 6146 2.107141 GCCCCGAGATCCAGTTCG 59.893 66.667 0.00 0.00 36.62 3.95
2690 6147 2.107141 CGCCCCGAGATCCAGTTC 59.893 66.667 0.00 0.00 0.00 3.01
2691 6148 3.470888 CCGCCCCGAGATCCAGTT 61.471 66.667 0.00 0.00 0.00 3.16
2696 6153 4.530857 CACACCCGCCCCGAGATC 62.531 72.222 0.00 0.00 0.00 2.75
2706 6163 4.424711 CACCATCCCCCACACCCG 62.425 72.222 0.00 0.00 0.00 5.28
2707 6164 4.060667 CCACCATCCCCCACACCC 62.061 72.222 0.00 0.00 0.00 4.61
2708 6165 2.380571 AAACCACCATCCCCCACACC 62.381 60.000 0.00 0.00 0.00 4.16
2709 6166 0.898326 GAAACCACCATCCCCCACAC 60.898 60.000 0.00 0.00 0.00 3.82
2710 6167 1.364317 TGAAACCACCATCCCCCACA 61.364 55.000 0.00 0.00 0.00 4.17
2711 6168 0.611896 CTGAAACCACCATCCCCCAC 60.612 60.000 0.00 0.00 0.00 4.61
2712 6169 0.774096 TCTGAAACCACCATCCCCCA 60.774 55.000 0.00 0.00 0.00 4.96
2713 6170 0.631212 ATCTGAAACCACCATCCCCC 59.369 55.000 0.00 0.00 0.00 5.40
2714 6171 2.241176 TGTATCTGAAACCACCATCCCC 59.759 50.000 0.00 0.00 0.00 4.81
2715 6172 3.644966 TGTATCTGAAACCACCATCCC 57.355 47.619 0.00 0.00 0.00 3.85
2716 6173 4.580580 GGAATGTATCTGAAACCACCATCC 59.419 45.833 0.00 0.00 0.00 3.51
2717 6174 4.273480 CGGAATGTATCTGAAACCACCATC 59.727 45.833 0.00 0.00 36.44 3.51
2718 6175 4.199310 CGGAATGTATCTGAAACCACCAT 58.801 43.478 0.00 0.00 36.44 3.55
2719 6176 3.605634 CGGAATGTATCTGAAACCACCA 58.394 45.455 0.00 0.00 36.44 4.17
2720 6177 2.354821 GCGGAATGTATCTGAAACCACC 59.645 50.000 0.00 0.00 36.44 4.61
2721 6178 3.270877 AGCGGAATGTATCTGAAACCAC 58.729 45.455 0.00 0.00 36.44 4.16
2722 6179 3.055458 TGAGCGGAATGTATCTGAAACCA 60.055 43.478 0.00 0.00 36.44 3.67
2723 6180 3.531538 TGAGCGGAATGTATCTGAAACC 58.468 45.455 0.00 0.00 36.44 3.27
2724 6181 5.065218 ACATTGAGCGGAATGTATCTGAAAC 59.935 40.000 12.96 0.00 43.32 2.78
2725 6182 5.185454 ACATTGAGCGGAATGTATCTGAAA 58.815 37.500 12.96 0.00 43.32 2.69
2726 6183 4.769688 ACATTGAGCGGAATGTATCTGAA 58.230 39.130 12.96 0.00 43.32 3.02
2727 6184 4.406648 ACATTGAGCGGAATGTATCTGA 57.593 40.909 12.96 0.00 43.32 3.27
2728 6185 4.571984 TGAACATTGAGCGGAATGTATCTG 59.428 41.667 14.44 0.00 44.15 2.90
2729 6186 4.769688 TGAACATTGAGCGGAATGTATCT 58.230 39.130 14.44 2.61 44.15 1.98
2730 6187 4.572389 ACTGAACATTGAGCGGAATGTATC 59.428 41.667 14.44 13.65 44.15 2.24
2731 6188 4.517285 ACTGAACATTGAGCGGAATGTAT 58.483 39.130 14.44 7.25 44.15 2.29
2732 6189 3.937814 ACTGAACATTGAGCGGAATGTA 58.062 40.909 14.44 2.71 44.15 2.29
2733 6190 2.783135 ACTGAACATTGAGCGGAATGT 58.217 42.857 9.77 9.77 46.35 2.71
2734 6191 4.944962 TTACTGAACATTGAGCGGAATG 57.055 40.909 8.66 8.66 38.97 2.67
2735 6192 5.003804 ACTTTACTGAACATTGAGCGGAAT 58.996 37.500 0.00 0.00 0.00 3.01
2736 6193 4.213270 CACTTTACTGAACATTGAGCGGAA 59.787 41.667 0.00 0.00 0.00 4.30
2737 6194 3.745975 CACTTTACTGAACATTGAGCGGA 59.254 43.478 0.00 0.00 0.00 5.54
2738 6195 3.498397 ACACTTTACTGAACATTGAGCGG 59.502 43.478 0.00 0.00 0.00 5.52
2739 6196 4.377431 GGACACTTTACTGAACATTGAGCG 60.377 45.833 0.00 0.00 0.00 5.03
2740 6197 4.757149 AGGACACTTTACTGAACATTGAGC 59.243 41.667 0.00 0.00 0.00 4.26
2741 6198 5.991606 TCAGGACACTTTACTGAACATTGAG 59.008 40.000 0.00 0.00 38.22 3.02
2742 6199 5.924356 TCAGGACACTTTACTGAACATTGA 58.076 37.500 0.00 0.00 38.22 2.57
2743 6200 6.618287 TTCAGGACACTTTACTGAACATTG 57.382 37.500 0.00 0.00 43.90 2.82
2768 6225 4.994852 AGTAGCAGATACTGAACGCAAAAA 59.005 37.500 0.00 0.00 43.35 1.94
2769 6226 4.566004 AGTAGCAGATACTGAACGCAAAA 58.434 39.130 0.00 0.00 43.35 2.44
2770 6227 4.082190 AGAGTAGCAGATACTGAACGCAAA 60.082 41.667 2.20 0.00 45.06 3.68
2771 6228 3.444034 AGAGTAGCAGATACTGAACGCAA 59.556 43.478 2.20 0.00 45.06 4.85
2772 6229 3.017442 AGAGTAGCAGATACTGAACGCA 58.983 45.455 2.20 0.00 45.06 5.24
2773 6230 3.623863 GAGAGTAGCAGATACTGAACGC 58.376 50.000 2.20 2.51 45.06 4.84
2774 6231 3.556365 TCGAGAGTAGCAGATACTGAACG 59.444 47.826 2.20 6.36 45.06 3.95
2775 6232 5.237561 TGATCGAGAGTAGCAGATACTGAAC 59.762 44.000 2.20 0.00 45.06 3.18
2776 6233 5.368989 TGATCGAGAGTAGCAGATACTGAA 58.631 41.667 2.20 0.00 45.06 3.02
2777 6234 4.962155 TGATCGAGAGTAGCAGATACTGA 58.038 43.478 2.20 0.00 45.06 3.41
2778 6235 4.994217 TCTGATCGAGAGTAGCAGATACTG 59.006 45.833 2.20 0.00 45.06 2.74
2780 6237 4.153475 GGTCTGATCGAGAGTAGCAGATAC 59.847 50.000 0.00 0.00 36.57 2.24
2781 6238 4.202367 TGGTCTGATCGAGAGTAGCAGATA 60.202 45.833 0.00 0.00 36.57 1.98
2782 6239 3.146066 GGTCTGATCGAGAGTAGCAGAT 58.854 50.000 0.00 0.00 36.57 2.90
2783 6240 2.092914 TGGTCTGATCGAGAGTAGCAGA 60.093 50.000 0.00 0.00 33.72 4.26
2784 6241 2.293170 TGGTCTGATCGAGAGTAGCAG 58.707 52.381 0.00 0.00 0.00 4.24
2785 6242 2.420058 TGGTCTGATCGAGAGTAGCA 57.580 50.000 0.00 0.00 0.00 3.49
2786 6243 2.606795 GCATGGTCTGATCGAGAGTAGC 60.607 54.545 0.00 0.00 0.00 3.58
2787 6244 2.350293 CGCATGGTCTGATCGAGAGTAG 60.350 54.545 0.00 0.00 0.00 2.57
2788 6245 1.604278 CGCATGGTCTGATCGAGAGTA 59.396 52.381 0.00 0.00 0.00 2.59
2789 6246 0.383590 CGCATGGTCTGATCGAGAGT 59.616 55.000 0.00 0.00 0.00 3.24
2790 6247 0.318529 CCGCATGGTCTGATCGAGAG 60.319 60.000 0.00 0.00 0.00 3.20
2791 6248 1.735973 CCGCATGGTCTGATCGAGA 59.264 57.895 0.00 0.00 0.00 4.04
2792 6249 4.333095 CCGCATGGTCTGATCGAG 57.667 61.111 0.00 0.00 0.00 4.04
2802 6259 4.997565 ACTGAATTAAATCAACCGCATGG 58.002 39.130 0.00 0.00 42.84 3.66
2803 6260 6.949578 AAACTGAATTAAATCAACCGCATG 57.050 33.333 0.00 0.00 0.00 4.06
2804 6261 6.368516 CCAAAACTGAATTAAATCAACCGCAT 59.631 34.615 0.00 0.00 0.00 4.73
2805 6262 5.694006 CCAAAACTGAATTAAATCAACCGCA 59.306 36.000 0.00 0.00 0.00 5.69
2806 6263 5.389411 GCCAAAACTGAATTAAATCAACCGC 60.389 40.000 0.00 0.00 0.00 5.68
2807 6264 5.120053 GGCCAAAACTGAATTAAATCAACCG 59.880 40.000 0.00 0.00 0.00 4.44
2808 6265 5.411361 GGGCCAAAACTGAATTAAATCAACC 59.589 40.000 4.39 0.00 0.00 3.77
2809 6266 6.147656 CAGGGCCAAAACTGAATTAAATCAAC 59.852 38.462 6.18 0.00 36.86 3.18
2810 6267 6.042552 TCAGGGCCAAAACTGAATTAAATCAA 59.957 34.615 6.18 0.00 40.51 2.57
2811 6268 5.541868 TCAGGGCCAAAACTGAATTAAATCA 59.458 36.000 6.18 0.00 40.51 2.57
2812 6269 6.036577 TCAGGGCCAAAACTGAATTAAATC 57.963 37.500 6.18 0.00 40.51 2.17
2813 6270 6.432403 TTCAGGGCCAAAACTGAATTAAAT 57.568 33.333 15.70 0.00 45.76 1.40
2814 6271 5.878406 TTCAGGGCCAAAACTGAATTAAA 57.122 34.783 15.70 0.00 45.76 1.52
2820 6277 3.763360 CACATATTCAGGGCCAAAACTGA 59.237 43.478 6.18 5.01 41.63 3.41
2821 6278 3.511146 ACACATATTCAGGGCCAAAACTG 59.489 43.478 6.18 2.09 36.07 3.16
2822 6279 3.511146 CACACATATTCAGGGCCAAAACT 59.489 43.478 6.18 0.00 0.00 2.66
2823 6280 3.258123 ACACACATATTCAGGGCCAAAAC 59.742 43.478 6.18 0.00 0.00 2.43
2824 6281 3.505386 ACACACATATTCAGGGCCAAAA 58.495 40.909 6.18 0.00 0.00 2.44
2825 6282 3.168035 ACACACATATTCAGGGCCAAA 57.832 42.857 6.18 0.00 0.00 3.28
2826 6283 2.897271 ACACACATATTCAGGGCCAA 57.103 45.000 6.18 0.00 0.00 4.52
2827 6284 2.040947 TGAACACACATATTCAGGGCCA 59.959 45.455 6.18 0.00 31.29 5.36
2828 6285 2.684881 CTGAACACACATATTCAGGGCC 59.315 50.000 0.00 0.00 45.35 5.80
2833 6290 9.554395 TTAGAGAAAACTGAACACACATATTCA 57.446 29.630 0.00 0.00 33.82 2.57
2836 6293 9.950496 AGATTAGAGAAAACTGAACACACATAT 57.050 29.630 0.00 0.00 0.00 1.78
2837 6294 9.424319 GAGATTAGAGAAAACTGAACACACATA 57.576 33.333 0.00 0.00 0.00 2.29
2838 6295 8.153550 AGAGATTAGAGAAAACTGAACACACAT 58.846 33.333 0.00 0.00 0.00 3.21
2839 6296 7.500992 AGAGATTAGAGAAAACTGAACACACA 58.499 34.615 0.00 0.00 0.00 3.72
2840 6297 7.954788 AGAGATTAGAGAAAACTGAACACAC 57.045 36.000 0.00 0.00 0.00 3.82
2841 6298 7.815068 GCTAGAGATTAGAGAAAACTGAACACA 59.185 37.037 0.00 0.00 0.00 3.72
2842 6299 8.032451 AGCTAGAGATTAGAGAAAACTGAACAC 58.968 37.037 0.00 0.00 0.00 3.32
2843 6300 8.128322 AGCTAGAGATTAGAGAAAACTGAACA 57.872 34.615 0.00 0.00 0.00 3.18
2844 6301 8.996024 AAGCTAGAGATTAGAGAAAACTGAAC 57.004 34.615 0.00 0.00 0.00 3.18
2852 6309 9.256228 TGACCTAAAAAGCTAGAGATTAGAGAA 57.744 33.333 0.00 0.00 0.00 2.87
2853 6310 8.824756 TGACCTAAAAAGCTAGAGATTAGAGA 57.175 34.615 0.00 0.00 0.00 3.10
2854 6311 9.474920 CATGACCTAAAAAGCTAGAGATTAGAG 57.525 37.037 0.00 0.00 0.00 2.43
2855 6312 7.928706 GCATGACCTAAAAAGCTAGAGATTAGA 59.071 37.037 0.00 0.00 0.00 2.10
2856 6313 7.712639 TGCATGACCTAAAAAGCTAGAGATTAG 59.287 37.037 0.00 0.00 0.00 1.73
2857 6314 7.564793 TGCATGACCTAAAAAGCTAGAGATTA 58.435 34.615 0.00 0.00 0.00 1.75
2858 6315 6.418101 TGCATGACCTAAAAAGCTAGAGATT 58.582 36.000 0.00 0.00 0.00 2.40
2859 6316 5.994250 TGCATGACCTAAAAAGCTAGAGAT 58.006 37.500 0.00 0.00 0.00 2.75
2860 6317 5.420725 TGCATGACCTAAAAAGCTAGAGA 57.579 39.130 0.00 0.00 0.00 3.10
2861 6318 6.690194 ATTGCATGACCTAAAAAGCTAGAG 57.310 37.500 0.00 0.00 0.00 2.43
2862 6319 6.658816 TCAATTGCATGACCTAAAAAGCTAGA 59.341 34.615 0.00 0.00 0.00 2.43
2863 6320 6.855836 TCAATTGCATGACCTAAAAAGCTAG 58.144 36.000 0.00 0.00 0.00 3.42
2864 6321 6.832520 TCAATTGCATGACCTAAAAAGCTA 57.167 33.333 0.00 0.00 0.00 3.32
2865 6322 5.726980 TCAATTGCATGACCTAAAAAGCT 57.273 34.783 0.00 0.00 0.00 3.74
2866 6323 6.973229 AATCAATTGCATGACCTAAAAAGC 57.027 33.333 0.00 0.00 30.82 3.51
2872 6329 9.639563 TCCTTAATTAATCAATTGCATGACCTA 57.360 29.630 0.00 0.00 35.88 3.08
2873 6330 8.537728 TCCTTAATTAATCAATTGCATGACCT 57.462 30.769 0.00 0.00 35.88 3.85
2874 6331 9.598517 TTTCCTTAATTAATCAATTGCATGACC 57.401 29.630 0.00 0.00 35.88 4.02
2879 6336 9.995003 ACAGTTTTCCTTAATTAATCAATTGCA 57.005 25.926 0.00 0.00 35.88 4.08
2890 6347 9.912634 CATGTACAATGACAGTTTTCCTTAATT 57.087 29.630 0.00 0.00 31.51 1.40
2891 6348 9.077885 ACATGTACAATGACAGTTTTCCTTAAT 57.922 29.630 0.00 0.00 31.51 1.40
2892 6349 8.458573 ACATGTACAATGACAGTTTTCCTTAA 57.541 30.769 0.00 0.00 31.51 1.85
2893 6350 9.733556 ATACATGTACAATGACAGTTTTCCTTA 57.266 29.630 7.96 0.00 31.51 2.69
2894 6351 6.959639 ACATGTACAATGACAGTTTTCCTT 57.040 33.333 0.00 0.00 31.51 3.36
2895 6352 7.665559 ACATACATGTACAATGACAGTTTTCCT 59.334 33.333 7.96 0.00 39.68 3.36
2896 6353 7.816640 ACATACATGTACAATGACAGTTTTCC 58.183 34.615 7.96 0.00 39.68 3.13
2897 6354 9.677567 AAACATACATGTACAATGACAGTTTTC 57.322 29.630 7.96 0.00 40.80 2.29
2898 6355 9.677567 GAAACATACATGTACAATGACAGTTTT 57.322 29.630 7.96 0.64 40.80 2.43
2899 6356 8.845227 TGAAACATACATGTACAATGACAGTTT 58.155 29.630 7.96 12.24 40.80 2.66
2900 6357 8.389779 TGAAACATACATGTACAATGACAGTT 57.610 30.769 7.96 5.38 40.80 3.16
2901 6358 7.361201 GCTGAAACATACATGTACAATGACAGT 60.361 37.037 7.96 0.00 40.80 3.55
2902 6359 6.963242 GCTGAAACATACATGTACAATGACAG 59.037 38.462 7.96 15.02 40.80 3.51
2903 6360 6.429385 TGCTGAAACATACATGTACAATGACA 59.571 34.615 7.96 6.88 40.80 3.58
2904 6361 6.841119 TGCTGAAACATACATGTACAATGAC 58.159 36.000 7.96 3.03 40.80 3.06
2905 6362 7.174772 AGTTGCTGAAACATACATGTACAATGA 59.825 33.333 7.96 0.00 40.80 2.57
2906 6363 7.307694 AGTTGCTGAAACATACATGTACAATG 58.692 34.615 7.96 6.63 40.80 2.82
2907 6364 7.452880 AGTTGCTGAAACATACATGTACAAT 57.547 32.000 7.96 0.00 40.80 2.71
2908 6365 6.875948 AGTTGCTGAAACATACATGTACAA 57.124 33.333 7.96 2.55 40.80 2.41
2909 6366 6.092122 GCTAGTTGCTGAAACATACATGTACA 59.908 38.462 7.96 0.00 41.61 2.90
2910 6367 6.478588 GCTAGTTGCTGAAACATACATGTAC 58.521 40.000 7.96 0.00 41.61 2.90
2911 6368 6.662414 GCTAGTTGCTGAAACATACATGTA 57.338 37.500 8.27 8.27 41.61 2.29
2912 6369 5.551760 GCTAGTTGCTGAAACATACATGT 57.448 39.130 2.69 2.69 41.61 3.21
2926 6383 3.372206 CACACCAATCACTAGCTAGTTGC 59.628 47.826 23.94 0.00 43.29 4.17
2927 6384 4.569943 ACACACCAATCACTAGCTAGTTG 58.430 43.478 23.94 19.37 33.46 3.16
2928 6385 4.891992 ACACACCAATCACTAGCTAGTT 57.108 40.909 23.94 8.01 33.46 2.24
2929 6386 4.891992 AACACACCAATCACTAGCTAGT 57.108 40.909 20.95 20.95 36.90 2.57
2930 6387 6.631016 TCTAAACACACCAATCACTAGCTAG 58.369 40.000 19.44 19.44 0.00 3.42
2931 6388 6.599356 TCTAAACACACCAATCACTAGCTA 57.401 37.500 0.00 0.00 0.00 3.32
2932 6389 5.483685 TCTAAACACACCAATCACTAGCT 57.516 39.130 0.00 0.00 0.00 3.32
2933 6390 6.183360 GGATTCTAAACACACCAATCACTAGC 60.183 42.308 0.00 0.00 0.00 3.42
2934 6391 7.106239 AGGATTCTAAACACACCAATCACTAG 58.894 38.462 0.00 0.00 0.00 2.57
2935 6392 7.016153 AGGATTCTAAACACACCAATCACTA 57.984 36.000 0.00 0.00 0.00 2.74
2936 6393 5.880901 AGGATTCTAAACACACCAATCACT 58.119 37.500 0.00 0.00 0.00 3.41
2937 6394 5.940470 AGAGGATTCTAAACACACCAATCAC 59.060 40.000 0.00 0.00 0.00 3.06
2938 6395 6.013379 AGAGAGGATTCTAAACACACCAATCA 60.013 38.462 0.00 0.00 32.53 2.57
2939 6396 6.314896 CAGAGAGGATTCTAAACACACCAATC 59.685 42.308 0.00 0.00 32.53 2.67
2940 6397 6.176183 CAGAGAGGATTCTAAACACACCAAT 58.824 40.000 0.00 0.00 32.53 3.16
2941 6398 5.551233 CAGAGAGGATTCTAAACACACCAA 58.449 41.667 0.00 0.00 32.53 3.67
2942 6399 4.563580 GCAGAGAGGATTCTAAACACACCA 60.564 45.833 0.00 0.00 32.53 4.17
2943 6400 3.935828 GCAGAGAGGATTCTAAACACACC 59.064 47.826 0.00 0.00 32.53 4.16
2944 6401 4.569943 TGCAGAGAGGATTCTAAACACAC 58.430 43.478 0.00 0.00 32.53 3.82
2945 6402 4.890158 TGCAGAGAGGATTCTAAACACA 57.110 40.909 0.00 0.00 32.53 3.72
2946 6403 5.181748 ACATGCAGAGAGGATTCTAAACAC 58.818 41.667 0.00 0.00 32.53 3.32
2947 6404 5.426689 ACATGCAGAGAGGATTCTAAACA 57.573 39.130 0.00 0.00 32.53 2.83
2948 6405 6.597280 AGAAACATGCAGAGAGGATTCTAAAC 59.403 38.462 0.00 0.00 32.53 2.01
2949 6406 6.596888 CAGAAACATGCAGAGAGGATTCTAAA 59.403 38.462 0.00 0.00 32.53 1.85
2950 6407 6.111382 CAGAAACATGCAGAGAGGATTCTAA 58.889 40.000 0.00 0.00 32.53 2.10
2951 6408 5.396101 CCAGAAACATGCAGAGAGGATTCTA 60.396 44.000 0.00 0.00 32.53 2.10
2952 6409 4.515361 CAGAAACATGCAGAGAGGATTCT 58.485 43.478 0.00 0.00 36.01 2.40
2953 6410 3.626670 CCAGAAACATGCAGAGAGGATTC 59.373 47.826 0.00 0.00 0.00 2.52
2954 6411 3.009916 ACCAGAAACATGCAGAGAGGATT 59.990 43.478 0.00 0.00 0.00 3.01
2955 6412 2.575279 ACCAGAAACATGCAGAGAGGAT 59.425 45.455 0.00 0.00 0.00 3.24
2956 6413 1.980765 ACCAGAAACATGCAGAGAGGA 59.019 47.619 0.00 0.00 0.00 3.71
2957 6414 2.486472 ACCAGAAACATGCAGAGAGG 57.514 50.000 0.00 0.00 0.00 3.69
2958 6415 3.405831 TGAACCAGAAACATGCAGAGAG 58.594 45.455 0.00 0.00 0.00 3.20
2959 6416 3.181451 ACTGAACCAGAAACATGCAGAGA 60.181 43.478 0.45 0.00 35.18 3.10
2960 6417 3.144506 ACTGAACCAGAAACATGCAGAG 58.855 45.455 0.45 0.00 35.18 3.35
2961 6418 3.213206 ACTGAACCAGAAACATGCAGA 57.787 42.857 0.45 0.00 35.18 4.26
2962 6419 6.317140 ACATATACTGAACCAGAAACATGCAG 59.683 38.462 0.45 0.00 35.18 4.41
2963 6420 6.179756 ACATATACTGAACCAGAAACATGCA 58.820 36.000 0.45 0.00 35.18 3.96
2964 6421 6.683974 ACATATACTGAACCAGAAACATGC 57.316 37.500 0.45 0.00 35.18 4.06
3196 6653 5.331876 AGAGGCTAGAACACATAGTTGAC 57.668 43.478 0.00 0.00 41.51 3.18
3197 6654 6.360370 AAAGAGGCTAGAACACATAGTTGA 57.640 37.500 0.00 0.00 41.51 3.18
3198 6655 7.440523 AAAAAGAGGCTAGAACACATAGTTG 57.559 36.000 0.00 0.00 41.51 3.16
3233 6690 8.570488 TCACGAAACATCTTCTAGTTTGTACTA 58.430 33.333 0.00 0.00 38.01 1.82
3234 6691 7.431249 TCACGAAACATCTTCTAGTTTGTACT 58.569 34.615 0.00 0.00 38.01 2.73
3235 6692 7.633361 TCACGAAACATCTTCTAGTTTGTAC 57.367 36.000 0.00 0.00 38.01 2.90
3236 6693 8.827177 AATCACGAAACATCTTCTAGTTTGTA 57.173 30.769 0.00 0.00 38.01 2.41
3237 6694 7.441157 TGAATCACGAAACATCTTCTAGTTTGT 59.559 33.333 0.00 0.00 38.01 2.83
3238 6695 7.796838 TGAATCACGAAACATCTTCTAGTTTG 58.203 34.615 0.00 0.00 38.01 2.93
3239 6696 7.962964 TGAATCACGAAACATCTTCTAGTTT 57.037 32.000 0.00 0.00 40.38 2.66
3240 6697 7.118390 CCTTGAATCACGAAACATCTTCTAGTT 59.882 37.037 0.00 0.00 0.00 2.24
3241 6698 6.591834 CCTTGAATCACGAAACATCTTCTAGT 59.408 38.462 0.00 0.00 0.00 2.57
3242 6699 6.591834 ACCTTGAATCACGAAACATCTTCTAG 59.408 38.462 0.00 0.00 0.00 2.43
3243 6700 6.464222 ACCTTGAATCACGAAACATCTTCTA 58.536 36.000 0.00 0.00 0.00 2.10
3244 6701 5.308825 ACCTTGAATCACGAAACATCTTCT 58.691 37.500 0.00 0.00 0.00 2.85
3245 6702 5.613358 ACCTTGAATCACGAAACATCTTC 57.387 39.130 0.00 0.00 0.00 2.87
3246 6703 4.152402 CGACCTTGAATCACGAAACATCTT 59.848 41.667 0.00 0.00 0.00 2.40
3247 6704 3.679980 CGACCTTGAATCACGAAACATCT 59.320 43.478 0.00 0.00 0.00 2.90
3248 6705 3.678072 TCGACCTTGAATCACGAAACATC 59.322 43.478 0.00 0.00 0.00 3.06
3249 6706 3.659786 TCGACCTTGAATCACGAAACAT 58.340 40.909 0.00 0.00 0.00 2.71
3250 6707 3.057019 CTCGACCTTGAATCACGAAACA 58.943 45.455 0.00 0.00 32.85 2.83
3251 6708 2.412089 CCTCGACCTTGAATCACGAAAC 59.588 50.000 0.00 0.00 32.85 2.78
3252 6709 2.297880 TCCTCGACCTTGAATCACGAAA 59.702 45.455 0.00 0.00 32.85 3.46
3253 6710 1.890489 TCCTCGACCTTGAATCACGAA 59.110 47.619 0.00 0.00 32.85 3.85
3254 6711 1.541379 TCCTCGACCTTGAATCACGA 58.459 50.000 0.00 0.00 0.00 4.35
3255 6712 2.159240 TCATCCTCGACCTTGAATCACG 60.159 50.000 0.00 0.00 0.00 4.35
3256 6713 3.190874 GTCATCCTCGACCTTGAATCAC 58.809 50.000 0.00 0.00 0.00 3.06
3257 6714 2.831526 TGTCATCCTCGACCTTGAATCA 59.168 45.455 0.00 0.00 34.88 2.57
3258 6715 3.526931 TGTCATCCTCGACCTTGAATC 57.473 47.619 0.00 0.00 34.88 2.52
3259 6716 3.981071 TTGTCATCCTCGACCTTGAAT 57.019 42.857 0.00 0.00 34.88 2.57
3260 6717 3.181459 TGTTTGTCATCCTCGACCTTGAA 60.181 43.478 0.00 0.00 34.88 2.69
3261 6718 2.367241 TGTTTGTCATCCTCGACCTTGA 59.633 45.455 0.00 0.00 34.88 3.02
3262 6719 2.766313 TGTTTGTCATCCTCGACCTTG 58.234 47.619 0.00 0.00 34.88 3.61
3263 6720 3.703001 ATGTTTGTCATCCTCGACCTT 57.297 42.857 0.00 0.00 34.88 3.50
3264 6721 3.703001 AATGTTTGTCATCCTCGACCT 57.297 42.857 0.00 0.00 35.48 3.85
3265 6722 6.706270 ACATATAATGTTTGTCATCCTCGACC 59.294 38.462 0.00 0.00 41.63 4.79
3266 6723 7.715265 ACATATAATGTTTGTCATCCTCGAC 57.285 36.000 0.00 0.00 41.63 4.20
3267 6724 8.638873 ACTACATATAATGTTTGTCATCCTCGA 58.361 33.333 0.00 0.00 41.63 4.04
3268 6725 8.703336 CACTACATATAATGTTTGTCATCCTCG 58.297 37.037 0.00 0.00 41.63 4.63
3269 6726 9.764363 TCACTACATATAATGTTTGTCATCCTC 57.236 33.333 0.00 0.00 41.63 3.71
3302 6759 4.669206 TGAATGGCAGAGCAAAGAAAAA 57.331 36.364 0.00 0.00 0.00 1.94
3303 6760 4.669206 TTGAATGGCAGAGCAAAGAAAA 57.331 36.364 0.00 0.00 0.00 2.29
3304 6761 4.877378 ATTGAATGGCAGAGCAAAGAAA 57.123 36.364 0.00 0.00 0.00 2.52
3305 6762 4.142622 CGTATTGAATGGCAGAGCAAAGAA 60.143 41.667 0.00 0.00 0.00 2.52
3306 6763 3.374988 CGTATTGAATGGCAGAGCAAAGA 59.625 43.478 0.00 0.00 0.00 2.52
3307 6764 3.374988 TCGTATTGAATGGCAGAGCAAAG 59.625 43.478 0.00 0.00 0.00 2.77
3308 6765 3.342719 TCGTATTGAATGGCAGAGCAAA 58.657 40.909 0.00 0.00 0.00 3.68
3309 6766 2.938451 CTCGTATTGAATGGCAGAGCAA 59.062 45.455 0.00 0.00 0.00 3.91
3310 6767 2.554142 CTCGTATTGAATGGCAGAGCA 58.446 47.619 0.00 0.00 0.00 4.26
3311 6768 1.262683 GCTCGTATTGAATGGCAGAGC 59.737 52.381 5.52 5.52 41.92 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.