Multiple sequence alignment - TraesCS1D01G294100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G294100 chr1D 100.000 2474 0 0 1 2474 392969341 392966868 0.000000e+00 4569.0
1 TraesCS1D01G294100 chr1D 95.052 768 28 2 1 758 477512067 477511300 0.000000e+00 1199.0
2 TraesCS1D01G294100 chr1D 97.912 479 10 0 941 1419 393034678 393034200 0.000000e+00 830.0
3 TraesCS1D01G294100 chr1D 97.812 457 8 1 963 1419 477509492 477509038 0.000000e+00 787.0
4 TraesCS1D01G294100 chr1D 96.364 440 13 1 35 474 393035721 393035285 0.000000e+00 721.0
5 TraesCS1D01G294100 chr1D 94.118 391 21 2 1014 1403 478031474 478031863 5.890000e-166 593.0
6 TraesCS1D01G294100 chr1D 95.765 307 10 3 1472 1778 4274244 4273941 2.210000e-135 492.0
7 TraesCS1D01G294100 chr1D 96.310 271 10 0 488 758 393034941 393034671 1.750000e-121 446.0
8 TraesCS1D01G294100 chr1D 96.316 190 6 1 760 949 30372851 30373039 6.640000e-81 311.0
9 TraesCS1D01G294100 chr1D 96.571 175 6 0 760 934 474598797 474598971 8.660000e-75 291.0
10 TraesCS1D01G294100 chr1D 81.683 202 14 2 1226 1419 477598927 477598741 1.980000e-31 147.0
11 TraesCS1D01G294100 chr1D 96.078 51 2 0 1420 1470 4274339 4274289 1.580000e-12 84.2
12 TraesCS1D01G294100 chr5D 97.630 1055 22 1 1420 2474 459431785 459432836 0.000000e+00 1807.0
13 TraesCS1D01G294100 chr5D 97.477 436 10 1 1419 1853 459436646 459437081 0.000000e+00 743.0
14 TraesCS1D01G294100 chr5D 83.789 549 74 9 1 541 383742078 383742619 7.890000e-140 507.0
15 TraesCS1D01G294100 chr5D 96.591 176 6 0 760 935 27545281 27545106 2.410000e-75 292.0
16 TraesCS1D01G294100 chr3D 96.589 1026 34 1 1450 2474 25540797 25539772 0.000000e+00 1700.0
17 TraesCS1D01G294100 chr3D 95.455 88 3 1 1417 1503 25540883 25540796 3.320000e-29 139.0
18 TraesCS1D01G294100 chrUn 97.265 914 22 1 1420 2333 303974582 303975492 0.000000e+00 1546.0
19 TraesCS1D01G294100 chrUn 97.254 692 16 1 1619 2310 334888307 334887619 0.000000e+00 1170.0
20 TraesCS1D01G294100 chrUn 96.382 608 22 0 1867 2474 154580969 154580362 0.000000e+00 1002.0
21 TraesCS1D01G294100 chrUn 96.948 426 12 1 1419 1844 154576551 154576127 0.000000e+00 713.0
22 TraesCS1D01G294100 chrUn 97.361 341 9 0 1421 1761 154581347 154581007 4.590000e-162 580.0
23 TraesCS1D01G294100 chr1A 88.773 766 53 9 1 758 573950061 573949321 0.000000e+00 907.0
24 TraesCS1D01G294100 chr1A 95.218 481 19 3 941 1419 573949328 573948850 0.000000e+00 758.0
25 TraesCS1D01G294100 chr1A 93.350 391 24 2 1014 1403 574301746 574302135 5.930000e-161 577.0
26 TraesCS1D01G294100 chr1A 92.288 389 28 2 1014 1401 31245146 31244759 3.600000e-153 551.0
27 TraesCS1D01G294100 chr1A 90.714 420 22 5 1001 1419 574214957 574214554 6.020000e-151 544.0
28 TraesCS1D01G294100 chr1A 78.541 466 91 7 1915 2376 579213759 579214219 5.170000e-77 298.0
29 TraesCS1D01G294100 chr1B 92.381 420 30 2 1001 1419 665113960 665113542 4.550000e-167 597.0
30 TraesCS1D01G294100 chr1B 90.977 399 34 2 1014 1411 665270979 665271376 1.010000e-148 536.0
31 TraesCS1D01G294100 chr1B 82.709 561 70 17 1 541 594063706 594063153 8.010000e-130 473.0
32 TraesCS1D01G294100 chr1B 84.387 269 23 9 1420 1687 6541799 6542049 1.900000e-61 246.0
33 TraesCS1D01G294100 chr6B 85.089 503 60 12 1 494 717912023 717911527 1.320000e-137 499.0
34 TraesCS1D01G294100 chr6B 100.000 28 0 0 1838 1865 698074235 698074262 4.000000e-03 52.8
35 TraesCS1D01G294100 chr7D 84.615 507 59 12 4 499 159709676 159709178 1.030000e-133 486.0
36 TraesCS1D01G294100 chr7D 98.295 176 3 0 760 935 141296207 141296032 2.390000e-80 309.0
37 TraesCS1D01G294100 chr7D 97.175 177 5 0 760 936 41570081 41570257 1.440000e-77 300.0
38 TraesCS1D01G294100 chr7D 97.159 176 5 0 760 935 90043228 90043053 5.170000e-77 298.0
39 TraesCS1D01G294100 chr7D 94.595 185 9 1 760 944 551746335 551746152 4.030000e-73 285.0
40 TraesCS1D01G294100 chr7D 89.691 194 14 2 1656 1843 1253853 1254046 2.460000e-60 243.0
41 TraesCS1D01G294100 chr5A 84.000 500 67 8 2 494 600953696 600953203 3.730000e-128 468.0
42 TraesCS1D01G294100 chr3B 82.018 545 76 17 4 538 206427551 206427019 6.280000e-121 444.0
43 TraesCS1D01G294100 chr3B 96.591 176 6 0 760 935 707054768 707054593 2.410000e-75 292.0
44 TraesCS1D01G294100 chr6D 79.310 638 109 17 1843 2474 423440724 423440104 2.270000e-115 425.0
45 TraesCS1D01G294100 chr6A 80.443 542 100 4 1918 2459 18900760 18900225 2.290000e-110 409.0
46 TraesCS1D01G294100 chr6A 100.000 28 0 0 1838 1865 41479281 41479308 4.000000e-03 52.8
47 TraesCS1D01G294100 chr2D 79.140 628 100 22 1842 2459 60597171 60597777 2.960000e-109 405.0
48 TraesCS1D01G294100 chr3A 92.746 193 11 3 757 948 100351365 100351175 2.420000e-70 276.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G294100 chr1D 392966868 392969341 2473 True 4569.000000 4569 100.0000 1 2474 1 chr1D.!!$R1 2473
1 TraesCS1D01G294100 chr1D 477509038 477512067 3029 True 993.000000 1199 96.4320 1 1419 2 chr1D.!!$R5 1418
2 TraesCS1D01G294100 chr1D 393034200 393035721 1521 True 665.666667 830 96.8620 35 1419 3 chr1D.!!$R4 1384
3 TraesCS1D01G294100 chr5D 459431785 459437081 5296 False 1275.000000 1807 97.5535 1419 2474 2 chr5D.!!$F2 1055
4 TraesCS1D01G294100 chr5D 383742078 383742619 541 False 507.000000 507 83.7890 1 541 1 chr5D.!!$F1 540
5 TraesCS1D01G294100 chr3D 25539772 25540883 1111 True 919.500000 1700 96.0220 1417 2474 2 chr3D.!!$R1 1057
6 TraesCS1D01G294100 chrUn 303974582 303975492 910 False 1546.000000 1546 97.2650 1420 2333 1 chrUn.!!$F1 913
7 TraesCS1D01G294100 chrUn 334887619 334888307 688 True 1170.000000 1170 97.2540 1619 2310 1 chrUn.!!$R1 691
8 TraesCS1D01G294100 chrUn 154576127 154581347 5220 True 765.000000 1002 96.8970 1419 2474 3 chrUn.!!$R2 1055
9 TraesCS1D01G294100 chr1A 573948850 573950061 1211 True 832.500000 907 91.9955 1 1419 2 chr1A.!!$R3 1418
10 TraesCS1D01G294100 chr1B 594063153 594063706 553 True 473.000000 473 82.7090 1 541 1 chr1B.!!$R1 540
11 TraesCS1D01G294100 chr3B 206427019 206427551 532 True 444.000000 444 82.0180 4 538 1 chr3B.!!$R1 534
12 TraesCS1D01G294100 chr6D 423440104 423440724 620 True 425.000000 425 79.3100 1843 2474 1 chr6D.!!$R1 631
13 TraesCS1D01G294100 chr6A 18900225 18900760 535 True 409.000000 409 80.4430 1918 2459 1 chr6A.!!$R1 541
14 TraesCS1D01G294100 chr2D 60597171 60597777 606 False 405.000000 405 79.1400 1842 2459 1 chr2D.!!$F1 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
853 1204 0.317103 AGCGTGCTATTAGCGAGACG 60.317 55.0 17.79 17.79 46.26 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2268 4471 0.313043 CACGTCTCCTGTACGGTGTT 59.687 55.0 0.0 0.0 44.48 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.217231 CGAAGGTAGCCCCACGAT 58.783 61.111 0.00 0.00 37.42 3.73
177 178 2.281484 GAGTGGAAAGTGGCGGCA 60.281 61.111 7.97 7.97 0.00 5.69
452 466 2.178912 GGTCAGTCCGGTCATTTGAA 57.821 50.000 0.00 0.00 0.00 2.69
515 866 2.825982 CCCGCCCGGATGTATGAA 59.174 61.111 0.73 0.00 37.50 2.57
570 921 2.802719 AGTTGCCGATAATTTGGGTGT 58.197 42.857 0.00 0.00 0.00 4.16
579 930 4.027132 CGATAATTTGGGTGTCGTTCGTAG 60.027 45.833 0.00 0.00 0.00 3.51
601 952 4.056050 GTTTTTGAGCTAGTCCGAGTTCA 58.944 43.478 0.00 0.00 35.18 3.18
612 963 2.037381 GTCCGAGTTCAGAAAGGAAGGT 59.963 50.000 5.18 0.00 32.20 3.50
616 967 1.494721 AGTTCAGAAAGGAAGGTGGCA 59.505 47.619 0.00 0.00 0.00 4.92
750 1101 1.520666 GGACCGGTGGACATACAGG 59.479 63.158 14.63 0.00 41.04 4.00
751 1102 1.153429 GACCGGTGGACATACAGGC 60.153 63.158 14.63 0.00 39.19 4.85
752 1103 1.612442 ACCGGTGGACATACAGGCT 60.612 57.895 6.12 0.00 39.19 4.58
753 1104 1.198759 ACCGGTGGACATACAGGCTT 61.199 55.000 6.12 0.00 39.19 4.35
754 1105 0.744414 CCGGTGGACATACAGGCTTG 60.744 60.000 0.00 0.00 0.00 4.01
755 1106 1.369091 CGGTGGACATACAGGCTTGC 61.369 60.000 0.00 0.00 0.00 4.01
756 1107 0.322456 GGTGGACATACAGGCTTGCA 60.322 55.000 0.00 0.00 0.00 4.08
757 1108 1.533625 GTGGACATACAGGCTTGCAA 58.466 50.000 0.00 0.00 0.00 4.08
758 1109 1.470098 GTGGACATACAGGCTTGCAAG 59.530 52.381 22.44 22.44 0.00 4.01
759 1110 1.350684 TGGACATACAGGCTTGCAAGA 59.649 47.619 30.39 9.05 0.00 3.02
760 1111 2.224744 TGGACATACAGGCTTGCAAGAA 60.225 45.455 30.39 9.25 0.00 2.52
761 1112 3.019564 GGACATACAGGCTTGCAAGAAT 58.980 45.455 30.39 14.11 0.00 2.40
762 1113 3.181493 GGACATACAGGCTTGCAAGAATG 60.181 47.826 30.39 25.80 0.00 2.67
763 1114 3.689347 ACATACAGGCTTGCAAGAATGA 58.311 40.909 30.39 15.51 0.00 2.57
764 1115 4.081406 ACATACAGGCTTGCAAGAATGAA 58.919 39.130 30.39 11.75 0.00 2.57
765 1116 4.523943 ACATACAGGCTTGCAAGAATGAAA 59.476 37.500 30.39 18.24 0.00 2.69
766 1117 5.010922 ACATACAGGCTTGCAAGAATGAAAA 59.989 36.000 30.39 16.17 0.00 2.29
767 1118 4.405116 ACAGGCTTGCAAGAATGAAAAA 57.595 36.364 30.39 0.00 0.00 1.94
790 1141 8.447787 AAAAATAGCGTGCTACAACAAAATAG 57.552 30.769 3.26 0.00 0.00 1.73
791 1142 3.471495 AGCGTGCTACAACAAAATAGC 57.529 42.857 0.00 0.00 43.46 2.97
792 1143 2.159707 AGCGTGCTACAACAAAATAGCG 60.160 45.455 0.00 0.00 45.65 4.26
793 1144 2.412325 GCGTGCTACAACAAAATAGCGT 60.412 45.455 0.00 0.00 45.65 5.07
794 1145 3.404564 CGTGCTACAACAAAATAGCGTC 58.595 45.455 0.00 0.00 45.65 5.19
795 1146 3.404564 GTGCTACAACAAAATAGCGTCG 58.595 45.455 0.00 0.00 45.65 5.12
796 1147 3.122278 GTGCTACAACAAAATAGCGTCGA 59.878 43.478 0.00 0.00 45.65 4.20
797 1148 3.122278 TGCTACAACAAAATAGCGTCGAC 59.878 43.478 5.18 5.18 45.65 4.20
798 1149 3.483085 GCTACAACAAAATAGCGTCGACC 60.483 47.826 10.58 2.76 34.87 4.79
799 1150 2.762745 ACAACAAAATAGCGTCGACCT 58.237 42.857 10.58 10.66 0.00 3.85
800 1151 2.735134 ACAACAAAATAGCGTCGACCTC 59.265 45.455 10.58 1.88 0.00 3.85
801 1152 2.734606 CAACAAAATAGCGTCGACCTCA 59.265 45.455 10.58 0.00 0.00 3.86
802 1153 3.034721 ACAAAATAGCGTCGACCTCAA 57.965 42.857 10.58 0.00 0.00 3.02
803 1154 3.395639 ACAAAATAGCGTCGACCTCAAA 58.604 40.909 10.58 0.00 0.00 2.69
804 1155 3.810941 ACAAAATAGCGTCGACCTCAAAA 59.189 39.130 10.58 0.00 0.00 2.44
805 1156 4.454504 ACAAAATAGCGTCGACCTCAAAAT 59.545 37.500 10.58 0.00 0.00 1.82
806 1157 5.640357 ACAAAATAGCGTCGACCTCAAAATA 59.360 36.000 10.58 0.00 0.00 1.40
807 1158 6.315393 ACAAAATAGCGTCGACCTCAAAATAT 59.685 34.615 10.58 0.00 0.00 1.28
808 1159 5.907197 AATAGCGTCGACCTCAAAATATG 57.093 39.130 10.58 0.00 0.00 1.78
809 1160 1.933853 AGCGTCGACCTCAAAATATGC 59.066 47.619 10.58 3.23 0.00 3.14
810 1161 1.933853 GCGTCGACCTCAAAATATGCT 59.066 47.619 10.58 0.00 0.00 3.79
811 1162 2.285834 GCGTCGACCTCAAAATATGCTG 60.286 50.000 10.58 0.00 0.00 4.41
812 1163 2.930040 CGTCGACCTCAAAATATGCTGT 59.070 45.455 10.58 0.00 0.00 4.40
813 1164 3.370978 CGTCGACCTCAAAATATGCTGTT 59.629 43.478 10.58 0.00 0.00 3.16
814 1165 4.565166 CGTCGACCTCAAAATATGCTGTTA 59.435 41.667 10.58 0.00 0.00 2.41
815 1166 5.276395 CGTCGACCTCAAAATATGCTGTTAG 60.276 44.000 10.58 0.00 0.00 2.34
816 1167 4.570772 TCGACCTCAAAATATGCTGTTAGC 59.429 41.667 0.00 0.00 42.82 3.09
817 1168 4.550831 CGACCTCAAAATATGCTGTTAGCG 60.551 45.833 0.00 0.00 46.26 4.26
818 1169 4.261801 ACCTCAAAATATGCTGTTAGCGT 58.738 39.130 0.83 0.83 46.26 5.07
819 1170 4.094887 ACCTCAAAATATGCTGTTAGCGTG 59.905 41.667 5.82 0.00 46.26 5.34
820 1171 4.014847 TCAAAATATGCTGTTAGCGTGC 57.985 40.909 5.82 0.00 46.26 5.34
821 1172 3.689161 TCAAAATATGCTGTTAGCGTGCT 59.311 39.130 5.82 0.00 46.26 4.40
822 1173 4.873259 TCAAAATATGCTGTTAGCGTGCTA 59.127 37.500 5.82 0.00 46.26 3.49
823 1174 5.527214 TCAAAATATGCTGTTAGCGTGCTAT 59.473 36.000 1.86 0.00 46.26 2.97
824 1175 6.704050 TCAAAATATGCTGTTAGCGTGCTATA 59.296 34.615 1.86 0.00 46.26 1.31
825 1176 7.387673 TCAAAATATGCTGTTAGCGTGCTATAT 59.612 33.333 1.86 0.00 46.26 0.86
826 1177 6.893958 AATATGCTGTTAGCGTGCTATATC 57.106 37.500 1.86 0.00 46.26 1.63
827 1178 2.661594 TGCTGTTAGCGTGCTATATCG 58.338 47.619 1.86 0.00 46.26 2.92
828 1179 3.173931 TGCTGTTAGCGTGCTATATCGC 61.174 50.000 1.86 1.28 46.26 4.58
849 1200 3.132629 GCTATAGCGTGCTATTAGCGA 57.867 47.619 18.62 0.92 46.26 4.93
850 1201 3.102276 GCTATAGCGTGCTATTAGCGAG 58.898 50.000 18.62 11.00 46.26 5.03
851 1202 3.181509 GCTATAGCGTGCTATTAGCGAGA 60.182 47.826 18.62 0.00 46.26 4.04
852 1203 2.682952 TAGCGTGCTATTAGCGAGAC 57.317 50.000 10.94 3.28 46.26 3.36
853 1204 0.317103 AGCGTGCTATTAGCGAGACG 60.317 55.000 17.79 17.79 46.26 4.18
854 1205 0.591741 GCGTGCTATTAGCGAGACGT 60.592 55.000 21.02 0.00 46.26 4.34
855 1206 1.823828 CGTGCTATTAGCGAGACGTT 58.176 50.000 15.20 0.00 46.26 3.99
856 1207 1.513178 CGTGCTATTAGCGAGACGTTG 59.487 52.381 15.20 0.00 46.26 4.10
857 1208 2.527100 GTGCTATTAGCGAGACGTTGT 58.473 47.619 10.94 0.00 46.26 3.32
858 1209 3.688272 GTGCTATTAGCGAGACGTTGTA 58.312 45.455 10.94 0.00 46.26 2.41
859 1210 3.481388 GTGCTATTAGCGAGACGTTGTAC 59.519 47.826 10.94 0.00 46.26 2.90
860 1211 3.127376 TGCTATTAGCGAGACGTTGTACA 59.873 43.478 10.94 0.00 46.26 2.90
861 1212 3.481388 GCTATTAGCGAGACGTTGTACAC 59.519 47.826 0.00 0.00 0.00 2.90
862 1213 3.844577 ATTAGCGAGACGTTGTACACT 57.155 42.857 0.00 0.00 0.00 3.55
863 1214 2.606717 TAGCGAGACGTTGTACACTG 57.393 50.000 0.00 0.00 0.00 3.66
864 1215 0.949397 AGCGAGACGTTGTACACTGA 59.051 50.000 0.00 0.00 0.00 3.41
865 1216 1.540267 AGCGAGACGTTGTACACTGAT 59.460 47.619 0.00 0.00 0.00 2.90
866 1217 2.745821 AGCGAGACGTTGTACACTGATA 59.254 45.455 0.00 0.00 0.00 2.15
867 1218 3.377485 AGCGAGACGTTGTACACTGATAT 59.623 43.478 0.00 0.00 0.00 1.63
868 1219 4.573607 AGCGAGACGTTGTACACTGATATA 59.426 41.667 0.00 0.00 0.00 0.86
869 1220 5.238868 AGCGAGACGTTGTACACTGATATAT 59.761 40.000 0.00 0.00 0.00 0.86
870 1221 5.913514 GCGAGACGTTGTACACTGATATATT 59.086 40.000 0.00 0.00 0.00 1.28
871 1222 6.417044 GCGAGACGTTGTACACTGATATATTT 59.583 38.462 0.00 0.00 0.00 1.40
872 1223 7.588854 GCGAGACGTTGTACACTGATATATTTA 59.411 37.037 0.00 0.00 0.00 1.40
873 1224 9.104126 CGAGACGTTGTACACTGATATATTTAG 57.896 37.037 0.00 0.00 0.00 1.85
874 1225 8.798748 AGACGTTGTACACTGATATATTTAGC 57.201 34.615 0.00 0.00 0.00 3.09
875 1226 7.590322 AGACGTTGTACACTGATATATTTAGCG 59.410 37.037 0.00 0.00 0.00 4.26
876 1227 7.420002 ACGTTGTACACTGATATATTTAGCGA 58.580 34.615 0.00 0.00 0.00 4.93
877 1228 7.916977 ACGTTGTACACTGATATATTTAGCGAA 59.083 33.333 0.00 0.00 0.00 4.70
878 1229 8.748582 CGTTGTACACTGATATATTTAGCGAAA 58.251 33.333 0.00 0.00 0.00 3.46
879 1230 9.845305 GTTGTACACTGATATATTTAGCGAAAC 57.155 33.333 0.00 0.00 0.00 2.78
880 1231 9.589111 TTGTACACTGATATATTTAGCGAAACA 57.411 29.630 0.00 0.00 0.00 2.83
881 1232 9.589111 TGTACACTGATATATTTAGCGAAACAA 57.411 29.630 0.00 0.00 0.00 2.83
893 1244 7.969387 TTTAGCGAAACAATTCTCAATATGC 57.031 32.000 0.00 0.00 33.17 3.14
894 1245 5.824904 AGCGAAACAATTCTCAATATGCT 57.175 34.783 0.00 0.00 33.17 3.79
895 1246 6.925610 AGCGAAACAATTCTCAATATGCTA 57.074 33.333 0.00 0.00 33.17 3.49
896 1247 7.502120 AGCGAAACAATTCTCAATATGCTAT 57.498 32.000 0.00 0.00 33.17 2.97
897 1248 8.607441 AGCGAAACAATTCTCAATATGCTATA 57.393 30.769 0.00 0.00 33.17 1.31
898 1249 8.715998 AGCGAAACAATTCTCAATATGCTATAG 58.284 33.333 0.00 0.00 33.17 1.31
899 1250 7.479916 GCGAAACAATTCTCAATATGCTATAGC 59.520 37.037 18.18 18.18 36.05 2.97
900 1251 7.685712 CGAAACAATTCTCAATATGCTATAGCG 59.314 37.037 19.55 5.29 37.34 4.26
901 1252 7.969536 AACAATTCTCAATATGCTATAGCGT 57.030 32.000 22.53 22.53 45.83 5.07
902 1253 7.356641 ACAATTCTCAATATGCTATAGCGTG 57.643 36.000 26.43 17.43 45.83 5.34
903 1254 6.128445 ACAATTCTCAATATGCTATAGCGTGC 60.128 38.462 26.43 2.18 45.83 5.34
904 1255 4.790765 TCTCAATATGCTATAGCGTGCT 57.209 40.909 26.43 12.72 45.83 4.40
905 1256 5.897377 TCTCAATATGCTATAGCGTGCTA 57.103 39.130 26.43 9.76 45.83 3.49
906 1257 6.456795 TCTCAATATGCTATAGCGTGCTAT 57.543 37.500 26.43 17.65 45.83 2.97
907 1258 6.867550 TCTCAATATGCTATAGCGTGCTATT 58.132 36.000 26.43 16.34 45.83 1.73
908 1259 7.996385 TCTCAATATGCTATAGCGTGCTATTA 58.004 34.615 26.43 8.34 45.83 0.98
909 1260 8.131731 TCTCAATATGCTATAGCGTGCTATTAG 58.868 37.037 26.43 16.02 45.83 1.73
910 1261 6.697455 TCAATATGCTATAGCGTGCTATTAGC 59.303 38.462 26.43 21.07 45.83 3.09
911 1262 2.863739 TGCTATAGCGTGCTATTAGCG 58.136 47.619 18.62 7.48 44.30 4.26
912 1263 2.486592 TGCTATAGCGTGCTATTAGCGA 59.513 45.455 18.62 12.37 44.30 4.93
913 1264 3.102276 GCTATAGCGTGCTATTAGCGAG 58.898 50.000 18.62 11.00 46.26 5.03
914 1265 2.638556 ATAGCGTGCTATTAGCGAGG 57.361 50.000 8.54 7.17 46.26 4.63
915 1266 1.315690 TAGCGTGCTATTAGCGAGGT 58.684 50.000 10.94 13.70 46.26 3.85
916 1267 0.460311 AGCGTGCTATTAGCGAGGTT 59.540 50.000 10.94 2.30 46.26 3.50
917 1268 1.679680 AGCGTGCTATTAGCGAGGTTA 59.320 47.619 10.94 0.00 46.26 2.85
918 1269 2.296471 AGCGTGCTATTAGCGAGGTTAT 59.704 45.455 10.94 0.00 46.26 1.89
919 1270 3.504906 AGCGTGCTATTAGCGAGGTTATA 59.495 43.478 10.94 0.00 46.26 0.98
920 1271 3.852536 GCGTGCTATTAGCGAGGTTATAG 59.147 47.826 10.94 4.53 46.26 1.31
921 1272 3.852536 CGTGCTATTAGCGAGGTTATAGC 59.147 47.826 19.87 19.87 46.26 2.97
922 1273 3.852536 GTGCTATTAGCGAGGTTATAGCG 59.147 47.826 20.69 0.00 46.26 4.26
923 1274 3.504906 TGCTATTAGCGAGGTTATAGCGT 59.495 43.478 20.69 0.00 46.26 5.07
924 1275 3.852536 GCTATTAGCGAGGTTATAGCGTG 59.147 47.826 14.58 0.00 37.00 5.34
925 1276 2.129823 TTAGCGAGGTTATAGCGTGC 57.870 50.000 0.00 0.00 34.23 5.34
926 1277 1.315690 TAGCGAGGTTATAGCGTGCT 58.684 50.000 0.00 0.00 35.69 4.40
927 1278 1.315690 AGCGAGGTTATAGCGTGCTA 58.684 50.000 3.73 3.73 34.23 3.49
928 1279 1.887198 AGCGAGGTTATAGCGTGCTAT 59.113 47.619 17.65 17.65 41.58 2.97
929 1280 2.296471 AGCGAGGTTATAGCGTGCTATT 59.704 45.455 18.62 1.80 39.65 1.73
930 1281 3.057734 GCGAGGTTATAGCGTGCTATTT 58.942 45.455 18.62 0.14 39.65 1.40
931 1282 3.493503 GCGAGGTTATAGCGTGCTATTTT 59.506 43.478 18.62 0.00 39.65 1.82
932 1283 4.025145 GCGAGGTTATAGCGTGCTATTTTT 60.025 41.667 18.62 4.12 39.65 1.94
954 1305 1.756430 TTAGTGCTTGCAACACACCA 58.244 45.000 24.33 11.61 40.59 4.17
1177 3321 4.814294 CGCACTACCCGTGGCTCC 62.814 72.222 0.00 0.00 43.97 4.70
1212 3356 0.976641 CATTCTATAGCCTGCCGGGA 59.023 55.000 2.18 0.00 37.23 5.14
1323 3467 1.849976 GCTACGACGGCGCCTATACT 61.850 60.000 26.68 5.27 42.48 2.12
1470 3614 7.993183 AGTATTTTTCAGTTTCCTTCAGTGAGA 59.007 33.333 0.00 0.00 0.00 3.27
1476 3620 5.247110 TCAGTTTCCTTCAGTGAGATAGCTT 59.753 40.000 0.00 0.00 0.00 3.74
1750 3947 1.000955 AGGCGTCACAAAATCTCTCGT 59.999 47.619 0.00 0.00 0.00 4.18
1993 4193 1.666872 GTGGAAAGTACACGCCGCT 60.667 57.895 0.00 0.00 0.00 5.52
2057 4257 3.755628 GTGCTCGCTACCCCGTCA 61.756 66.667 0.00 0.00 0.00 4.35
2101 4301 2.435805 AGTATCCAATGCTGACGGACAT 59.564 45.455 0.00 0.00 0.00 3.06
2283 4486 0.317160 CTGCAACACCGTACAGGAGA 59.683 55.000 10.17 0.00 45.00 3.71
2343 4546 2.108157 TGAAGAAGGCACGTGCGT 59.892 55.556 32.35 30.51 43.26 5.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.477377 CCTTCGGATGCAATGGATCCA 60.477 52.381 28.82 18.88 39.65 3.41
40 41 4.508128 GGCGCGAAGTCCGGATCA 62.508 66.667 12.10 0.00 39.04 2.92
142 143 0.035152 TCCACTCGTCCGCCTAGTAA 60.035 55.000 0.00 0.00 0.00 2.24
184 185 1.138661 CATTCTCCTCCTCCTGTCTGC 59.861 57.143 0.00 0.00 0.00 4.26
240 244 2.287368 CGTTGCCCGGCTATTTAATTCC 60.287 50.000 11.61 0.00 0.00 3.01
444 458 3.364864 CGCATCAAACGGACTTCAAATGA 60.365 43.478 0.00 0.00 0.00 2.57
452 466 1.736645 CGGACGCATCAAACGGACT 60.737 57.895 0.00 0.00 34.00 3.85
515 866 1.587054 CGGACCTCTCAAACTCGCT 59.413 57.895 0.00 0.00 0.00 4.93
570 921 4.863491 ACTAGCTCAAAAACTACGAACGA 58.137 39.130 0.14 0.00 0.00 3.85
579 930 4.056050 TGAACTCGGACTAGCTCAAAAAC 58.944 43.478 0.00 0.00 0.00 2.43
601 952 0.550914 TGTGTGCCACCTTCCTTTCT 59.449 50.000 0.00 0.00 32.73 2.52
612 963 0.107643 TGATTCGGAAGTGTGTGCCA 59.892 50.000 0.00 0.00 0.00 4.92
616 967 2.146342 CTTGCTGATTCGGAAGTGTGT 58.854 47.619 0.00 0.00 0.00 3.72
765 1116 7.061789 GCTATTTTGTTGTAGCACGCTATTTTT 59.938 33.333 1.43 0.00 42.18 1.94
766 1117 6.526674 GCTATTTTGTTGTAGCACGCTATTTT 59.473 34.615 1.43 0.00 42.18 1.82
767 1118 6.027749 GCTATTTTGTTGTAGCACGCTATTT 58.972 36.000 1.43 0.00 42.18 1.40
768 1119 5.569413 GCTATTTTGTTGTAGCACGCTATT 58.431 37.500 1.43 0.00 42.18 1.73
769 1120 4.260212 CGCTATTTTGTTGTAGCACGCTAT 60.260 41.667 1.43 0.00 42.62 2.97
770 1121 3.061563 CGCTATTTTGTTGTAGCACGCTA 59.938 43.478 0.00 0.00 42.62 4.26
771 1122 2.159707 CGCTATTTTGTTGTAGCACGCT 60.160 45.455 0.00 0.00 42.62 5.07
772 1123 2.166007 CGCTATTTTGTTGTAGCACGC 58.834 47.619 5.39 0.00 42.62 5.34
773 1124 3.404564 GACGCTATTTTGTTGTAGCACG 58.595 45.455 5.39 0.00 42.62 5.34
774 1125 3.122278 TCGACGCTATTTTGTTGTAGCAC 59.878 43.478 5.39 0.00 42.62 4.40
775 1126 3.122278 GTCGACGCTATTTTGTTGTAGCA 59.878 43.478 0.00 0.00 42.62 3.49
776 1127 3.483085 GGTCGACGCTATTTTGTTGTAGC 60.483 47.826 9.92 0.00 39.86 3.58
777 1128 3.924686 AGGTCGACGCTATTTTGTTGTAG 59.075 43.478 9.92 0.00 0.00 2.74
778 1129 3.916761 AGGTCGACGCTATTTTGTTGTA 58.083 40.909 9.92 0.00 0.00 2.41
779 1130 2.735134 GAGGTCGACGCTATTTTGTTGT 59.265 45.455 9.92 0.00 0.00 3.32
780 1131 2.734606 TGAGGTCGACGCTATTTTGTTG 59.265 45.455 9.92 0.00 0.00 3.33
781 1132 3.034721 TGAGGTCGACGCTATTTTGTT 57.965 42.857 9.92 0.00 0.00 2.83
782 1133 2.736144 TGAGGTCGACGCTATTTTGT 57.264 45.000 9.92 0.00 0.00 2.83
783 1134 4.398549 TTTTGAGGTCGACGCTATTTTG 57.601 40.909 9.92 0.00 0.00 2.44
784 1135 6.715464 CATATTTTGAGGTCGACGCTATTTT 58.285 36.000 9.92 0.00 0.00 1.82
785 1136 5.277345 GCATATTTTGAGGTCGACGCTATTT 60.277 40.000 9.92 0.00 0.00 1.40
786 1137 4.211374 GCATATTTTGAGGTCGACGCTATT 59.789 41.667 9.92 0.00 0.00 1.73
787 1138 3.741344 GCATATTTTGAGGTCGACGCTAT 59.259 43.478 9.92 1.58 0.00 2.97
788 1139 3.120792 GCATATTTTGAGGTCGACGCTA 58.879 45.455 9.92 0.00 0.00 4.26
789 1140 1.933853 GCATATTTTGAGGTCGACGCT 59.066 47.619 9.92 7.88 0.00 5.07
790 1141 1.933853 AGCATATTTTGAGGTCGACGC 59.066 47.619 9.92 4.73 0.00 5.19
791 1142 2.930040 ACAGCATATTTTGAGGTCGACG 59.070 45.455 9.92 0.00 0.00 5.12
792 1143 4.946784 AACAGCATATTTTGAGGTCGAC 57.053 40.909 7.13 7.13 0.00 4.20
793 1144 4.570772 GCTAACAGCATATTTTGAGGTCGA 59.429 41.667 0.00 0.00 41.89 4.20
794 1145 4.550831 CGCTAACAGCATATTTTGAGGTCG 60.551 45.833 0.00 0.00 42.58 4.79
795 1146 4.332819 ACGCTAACAGCATATTTTGAGGTC 59.667 41.667 0.00 0.00 42.58 3.85
796 1147 4.094887 CACGCTAACAGCATATTTTGAGGT 59.905 41.667 0.00 0.00 42.58 3.85
797 1148 4.591202 CACGCTAACAGCATATTTTGAGG 58.409 43.478 0.00 0.00 42.58 3.86
798 1149 4.031028 GCACGCTAACAGCATATTTTGAG 58.969 43.478 0.00 0.00 42.58 3.02
799 1150 3.689161 AGCACGCTAACAGCATATTTTGA 59.311 39.130 0.00 0.00 42.58 2.69
800 1151 4.019919 AGCACGCTAACAGCATATTTTG 57.980 40.909 0.00 0.00 42.58 2.44
801 1152 7.411912 CGATATAGCACGCTAACAGCATATTTT 60.412 37.037 2.32 0.00 42.58 1.82
802 1153 6.035005 CGATATAGCACGCTAACAGCATATTT 59.965 38.462 2.32 0.00 42.58 1.40
803 1154 5.516696 CGATATAGCACGCTAACAGCATATT 59.483 40.000 2.32 0.00 42.58 1.28
804 1155 5.037385 CGATATAGCACGCTAACAGCATAT 58.963 41.667 2.32 0.00 42.58 1.78
805 1156 4.412207 CGATATAGCACGCTAACAGCATA 58.588 43.478 2.32 0.00 42.58 3.14
806 1157 3.245797 CGATATAGCACGCTAACAGCAT 58.754 45.455 2.32 0.00 42.58 3.79
807 1158 2.661594 CGATATAGCACGCTAACAGCA 58.338 47.619 2.32 0.00 42.58 4.41
829 1180 3.102276 CTCGCTAATAGCACGCTATAGC 58.898 50.000 15.09 15.09 42.58 2.97
830 1181 4.336101 GTCTCGCTAATAGCACGCTATAG 58.664 47.826 13.15 10.32 42.58 1.31
831 1182 3.181523 CGTCTCGCTAATAGCACGCTATA 60.182 47.826 13.15 1.16 42.58 1.31
832 1183 2.412977 CGTCTCGCTAATAGCACGCTAT 60.413 50.000 13.15 5.72 42.58 2.97
833 1184 1.070108 CGTCTCGCTAATAGCACGCTA 60.070 52.381 13.15 0.39 42.58 4.26
834 1185 0.317103 CGTCTCGCTAATAGCACGCT 60.317 55.000 13.15 0.00 42.58 5.07
835 1186 0.591741 ACGTCTCGCTAATAGCACGC 60.592 55.000 19.08 3.98 42.58 5.34
836 1187 1.513178 CAACGTCTCGCTAATAGCACG 59.487 52.381 18.01 18.01 42.58 5.34
837 1188 2.527100 ACAACGTCTCGCTAATAGCAC 58.473 47.619 13.15 2.25 42.58 4.40
838 1189 2.933495 ACAACGTCTCGCTAATAGCA 57.067 45.000 13.15 0.00 42.58 3.49
839 1190 3.481388 GTGTACAACGTCTCGCTAATAGC 59.519 47.826 1.41 1.41 38.02 2.97
840 1191 4.729086 CAGTGTACAACGTCTCGCTAATAG 59.271 45.833 0.00 0.00 0.00 1.73
841 1192 4.392754 TCAGTGTACAACGTCTCGCTAATA 59.607 41.667 0.00 0.00 0.00 0.98
842 1193 3.189910 TCAGTGTACAACGTCTCGCTAAT 59.810 43.478 0.00 0.00 0.00 1.73
843 1194 2.549329 TCAGTGTACAACGTCTCGCTAA 59.451 45.455 0.00 0.00 0.00 3.09
844 1195 2.145536 TCAGTGTACAACGTCTCGCTA 58.854 47.619 0.00 0.00 0.00 4.26
845 1196 0.949397 TCAGTGTACAACGTCTCGCT 59.051 50.000 0.00 0.00 0.00 4.93
846 1197 1.978542 ATCAGTGTACAACGTCTCGC 58.021 50.000 0.00 0.00 0.00 5.03
847 1198 7.909777 AAATATATCAGTGTACAACGTCTCG 57.090 36.000 0.00 0.00 0.00 4.04
848 1199 8.903723 GCTAAATATATCAGTGTACAACGTCTC 58.096 37.037 0.00 0.00 0.00 3.36
849 1200 7.590322 CGCTAAATATATCAGTGTACAACGTCT 59.410 37.037 0.00 0.00 0.00 4.18
850 1201 7.588854 TCGCTAAATATATCAGTGTACAACGTC 59.411 37.037 0.00 0.00 0.00 4.34
851 1202 7.420002 TCGCTAAATATATCAGTGTACAACGT 58.580 34.615 0.00 0.00 0.00 3.99
852 1203 7.847166 TCGCTAAATATATCAGTGTACAACG 57.153 36.000 0.00 0.00 0.00 4.10
853 1204 9.845305 GTTTCGCTAAATATATCAGTGTACAAC 57.155 33.333 0.00 0.00 0.00 3.32
854 1205 9.589111 TGTTTCGCTAAATATATCAGTGTACAA 57.411 29.630 0.00 0.00 0.00 2.41
855 1206 9.589111 TTGTTTCGCTAAATATATCAGTGTACA 57.411 29.630 0.00 0.00 0.00 2.90
867 1218 9.663904 GCATATTGAGAATTGTTTCGCTAAATA 57.336 29.630 0.00 0.00 36.93 1.40
868 1219 8.408601 AGCATATTGAGAATTGTTTCGCTAAAT 58.591 29.630 0.00 0.00 36.93 1.40
869 1220 7.761409 AGCATATTGAGAATTGTTTCGCTAAA 58.239 30.769 0.00 0.00 36.93 1.85
870 1221 7.320443 AGCATATTGAGAATTGTTTCGCTAA 57.680 32.000 0.00 0.00 36.93 3.09
871 1222 6.925610 AGCATATTGAGAATTGTTTCGCTA 57.074 33.333 0.00 0.00 36.93 4.26
872 1223 5.824904 AGCATATTGAGAATTGTTTCGCT 57.175 34.783 0.00 0.00 36.93 4.93
873 1224 7.479916 GCTATAGCATATTGAGAATTGTTTCGC 59.520 37.037 20.01 0.00 41.59 4.70
874 1225 7.685712 CGCTATAGCATATTGAGAATTGTTTCG 59.314 37.037 23.99 0.00 42.21 3.46
875 1226 8.499162 ACGCTATAGCATATTGAGAATTGTTTC 58.501 33.333 23.99 0.00 42.21 2.78
876 1227 8.285394 CACGCTATAGCATATTGAGAATTGTTT 58.715 33.333 23.99 0.00 42.21 2.83
877 1228 7.571983 GCACGCTATAGCATATTGAGAATTGTT 60.572 37.037 23.99 0.00 42.21 2.83
878 1229 6.128445 GCACGCTATAGCATATTGAGAATTGT 60.128 38.462 23.99 6.41 42.21 2.71
879 1230 6.091849 AGCACGCTATAGCATATTGAGAATTG 59.908 38.462 23.99 5.79 42.21 2.32
880 1231 6.169094 AGCACGCTATAGCATATTGAGAATT 58.831 36.000 23.99 0.00 42.21 2.17
881 1232 5.728471 AGCACGCTATAGCATATTGAGAAT 58.272 37.500 23.99 1.38 42.21 2.40
882 1233 5.139435 AGCACGCTATAGCATATTGAGAA 57.861 39.130 23.99 0.00 42.21 2.87
883 1234 4.790765 AGCACGCTATAGCATATTGAGA 57.209 40.909 23.99 0.00 42.21 3.27
884 1235 7.096271 GCTAATAGCACGCTATAGCATATTGAG 60.096 40.741 23.99 16.63 41.89 3.02
885 1236 6.697455 GCTAATAGCACGCTATAGCATATTGA 59.303 38.462 23.99 5.24 41.89 2.57
886 1237 6.345329 CGCTAATAGCACGCTATAGCATATTG 60.345 42.308 23.99 14.98 42.58 1.90
887 1238 5.687730 CGCTAATAGCACGCTATAGCATATT 59.312 40.000 23.99 20.32 42.58 1.28
888 1239 5.008712 TCGCTAATAGCACGCTATAGCATAT 59.991 40.000 23.99 12.75 42.58 1.78
889 1240 4.334481 TCGCTAATAGCACGCTATAGCATA 59.666 41.667 23.99 11.14 42.58 3.14
890 1241 3.128764 TCGCTAATAGCACGCTATAGCAT 59.871 43.478 23.99 6.50 42.58 3.79
891 1242 2.486592 TCGCTAATAGCACGCTATAGCA 59.513 45.455 23.99 4.83 42.58 3.49
892 1243 3.102276 CTCGCTAATAGCACGCTATAGC 58.898 50.000 15.09 15.09 42.58 2.97
893 1244 3.127203 ACCTCGCTAATAGCACGCTATAG 59.873 47.826 13.15 10.32 42.58 1.31
894 1245 3.079578 ACCTCGCTAATAGCACGCTATA 58.920 45.455 13.15 1.16 42.58 1.31
895 1246 1.887198 ACCTCGCTAATAGCACGCTAT 59.113 47.619 13.15 5.72 42.58 2.97
896 1247 1.315690 ACCTCGCTAATAGCACGCTA 58.684 50.000 13.15 0.39 42.58 4.26
897 1248 0.460311 AACCTCGCTAATAGCACGCT 59.540 50.000 13.15 0.00 42.58 5.07
898 1249 2.129823 TAACCTCGCTAATAGCACGC 57.870 50.000 13.15 0.00 42.58 5.34
899 1250 3.852536 GCTATAACCTCGCTAATAGCACG 59.147 47.826 13.15 2.14 43.98 5.34
900 1251 3.852536 CGCTATAACCTCGCTAATAGCAC 59.147 47.826 13.15 0.00 44.51 4.40
901 1252 3.504906 ACGCTATAACCTCGCTAATAGCA 59.495 43.478 13.15 0.00 44.51 3.49
902 1253 3.852536 CACGCTATAACCTCGCTAATAGC 59.147 47.826 1.41 1.41 42.10 2.97
903 1254 3.852536 GCACGCTATAACCTCGCTAATAG 59.147 47.826 0.00 0.00 0.00 1.73
904 1255 3.504906 AGCACGCTATAACCTCGCTAATA 59.495 43.478 0.00 0.00 0.00 0.98
905 1256 2.296471 AGCACGCTATAACCTCGCTAAT 59.704 45.455 0.00 0.00 0.00 1.73
906 1257 1.679680 AGCACGCTATAACCTCGCTAA 59.320 47.619 0.00 0.00 0.00 3.09
907 1258 1.315690 AGCACGCTATAACCTCGCTA 58.684 50.000 0.00 0.00 0.00 4.26
908 1259 1.315690 TAGCACGCTATAACCTCGCT 58.684 50.000 0.00 0.00 0.00 4.93
909 1260 2.349297 ATAGCACGCTATAACCTCGC 57.651 50.000 9.80 0.00 37.47 5.03
910 1261 5.652744 AAAAATAGCACGCTATAACCTCG 57.347 39.130 11.80 0.00 38.20 4.63
932 1283 3.056536 TGGTGTGTTGCAAGCACTAAAAA 60.057 39.130 24.38 8.63 37.70 1.94
933 1284 2.493675 TGGTGTGTTGCAAGCACTAAAA 59.506 40.909 24.38 11.68 37.70 1.52
934 1285 2.095461 TGGTGTGTTGCAAGCACTAAA 58.905 42.857 24.38 13.42 37.70 1.85
935 1286 1.675483 CTGGTGTGTTGCAAGCACTAA 59.325 47.619 24.38 16.10 37.70 2.24
936 1287 1.134250 TCTGGTGTGTTGCAAGCACTA 60.134 47.619 24.38 20.17 37.70 2.74
937 1288 0.394216 TCTGGTGTGTTGCAAGCACT 60.394 50.000 24.38 0.00 37.70 4.40
938 1289 0.029834 CTCTGGTGTGTTGCAAGCAC 59.970 55.000 19.97 19.97 37.37 4.40
939 1290 1.727511 GCTCTGGTGTGTTGCAAGCA 61.728 55.000 0.00 0.00 29.98 3.91
954 1305 1.579084 GACGTGGACGAGACAGCTCT 61.579 60.000 6.12 0.00 43.02 4.09
1177 3321 2.484287 AATGTCCGGTCAGGCAAGGG 62.484 60.000 7.60 0.00 40.77 3.95
1323 3467 1.613630 GGAGAAGGGGCTGACCAGA 60.614 63.158 0.00 0.00 42.91 3.86
1750 3947 2.951457 TGAACACACAGAGACGAACA 57.049 45.000 0.00 0.00 0.00 3.18
2101 4301 1.347707 CAGCCCACAAGGAGTAGTTCA 59.652 52.381 0.00 0.00 38.24 3.18
2268 4471 0.313043 CACGTCTCCTGTACGGTGTT 59.687 55.000 0.00 0.00 44.48 3.32
2275 4478 0.965866 CAGCTCCCACGTCTCCTGTA 60.966 60.000 0.00 0.00 0.00 2.74
2283 4486 2.283529 ACCGAATCAGCTCCCACGT 61.284 57.895 0.00 0.00 0.00 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.