Multiple sequence alignment - TraesCS1D01G291500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G291500 | chr1D | 100.000 | 3832 | 0 | 0 | 1 | 3832 | 389796056 | 389799887 | 0.000000e+00 | 7077.0 |
1 | TraesCS1D01G291500 | chr1D | 90.872 | 1457 | 89 | 19 | 633 | 2083 | 389429668 | 389428250 | 0.000000e+00 | 1914.0 |
2 | TraesCS1D01G291500 | chr1D | 94.428 | 1041 | 46 | 8 | 2217 | 3250 | 389428174 | 389427139 | 0.000000e+00 | 1591.0 |
3 | TraesCS1D01G291500 | chr1D | 97.246 | 581 | 12 | 2 | 3251 | 3827 | 26489180 | 26488600 | 0.000000e+00 | 981.0 |
4 | TraesCS1D01G291500 | chr1D | 79.266 | 1008 | 170 | 21 | 689 | 1685 | 390686716 | 390685737 | 0.000000e+00 | 667.0 |
5 | TraesCS1D01G291500 | chr1D | 79.146 | 1007 | 158 | 29 | 689 | 1682 | 390665741 | 390666708 | 0.000000e+00 | 649.0 |
6 | TraesCS1D01G291500 | chr1D | 85.034 | 441 | 35 | 17 | 490 | 902 | 389953074 | 389952637 | 1.650000e-113 | 420.0 |
7 | TraesCS1D01G291500 | chr1D | 88.542 | 96 | 1 | 1 | 516 | 611 | 389429744 | 389429659 | 1.460000e-19 | 108.0 |
8 | TraesCS1D01G291500 | chr1A | 88.834 | 1621 | 135 | 30 | 496 | 2092 | 488186827 | 488188425 | 0.000000e+00 | 1949.0 |
9 | TraesCS1D01G291500 | chr1A | 94.762 | 1031 | 46 | 7 | 2217 | 3241 | 488188465 | 488189493 | 0.000000e+00 | 1598.0 |
10 | TraesCS1D01G291500 | chr1A | 78.890 | 1009 | 160 | 34 | 689 | 1682 | 488229531 | 488228561 | 5.400000e-178 | 634.0 |
11 | TraesCS1D01G291500 | chr1A | 90.000 | 100 | 5 | 4 | 391 | 489 | 586124264 | 586124169 | 1.450000e-24 | 124.0 |
12 | TraesCS1D01G291500 | chr1A | 91.667 | 60 | 2 | 3 | 329 | 388 | 472580781 | 472580725 | 3.170000e-11 | 80.5 |
13 | TraesCS1D01G291500 | chr1A | 95.556 | 45 | 2 | 0 | 2085 | 2129 | 22882651 | 22882695 | 5.310000e-09 | 73.1 |
14 | TraesCS1D01G291500 | chr1A | 91.667 | 48 | 4 | 0 | 2091 | 2138 | 57311895 | 57311848 | 2.470000e-07 | 67.6 |
15 | TraesCS1D01G291500 | chr1A | 91.667 | 48 | 3 | 1 | 2892 | 2939 | 368828809 | 368828763 | 8.890000e-07 | 65.8 |
16 | TraesCS1D01G291500 | chr1A | 96.875 | 32 | 1 | 0 | 2176 | 2207 | 590991852 | 590991883 | 2.000000e-03 | 54.7 |
17 | TraesCS1D01G291500 | chr1B | 91.372 | 962 | 43 | 20 | 2315 | 3250 | 522755935 | 522756882 | 0.000000e+00 | 1280.0 |
18 | TraesCS1D01G291500 | chr1B | 93.505 | 816 | 39 | 3 | 1285 | 2086 | 522754995 | 522755810 | 0.000000e+00 | 1201.0 |
19 | TraesCS1D01G291500 | chr1B | 92.695 | 616 | 41 | 3 | 683 | 1297 | 522753908 | 522754520 | 0.000000e+00 | 885.0 |
20 | TraesCS1D01G291500 | chr1B | 78.895 | 1014 | 162 | 29 | 682 | 1682 | 523150654 | 523149680 | 1.160000e-179 | 640.0 |
21 | TraesCS1D01G291500 | chr1B | 78.797 | 1014 | 163 | 29 | 682 | 1682 | 523008760 | 523009734 | 5.400000e-178 | 634.0 |
22 | TraesCS1D01G291500 | chr1B | 94.118 | 187 | 9 | 2 | 500 | 684 | 522753690 | 522753876 | 2.250000e-72 | 283.0 |
23 | TraesCS1D01G291500 | chr1B | 92.157 | 102 | 5 | 2 | 388 | 489 | 9641661 | 9641759 | 1.440000e-29 | 141.0 |
24 | TraesCS1D01G291500 | chr1B | 94.444 | 72 | 4 | 0 | 2217 | 2288 | 522755873 | 522755944 | 1.130000e-20 | 111.0 |
25 | TraesCS1D01G291500 | chr3D | 97.623 | 589 | 10 | 3 | 3247 | 3832 | 564646571 | 564645984 | 0.000000e+00 | 1007.0 |
26 | TraesCS1D01G291500 | chr3D | 97.770 | 583 | 10 | 3 | 3251 | 3832 | 583607024 | 583606444 | 0.000000e+00 | 1002.0 |
27 | TraesCS1D01G291500 | chr3D | 97.274 | 587 | 11 | 2 | 3251 | 3832 | 421971024 | 421971610 | 0.000000e+00 | 990.0 |
28 | TraesCS1D01G291500 | chr3D | 87.918 | 389 | 31 | 12 | 5 | 389 | 564637475 | 564637851 | 9.770000e-121 | 444.0 |
29 | TraesCS1D01G291500 | chr3D | 90.625 | 64 | 3 | 3 | 329 | 392 | 101671335 | 101671275 | 8.820000e-12 | 82.4 |
30 | TraesCS1D01G291500 | chr3D | 100.000 | 40 | 0 | 0 | 2091 | 2130 | 61038238 | 61038199 | 1.480000e-09 | 75.0 |
31 | TraesCS1D01G291500 | chr3D | 97.674 | 43 | 1 | 0 | 2091 | 2133 | 331672467 | 331672425 | 1.480000e-09 | 75.0 |
32 | TraesCS1D01G291500 | chr3D | 100.000 | 30 | 0 | 0 | 2178 | 2207 | 26666594 | 26666623 | 5.350000e-04 | 56.5 |
33 | TraesCS1D01G291500 | chr3D | 100.000 | 30 | 0 | 0 | 2180 | 2209 | 474998189 | 474998218 | 5.350000e-04 | 56.5 |
34 | TraesCS1D01G291500 | chr3D | 90.476 | 42 | 2 | 2 | 2168 | 2207 | 59508600 | 59508641 | 2.000000e-03 | 54.7 |
35 | TraesCS1D01G291500 | chr6D | 97.260 | 584 | 14 | 2 | 3251 | 3832 | 34091127 | 34090544 | 0.000000e+00 | 989.0 |
36 | TraesCS1D01G291500 | chr6D | 93.095 | 391 | 14 | 7 | 1 | 390 | 460311850 | 460312228 | 9.300000e-156 | 560.0 |
37 | TraesCS1D01G291500 | chr6D | 98.039 | 51 | 0 | 1 | 341 | 391 | 20596813 | 20596764 | 1.900000e-13 | 87.9 |
38 | TraesCS1D01G291500 | chr6D | 100.000 | 40 | 0 | 0 | 2091 | 2130 | 8970259 | 8970298 | 1.480000e-09 | 75.0 |
39 | TraesCS1D01G291500 | chr6D | 100.000 | 39 | 0 | 0 | 2091 | 2129 | 17299450 | 17299488 | 5.310000e-09 | 73.1 |
40 | TraesCS1D01G291500 | chr6D | 100.000 | 39 | 0 | 0 | 2091 | 2129 | 97351841 | 97351879 | 5.310000e-09 | 73.1 |
41 | TraesCS1D01G291500 | chr6D | 100.000 | 39 | 0 | 0 | 2092 | 2130 | 451652187 | 451652225 | 5.310000e-09 | 73.1 |
42 | TraesCS1D01G291500 | chr6D | 100.000 | 39 | 0 | 0 | 2091 | 2129 | 458390173 | 458390135 | 5.310000e-09 | 73.1 |
43 | TraesCS1D01G291500 | chr6D | 95.455 | 44 | 2 | 0 | 2091 | 2134 | 36627719 | 36627762 | 1.910000e-08 | 71.3 |
44 | TraesCS1D01G291500 | chr6D | 100.000 | 32 | 0 | 0 | 2091 | 2122 | 451652184 | 451652153 | 4.130000e-05 | 60.2 |
45 | TraesCS1D01G291500 | chr6D | 94.595 | 37 | 1 | 1 | 2179 | 2215 | 62122696 | 62122731 | 5.350000e-04 | 56.5 |
46 | TraesCS1D01G291500 | chr6D | 100.000 | 29 | 0 | 0 | 2179 | 2207 | 219783723 | 219783695 | 2.000000e-03 | 54.7 |
47 | TraesCS1D01G291500 | chr6D | 100.000 | 28 | 0 | 0 | 2179 | 2206 | 146932571 | 146932544 | 7.000000e-03 | 52.8 |
48 | TraesCS1D01G291500 | chr6D | 100.000 | 28 | 0 | 0 | 2176 | 2203 | 451902401 | 451902428 | 7.000000e-03 | 52.8 |
49 | TraesCS1D01G291500 | chr2D | 96.575 | 584 | 18 | 2 | 3251 | 3832 | 101425553 | 101426136 | 0.000000e+00 | 966.0 |
50 | TraesCS1D01G291500 | chr2D | 95.238 | 588 | 22 | 4 | 3251 | 3832 | 542433752 | 542434339 | 0.000000e+00 | 926.0 |
51 | TraesCS1D01G291500 | chr2D | 92.157 | 102 | 5 | 2 | 388 | 489 | 26439885 | 26439787 | 1.440000e-29 | 141.0 |
52 | TraesCS1D01G291500 | chr2D | 85.000 | 60 | 6 | 2 | 2892 | 2951 | 559209302 | 559209246 | 1.490000e-04 | 58.4 |
53 | TraesCS1D01G291500 | chr5D | 95.068 | 588 | 23 | 3 | 3251 | 3832 | 548522454 | 548521867 | 0.000000e+00 | 920.0 |
54 | TraesCS1D01G291500 | chr5D | 95.076 | 589 | 19 | 5 | 3251 | 3832 | 556360886 | 556361471 | 0.000000e+00 | 918.0 |
55 | TraesCS1D01G291500 | chr5D | 88.889 | 72 | 3 | 3 | 418 | 489 | 433970864 | 433970798 | 2.450000e-12 | 84.2 |
56 | TraesCS1D01G291500 | chr5D | 97.619 | 42 | 1 | 0 | 2091 | 2132 | 485753413 | 485753372 | 5.310000e-09 | 73.1 |
57 | TraesCS1D01G291500 | chr5D | 100.000 | 30 | 0 | 0 | 2178 | 2207 | 332506252 | 332506281 | 5.350000e-04 | 56.5 |
58 | TraesCS1D01G291500 | chr7A | 91.534 | 626 | 51 | 2 | 1175 | 1799 | 299027716 | 299028340 | 0.000000e+00 | 861.0 |
59 | TraesCS1D01G291500 | chr7A | 97.143 | 35 | 0 | 1 | 2173 | 2207 | 112776984 | 112776951 | 1.490000e-04 | 58.4 |
60 | TraesCS1D01G291500 | chr7A | 97.143 | 35 | 0 | 1 | 2173 | 2207 | 112786242 | 112786275 | 1.490000e-04 | 58.4 |
61 | TraesCS1D01G291500 | chr7A | 97.143 | 35 | 0 | 1 | 2173 | 2207 | 112799865 | 112799832 | 1.490000e-04 | 58.4 |
62 | TraesCS1D01G291500 | chr7D | 93.316 | 389 | 13 | 7 | 1 | 388 | 608084711 | 608085087 | 2.580000e-156 | 562.0 |
63 | TraesCS1D01G291500 | chr7D | 100.000 | 44 | 0 | 0 | 2091 | 2134 | 242790616 | 242790573 | 8.820000e-12 | 82.4 |
64 | TraesCS1D01G291500 | chr7D | 89.062 | 64 | 3 | 2 | 2892 | 2951 | 506141362 | 506141299 | 4.110000e-10 | 76.8 |
65 | TraesCS1D01G291500 | chrUn | 92.327 | 391 | 16 | 7 | 1 | 390 | 117390536 | 117390913 | 9.360000e-151 | 544.0 |
66 | TraesCS1D01G291500 | chrUn | 89.216 | 102 | 11 | 0 | 388 | 489 | 73944984 | 73945085 | 1.120000e-25 | 128.0 |
67 | TraesCS1D01G291500 | chrUn | 100.000 | 28 | 0 | 0 | 2180 | 2207 | 28337442 | 28337469 | 7.000000e-03 | 52.8 |
68 | TraesCS1D01G291500 | chrUn | 100.000 | 28 | 0 | 0 | 2180 | 2207 | 89396763 | 89396790 | 7.000000e-03 | 52.8 |
69 | TraesCS1D01G291500 | chrUn | 100.000 | 28 | 0 | 0 | 2180 | 2207 | 110340464 | 110340491 | 7.000000e-03 | 52.8 |
70 | TraesCS1D01G291500 | chrUn | 100.000 | 28 | 0 | 0 | 2180 | 2207 | 371149024 | 371149051 | 7.000000e-03 | 52.8 |
71 | TraesCS1D01G291500 | chr4B | 92.031 | 389 | 17 | 7 | 1 | 388 | 314792134 | 314792509 | 5.630000e-148 | 534.0 |
72 | TraesCS1D01G291500 | chr4B | 92.031 | 389 | 16 | 8 | 1 | 388 | 365621192 | 365620818 | 2.030000e-147 | 532.0 |
73 | TraesCS1D01G291500 | chr4B | 87.406 | 397 | 32 | 11 | 1 | 392 | 65640000 | 65639617 | 1.260000e-119 | 440.0 |
74 | TraesCS1D01G291500 | chr4B | 91.176 | 102 | 6 | 2 | 388 | 489 | 131479550 | 131479648 | 6.680000e-28 | 135.0 |
75 | TraesCS1D01G291500 | chr4B | 100.000 | 32 | 0 | 0 | 2176 | 2207 | 399547196 | 399547227 | 4.130000e-05 | 60.2 |
76 | TraesCS1D01G291500 | chr4B | 92.308 | 39 | 2 | 1 | 2169 | 2207 | 215410579 | 215410542 | 2.000000e-03 | 54.7 |
77 | TraesCS1D01G291500 | chr4B | 100.000 | 29 | 0 | 0 | 2179 | 2207 | 541473604 | 541473632 | 2.000000e-03 | 54.7 |
78 | TraesCS1D01G291500 | chr4B | 96.970 | 33 | 0 | 1 | 2176 | 2207 | 656982035 | 656982003 | 2.000000e-03 | 54.7 |
79 | TraesCS1D01G291500 | chr4B | 100.000 | 28 | 0 | 0 | 2180 | 2207 | 260038700 | 260038673 | 7.000000e-03 | 52.8 |
80 | TraesCS1D01G291500 | chr7B | 85.222 | 203 | 13 | 13 | 5 | 206 | 640171515 | 640171701 | 3.910000e-45 | 193.0 |
81 | TraesCS1D01G291500 | chr7B | 91.803 | 61 | 2 | 3 | 329 | 389 | 333404524 | 333404467 | 8.820000e-12 | 82.4 |
82 | TraesCS1D01G291500 | chr2B | 84.653 | 202 | 14 | 11 | 6 | 206 | 24896082 | 24896267 | 6.540000e-43 | 185.0 |
83 | TraesCS1D01G291500 | chr2B | 84.615 | 65 | 5 | 3 | 2891 | 2954 | 742820325 | 742820265 | 4.130000e-05 | 60.2 |
84 | TraesCS1D01G291500 | chr3B | 91.176 | 102 | 6 | 2 | 388 | 489 | 813216400 | 813216498 | 6.680000e-28 | 135.0 |
85 | TraesCS1D01G291500 | chr3B | 96.341 | 82 | 2 | 1 | 388 | 469 | 355275314 | 355275234 | 2.400000e-27 | 134.0 |
86 | TraesCS1D01G291500 | chr3B | 90.196 | 102 | 9 | 1 | 388 | 489 | 355304686 | 355304586 | 8.640000e-27 | 132.0 |
87 | TraesCS1D01G291500 | chr5B | 88.235 | 102 | 9 | 2 | 388 | 489 | 696413959 | 696414057 | 6.720000e-23 | 119.0 |
88 | TraesCS1D01G291500 | chr5B | 91.935 | 62 | 2 | 2 | 329 | 390 | 662847224 | 662847282 | 2.450000e-12 | 84.2 |
89 | TraesCS1D01G291500 | chr5B | 91.803 | 61 | 2 | 2 | 329 | 389 | 669433006 | 669432949 | 8.820000e-12 | 82.4 |
90 | TraesCS1D01G291500 | chr2A | 89.773 | 88 | 6 | 1 | 683 | 770 | 777154349 | 777154433 | 4.050000e-20 | 110.0 |
91 | TraesCS1D01G291500 | chr2A | 84.848 | 99 | 11 | 2 | 672 | 770 | 777200210 | 777200304 | 3.150000e-16 | 97.1 |
92 | TraesCS1D01G291500 | chr2A | 85.000 | 60 | 6 | 2 | 2892 | 2951 | 699796402 | 699796346 | 1.490000e-04 | 58.4 |
93 | TraesCS1D01G291500 | chr3A | 89.286 | 84 | 6 | 1 | 683 | 766 | 603858647 | 603858567 | 6.770000e-18 | 102.0 |
94 | TraesCS1D01G291500 | chr4A | 94.643 | 56 | 1 | 2 | 341 | 396 | 707934079 | 707934132 | 6.820000e-13 | 86.1 |
95 | TraesCS1D01G291500 | chr4A | 97.059 | 34 | 1 | 0 | 2174 | 2207 | 703553539 | 703553506 | 1.490000e-04 | 58.4 |
96 | TraesCS1D01G291500 | chr6B | 97.727 | 44 | 1 | 0 | 2091 | 2134 | 84926397 | 84926440 | 4.110000e-10 | 76.8 |
97 | TraesCS1D01G291500 | chr6B | 94.444 | 36 | 1 | 1 | 2179 | 2214 | 135867578 | 135867612 | 2.000000e-03 | 54.7 |
98 | TraesCS1D01G291500 | chr6B | 96.970 | 33 | 0 | 1 | 2175 | 2207 | 633054122 | 633054091 | 2.000000e-03 | 54.7 |
99 | TraesCS1D01G291500 | chr6A | 93.878 | 49 | 3 | 0 | 2091 | 2139 | 511531100 | 511531052 | 1.480000e-09 | 75.0 |
100 | TraesCS1D01G291500 | chr4D | 97.674 | 43 | 1 | 0 | 2091 | 2133 | 32014382 | 32014340 | 1.480000e-09 | 75.0 |
101 | TraesCS1D01G291500 | chr4D | 100.000 | 40 | 0 | 0 | 2091 | 2130 | 293383803 | 293383842 | 1.480000e-09 | 75.0 |
102 | TraesCS1D01G291500 | chr4D | 100.000 | 40 | 0 | 0 | 2091 | 2130 | 379169379 | 379169418 | 1.480000e-09 | 75.0 |
103 | TraesCS1D01G291500 | chr4D | 93.478 | 46 | 2 | 1 | 2884 | 2928 | 358476944 | 358476899 | 2.470000e-07 | 67.6 |
104 | TraesCS1D01G291500 | chr4D | 90.698 | 43 | 2 | 2 | 2166 | 2207 | 333269756 | 333269797 | 5.350000e-04 | 56.5 |
105 | TraesCS1D01G291500 | chr4D | 96.970 | 33 | 0 | 1 | 2176 | 2207 | 85535456 | 85535488 | 2.000000e-03 | 54.7 |
106 | TraesCS1D01G291500 | chr4D | 94.444 | 36 | 1 | 1 | 2173 | 2207 | 497511019 | 497510984 | 2.000000e-03 | 54.7 |
107 | TraesCS1D01G291500 | chr4D | 96.875 | 32 | 0 | 1 | 2177 | 2207 | 478033960 | 478033991 | 7.000000e-03 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G291500 | chr1D | 389796056 | 389799887 | 3831 | False | 7077.000000 | 7077 | 100.000000 | 1 | 3832 | 1 | chr1D.!!$F1 | 3831 |
1 | TraesCS1D01G291500 | chr1D | 389427139 | 389429744 | 2605 | True | 1204.333333 | 1914 | 91.280667 | 516 | 3250 | 3 | chr1D.!!$R4 | 2734 |
2 | TraesCS1D01G291500 | chr1D | 26488600 | 26489180 | 580 | True | 981.000000 | 981 | 97.246000 | 3251 | 3827 | 1 | chr1D.!!$R1 | 576 |
3 | TraesCS1D01G291500 | chr1D | 390685737 | 390686716 | 979 | True | 667.000000 | 667 | 79.266000 | 689 | 1685 | 1 | chr1D.!!$R3 | 996 |
4 | TraesCS1D01G291500 | chr1D | 390665741 | 390666708 | 967 | False | 649.000000 | 649 | 79.146000 | 689 | 1682 | 1 | chr1D.!!$F2 | 993 |
5 | TraesCS1D01G291500 | chr1A | 488186827 | 488189493 | 2666 | False | 1773.500000 | 1949 | 91.798000 | 496 | 3241 | 2 | chr1A.!!$F3 | 2745 |
6 | TraesCS1D01G291500 | chr1A | 488228561 | 488229531 | 970 | True | 634.000000 | 634 | 78.890000 | 689 | 1682 | 1 | chr1A.!!$R4 | 993 |
7 | TraesCS1D01G291500 | chr1B | 522753690 | 522756882 | 3192 | False | 752.000000 | 1280 | 93.226800 | 500 | 3250 | 5 | chr1B.!!$F3 | 2750 |
8 | TraesCS1D01G291500 | chr1B | 523149680 | 523150654 | 974 | True | 640.000000 | 640 | 78.895000 | 682 | 1682 | 1 | chr1B.!!$R1 | 1000 |
9 | TraesCS1D01G291500 | chr1B | 523008760 | 523009734 | 974 | False | 634.000000 | 634 | 78.797000 | 682 | 1682 | 1 | chr1B.!!$F2 | 1000 |
10 | TraesCS1D01G291500 | chr3D | 564645984 | 564646571 | 587 | True | 1007.000000 | 1007 | 97.623000 | 3247 | 3832 | 1 | chr3D.!!$R4 | 585 |
11 | TraesCS1D01G291500 | chr3D | 583606444 | 583607024 | 580 | True | 1002.000000 | 1002 | 97.770000 | 3251 | 3832 | 1 | chr3D.!!$R5 | 581 |
12 | TraesCS1D01G291500 | chr3D | 421971024 | 421971610 | 586 | False | 990.000000 | 990 | 97.274000 | 3251 | 3832 | 1 | chr3D.!!$F3 | 581 |
13 | TraesCS1D01G291500 | chr6D | 34090544 | 34091127 | 583 | True | 989.000000 | 989 | 97.260000 | 3251 | 3832 | 1 | chr6D.!!$R2 | 581 |
14 | TraesCS1D01G291500 | chr2D | 101425553 | 101426136 | 583 | False | 966.000000 | 966 | 96.575000 | 3251 | 3832 | 1 | chr2D.!!$F1 | 581 |
15 | TraesCS1D01G291500 | chr2D | 542433752 | 542434339 | 587 | False | 926.000000 | 926 | 95.238000 | 3251 | 3832 | 1 | chr2D.!!$F2 | 581 |
16 | TraesCS1D01G291500 | chr5D | 548521867 | 548522454 | 587 | True | 920.000000 | 920 | 95.068000 | 3251 | 3832 | 1 | chr5D.!!$R3 | 581 |
17 | TraesCS1D01G291500 | chr5D | 556360886 | 556361471 | 585 | False | 918.000000 | 918 | 95.076000 | 3251 | 3832 | 1 | chr5D.!!$F2 | 581 |
18 | TraesCS1D01G291500 | chr7A | 299027716 | 299028340 | 624 | False | 861.000000 | 861 | 91.534000 | 1175 | 1799 | 1 | chr7A.!!$F2 | 624 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
125 | 126 | 0.028902 | GTTGAACAAGACACGGTGGC | 59.971 | 55.0 | 13.48 | 9.95 | 0.00 | 5.01 | F |
132 | 133 | 0.033504 | AAGACACGGTGGCACAGTAG | 59.966 | 55.0 | 22.59 | 17.98 | 41.80 | 2.57 | F |
145 | 146 | 0.035056 | ACAGTAGTGGCATGGCTTCC | 60.035 | 55.0 | 21.08 | 8.32 | 0.00 | 3.46 | F |
307 | 308 | 0.036858 | TTGCACGTGGCTGCTGTATA | 60.037 | 50.0 | 18.88 | 0.00 | 45.15 | 1.47 | F |
311 | 312 | 0.100682 | ACGTGGCTGCTGTATACGAG | 59.899 | 55.0 | 17.70 | 0.00 | 38.08 | 4.18 | F |
387 | 388 | 0.241749 | CCGGCTTTAAACGGTTTCCC | 59.758 | 55.0 | 9.78 | 6.02 | 44.85 | 3.97 | F |
1839 | 2395 | 0.268869 | TAGGATCCTCCCCATGCACT | 59.731 | 55.0 | 20.22 | 0.00 | 37.19 | 4.40 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2119 | 2684 | 0.034059 | CCATGCGACATACTCCCTCC | 59.966 | 60.0 | 0.00 | 0.00 | 0.00 | 4.30 | R |
2124 | 2689 | 0.179045 | AAGGGCCATGCGACATACTC | 60.179 | 55.0 | 6.18 | 0.00 | 0.00 | 2.59 | R |
2125 | 2690 | 0.464373 | CAAGGGCCATGCGACATACT | 60.464 | 55.0 | 6.18 | 0.00 | 0.00 | 2.12 | R |
2127 | 2692 | 0.747644 | CACAAGGGCCATGCGACATA | 60.748 | 55.0 | 9.01 | 0.00 | 0.00 | 2.29 | R |
2188 | 2761 | 2.163613 | GCAACTTATTTTGGGACGGAGG | 59.836 | 50.0 | 0.00 | 0.00 | 0.00 | 4.30 | R |
2345 | 2922 | 1.961793 | TTTTTGGGGAGACACGTCTG | 58.038 | 50.0 | 4.01 | 0.00 | 40.61 | 3.51 | R |
3419 | 4026 | 0.250989 | CTTTAGTCCCGGTTGGCCAA | 60.251 | 55.0 | 16.05 | 16.05 | 34.09 | 4.52 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
80 | 81 | 3.536917 | CGGTGCGGCTGGATAGGA | 61.537 | 66.667 | 0.00 | 0.00 | 0.00 | 2.94 |
81 | 82 | 2.423446 | GGTGCGGCTGGATAGGAG | 59.577 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
82 | 83 | 2.280457 | GTGCGGCTGGATAGGAGC | 60.280 | 66.667 | 0.00 | 0.00 | 35.57 | 4.70 |
83 | 84 | 3.916544 | TGCGGCTGGATAGGAGCG | 61.917 | 66.667 | 0.00 | 0.00 | 37.32 | 5.03 |
84 | 85 | 3.917760 | GCGGCTGGATAGGAGCGT | 61.918 | 66.667 | 0.00 | 0.00 | 37.32 | 5.07 |
85 | 86 | 2.028190 | CGGCTGGATAGGAGCGTG | 59.972 | 66.667 | 0.00 | 0.00 | 37.32 | 5.34 |
86 | 87 | 2.490148 | CGGCTGGATAGGAGCGTGA | 61.490 | 63.158 | 0.00 | 0.00 | 37.32 | 4.35 |
87 | 88 | 1.068250 | GGCTGGATAGGAGCGTGAC | 59.932 | 63.158 | 0.00 | 0.00 | 37.32 | 3.67 |
88 | 89 | 1.299468 | GCTGGATAGGAGCGTGACG | 60.299 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
89 | 90 | 1.725557 | GCTGGATAGGAGCGTGACGA | 61.726 | 60.000 | 10.10 | 0.00 | 0.00 | 4.20 |
90 | 91 | 0.955178 | CTGGATAGGAGCGTGACGAT | 59.045 | 55.000 | 10.10 | 0.01 | 0.00 | 3.73 |
91 | 92 | 0.668535 | TGGATAGGAGCGTGACGATG | 59.331 | 55.000 | 10.10 | 0.00 | 0.00 | 3.84 |
92 | 93 | 0.952280 | GGATAGGAGCGTGACGATGA | 59.048 | 55.000 | 10.10 | 0.00 | 0.00 | 2.92 |
93 | 94 | 1.335142 | GGATAGGAGCGTGACGATGAC | 60.335 | 57.143 | 10.10 | 0.00 | 0.00 | 3.06 |
94 | 95 | 1.604755 | GATAGGAGCGTGACGATGACT | 59.395 | 52.381 | 10.10 | 5.66 | 0.00 | 3.41 |
95 | 96 | 2.320745 | TAGGAGCGTGACGATGACTA | 57.679 | 50.000 | 10.10 | 4.54 | 0.00 | 2.59 |
96 | 97 | 0.733729 | AGGAGCGTGACGATGACTAC | 59.266 | 55.000 | 10.10 | 0.00 | 0.00 | 2.73 |
97 | 98 | 0.248539 | GGAGCGTGACGATGACTACC | 60.249 | 60.000 | 10.10 | 0.00 | 0.00 | 3.18 |
98 | 99 | 0.733729 | GAGCGTGACGATGACTACCT | 59.266 | 55.000 | 10.10 | 0.00 | 0.00 | 3.08 |
99 | 100 | 0.733729 | AGCGTGACGATGACTACCTC | 59.266 | 55.000 | 10.10 | 0.00 | 0.00 | 3.85 |
100 | 101 | 0.589229 | GCGTGACGATGACTACCTCG | 60.589 | 60.000 | 10.10 | 0.00 | 39.37 | 4.63 |
101 | 102 | 0.589229 | CGTGACGATGACTACCTCGC | 60.589 | 60.000 | 0.00 | 0.00 | 37.60 | 5.03 |
102 | 103 | 0.248539 | GTGACGATGACTACCTCGCC | 60.249 | 60.000 | 0.00 | 0.00 | 37.60 | 5.54 |
103 | 104 | 1.009900 | GACGATGACTACCTCGCCG | 60.010 | 63.158 | 0.00 | 0.00 | 37.60 | 6.46 |
104 | 105 | 2.331805 | CGATGACTACCTCGCCGG | 59.668 | 66.667 | 0.00 | 0.00 | 39.35 | 6.13 |
105 | 106 | 2.027751 | GATGACTACCTCGCCGGC | 59.972 | 66.667 | 19.07 | 19.07 | 35.61 | 6.13 |
106 | 107 | 3.825833 | GATGACTACCTCGCCGGCG | 62.826 | 68.421 | 42.13 | 42.13 | 41.35 | 6.46 |
108 | 109 | 4.125695 | GACTACCTCGCCGGCGTT | 62.126 | 66.667 | 44.16 | 31.40 | 40.74 | 4.84 |
109 | 110 | 4.430765 | ACTACCTCGCCGGCGTTG | 62.431 | 66.667 | 44.16 | 35.92 | 40.74 | 4.10 |
110 | 111 | 4.124351 | CTACCTCGCCGGCGTTGA | 62.124 | 66.667 | 44.16 | 27.36 | 40.74 | 3.18 |
111 | 112 | 3.636313 | CTACCTCGCCGGCGTTGAA | 62.636 | 63.158 | 44.16 | 26.97 | 40.74 | 2.69 |
112 | 113 | 3.919973 | TACCTCGCCGGCGTTGAAC | 62.920 | 63.158 | 44.16 | 5.73 | 40.74 | 3.18 |
114 | 115 | 3.342627 | CTCGCCGGCGTTGAACAA | 61.343 | 61.111 | 44.16 | 25.06 | 40.74 | 2.83 |
115 | 116 | 3.295228 | CTCGCCGGCGTTGAACAAG | 62.295 | 63.158 | 44.16 | 29.75 | 40.74 | 3.16 |
116 | 117 | 3.342627 | CGCCGGCGTTGAACAAGA | 61.343 | 61.111 | 39.71 | 0.00 | 34.35 | 3.02 |
117 | 118 | 2.251371 | GCCGGCGTTGAACAAGAC | 59.749 | 61.111 | 12.58 | 0.00 | 0.00 | 3.01 |
118 | 119 | 2.539338 | GCCGGCGTTGAACAAGACA | 61.539 | 57.895 | 12.58 | 0.00 | 0.00 | 3.41 |
119 | 120 | 1.278637 | CCGGCGTTGAACAAGACAC | 59.721 | 57.895 | 6.01 | 0.00 | 0.00 | 3.67 |
120 | 121 | 1.083657 | CGGCGTTGAACAAGACACG | 60.084 | 57.895 | 0.00 | 0.00 | 0.00 | 4.49 |
121 | 122 | 1.278637 | GGCGTTGAACAAGACACGG | 59.721 | 57.895 | 0.00 | 0.00 | 0.00 | 4.94 |
122 | 123 | 1.433837 | GGCGTTGAACAAGACACGGT | 61.434 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 |
123 | 124 | 0.315869 | GCGTTGAACAAGACACGGTG | 60.316 | 55.000 | 6.58 | 6.58 | 0.00 | 4.94 |
124 | 125 | 0.303493 | CGTTGAACAAGACACGGTGG | 59.697 | 55.000 | 13.48 | 0.00 | 0.00 | 4.61 |
125 | 126 | 0.028902 | GTTGAACAAGACACGGTGGC | 59.971 | 55.000 | 13.48 | 9.95 | 0.00 | 5.01 |
126 | 127 | 0.393132 | TTGAACAAGACACGGTGGCA | 60.393 | 50.000 | 17.70 | 0.00 | 0.00 | 4.92 |
127 | 128 | 1.092921 | TGAACAAGACACGGTGGCAC | 61.093 | 55.000 | 17.70 | 9.70 | 0.00 | 5.01 |
128 | 129 | 1.078072 | AACAAGACACGGTGGCACA | 60.078 | 52.632 | 20.82 | 0.00 | 0.00 | 4.57 |
129 | 130 | 1.095228 | AACAAGACACGGTGGCACAG | 61.095 | 55.000 | 20.82 | 18.52 | 41.80 | 3.66 |
130 | 131 | 1.523711 | CAAGACACGGTGGCACAGT | 60.524 | 57.895 | 20.82 | 19.28 | 41.80 | 3.55 |
131 | 132 | 0.249699 | CAAGACACGGTGGCACAGTA | 60.250 | 55.000 | 22.59 | 0.00 | 41.80 | 2.74 |
132 | 133 | 0.033504 | AAGACACGGTGGCACAGTAG | 59.966 | 55.000 | 22.59 | 17.98 | 41.80 | 2.57 |
133 | 134 | 1.113517 | AGACACGGTGGCACAGTAGT | 61.114 | 55.000 | 22.59 | 20.68 | 41.80 | 2.73 |
135 | 136 | 1.667830 | CACGGTGGCACAGTAGTGG | 60.668 | 63.158 | 22.59 | 7.30 | 45.98 | 4.00 |
141 | 142 | 3.190878 | GCACAGTAGTGGCATGGC | 58.809 | 61.111 | 13.29 | 13.29 | 45.98 | 4.40 |
142 | 143 | 1.377725 | GCACAGTAGTGGCATGGCT | 60.378 | 57.895 | 21.08 | 3.30 | 45.98 | 4.75 |
143 | 144 | 0.962356 | GCACAGTAGTGGCATGGCTT | 60.962 | 55.000 | 21.08 | 11.12 | 45.98 | 4.35 |
144 | 145 | 1.089920 | CACAGTAGTGGCATGGCTTC | 58.910 | 55.000 | 21.08 | 13.13 | 42.13 | 3.86 |
145 | 146 | 0.035056 | ACAGTAGTGGCATGGCTTCC | 60.035 | 55.000 | 21.08 | 8.32 | 0.00 | 3.46 |
146 | 147 | 1.091771 | CAGTAGTGGCATGGCTTCCG | 61.092 | 60.000 | 21.08 | 0.42 | 0.00 | 4.30 |
147 | 148 | 1.078426 | GTAGTGGCATGGCTTCCGT | 60.078 | 57.895 | 21.08 | 3.00 | 0.00 | 4.69 |
148 | 149 | 0.177141 | GTAGTGGCATGGCTTCCGTA | 59.823 | 55.000 | 21.08 | 0.00 | 0.00 | 4.02 |
149 | 150 | 0.464036 | TAGTGGCATGGCTTCCGTAG | 59.536 | 55.000 | 21.08 | 0.00 | 0.00 | 3.51 |
162 | 163 | 4.492160 | CGTAGCCGGCGAGCAGAA | 62.492 | 66.667 | 23.20 | 0.00 | 34.23 | 3.02 |
163 | 164 | 2.125673 | GTAGCCGGCGAGCAGAAA | 60.126 | 61.111 | 23.20 | 0.00 | 34.23 | 2.52 |
164 | 165 | 2.167861 | GTAGCCGGCGAGCAGAAAG | 61.168 | 63.158 | 23.20 | 0.00 | 34.23 | 2.62 |
165 | 166 | 3.371097 | TAGCCGGCGAGCAGAAAGG | 62.371 | 63.158 | 23.20 | 0.00 | 34.23 | 3.11 |
166 | 167 | 4.760047 | GCCGGCGAGCAGAAAGGA | 62.760 | 66.667 | 12.58 | 0.00 | 0.00 | 3.36 |
167 | 168 | 2.510238 | CCGGCGAGCAGAAAGGAG | 60.510 | 66.667 | 9.30 | 0.00 | 0.00 | 3.69 |
168 | 169 | 2.573869 | CGGCGAGCAGAAAGGAGA | 59.426 | 61.111 | 0.00 | 0.00 | 0.00 | 3.71 |
169 | 170 | 1.079819 | CGGCGAGCAGAAAGGAGAA | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 2.87 |
170 | 171 | 1.080995 | CGGCGAGCAGAAAGGAGAAG | 61.081 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
171 | 172 | 0.247736 | GGCGAGCAGAAAGGAGAAGA | 59.752 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
172 | 173 | 1.338200 | GGCGAGCAGAAAGGAGAAGAA | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
173 | 174 | 2.626840 | GCGAGCAGAAAGGAGAAGAAT | 58.373 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
174 | 175 | 3.430929 | GGCGAGCAGAAAGGAGAAGAATA | 60.431 | 47.826 | 0.00 | 0.00 | 0.00 | 1.75 |
175 | 176 | 3.801594 | GCGAGCAGAAAGGAGAAGAATAG | 59.198 | 47.826 | 0.00 | 0.00 | 0.00 | 1.73 |
176 | 177 | 4.440802 | GCGAGCAGAAAGGAGAAGAATAGA | 60.441 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
177 | 178 | 5.738783 | GCGAGCAGAAAGGAGAAGAATAGAT | 60.739 | 44.000 | 0.00 | 0.00 | 0.00 | 1.98 |
178 | 179 | 5.691305 | CGAGCAGAAAGGAGAAGAATAGATG | 59.309 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
179 | 180 | 6.460814 | CGAGCAGAAAGGAGAAGAATAGATGA | 60.461 | 42.308 | 0.00 | 0.00 | 0.00 | 2.92 |
180 | 181 | 6.819284 | AGCAGAAAGGAGAAGAATAGATGAG | 58.181 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
181 | 182 | 6.610830 | AGCAGAAAGGAGAAGAATAGATGAGA | 59.389 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
182 | 183 | 7.290714 | AGCAGAAAGGAGAAGAATAGATGAGAT | 59.709 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
183 | 184 | 7.599998 | GCAGAAAGGAGAAGAATAGATGAGATC | 59.400 | 40.741 | 0.00 | 0.00 | 0.00 | 2.75 |
184 | 185 | 8.863086 | CAGAAAGGAGAAGAATAGATGAGATCT | 58.137 | 37.037 | 0.00 | 0.00 | 43.33 | 2.75 |
185 | 186 | 9.082313 | AGAAAGGAGAAGAATAGATGAGATCTC | 57.918 | 37.037 | 16.21 | 16.21 | 40.76 | 2.75 |
186 | 187 | 7.452880 | AAGGAGAAGAATAGATGAGATCTCG | 57.547 | 40.000 | 17.76 | 0.00 | 40.76 | 4.04 |
187 | 188 | 5.415701 | AGGAGAAGAATAGATGAGATCTCGC | 59.584 | 44.000 | 17.76 | 12.12 | 40.76 | 5.03 |
188 | 189 | 5.415701 | GGAGAAGAATAGATGAGATCTCGCT | 59.584 | 44.000 | 17.76 | 18.13 | 40.76 | 4.93 |
189 | 190 | 6.403636 | GGAGAAGAATAGATGAGATCTCGCTC | 60.404 | 46.154 | 17.76 | 15.83 | 40.76 | 5.03 |
190 | 191 | 4.944962 | AGAATAGATGAGATCTCGCTCG | 57.055 | 45.455 | 17.76 | 0.00 | 40.76 | 5.03 |
191 | 192 | 4.323417 | AGAATAGATGAGATCTCGCTCGT | 58.677 | 43.478 | 17.76 | 8.82 | 40.76 | 4.18 |
192 | 193 | 4.759693 | AGAATAGATGAGATCTCGCTCGTT | 59.240 | 41.667 | 17.76 | 15.11 | 40.76 | 3.85 |
193 | 194 | 2.772568 | AGATGAGATCTCGCTCGTTG | 57.227 | 50.000 | 17.76 | 0.00 | 37.73 | 4.10 |
194 | 195 | 2.020720 | AGATGAGATCTCGCTCGTTGT | 58.979 | 47.619 | 17.76 | 0.00 | 37.73 | 3.32 |
195 | 196 | 2.115595 | GATGAGATCTCGCTCGTTGTG | 58.884 | 52.381 | 17.76 | 0.00 | 37.73 | 3.33 |
196 | 197 | 0.881796 | TGAGATCTCGCTCGTTGTGT | 59.118 | 50.000 | 17.76 | 0.00 | 37.73 | 3.72 |
197 | 198 | 1.263776 | GAGATCTCGCTCGTTGTGTG | 58.736 | 55.000 | 7.04 | 0.00 | 0.00 | 3.82 |
198 | 199 | 0.598562 | AGATCTCGCTCGTTGTGTGT | 59.401 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
199 | 200 | 0.710567 | GATCTCGCTCGTTGTGTGTG | 59.289 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
200 | 201 | 0.313987 | ATCTCGCTCGTTGTGTGTGA | 59.686 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
201 | 202 | 0.313987 | TCTCGCTCGTTGTGTGTGAT | 59.686 | 50.000 | 0.00 | 0.00 | 30.88 | 3.06 |
202 | 203 | 0.436150 | CTCGCTCGTTGTGTGTGATG | 59.564 | 55.000 | 0.00 | 0.00 | 30.88 | 3.07 |
203 | 204 | 0.943835 | TCGCTCGTTGTGTGTGATGG | 60.944 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
204 | 205 | 0.943835 | CGCTCGTTGTGTGTGATGGA | 60.944 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
205 | 206 | 1.225855 | GCTCGTTGTGTGTGATGGAA | 58.774 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
206 | 207 | 1.195448 | GCTCGTTGTGTGTGATGGAAG | 59.805 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
207 | 208 | 2.754472 | CTCGTTGTGTGTGATGGAAGA | 58.246 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
208 | 209 | 2.476619 | CTCGTTGTGTGTGATGGAAGAC | 59.523 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
209 | 210 | 1.192312 | CGTTGTGTGTGATGGAAGACG | 59.808 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
210 | 211 | 2.479837 | GTTGTGTGTGATGGAAGACGA | 58.520 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
211 | 212 | 2.438868 | TGTGTGTGATGGAAGACGAG | 57.561 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
212 | 213 | 1.960689 | TGTGTGTGATGGAAGACGAGA | 59.039 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
213 | 214 | 2.562738 | TGTGTGTGATGGAAGACGAGAT | 59.437 | 45.455 | 0.00 | 0.00 | 0.00 | 2.75 |
214 | 215 | 2.926200 | GTGTGTGATGGAAGACGAGATG | 59.074 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
215 | 216 | 1.929836 | GTGTGATGGAAGACGAGATGC | 59.070 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
216 | 217 | 1.550072 | TGTGATGGAAGACGAGATGCA | 59.450 | 47.619 | 0.00 | 0.00 | 0.00 | 3.96 |
217 | 218 | 2.028203 | TGTGATGGAAGACGAGATGCAA | 60.028 | 45.455 | 0.00 | 0.00 | 0.00 | 4.08 |
218 | 219 | 3.002791 | GTGATGGAAGACGAGATGCAAA | 58.997 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
219 | 220 | 3.624861 | GTGATGGAAGACGAGATGCAAAT | 59.375 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
220 | 221 | 3.624410 | TGATGGAAGACGAGATGCAAATG | 59.376 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
221 | 222 | 3.333029 | TGGAAGACGAGATGCAAATGA | 57.667 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
222 | 223 | 3.264947 | TGGAAGACGAGATGCAAATGAG | 58.735 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
223 | 224 | 3.265791 | GGAAGACGAGATGCAAATGAGT | 58.734 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
224 | 225 | 3.063180 | GGAAGACGAGATGCAAATGAGTG | 59.937 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
225 | 226 | 2.625737 | AGACGAGATGCAAATGAGTGG | 58.374 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
226 | 227 | 2.027745 | AGACGAGATGCAAATGAGTGGT | 60.028 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
227 | 228 | 2.744202 | GACGAGATGCAAATGAGTGGTT | 59.256 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
228 | 229 | 2.485426 | ACGAGATGCAAATGAGTGGTTG | 59.515 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
229 | 230 | 2.485426 | CGAGATGCAAATGAGTGGTTGT | 59.515 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
230 | 231 | 3.684305 | CGAGATGCAAATGAGTGGTTGTA | 59.316 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
231 | 232 | 4.333649 | CGAGATGCAAATGAGTGGTTGTAT | 59.666 | 41.667 | 0.00 | 0.00 | 33.46 | 2.29 |
232 | 233 | 5.571784 | AGATGCAAATGAGTGGTTGTATG | 57.428 | 39.130 | 0.00 | 0.00 | 31.31 | 2.39 |
233 | 234 | 4.400251 | AGATGCAAATGAGTGGTTGTATGG | 59.600 | 41.667 | 0.00 | 0.00 | 31.31 | 2.74 |
234 | 235 | 3.760738 | TGCAAATGAGTGGTTGTATGGA | 58.239 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
235 | 236 | 3.758023 | TGCAAATGAGTGGTTGTATGGAG | 59.242 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
236 | 237 | 3.428045 | GCAAATGAGTGGTTGTATGGAGC | 60.428 | 47.826 | 0.00 | 0.00 | 0.00 | 4.70 |
237 | 238 | 4.012374 | CAAATGAGTGGTTGTATGGAGCT | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 4.09 |
238 | 239 | 2.768253 | TGAGTGGTTGTATGGAGCTG | 57.232 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
239 | 240 | 1.977854 | TGAGTGGTTGTATGGAGCTGT | 59.022 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
240 | 241 | 2.289631 | TGAGTGGTTGTATGGAGCTGTG | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
241 | 242 | 1.977854 | AGTGGTTGTATGGAGCTGTGA | 59.022 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
242 | 243 | 2.371841 | AGTGGTTGTATGGAGCTGTGAA | 59.628 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
243 | 244 | 3.146066 | GTGGTTGTATGGAGCTGTGAAA | 58.854 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
244 | 245 | 3.568007 | GTGGTTGTATGGAGCTGTGAAAA | 59.432 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
245 | 246 | 3.820467 | TGGTTGTATGGAGCTGTGAAAAG | 59.180 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
246 | 247 | 4.072131 | GGTTGTATGGAGCTGTGAAAAGA | 58.928 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
247 | 248 | 4.702131 | GGTTGTATGGAGCTGTGAAAAGAT | 59.298 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
248 | 249 | 5.880332 | GGTTGTATGGAGCTGTGAAAAGATA | 59.120 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
249 | 250 | 6.374333 | GGTTGTATGGAGCTGTGAAAAGATAA | 59.626 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
250 | 251 | 7.414540 | GGTTGTATGGAGCTGTGAAAAGATAAG | 60.415 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
251 | 252 | 6.115446 | TGTATGGAGCTGTGAAAAGATAAGG | 58.885 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
252 | 253 | 4.908601 | TGGAGCTGTGAAAAGATAAGGA | 57.091 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
253 | 254 | 5.441718 | TGGAGCTGTGAAAAGATAAGGAT | 57.558 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
254 | 255 | 6.560003 | TGGAGCTGTGAAAAGATAAGGATA | 57.440 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
255 | 256 | 7.141758 | TGGAGCTGTGAAAAGATAAGGATAT | 57.858 | 36.000 | 0.00 | 0.00 | 0.00 | 1.63 |
256 | 257 | 8.262601 | TGGAGCTGTGAAAAGATAAGGATATA | 57.737 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
257 | 258 | 8.713971 | TGGAGCTGTGAAAAGATAAGGATATAA | 58.286 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
258 | 259 | 9.561069 | GGAGCTGTGAAAAGATAAGGATATAAA | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
260 | 261 | 9.566432 | AGCTGTGAAAAGATAAGGATATAAAGG | 57.434 | 33.333 | 0.00 | 0.00 | 0.00 | 3.11 |
261 | 262 | 9.561069 | GCTGTGAAAAGATAAGGATATAAAGGA | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
265 | 266 | 9.982651 | TGAAAAGATAAGGATATAAAGGAGACG | 57.017 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
266 | 267 | 9.984190 | GAAAAGATAAGGATATAAAGGAGACGT | 57.016 | 33.333 | 0.00 | 0.00 | 0.00 | 4.34 |
267 | 268 | 9.765795 | AAAAGATAAGGATATAAAGGAGACGTG | 57.234 | 33.333 | 0.00 | 0.00 | 0.00 | 4.49 |
268 | 269 | 8.707796 | AAGATAAGGATATAAAGGAGACGTGA | 57.292 | 34.615 | 0.00 | 0.00 | 0.00 | 4.35 |
269 | 270 | 8.707796 | AGATAAGGATATAAAGGAGACGTGAA | 57.292 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
270 | 271 | 9.315363 | AGATAAGGATATAAAGGAGACGTGAAT | 57.685 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
271 | 272 | 9.930693 | GATAAGGATATAAAGGAGACGTGAATT | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
272 | 273 | 9.930693 | ATAAGGATATAAAGGAGACGTGAATTC | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
273 | 274 | 7.604657 | AGGATATAAAGGAGACGTGAATTCT | 57.395 | 36.000 | 7.05 | 0.00 | 0.00 | 2.40 |
274 | 275 | 8.024145 | AGGATATAAAGGAGACGTGAATTCTT | 57.976 | 34.615 | 7.05 | 0.00 | 0.00 | 2.52 |
275 | 276 | 7.928706 | AGGATATAAAGGAGACGTGAATTCTTG | 59.071 | 37.037 | 7.05 | 1.53 | 0.00 | 3.02 |
276 | 277 | 7.171678 | GGATATAAAGGAGACGTGAATTCTTGG | 59.828 | 40.741 | 7.05 | 0.00 | 0.00 | 3.61 |
277 | 278 | 3.771577 | AAGGAGACGTGAATTCTTGGT | 57.228 | 42.857 | 7.05 | 1.78 | 0.00 | 3.67 |
278 | 279 | 3.045601 | AGGAGACGTGAATTCTTGGTG | 57.954 | 47.619 | 7.05 | 0.00 | 0.00 | 4.17 |
279 | 280 | 2.076863 | GGAGACGTGAATTCTTGGTGG | 58.923 | 52.381 | 7.05 | 0.00 | 0.00 | 4.61 |
280 | 281 | 1.464997 | GAGACGTGAATTCTTGGTGGC | 59.535 | 52.381 | 7.05 | 0.00 | 0.00 | 5.01 |
281 | 282 | 0.521735 | GACGTGAATTCTTGGTGGCC | 59.478 | 55.000 | 7.05 | 0.00 | 0.00 | 5.36 |
282 | 283 | 0.893727 | ACGTGAATTCTTGGTGGCCC | 60.894 | 55.000 | 7.05 | 0.00 | 0.00 | 5.80 |
283 | 284 | 1.595093 | CGTGAATTCTTGGTGGCCCC | 61.595 | 60.000 | 7.05 | 0.85 | 0.00 | 5.80 |
284 | 285 | 0.541764 | GTGAATTCTTGGTGGCCCCA | 60.542 | 55.000 | 8.74 | 8.74 | 43.27 | 4.96 |
285 | 286 | 0.251742 | TGAATTCTTGGTGGCCCCAG | 60.252 | 55.000 | 12.12 | 7.81 | 46.31 | 4.45 |
286 | 287 | 1.607801 | GAATTCTTGGTGGCCCCAGC | 61.608 | 60.000 | 12.12 | 9.48 | 46.31 | 4.85 |
287 | 288 | 2.097978 | AATTCTTGGTGGCCCCAGCT | 62.098 | 55.000 | 16.52 | 0.00 | 46.31 | 4.24 |
288 | 289 | 2.097978 | ATTCTTGGTGGCCCCAGCTT | 62.098 | 55.000 | 16.52 | 0.00 | 46.31 | 3.74 |
289 | 290 | 2.203684 | CTTGGTGGCCCCAGCTTT | 60.204 | 61.111 | 16.52 | 0.00 | 46.31 | 3.51 |
290 | 291 | 2.523902 | TTGGTGGCCCCAGCTTTG | 60.524 | 61.111 | 16.52 | 0.00 | 46.31 | 2.77 |
293 | 294 | 3.994853 | GTGGCCCCAGCTTTGCAC | 61.995 | 66.667 | 0.00 | 0.00 | 39.73 | 4.57 |
296 | 297 | 4.347453 | GCCCCAGCTTTGCACGTG | 62.347 | 66.667 | 12.28 | 12.28 | 35.50 | 4.49 |
297 | 298 | 3.673484 | CCCCAGCTTTGCACGTGG | 61.673 | 66.667 | 18.88 | 0.86 | 0.00 | 4.94 |
298 | 299 | 4.347453 | CCCAGCTTTGCACGTGGC | 62.347 | 66.667 | 18.88 | 12.10 | 45.13 | 5.01 |
299 | 300 | 3.289834 | CCAGCTTTGCACGTGGCT | 61.290 | 61.111 | 18.88 | 14.36 | 45.15 | 4.75 |
300 | 301 | 2.050714 | CAGCTTTGCACGTGGCTG | 60.051 | 61.111 | 23.71 | 23.71 | 44.45 | 4.85 |
301 | 302 | 3.969802 | AGCTTTGCACGTGGCTGC | 61.970 | 61.111 | 18.88 | 14.08 | 45.15 | 5.25 |
302 | 303 | 3.969802 | GCTTTGCACGTGGCTGCT | 61.970 | 61.111 | 18.88 | 0.00 | 45.15 | 4.24 |
303 | 304 | 2.050714 | CTTTGCACGTGGCTGCTG | 60.051 | 61.111 | 18.88 | 0.00 | 45.15 | 4.41 |
304 | 305 | 2.828095 | TTTGCACGTGGCTGCTGT | 60.828 | 55.556 | 18.88 | 0.00 | 45.15 | 4.40 |
305 | 306 | 1.506309 | CTTTGCACGTGGCTGCTGTA | 61.506 | 55.000 | 18.88 | 0.00 | 45.15 | 2.74 |
306 | 307 | 0.888736 | TTTGCACGTGGCTGCTGTAT | 60.889 | 50.000 | 18.88 | 0.00 | 45.15 | 2.29 |
307 | 308 | 0.036858 | TTGCACGTGGCTGCTGTATA | 60.037 | 50.000 | 18.88 | 0.00 | 45.15 | 1.47 |
308 | 309 | 0.739462 | TGCACGTGGCTGCTGTATAC | 60.739 | 55.000 | 18.88 | 0.00 | 45.15 | 1.47 |
309 | 310 | 1.752501 | GCACGTGGCTGCTGTATACG | 61.753 | 60.000 | 18.88 | 12.18 | 40.25 | 3.06 |
310 | 311 | 0.179148 | CACGTGGCTGCTGTATACGA | 60.179 | 55.000 | 7.95 | 0.00 | 38.08 | 3.43 |
311 | 312 | 0.100682 | ACGTGGCTGCTGTATACGAG | 59.899 | 55.000 | 17.70 | 0.00 | 38.08 | 4.18 |
312 | 313 | 0.380733 | CGTGGCTGCTGTATACGAGA | 59.619 | 55.000 | 0.00 | 0.00 | 36.94 | 4.04 |
313 | 314 | 1.598183 | CGTGGCTGCTGTATACGAGAG | 60.598 | 57.143 | 0.00 | 0.00 | 36.94 | 3.20 |
314 | 315 | 1.676529 | GTGGCTGCTGTATACGAGAGA | 59.323 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
315 | 316 | 1.950216 | TGGCTGCTGTATACGAGAGAG | 59.050 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
316 | 317 | 1.335506 | GGCTGCTGTATACGAGAGAGC | 60.336 | 57.143 | 0.00 | 5.43 | 0.00 | 4.09 |
317 | 318 | 1.661743 | GCTGCTGTATACGAGAGAGCG | 60.662 | 57.143 | 7.42 | 0.00 | 32.05 | 5.03 |
318 | 319 | 1.867865 | CTGCTGTATACGAGAGAGCGA | 59.132 | 52.381 | 7.42 | 0.00 | 32.05 | 4.93 |
319 | 320 | 1.867865 | TGCTGTATACGAGAGAGCGAG | 59.132 | 52.381 | 7.42 | 0.00 | 32.05 | 5.03 |
320 | 321 | 1.399215 | GCTGTATACGAGAGAGCGAGC | 60.399 | 57.143 | 0.00 | 0.00 | 34.83 | 5.03 |
321 | 322 | 0.859882 | TGTATACGAGAGAGCGAGCG | 59.140 | 55.000 | 0.00 | 0.00 | 34.83 | 5.03 |
322 | 323 | 0.860533 | GTATACGAGAGAGCGAGCGT | 59.139 | 55.000 | 0.00 | 0.00 | 40.42 | 5.07 |
323 | 324 | 0.859882 | TATACGAGAGAGCGAGCGTG | 59.140 | 55.000 | 0.00 | 0.00 | 37.56 | 5.34 |
324 | 325 | 0.810426 | ATACGAGAGAGCGAGCGTGA | 60.810 | 55.000 | 0.00 | 0.00 | 37.56 | 4.35 |
325 | 326 | 1.422179 | TACGAGAGAGCGAGCGTGAG | 61.422 | 60.000 | 0.00 | 0.00 | 37.56 | 3.51 |
338 | 339 | 4.357947 | GTGAGCTGCGTGACCGGA | 62.358 | 66.667 | 9.46 | 0.00 | 33.68 | 5.14 |
339 | 340 | 3.611674 | TGAGCTGCGTGACCGGAA | 61.612 | 61.111 | 9.46 | 0.00 | 32.59 | 4.30 |
340 | 341 | 2.811317 | GAGCTGCGTGACCGGAAG | 60.811 | 66.667 | 9.46 | 0.00 | 32.59 | 3.46 |
341 | 342 | 3.282745 | GAGCTGCGTGACCGGAAGA | 62.283 | 63.158 | 9.46 | 0.00 | 32.59 | 2.87 |
342 | 343 | 2.811317 | GCTGCGTGACCGGAAGAG | 60.811 | 66.667 | 9.46 | 0.00 | 32.59 | 2.85 |
343 | 344 | 2.962569 | CTGCGTGACCGGAAGAGA | 59.037 | 61.111 | 9.46 | 0.00 | 32.59 | 3.10 |
344 | 345 | 1.444553 | CTGCGTGACCGGAAGAGAC | 60.445 | 63.158 | 9.46 | 0.00 | 32.59 | 3.36 |
345 | 346 | 2.126031 | GCGTGACCGGAAGAGACC | 60.126 | 66.667 | 9.46 | 0.00 | 33.68 | 3.85 |
354 | 355 | 3.863407 | GGAAGAGACCGGCTGAATT | 57.137 | 52.632 | 0.00 | 0.00 | 0.00 | 2.17 |
355 | 356 | 2.115343 | GGAAGAGACCGGCTGAATTT | 57.885 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
356 | 357 | 2.437413 | GGAAGAGACCGGCTGAATTTT | 58.563 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
357 | 358 | 2.420372 | GGAAGAGACCGGCTGAATTTTC | 59.580 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
358 | 359 | 2.859165 | AGAGACCGGCTGAATTTTCA | 57.141 | 45.000 | 0.00 | 0.00 | 35.57 | 2.69 |
366 | 367 | 3.406682 | CTGAATTTTCAGCCGGTGC | 57.593 | 52.632 | 1.90 | 0.00 | 46.97 | 5.01 |
367 | 368 | 0.454957 | CTGAATTTTCAGCCGGTGCG | 60.455 | 55.000 | 1.90 | 0.00 | 46.97 | 5.34 |
368 | 369 | 1.801512 | GAATTTTCAGCCGGTGCGC | 60.802 | 57.895 | 1.90 | 0.00 | 44.33 | 6.09 |
369 | 370 | 3.281359 | AATTTTCAGCCGGTGCGCC | 62.281 | 57.895 | 6.11 | 6.11 | 44.33 | 6.53 |
379 | 380 | 2.126618 | GGTGCGCCGGCTTTAAAC | 60.127 | 61.111 | 26.68 | 14.40 | 40.82 | 2.01 |
380 | 381 | 2.501008 | GTGCGCCGGCTTTAAACG | 60.501 | 61.111 | 26.68 | 8.00 | 40.82 | 3.60 |
386 | 387 | 3.778969 | CCGGCTTTAAACGGTTTCC | 57.221 | 52.632 | 9.78 | 4.28 | 44.85 | 3.13 |
387 | 388 | 0.241749 | CCGGCTTTAAACGGTTTCCC | 59.758 | 55.000 | 9.78 | 6.02 | 44.85 | 3.97 |
388 | 389 | 1.241165 | CGGCTTTAAACGGTTTCCCT | 58.759 | 50.000 | 9.78 | 0.00 | 0.00 | 4.20 |
389 | 390 | 1.610038 | CGGCTTTAAACGGTTTCCCTT | 59.390 | 47.619 | 9.78 | 0.00 | 0.00 | 3.95 |
390 | 391 | 2.351060 | CGGCTTTAAACGGTTTCCCTTC | 60.351 | 50.000 | 9.78 | 0.00 | 0.00 | 3.46 |
391 | 392 | 2.889045 | GGCTTTAAACGGTTTCCCTTCT | 59.111 | 45.455 | 9.78 | 0.00 | 0.00 | 2.85 |
392 | 393 | 4.074259 | GGCTTTAAACGGTTTCCCTTCTA | 58.926 | 43.478 | 9.78 | 0.00 | 0.00 | 2.10 |
393 | 394 | 4.083110 | GGCTTTAAACGGTTTCCCTTCTAC | 60.083 | 45.833 | 9.78 | 0.00 | 0.00 | 2.59 |
394 | 395 | 4.083110 | GCTTTAAACGGTTTCCCTTCTACC | 60.083 | 45.833 | 9.78 | 0.00 | 0.00 | 3.18 |
395 | 396 | 4.980339 | TTAAACGGTTTCCCTTCTACCT | 57.020 | 40.909 | 9.78 | 0.00 | 0.00 | 3.08 |
396 | 397 | 3.413846 | AAACGGTTTCCCTTCTACCTC | 57.586 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
397 | 398 | 2.322339 | ACGGTTTCCCTTCTACCTCT | 57.678 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
398 | 399 | 3.463048 | ACGGTTTCCCTTCTACCTCTA | 57.537 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
399 | 400 | 3.363627 | ACGGTTTCCCTTCTACCTCTAG | 58.636 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
400 | 401 | 2.101082 | CGGTTTCCCTTCTACCTCTAGC | 59.899 | 54.545 | 0.00 | 0.00 | 0.00 | 3.42 |
401 | 402 | 3.105283 | GGTTTCCCTTCTACCTCTAGCA | 58.895 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
402 | 403 | 3.118702 | GGTTTCCCTTCTACCTCTAGCAC | 60.119 | 52.174 | 0.00 | 0.00 | 0.00 | 4.40 |
403 | 404 | 3.759815 | TTCCCTTCTACCTCTAGCACT | 57.240 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
404 | 405 | 3.759815 | TCCCTTCTACCTCTAGCACTT | 57.240 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
405 | 406 | 3.366396 | TCCCTTCTACCTCTAGCACTTG | 58.634 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
406 | 407 | 2.159028 | CCCTTCTACCTCTAGCACTTGC | 60.159 | 54.545 | 0.00 | 0.00 | 42.49 | 4.01 |
407 | 408 | 2.497675 | CCTTCTACCTCTAGCACTTGCA | 59.502 | 50.000 | 3.62 | 0.00 | 45.16 | 4.08 |
408 | 409 | 3.133721 | CCTTCTACCTCTAGCACTTGCAT | 59.866 | 47.826 | 3.62 | 0.00 | 45.16 | 3.96 |
409 | 410 | 3.808466 | TCTACCTCTAGCACTTGCATG | 57.192 | 47.619 | 3.62 | 0.00 | 45.16 | 4.06 |
410 | 411 | 3.099905 | TCTACCTCTAGCACTTGCATGT | 58.900 | 45.455 | 3.62 | 0.00 | 45.16 | 3.21 |
411 | 412 | 2.867109 | ACCTCTAGCACTTGCATGTT | 57.133 | 45.000 | 1.83 | 0.00 | 45.16 | 2.71 |
412 | 413 | 3.146104 | ACCTCTAGCACTTGCATGTTT | 57.854 | 42.857 | 1.83 | 0.00 | 45.16 | 2.83 |
413 | 414 | 3.490348 | ACCTCTAGCACTTGCATGTTTT | 58.510 | 40.909 | 1.83 | 0.00 | 45.16 | 2.43 |
414 | 415 | 3.503748 | ACCTCTAGCACTTGCATGTTTTC | 59.496 | 43.478 | 1.83 | 0.00 | 45.16 | 2.29 |
415 | 416 | 3.755378 | CCTCTAGCACTTGCATGTTTTCT | 59.245 | 43.478 | 1.83 | 3.76 | 45.16 | 2.52 |
416 | 417 | 4.142730 | CCTCTAGCACTTGCATGTTTTCTC | 60.143 | 45.833 | 1.83 | 0.00 | 45.16 | 2.87 |
417 | 418 | 2.693797 | AGCACTTGCATGTTTTCTCG | 57.306 | 45.000 | 1.83 | 0.00 | 45.16 | 4.04 |
418 | 419 | 2.221169 | AGCACTTGCATGTTTTCTCGA | 58.779 | 42.857 | 1.83 | 0.00 | 45.16 | 4.04 |
419 | 420 | 2.225019 | AGCACTTGCATGTTTTCTCGAG | 59.775 | 45.455 | 5.93 | 5.93 | 45.16 | 4.04 |
420 | 421 | 2.224079 | GCACTTGCATGTTTTCTCGAGA | 59.776 | 45.455 | 12.08 | 12.08 | 41.59 | 4.04 |
421 | 422 | 3.666374 | GCACTTGCATGTTTTCTCGAGAG | 60.666 | 47.826 | 15.94 | 3.92 | 41.59 | 3.20 |
422 | 423 | 3.742882 | CACTTGCATGTTTTCTCGAGAGA | 59.257 | 43.478 | 15.94 | 8.62 | 39.12 | 3.10 |
423 | 424 | 4.212004 | CACTTGCATGTTTTCTCGAGAGAA | 59.788 | 41.667 | 15.94 | 14.90 | 44.94 | 2.87 |
424 | 425 | 4.999950 | ACTTGCATGTTTTCTCGAGAGAAT | 59.000 | 37.500 | 20.01 | 8.23 | 45.78 | 2.40 |
425 | 426 | 5.121454 | ACTTGCATGTTTTCTCGAGAGAATC | 59.879 | 40.000 | 20.01 | 14.08 | 45.78 | 2.52 |
426 | 427 | 3.935203 | TGCATGTTTTCTCGAGAGAATCC | 59.065 | 43.478 | 20.01 | 9.91 | 45.78 | 3.01 |
427 | 428 | 4.187694 | GCATGTTTTCTCGAGAGAATCCT | 58.812 | 43.478 | 20.01 | 6.72 | 45.78 | 3.24 |
428 | 429 | 4.633565 | GCATGTTTTCTCGAGAGAATCCTT | 59.366 | 41.667 | 20.01 | 5.51 | 45.78 | 3.36 |
429 | 430 | 5.447010 | GCATGTTTTCTCGAGAGAATCCTTG | 60.447 | 44.000 | 20.01 | 15.99 | 45.78 | 3.61 |
430 | 431 | 5.468540 | TGTTTTCTCGAGAGAATCCTTGA | 57.531 | 39.130 | 20.01 | 0.00 | 45.78 | 3.02 |
431 | 432 | 5.473931 | TGTTTTCTCGAGAGAATCCTTGAG | 58.526 | 41.667 | 20.01 | 8.72 | 45.78 | 3.02 |
432 | 433 | 3.791973 | TTCTCGAGAGAATCCTTGAGC | 57.208 | 47.619 | 15.94 | 0.00 | 42.06 | 4.26 |
433 | 434 | 3.011566 | TCTCGAGAGAATCCTTGAGCT | 57.988 | 47.619 | 12.08 | 0.00 | 42.04 | 4.09 |
434 | 435 | 2.687425 | TCTCGAGAGAATCCTTGAGCTG | 59.313 | 50.000 | 12.08 | 0.00 | 42.04 | 4.24 |
435 | 436 | 2.687425 | CTCGAGAGAATCCTTGAGCTGA | 59.313 | 50.000 | 6.58 | 0.00 | 41.32 | 4.26 |
436 | 437 | 2.687425 | TCGAGAGAATCCTTGAGCTGAG | 59.313 | 50.000 | 0.00 | 0.00 | 37.03 | 3.35 |
437 | 438 | 2.687425 | CGAGAGAATCCTTGAGCTGAGA | 59.313 | 50.000 | 0.00 | 0.00 | 33.66 | 3.27 |
438 | 439 | 3.243168 | CGAGAGAATCCTTGAGCTGAGAG | 60.243 | 52.174 | 0.00 | 0.00 | 33.66 | 3.20 |
439 | 440 | 3.953612 | GAGAGAATCCTTGAGCTGAGAGA | 59.046 | 47.826 | 0.00 | 0.00 | 33.66 | 3.10 |
440 | 441 | 3.956199 | AGAGAATCCTTGAGCTGAGAGAG | 59.044 | 47.826 | 0.00 | 0.00 | 33.66 | 3.20 |
441 | 442 | 3.701040 | GAGAATCCTTGAGCTGAGAGAGT | 59.299 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
442 | 443 | 4.095946 | AGAATCCTTGAGCTGAGAGAGTT | 58.904 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
443 | 444 | 3.891422 | ATCCTTGAGCTGAGAGAGTTG | 57.109 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
444 | 445 | 1.274728 | TCCTTGAGCTGAGAGAGTTGC | 59.725 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
445 | 446 | 1.001746 | CCTTGAGCTGAGAGAGTTGCA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 4.08 |
446 | 447 | 2.549563 | CCTTGAGCTGAGAGAGTTGCAA | 60.550 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
447 | 448 | 2.452295 | TGAGCTGAGAGAGTTGCAAG | 57.548 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
448 | 449 | 1.001746 | TGAGCTGAGAGAGTTGCAAGG | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
449 | 450 | 1.001860 | GAGCTGAGAGAGTTGCAAGGT | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.50 |
450 | 451 | 2.232452 | GAGCTGAGAGAGTTGCAAGGTA | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
451 | 452 | 2.233431 | AGCTGAGAGAGTTGCAAGGTAG | 59.767 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
452 | 453 | 2.232452 | GCTGAGAGAGTTGCAAGGTAGA | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
453 | 454 | 3.675775 | GCTGAGAGAGTTGCAAGGTAGAG | 60.676 | 52.174 | 0.00 | 0.00 | 0.00 | 2.43 |
454 | 455 | 3.761218 | CTGAGAGAGTTGCAAGGTAGAGA | 59.239 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
455 | 456 | 4.152647 | TGAGAGAGTTGCAAGGTAGAGAA | 58.847 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
456 | 457 | 4.219507 | TGAGAGAGTTGCAAGGTAGAGAAG | 59.780 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
457 | 458 | 4.411927 | AGAGAGTTGCAAGGTAGAGAAGA | 58.588 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
458 | 459 | 4.835615 | AGAGAGTTGCAAGGTAGAGAAGAA | 59.164 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
459 | 460 | 5.047377 | AGAGAGTTGCAAGGTAGAGAAGAAG | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 2.85 |
460 | 461 | 4.835615 | AGAGTTGCAAGGTAGAGAAGAAGA | 59.164 | 41.667 | 0.00 | 0.00 | 0.00 | 2.87 |
461 | 462 | 5.305644 | AGAGTTGCAAGGTAGAGAAGAAGAA | 59.694 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
462 | 463 | 5.546526 | AGTTGCAAGGTAGAGAAGAAGAAG | 58.453 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
463 | 464 | 3.931578 | TGCAAGGTAGAGAAGAAGAAGC | 58.068 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
464 | 465 | 3.324846 | TGCAAGGTAGAGAAGAAGAAGCA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
465 | 466 | 3.932089 | GCAAGGTAGAGAAGAAGAAGCAG | 59.068 | 47.826 | 0.00 | 0.00 | 0.00 | 4.24 |
466 | 467 | 3.885724 | AGGTAGAGAAGAAGAAGCAGC | 57.114 | 47.619 | 0.00 | 0.00 | 0.00 | 5.25 |
467 | 468 | 2.165437 | AGGTAGAGAAGAAGAAGCAGCG | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
468 | 469 | 1.923864 | GTAGAGAAGAAGAAGCAGCGC | 59.076 | 52.381 | 0.00 | 0.00 | 0.00 | 5.92 |
469 | 470 | 0.607620 | AGAGAAGAAGAAGCAGCGCT | 59.392 | 50.000 | 2.64 | 2.64 | 42.56 | 5.92 |
470 | 471 | 0.720590 | GAGAAGAAGAAGCAGCGCTG | 59.279 | 55.000 | 32.83 | 32.83 | 39.62 | 5.18 |
806 | 857 | 3.208592 | TCCCCCTGTCCTCCCAGT | 61.209 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
1016 | 1074 | 3.182967 | CAGAGATGTTTACTGTCGGAGC | 58.817 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1270 | 1334 | 1.228894 | AACGAGCTCCCTGACCTGA | 60.229 | 57.895 | 8.47 | 0.00 | 0.00 | 3.86 |
1656 | 2204 | 4.135153 | CTCCCGACGTGGCTGGAG | 62.135 | 72.222 | 8.13 | 8.13 | 38.56 | 3.86 |
1778 | 2329 | 8.830201 | TCCATTGGACACATTTCATTTTAAAG | 57.170 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
1835 | 2391 | 2.570752 | CTCATGTAGGATCCTCCCCATG | 59.429 | 54.545 | 27.50 | 27.50 | 42.84 | 3.66 |
1839 | 2395 | 0.268869 | TAGGATCCTCCCCATGCACT | 59.731 | 55.000 | 20.22 | 0.00 | 37.19 | 4.40 |
1870 | 2426 | 5.574948 | GCTAGAATTTAGGAAAAGTGGGGGA | 60.575 | 44.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1967 | 2532 | 2.564947 | AGCGCAGATAGGAAGAATAGGG | 59.435 | 50.000 | 11.47 | 0.00 | 0.00 | 3.53 |
2051 | 2616 | 6.127338 | GGTTCTGCTGCCCTTTAAATCTAATT | 60.127 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
2087 | 2652 | 5.646360 | CCTCTTATCCTAGTAGCAGCTACTC | 59.354 | 48.000 | 33.94 | 10.03 | 42.87 | 2.59 |
2088 | 2653 | 5.562635 | TCTTATCCTAGTAGCAGCTACTCC | 58.437 | 45.833 | 33.94 | 9.29 | 42.87 | 3.85 |
2089 | 2654 | 2.660670 | TCCTAGTAGCAGCTACTCCC | 57.339 | 55.000 | 33.94 | 8.92 | 42.87 | 4.30 |
2090 | 2655 | 2.136863 | TCCTAGTAGCAGCTACTCCCT | 58.863 | 52.381 | 33.94 | 16.36 | 42.87 | 4.20 |
2091 | 2656 | 3.324689 | TCCTAGTAGCAGCTACTCCCTA | 58.675 | 50.000 | 33.94 | 18.33 | 42.87 | 3.53 |
2092 | 2657 | 3.072768 | TCCTAGTAGCAGCTACTCCCTAC | 59.927 | 52.174 | 33.94 | 9.67 | 42.87 | 3.18 |
2093 | 2658 | 3.073356 | CCTAGTAGCAGCTACTCCCTACT | 59.927 | 52.174 | 33.94 | 16.43 | 42.87 | 2.57 |
2094 | 2659 | 4.286549 | CCTAGTAGCAGCTACTCCCTACTA | 59.713 | 50.000 | 33.94 | 16.66 | 42.87 | 1.82 |
2095 | 2660 | 4.792513 | AGTAGCAGCTACTCCCTACTAA | 57.207 | 45.455 | 26.87 | 0.00 | 42.87 | 2.24 |
2096 | 2661 | 5.126699 | AGTAGCAGCTACTCCCTACTAAA | 57.873 | 43.478 | 26.87 | 0.00 | 42.87 | 1.85 |
2097 | 2662 | 5.707495 | AGTAGCAGCTACTCCCTACTAAAT | 58.293 | 41.667 | 26.87 | 3.20 | 42.87 | 1.40 |
2098 | 2663 | 5.771165 | AGTAGCAGCTACTCCCTACTAAATC | 59.229 | 44.000 | 26.87 | 0.00 | 42.87 | 2.17 |
2099 | 2664 | 4.547671 | AGCAGCTACTCCCTACTAAATCA | 58.452 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2100 | 2665 | 4.586841 | AGCAGCTACTCCCTACTAAATCAG | 59.413 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
2101 | 2666 | 4.797933 | GCAGCTACTCCCTACTAAATCAGC | 60.798 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2102 | 2667 | 3.570550 | AGCTACTCCCTACTAAATCAGCG | 59.429 | 47.826 | 0.00 | 0.00 | 0.00 | 5.18 |
2103 | 2668 | 3.568853 | GCTACTCCCTACTAAATCAGCGA | 59.431 | 47.826 | 0.00 | 0.00 | 0.00 | 4.93 |
2104 | 2669 | 4.557097 | GCTACTCCCTACTAAATCAGCGAC | 60.557 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2105 | 2670 | 3.362706 | ACTCCCTACTAAATCAGCGACA | 58.637 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
2106 | 2671 | 3.767673 | ACTCCCTACTAAATCAGCGACAA | 59.232 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
2107 | 2672 | 4.142138 | ACTCCCTACTAAATCAGCGACAAG | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
2108 | 2673 | 3.767673 | TCCCTACTAAATCAGCGACAAGT | 59.232 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
2109 | 2674 | 4.951715 | TCCCTACTAAATCAGCGACAAGTA | 59.048 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2110 | 2675 | 5.419788 | TCCCTACTAAATCAGCGACAAGTAA | 59.580 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2111 | 2676 | 6.097839 | TCCCTACTAAATCAGCGACAAGTAAT | 59.902 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
2112 | 2677 | 7.286087 | TCCCTACTAAATCAGCGACAAGTAATA | 59.714 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
2113 | 2678 | 8.088981 | CCCTACTAAATCAGCGACAAGTAATAT | 58.911 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
2114 | 2679 | 8.916654 | CCTACTAAATCAGCGACAAGTAATATG | 58.083 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
2115 | 2680 | 7.715265 | ACTAAATCAGCGACAAGTAATATGG | 57.285 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2116 | 2681 | 7.497595 | ACTAAATCAGCGACAAGTAATATGGA | 58.502 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2117 | 2682 | 7.985184 | ACTAAATCAGCGACAAGTAATATGGAA | 59.015 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
2118 | 2683 | 6.604735 | AATCAGCGACAAGTAATATGGAAC | 57.395 | 37.500 | 0.00 | 0.00 | 0.00 | 3.62 |
2119 | 2684 | 4.109766 | TCAGCGACAAGTAATATGGAACG | 58.890 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
2120 | 2685 | 3.245284 | CAGCGACAAGTAATATGGAACGG | 59.755 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
2121 | 2686 | 3.131577 | AGCGACAAGTAATATGGAACGGA | 59.868 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
2122 | 2687 | 3.489785 | GCGACAAGTAATATGGAACGGAG | 59.510 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
2123 | 2688 | 4.049186 | CGACAAGTAATATGGAACGGAGG | 58.951 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2124 | 2689 | 4.377897 | GACAAGTAATATGGAACGGAGGG | 58.622 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2125 | 2690 | 4.035112 | ACAAGTAATATGGAACGGAGGGA | 58.965 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
2126 | 2691 | 4.101119 | ACAAGTAATATGGAACGGAGGGAG | 59.899 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
2127 | 2692 | 3.924922 | AGTAATATGGAACGGAGGGAGT | 58.075 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2162 | 2735 | 7.104290 | GGCCCTTGTGACTACCTATTATTATC | 58.896 | 42.308 | 0.00 | 0.00 | 0.00 | 1.75 |
2189 | 2762 | 9.350951 | ACTTTTGTTGCCTTTATATATACTCCC | 57.649 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
2190 | 2763 | 9.574516 | CTTTTGTTGCCTTTATATATACTCCCT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
2191 | 2764 | 9.569122 | TTTTGTTGCCTTTATATATACTCCCTC | 57.431 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
2192 | 2765 | 7.253905 | TGTTGCCTTTATATATACTCCCTCC | 57.746 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2193 | 2766 | 6.070995 | TGTTGCCTTTATATATACTCCCTCCG | 60.071 | 42.308 | 0.00 | 0.00 | 0.00 | 4.63 |
2194 | 2767 | 5.586877 | TGCCTTTATATATACTCCCTCCGT | 58.413 | 41.667 | 0.00 | 0.00 | 0.00 | 4.69 |
2195 | 2768 | 5.655532 | TGCCTTTATATATACTCCCTCCGTC | 59.344 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2196 | 2769 | 5.068855 | GCCTTTATATATACTCCCTCCGTCC | 59.931 | 48.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2197 | 2770 | 5.597594 | CCTTTATATATACTCCCTCCGTCCC | 59.402 | 48.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2198 | 2771 | 5.801720 | TTATATATACTCCCTCCGTCCCA | 57.198 | 43.478 | 0.00 | 0.00 | 0.00 | 4.37 |
2199 | 2772 | 4.687262 | ATATATACTCCCTCCGTCCCAA | 57.313 | 45.455 | 0.00 | 0.00 | 0.00 | 4.12 |
2200 | 2773 | 2.852714 | TATACTCCCTCCGTCCCAAA | 57.147 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2201 | 2774 | 1.961133 | ATACTCCCTCCGTCCCAAAA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2202 | 2775 | 1.961133 | TACTCCCTCCGTCCCAAAAT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2203 | 2776 | 1.961133 | ACTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2204 | 2777 | 2.271777 | ACTCCCTCCGTCCCAAAATAA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
2205 | 2778 | 2.238898 | ACTCCCTCCGTCCCAAAATAAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2206 | 2779 | 2.238898 | CTCCCTCCGTCCCAAAATAAGT | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2207 | 2780 | 2.645797 | TCCCTCCGTCCCAAAATAAGTT | 59.354 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
2208 | 2781 | 2.752903 | CCCTCCGTCCCAAAATAAGTTG | 59.247 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2209 | 2782 | 2.163613 | CCTCCGTCCCAAAATAAGTTGC | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2210 | 2783 | 2.163613 | CTCCGTCCCAAAATAAGTTGCC | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2211 | 2784 | 2.167662 | CCGTCCCAAAATAAGTTGCCT | 58.832 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
2212 | 2785 | 2.560981 | CCGTCCCAAAATAAGTTGCCTT | 59.439 | 45.455 | 0.00 | 0.00 | 34.56 | 4.35 |
2213 | 2786 | 3.006430 | CCGTCCCAAAATAAGTTGCCTTT | 59.994 | 43.478 | 0.00 | 0.00 | 31.89 | 3.11 |
2214 | 2787 | 4.218852 | CCGTCCCAAAATAAGTTGCCTTTA | 59.781 | 41.667 | 0.00 | 0.00 | 31.89 | 1.85 |
2215 | 2788 | 5.105513 | CCGTCCCAAAATAAGTTGCCTTTAT | 60.106 | 40.000 | 0.00 | 0.00 | 31.89 | 1.40 |
2248 | 2821 | 6.427853 | CCTATCATCTTTGTGTTGAGTTGTGA | 59.572 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
2282 | 2855 | 3.003793 | TCCTCTGCTCAGTATCGAAATCG | 59.996 | 47.826 | 0.00 | 0.00 | 41.45 | 3.34 |
2345 | 2922 | 1.457346 | CTTCCTCTCATGCACAACCC | 58.543 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
2371 | 2948 | 2.365293 | GTGTCTCCCCAAAAATTGCTGT | 59.635 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
2383 | 2960 | 0.036732 | ATTGCTGTTGGGAGCTCGAA | 59.963 | 50.000 | 7.83 | 0.00 | 39.90 | 3.71 |
2386 | 2963 | 1.674057 | CTGTTGGGAGCTCGAAGGT | 59.326 | 57.895 | 7.83 | 0.00 | 0.00 | 3.50 |
2422 | 2999 | 2.912956 | ACCTTCCCTCTCAATGCTGTTA | 59.087 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
2423 | 3000 | 3.525199 | ACCTTCCCTCTCAATGCTGTTAT | 59.475 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
2567 | 3157 | 1.407437 | GGGCAGACTAGGGAACATGTG | 60.407 | 57.143 | 0.00 | 0.00 | 0.00 | 3.21 |
2867 | 3460 | 8.756864 | GCTAATCTTTCTTATGGTACTTTCTCG | 58.243 | 37.037 | 0.00 | 0.00 | 0.00 | 4.04 |
2940 | 3533 | 9.737427 | TGTCGTGATTTTAGCTTATTTTGAAAA | 57.263 | 25.926 | 0.00 | 0.00 | 0.00 | 2.29 |
3166 | 3770 | 7.710907 | GCTACTGTTGAAGTATATGTGGATTGA | 59.289 | 37.037 | 0.00 | 0.00 | 40.65 | 2.57 |
3302 | 3908 | 6.695656 | GCCCCCATTAGTCCCTAAAATAATCA | 60.696 | 42.308 | 0.00 | 0.00 | 29.35 | 2.57 |
3311 | 3917 | 4.942483 | TCCCTAAAATAATCAAACCGCGAA | 59.058 | 37.500 | 8.23 | 0.00 | 0.00 | 4.70 |
3419 | 4026 | 1.002502 | GCTTTAGTCCCGGTTGGCT | 60.003 | 57.895 | 0.00 | 0.00 | 0.00 | 4.75 |
3624 | 4239 | 2.117423 | CCCCTGGACCGCCTTTTT | 59.883 | 61.111 | 0.00 | 0.00 | 34.31 | 1.94 |
3664 | 4279 | 9.005777 | CCAAAAGAAAATGATGGAAATGTCAAT | 57.994 | 29.630 | 0.00 | 0.00 | 32.82 | 2.57 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
63 | 64 | 3.506059 | CTCCTATCCAGCCGCACCG | 62.506 | 68.421 | 0.00 | 0.00 | 0.00 | 4.94 |
64 | 65 | 2.423446 | CTCCTATCCAGCCGCACC | 59.577 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
65 | 66 | 2.280457 | GCTCCTATCCAGCCGCAC | 60.280 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
66 | 67 | 3.916544 | CGCTCCTATCCAGCCGCA | 61.917 | 66.667 | 0.00 | 0.00 | 32.83 | 5.69 |
67 | 68 | 3.917760 | ACGCTCCTATCCAGCCGC | 61.918 | 66.667 | 0.00 | 0.00 | 32.83 | 6.53 |
68 | 69 | 2.028190 | CACGCTCCTATCCAGCCG | 59.972 | 66.667 | 0.00 | 0.00 | 32.83 | 5.52 |
69 | 70 | 1.068250 | GTCACGCTCCTATCCAGCC | 59.932 | 63.158 | 0.00 | 0.00 | 32.83 | 4.85 |
70 | 71 | 1.299468 | CGTCACGCTCCTATCCAGC | 60.299 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
71 | 72 | 0.955178 | ATCGTCACGCTCCTATCCAG | 59.045 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
72 | 73 | 0.668535 | CATCGTCACGCTCCTATCCA | 59.331 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
73 | 74 | 0.952280 | TCATCGTCACGCTCCTATCC | 59.048 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
74 | 75 | 1.604755 | AGTCATCGTCACGCTCCTATC | 59.395 | 52.381 | 0.00 | 0.00 | 0.00 | 2.08 |
75 | 76 | 1.681538 | AGTCATCGTCACGCTCCTAT | 58.318 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
76 | 77 | 1.938577 | GTAGTCATCGTCACGCTCCTA | 59.061 | 52.381 | 0.00 | 0.00 | 0.00 | 2.94 |
77 | 78 | 0.733729 | GTAGTCATCGTCACGCTCCT | 59.266 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
78 | 79 | 0.248539 | GGTAGTCATCGTCACGCTCC | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
79 | 80 | 0.733729 | AGGTAGTCATCGTCACGCTC | 59.266 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
80 | 81 | 0.733729 | GAGGTAGTCATCGTCACGCT | 59.266 | 55.000 | 0.00 | 0.00 | 0.00 | 5.07 |
81 | 82 | 0.589229 | CGAGGTAGTCATCGTCACGC | 60.589 | 60.000 | 0.00 | 0.00 | 41.88 | 5.34 |
82 | 83 | 3.511012 | CGAGGTAGTCATCGTCACG | 57.489 | 57.895 | 0.00 | 0.00 | 41.88 | 4.35 |
88 | 89 | 2.027751 | GCCGGCGAGGTAGTCATC | 59.972 | 66.667 | 12.58 | 0.00 | 43.70 | 2.92 |
89 | 90 | 3.900892 | CGCCGGCGAGGTAGTCAT | 61.901 | 66.667 | 44.86 | 0.00 | 43.70 | 3.06 |
99 | 100 | 3.342627 | TCTTGTTCAACGCCGGCG | 61.343 | 61.111 | 44.88 | 44.88 | 46.03 | 6.46 |
100 | 101 | 2.251371 | GTCTTGTTCAACGCCGGC | 59.749 | 61.111 | 19.07 | 19.07 | 0.00 | 6.13 |
101 | 102 | 1.278637 | GTGTCTTGTTCAACGCCGG | 59.721 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
102 | 103 | 1.083657 | CGTGTCTTGTTCAACGCCG | 60.084 | 57.895 | 0.00 | 0.00 | 0.00 | 6.46 |
103 | 104 | 1.278637 | CCGTGTCTTGTTCAACGCC | 59.721 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
104 | 105 | 0.315869 | CACCGTGTCTTGTTCAACGC | 60.316 | 55.000 | 0.00 | 0.00 | 0.00 | 4.84 |
105 | 106 | 0.303493 | CCACCGTGTCTTGTTCAACG | 59.697 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
106 | 107 | 0.028902 | GCCACCGTGTCTTGTTCAAC | 59.971 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
107 | 108 | 0.393132 | TGCCACCGTGTCTTGTTCAA | 60.393 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
108 | 109 | 1.092921 | GTGCCACCGTGTCTTGTTCA | 61.093 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
109 | 110 | 1.092921 | TGTGCCACCGTGTCTTGTTC | 61.093 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
110 | 111 | 1.078072 | TGTGCCACCGTGTCTTGTT | 60.078 | 52.632 | 0.00 | 0.00 | 0.00 | 2.83 |
111 | 112 | 1.523711 | CTGTGCCACCGTGTCTTGT | 60.524 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
112 | 113 | 0.249699 | TACTGTGCCACCGTGTCTTG | 60.250 | 55.000 | 1.83 | 0.00 | 0.00 | 3.02 |
113 | 114 | 0.033504 | CTACTGTGCCACCGTGTCTT | 59.966 | 55.000 | 1.83 | 0.00 | 0.00 | 3.01 |
114 | 115 | 1.113517 | ACTACTGTGCCACCGTGTCT | 61.114 | 55.000 | 1.83 | 0.00 | 0.00 | 3.41 |
115 | 116 | 0.944311 | CACTACTGTGCCACCGTGTC | 60.944 | 60.000 | 1.83 | 0.00 | 37.38 | 3.67 |
116 | 117 | 1.069090 | CACTACTGTGCCACCGTGT | 59.931 | 57.895 | 1.83 | 0.00 | 37.38 | 4.49 |
117 | 118 | 1.667830 | CCACTACTGTGCCACCGTG | 60.668 | 63.158 | 1.83 | 0.15 | 42.54 | 4.94 |
118 | 119 | 2.741092 | CCACTACTGTGCCACCGT | 59.259 | 61.111 | 0.00 | 0.00 | 42.54 | 4.83 |
119 | 120 | 2.742372 | GCCACTACTGTGCCACCG | 60.742 | 66.667 | 0.00 | 0.00 | 42.54 | 4.94 |
120 | 121 | 1.002134 | ATGCCACTACTGTGCCACC | 60.002 | 57.895 | 0.00 | 0.00 | 42.54 | 4.61 |
121 | 122 | 1.308069 | CCATGCCACTACTGTGCCAC | 61.308 | 60.000 | 0.00 | 0.00 | 42.54 | 5.01 |
122 | 123 | 1.002257 | CCATGCCACTACTGTGCCA | 60.002 | 57.895 | 0.00 | 0.00 | 42.54 | 4.92 |
123 | 124 | 2.409870 | GCCATGCCACTACTGTGCC | 61.410 | 63.158 | 0.00 | 0.00 | 42.54 | 5.01 |
124 | 125 | 0.962356 | AAGCCATGCCACTACTGTGC | 60.962 | 55.000 | 0.00 | 0.00 | 42.54 | 4.57 |
125 | 126 | 1.089920 | GAAGCCATGCCACTACTGTG | 58.910 | 55.000 | 0.00 | 0.00 | 43.45 | 3.66 |
126 | 127 | 0.035056 | GGAAGCCATGCCACTACTGT | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
127 | 128 | 1.091771 | CGGAAGCCATGCCACTACTG | 61.092 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
128 | 129 | 1.221840 | CGGAAGCCATGCCACTACT | 59.778 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
129 | 130 | 0.177141 | TACGGAAGCCATGCCACTAC | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
130 | 131 | 0.464036 | CTACGGAAGCCATGCCACTA | 59.536 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
131 | 132 | 1.221840 | CTACGGAAGCCATGCCACT | 59.778 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
132 | 133 | 2.472909 | GCTACGGAAGCCATGCCAC | 61.473 | 63.158 | 0.79 | 0.00 | 46.25 | 5.01 |
133 | 134 | 2.124736 | GCTACGGAAGCCATGCCA | 60.125 | 61.111 | 0.79 | 0.00 | 46.25 | 4.92 |
145 | 146 | 3.982372 | TTTCTGCTCGCCGGCTACG | 62.982 | 63.158 | 26.68 | 13.45 | 40.55 | 3.51 |
146 | 147 | 2.125673 | TTTCTGCTCGCCGGCTAC | 60.126 | 61.111 | 26.68 | 14.14 | 0.00 | 3.58 |
147 | 148 | 2.184322 | CTTTCTGCTCGCCGGCTA | 59.816 | 61.111 | 26.68 | 13.77 | 0.00 | 3.93 |
148 | 149 | 4.767255 | CCTTTCTGCTCGCCGGCT | 62.767 | 66.667 | 26.68 | 0.00 | 0.00 | 5.52 |
149 | 150 | 4.760047 | TCCTTTCTGCTCGCCGGC | 62.760 | 66.667 | 19.07 | 19.07 | 0.00 | 6.13 |
150 | 151 | 2.507110 | TTCTCCTTTCTGCTCGCCGG | 62.507 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
151 | 152 | 1.079819 | TTCTCCTTTCTGCTCGCCG | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 6.46 |
152 | 153 | 0.247736 | TCTTCTCCTTTCTGCTCGCC | 59.752 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
153 | 154 | 2.086054 | TTCTTCTCCTTTCTGCTCGC | 57.914 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
154 | 155 | 5.255710 | TCTATTCTTCTCCTTTCTGCTCG | 57.744 | 43.478 | 0.00 | 0.00 | 0.00 | 5.03 |
155 | 156 | 6.815089 | TCATCTATTCTTCTCCTTTCTGCTC | 58.185 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
156 | 157 | 6.610830 | TCTCATCTATTCTTCTCCTTTCTGCT | 59.389 | 38.462 | 0.00 | 0.00 | 0.00 | 4.24 |
157 | 158 | 6.815089 | TCTCATCTATTCTTCTCCTTTCTGC | 58.185 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
158 | 159 | 8.863086 | AGATCTCATCTATTCTTCTCCTTTCTG | 58.137 | 37.037 | 0.00 | 0.00 | 38.00 | 3.02 |
159 | 160 | 9.082313 | GAGATCTCATCTATTCTTCTCCTTTCT | 57.918 | 37.037 | 18.11 | 0.00 | 40.38 | 2.52 |
160 | 161 | 8.023128 | CGAGATCTCATCTATTCTTCTCCTTTC | 58.977 | 40.741 | 22.31 | 0.00 | 40.38 | 2.62 |
161 | 162 | 7.523709 | GCGAGATCTCATCTATTCTTCTCCTTT | 60.524 | 40.741 | 22.31 | 0.00 | 40.38 | 3.11 |
162 | 163 | 6.071952 | GCGAGATCTCATCTATTCTTCTCCTT | 60.072 | 42.308 | 22.31 | 0.00 | 40.38 | 3.36 |
163 | 164 | 5.415701 | GCGAGATCTCATCTATTCTTCTCCT | 59.584 | 44.000 | 22.31 | 0.00 | 40.38 | 3.69 |
164 | 165 | 5.415701 | AGCGAGATCTCATCTATTCTTCTCC | 59.584 | 44.000 | 22.31 | 0.00 | 40.38 | 3.71 |
165 | 166 | 6.500684 | AGCGAGATCTCATCTATTCTTCTC | 57.499 | 41.667 | 22.31 | 0.00 | 40.38 | 2.87 |
166 | 167 | 5.122239 | CGAGCGAGATCTCATCTATTCTTCT | 59.878 | 44.000 | 22.31 | 3.35 | 40.38 | 2.85 |
167 | 168 | 5.106712 | ACGAGCGAGATCTCATCTATTCTTC | 60.107 | 44.000 | 22.31 | 5.38 | 40.38 | 2.87 |
168 | 169 | 4.759693 | ACGAGCGAGATCTCATCTATTCTT | 59.240 | 41.667 | 22.31 | 1.86 | 40.38 | 2.52 |
169 | 170 | 4.323417 | ACGAGCGAGATCTCATCTATTCT | 58.677 | 43.478 | 22.31 | 6.95 | 40.38 | 2.40 |
170 | 171 | 4.678509 | ACGAGCGAGATCTCATCTATTC | 57.321 | 45.455 | 22.31 | 8.75 | 40.38 | 1.75 |
171 | 172 | 4.277174 | ACAACGAGCGAGATCTCATCTATT | 59.723 | 41.667 | 22.31 | 12.53 | 40.38 | 1.73 |
172 | 173 | 3.818210 | ACAACGAGCGAGATCTCATCTAT | 59.182 | 43.478 | 22.31 | 7.85 | 40.38 | 1.98 |
173 | 174 | 3.002759 | CACAACGAGCGAGATCTCATCTA | 59.997 | 47.826 | 22.31 | 0.00 | 40.38 | 1.98 |
174 | 175 | 2.020720 | ACAACGAGCGAGATCTCATCT | 58.979 | 47.619 | 22.31 | 17.18 | 43.70 | 2.90 |
175 | 176 | 2.115595 | CACAACGAGCGAGATCTCATC | 58.884 | 52.381 | 22.31 | 17.05 | 33.41 | 2.92 |
176 | 177 | 1.474478 | ACACAACGAGCGAGATCTCAT | 59.526 | 47.619 | 22.31 | 10.21 | 33.41 | 2.90 |
177 | 178 | 0.881796 | ACACAACGAGCGAGATCTCA | 59.118 | 50.000 | 22.31 | 0.00 | 33.41 | 3.27 |
178 | 179 | 1.263776 | CACACAACGAGCGAGATCTC | 58.736 | 55.000 | 13.05 | 13.05 | 0.00 | 2.75 |
179 | 180 | 0.598562 | ACACACAACGAGCGAGATCT | 59.401 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
180 | 181 | 0.710567 | CACACACAACGAGCGAGATC | 59.289 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
181 | 182 | 0.313987 | TCACACACAACGAGCGAGAT | 59.686 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
182 | 183 | 0.313987 | ATCACACACAACGAGCGAGA | 59.686 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
183 | 184 | 0.436150 | CATCACACACAACGAGCGAG | 59.564 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
184 | 185 | 0.943835 | CCATCACACACAACGAGCGA | 60.944 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
185 | 186 | 0.943835 | TCCATCACACACAACGAGCG | 60.944 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
186 | 187 | 1.195448 | CTTCCATCACACACAACGAGC | 59.805 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
187 | 188 | 2.476619 | GTCTTCCATCACACACAACGAG | 59.523 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
188 | 189 | 2.479837 | GTCTTCCATCACACACAACGA | 58.520 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
189 | 190 | 1.192312 | CGTCTTCCATCACACACAACG | 59.808 | 52.381 | 0.00 | 0.00 | 0.00 | 4.10 |
190 | 191 | 2.476619 | CTCGTCTTCCATCACACACAAC | 59.523 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
191 | 192 | 2.364002 | TCTCGTCTTCCATCACACACAA | 59.636 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
192 | 193 | 1.960689 | TCTCGTCTTCCATCACACACA | 59.039 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
193 | 194 | 2.724977 | TCTCGTCTTCCATCACACAC | 57.275 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
194 | 195 | 2.675032 | GCATCTCGTCTTCCATCACACA | 60.675 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
195 | 196 | 1.929836 | GCATCTCGTCTTCCATCACAC | 59.070 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
196 | 197 | 1.550072 | TGCATCTCGTCTTCCATCACA | 59.450 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
197 | 198 | 2.299993 | TGCATCTCGTCTTCCATCAC | 57.700 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
198 | 199 | 3.333029 | TTTGCATCTCGTCTTCCATCA | 57.667 | 42.857 | 0.00 | 0.00 | 0.00 | 3.07 |
199 | 200 | 3.873361 | TCATTTGCATCTCGTCTTCCATC | 59.127 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
200 | 201 | 3.875727 | CTCATTTGCATCTCGTCTTCCAT | 59.124 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
201 | 202 | 3.264947 | CTCATTTGCATCTCGTCTTCCA | 58.735 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
202 | 203 | 3.063180 | CACTCATTTGCATCTCGTCTTCC | 59.937 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
203 | 204 | 3.063180 | CCACTCATTTGCATCTCGTCTTC | 59.937 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
204 | 205 | 3.005554 | CCACTCATTTGCATCTCGTCTT | 58.994 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
205 | 206 | 2.027745 | ACCACTCATTTGCATCTCGTCT | 60.028 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
206 | 207 | 2.350522 | ACCACTCATTTGCATCTCGTC | 58.649 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
207 | 208 | 2.479566 | ACCACTCATTTGCATCTCGT | 57.520 | 45.000 | 0.00 | 0.00 | 0.00 | 4.18 |
208 | 209 | 2.485426 | ACAACCACTCATTTGCATCTCG | 59.515 | 45.455 | 0.00 | 0.00 | 0.00 | 4.04 |
209 | 210 | 5.449588 | CCATACAACCACTCATTTGCATCTC | 60.450 | 44.000 | 0.00 | 0.00 | 0.00 | 2.75 |
210 | 211 | 4.400251 | CCATACAACCACTCATTTGCATCT | 59.600 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
211 | 212 | 4.398988 | TCCATACAACCACTCATTTGCATC | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
212 | 213 | 4.343231 | TCCATACAACCACTCATTTGCAT | 58.657 | 39.130 | 0.00 | 0.00 | 0.00 | 3.96 |
213 | 214 | 3.758023 | CTCCATACAACCACTCATTTGCA | 59.242 | 43.478 | 0.00 | 0.00 | 0.00 | 4.08 |
214 | 215 | 3.428045 | GCTCCATACAACCACTCATTTGC | 60.428 | 47.826 | 0.00 | 0.00 | 0.00 | 3.68 |
215 | 216 | 4.012374 | AGCTCCATACAACCACTCATTTG | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
216 | 217 | 4.012374 | CAGCTCCATACAACCACTCATTT | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
217 | 218 | 3.009473 | ACAGCTCCATACAACCACTCATT | 59.991 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
218 | 219 | 2.573462 | ACAGCTCCATACAACCACTCAT | 59.427 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
219 | 220 | 1.977854 | ACAGCTCCATACAACCACTCA | 59.022 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
220 | 221 | 2.028112 | TCACAGCTCCATACAACCACTC | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
221 | 222 | 1.977854 | TCACAGCTCCATACAACCACT | 59.022 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
222 | 223 | 2.472695 | TCACAGCTCCATACAACCAC | 57.527 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
223 | 224 | 3.500448 | TTTCACAGCTCCATACAACCA | 57.500 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
224 | 225 | 4.072131 | TCTTTTCACAGCTCCATACAACC | 58.928 | 43.478 | 0.00 | 0.00 | 0.00 | 3.77 |
225 | 226 | 5.886960 | ATCTTTTCACAGCTCCATACAAC | 57.113 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
226 | 227 | 6.599244 | CCTTATCTTTTCACAGCTCCATACAA | 59.401 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
227 | 228 | 6.070251 | TCCTTATCTTTTCACAGCTCCATACA | 60.070 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
228 | 229 | 6.349300 | TCCTTATCTTTTCACAGCTCCATAC | 58.651 | 40.000 | 0.00 | 0.00 | 0.00 | 2.39 |
229 | 230 | 6.560003 | TCCTTATCTTTTCACAGCTCCATA | 57.440 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
230 | 231 | 5.441718 | TCCTTATCTTTTCACAGCTCCAT | 57.558 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
231 | 232 | 4.908601 | TCCTTATCTTTTCACAGCTCCA | 57.091 | 40.909 | 0.00 | 0.00 | 0.00 | 3.86 |
232 | 233 | 9.561069 | TTTATATCCTTATCTTTTCACAGCTCC | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 4.70 |
234 | 235 | 9.566432 | CCTTTATATCCTTATCTTTTCACAGCT | 57.434 | 33.333 | 0.00 | 0.00 | 0.00 | 4.24 |
235 | 236 | 9.561069 | TCCTTTATATCCTTATCTTTTCACAGC | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
239 | 240 | 9.982651 | CGTCTCCTTTATATCCTTATCTTTTCA | 57.017 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
240 | 241 | 9.984190 | ACGTCTCCTTTATATCCTTATCTTTTC | 57.016 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
241 | 242 | 9.765795 | CACGTCTCCTTTATATCCTTATCTTTT | 57.234 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
242 | 243 | 9.144298 | TCACGTCTCCTTTATATCCTTATCTTT | 57.856 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
243 | 244 | 8.707796 | TCACGTCTCCTTTATATCCTTATCTT | 57.292 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
244 | 245 | 8.707796 | TTCACGTCTCCTTTATATCCTTATCT | 57.292 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
245 | 246 | 9.930693 | AATTCACGTCTCCTTTATATCCTTATC | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
246 | 247 | 9.930693 | GAATTCACGTCTCCTTTATATCCTTAT | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
247 | 248 | 9.144298 | AGAATTCACGTCTCCTTTATATCCTTA | 57.856 | 33.333 | 8.44 | 0.00 | 0.00 | 2.69 |
248 | 249 | 8.024145 | AGAATTCACGTCTCCTTTATATCCTT | 57.976 | 34.615 | 8.44 | 0.00 | 0.00 | 3.36 |
249 | 250 | 7.604657 | AGAATTCACGTCTCCTTTATATCCT | 57.395 | 36.000 | 8.44 | 0.00 | 0.00 | 3.24 |
250 | 251 | 7.171678 | CCAAGAATTCACGTCTCCTTTATATCC | 59.828 | 40.741 | 8.44 | 0.00 | 0.00 | 2.59 |
251 | 252 | 7.711339 | ACCAAGAATTCACGTCTCCTTTATATC | 59.289 | 37.037 | 8.44 | 0.00 | 0.00 | 1.63 |
252 | 253 | 7.495934 | CACCAAGAATTCACGTCTCCTTTATAT | 59.504 | 37.037 | 8.44 | 0.00 | 0.00 | 0.86 |
253 | 254 | 6.816640 | CACCAAGAATTCACGTCTCCTTTATA | 59.183 | 38.462 | 8.44 | 0.00 | 0.00 | 0.98 |
254 | 255 | 5.643777 | CACCAAGAATTCACGTCTCCTTTAT | 59.356 | 40.000 | 8.44 | 0.00 | 0.00 | 1.40 |
255 | 256 | 4.994852 | CACCAAGAATTCACGTCTCCTTTA | 59.005 | 41.667 | 8.44 | 0.00 | 0.00 | 1.85 |
256 | 257 | 3.815401 | CACCAAGAATTCACGTCTCCTTT | 59.185 | 43.478 | 8.44 | 0.00 | 0.00 | 3.11 |
257 | 258 | 3.403038 | CACCAAGAATTCACGTCTCCTT | 58.597 | 45.455 | 8.44 | 0.00 | 0.00 | 3.36 |
258 | 259 | 2.289694 | CCACCAAGAATTCACGTCTCCT | 60.290 | 50.000 | 8.44 | 0.00 | 0.00 | 3.69 |
259 | 260 | 2.076863 | CCACCAAGAATTCACGTCTCC | 58.923 | 52.381 | 8.44 | 0.00 | 0.00 | 3.71 |
260 | 261 | 1.464997 | GCCACCAAGAATTCACGTCTC | 59.535 | 52.381 | 8.44 | 0.00 | 0.00 | 3.36 |
261 | 262 | 1.523758 | GCCACCAAGAATTCACGTCT | 58.476 | 50.000 | 8.44 | 0.00 | 0.00 | 4.18 |
262 | 263 | 0.521735 | GGCCACCAAGAATTCACGTC | 59.478 | 55.000 | 8.44 | 0.00 | 0.00 | 4.34 |
263 | 264 | 0.893727 | GGGCCACCAAGAATTCACGT | 60.894 | 55.000 | 4.39 | 0.00 | 36.50 | 4.49 |
264 | 265 | 1.595093 | GGGGCCACCAAGAATTCACG | 61.595 | 60.000 | 4.39 | 0.00 | 39.85 | 4.35 |
265 | 266 | 2.276869 | GGGGCCACCAAGAATTCAC | 58.723 | 57.895 | 4.39 | 0.00 | 39.85 | 3.18 |
266 | 267 | 4.863415 | GGGGCCACCAAGAATTCA | 57.137 | 55.556 | 4.39 | 0.00 | 39.85 | 2.57 |
276 | 277 | 3.994853 | GTGCAAAGCTGGGGCCAC | 61.995 | 66.667 | 4.39 | 0.00 | 39.73 | 5.01 |
279 | 280 | 4.347453 | CACGTGCAAAGCTGGGGC | 62.347 | 66.667 | 0.82 | 0.00 | 39.06 | 5.80 |
280 | 281 | 3.673484 | CCACGTGCAAAGCTGGGG | 61.673 | 66.667 | 10.91 | 0.00 | 0.00 | 4.96 |
281 | 282 | 4.347453 | GCCACGTGCAAAGCTGGG | 62.347 | 66.667 | 10.91 | 0.00 | 40.77 | 4.45 |
282 | 283 | 3.289834 | AGCCACGTGCAAAGCTGG | 61.290 | 61.111 | 14.98 | 0.00 | 44.83 | 4.85 |
283 | 284 | 2.050714 | CAGCCACGTGCAAAGCTG | 60.051 | 61.111 | 23.71 | 23.71 | 45.92 | 4.24 |
284 | 285 | 3.969802 | GCAGCCACGTGCAAAGCT | 61.970 | 61.111 | 10.91 | 10.80 | 43.41 | 3.74 |
285 | 286 | 3.969802 | AGCAGCCACGTGCAAAGC | 61.970 | 61.111 | 10.91 | 8.33 | 46.60 | 3.51 |
286 | 287 | 1.506309 | TACAGCAGCCACGTGCAAAG | 61.506 | 55.000 | 10.91 | 0.00 | 46.60 | 2.77 |
287 | 288 | 0.888736 | ATACAGCAGCCACGTGCAAA | 60.889 | 50.000 | 10.91 | 0.00 | 46.60 | 3.68 |
288 | 289 | 0.036858 | TATACAGCAGCCACGTGCAA | 60.037 | 50.000 | 10.91 | 0.00 | 46.60 | 4.08 |
289 | 290 | 0.739462 | GTATACAGCAGCCACGTGCA | 60.739 | 55.000 | 10.91 | 0.00 | 46.60 | 4.57 |
290 | 291 | 1.752501 | CGTATACAGCAGCCACGTGC | 61.753 | 60.000 | 10.91 | 5.91 | 44.35 | 5.34 |
291 | 292 | 0.179148 | TCGTATACAGCAGCCACGTG | 60.179 | 55.000 | 9.08 | 9.08 | 34.39 | 4.49 |
292 | 293 | 0.100682 | CTCGTATACAGCAGCCACGT | 59.899 | 55.000 | 3.32 | 0.00 | 34.39 | 4.49 |
293 | 294 | 0.380733 | TCTCGTATACAGCAGCCACG | 59.619 | 55.000 | 3.32 | 0.00 | 0.00 | 4.94 |
294 | 295 | 1.676529 | TCTCTCGTATACAGCAGCCAC | 59.323 | 52.381 | 3.32 | 0.00 | 0.00 | 5.01 |
295 | 296 | 1.950216 | CTCTCTCGTATACAGCAGCCA | 59.050 | 52.381 | 3.32 | 0.00 | 0.00 | 4.75 |
296 | 297 | 1.335506 | GCTCTCTCGTATACAGCAGCC | 60.336 | 57.143 | 3.32 | 0.00 | 0.00 | 4.85 |
297 | 298 | 1.661743 | CGCTCTCTCGTATACAGCAGC | 60.662 | 57.143 | 11.41 | 11.56 | 0.00 | 5.25 |
298 | 299 | 1.867865 | TCGCTCTCTCGTATACAGCAG | 59.132 | 52.381 | 11.41 | 5.69 | 0.00 | 4.24 |
299 | 300 | 1.867865 | CTCGCTCTCTCGTATACAGCA | 59.132 | 52.381 | 11.41 | 0.76 | 0.00 | 4.41 |
300 | 301 | 1.399215 | GCTCGCTCTCTCGTATACAGC | 60.399 | 57.143 | 3.32 | 3.01 | 0.00 | 4.40 |
301 | 302 | 1.136474 | CGCTCGCTCTCTCGTATACAG | 60.136 | 57.143 | 3.32 | 0.22 | 0.00 | 2.74 |
302 | 303 | 0.859882 | CGCTCGCTCTCTCGTATACA | 59.140 | 55.000 | 3.32 | 0.00 | 0.00 | 2.29 |
303 | 304 | 0.860533 | ACGCTCGCTCTCTCGTATAC | 59.139 | 55.000 | 0.00 | 0.00 | 33.02 | 1.47 |
304 | 305 | 0.859882 | CACGCTCGCTCTCTCGTATA | 59.140 | 55.000 | 0.00 | 0.00 | 33.51 | 1.47 |
305 | 306 | 0.810426 | TCACGCTCGCTCTCTCGTAT | 60.810 | 55.000 | 0.00 | 0.00 | 33.51 | 3.06 |
306 | 307 | 1.422179 | CTCACGCTCGCTCTCTCGTA | 61.422 | 60.000 | 0.00 | 0.00 | 33.51 | 3.43 |
307 | 308 | 2.742760 | TCACGCTCGCTCTCTCGT | 60.743 | 61.111 | 0.00 | 0.00 | 35.35 | 4.18 |
308 | 309 | 2.022623 | CTCACGCTCGCTCTCTCG | 59.977 | 66.667 | 0.00 | 0.00 | 0.00 | 4.04 |
309 | 310 | 2.277884 | GCTCACGCTCGCTCTCTC | 60.278 | 66.667 | 0.00 | 0.00 | 0.00 | 3.20 |
310 | 311 | 2.749839 | AGCTCACGCTCGCTCTCT | 60.750 | 61.111 | 0.00 | 0.00 | 45.15 | 3.10 |
311 | 312 | 2.579249 | CAGCTCACGCTCGCTCTC | 60.579 | 66.667 | 0.00 | 0.00 | 45.15 | 3.20 |
312 | 313 | 4.792648 | GCAGCTCACGCTCGCTCT | 62.793 | 66.667 | 0.00 | 0.00 | 45.15 | 4.09 |
317 | 318 | 3.474034 | GTCACGCAGCTCACGCTC | 61.474 | 66.667 | 5.60 | 0.00 | 45.15 | 5.03 |
321 | 322 | 3.858868 | TTCCGGTCACGCAGCTCAC | 62.859 | 63.158 | 0.00 | 0.00 | 39.22 | 3.51 |
322 | 323 | 3.573772 | CTTCCGGTCACGCAGCTCA | 62.574 | 63.158 | 0.00 | 0.00 | 39.22 | 4.26 |
323 | 324 | 2.811317 | CTTCCGGTCACGCAGCTC | 60.811 | 66.667 | 0.00 | 0.00 | 39.22 | 4.09 |
324 | 325 | 3.288308 | CTCTTCCGGTCACGCAGCT | 62.288 | 63.158 | 0.00 | 0.00 | 39.22 | 4.24 |
325 | 326 | 2.811317 | CTCTTCCGGTCACGCAGC | 60.811 | 66.667 | 0.00 | 0.00 | 39.22 | 5.25 |
326 | 327 | 1.444553 | GTCTCTTCCGGTCACGCAG | 60.445 | 63.158 | 0.00 | 0.00 | 39.22 | 5.18 |
327 | 328 | 2.649034 | GTCTCTTCCGGTCACGCA | 59.351 | 61.111 | 0.00 | 0.00 | 39.22 | 5.24 |
328 | 329 | 2.126031 | GGTCTCTTCCGGTCACGC | 60.126 | 66.667 | 0.00 | 0.00 | 39.22 | 5.34 |
329 | 330 | 2.178521 | CGGTCTCTTCCGGTCACG | 59.821 | 66.667 | 0.00 | 0.00 | 45.88 | 4.35 |
336 | 337 | 2.115343 | AAATTCAGCCGGTCTCTTCC | 57.885 | 50.000 | 1.90 | 0.00 | 0.00 | 3.46 |
337 | 338 | 3.074412 | TGAAAATTCAGCCGGTCTCTTC | 58.926 | 45.455 | 1.90 | 0.00 | 32.50 | 2.87 |
338 | 339 | 3.077359 | CTGAAAATTCAGCCGGTCTCTT | 58.923 | 45.455 | 10.00 | 0.00 | 46.97 | 2.85 |
339 | 340 | 2.704572 | CTGAAAATTCAGCCGGTCTCT | 58.295 | 47.619 | 10.00 | 0.00 | 46.97 | 3.10 |
349 | 350 | 1.578926 | CGCACCGGCTGAAAATTCA | 59.421 | 52.632 | 0.00 | 0.00 | 38.10 | 2.57 |
350 | 351 | 1.801512 | GCGCACCGGCTGAAAATTC | 60.802 | 57.895 | 0.30 | 0.00 | 38.10 | 2.17 |
351 | 352 | 2.258286 | GCGCACCGGCTGAAAATT | 59.742 | 55.556 | 0.30 | 0.00 | 38.10 | 1.82 |
362 | 363 | 2.126618 | GTTTAAAGCCGGCGCACC | 60.127 | 61.111 | 23.20 | 4.33 | 37.52 | 5.01 |
363 | 364 | 2.501008 | CGTTTAAAGCCGGCGCAC | 60.501 | 61.111 | 23.20 | 13.19 | 37.52 | 5.34 |
364 | 365 | 3.728636 | CCGTTTAAAGCCGGCGCA | 61.729 | 61.111 | 23.20 | 7.25 | 37.43 | 6.09 |
369 | 370 | 3.778969 | GGGAAACCGTTTAAAGCCG | 57.221 | 52.632 | 0.00 | 0.00 | 43.64 | 5.52 |
381 | 382 | 3.770388 | AGTGCTAGAGGTAGAAGGGAAAC | 59.230 | 47.826 | 0.00 | 0.00 | 0.00 | 2.78 |
382 | 383 | 4.062490 | AGTGCTAGAGGTAGAAGGGAAA | 57.938 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
383 | 384 | 3.759815 | AGTGCTAGAGGTAGAAGGGAA | 57.240 | 47.619 | 0.00 | 0.00 | 0.00 | 3.97 |
384 | 385 | 3.366396 | CAAGTGCTAGAGGTAGAAGGGA | 58.634 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
385 | 386 | 2.159028 | GCAAGTGCTAGAGGTAGAAGGG | 60.159 | 54.545 | 0.00 | 0.00 | 38.21 | 3.95 |
386 | 387 | 2.497675 | TGCAAGTGCTAGAGGTAGAAGG | 59.502 | 50.000 | 4.69 | 0.00 | 42.66 | 3.46 |
387 | 388 | 3.876274 | TGCAAGTGCTAGAGGTAGAAG | 57.124 | 47.619 | 4.69 | 0.00 | 42.66 | 2.85 |
388 | 389 | 3.515502 | ACATGCAAGTGCTAGAGGTAGAA | 59.484 | 43.478 | 4.69 | 0.00 | 42.66 | 2.10 |
389 | 390 | 3.099905 | ACATGCAAGTGCTAGAGGTAGA | 58.900 | 45.455 | 4.69 | 0.00 | 42.66 | 2.59 |
390 | 391 | 3.533606 | ACATGCAAGTGCTAGAGGTAG | 57.466 | 47.619 | 4.69 | 0.00 | 42.66 | 3.18 |
391 | 392 | 3.981071 | AACATGCAAGTGCTAGAGGTA | 57.019 | 42.857 | 4.69 | 0.00 | 42.66 | 3.08 |
392 | 393 | 2.867109 | AACATGCAAGTGCTAGAGGT | 57.133 | 45.000 | 4.69 | 0.00 | 42.66 | 3.85 |
393 | 394 | 3.755378 | AGAAAACATGCAAGTGCTAGAGG | 59.245 | 43.478 | 4.69 | 0.00 | 42.66 | 3.69 |
394 | 395 | 4.435253 | CGAGAAAACATGCAAGTGCTAGAG | 60.435 | 45.833 | 4.69 | 0.00 | 42.66 | 2.43 |
395 | 396 | 3.433274 | CGAGAAAACATGCAAGTGCTAGA | 59.567 | 43.478 | 4.69 | 0.00 | 42.66 | 2.43 |
396 | 397 | 3.433274 | TCGAGAAAACATGCAAGTGCTAG | 59.567 | 43.478 | 4.69 | 0.00 | 42.66 | 3.42 |
397 | 398 | 3.398406 | TCGAGAAAACATGCAAGTGCTA | 58.602 | 40.909 | 4.69 | 0.00 | 42.66 | 3.49 |
398 | 399 | 2.221169 | TCGAGAAAACATGCAAGTGCT | 58.779 | 42.857 | 4.69 | 0.00 | 42.66 | 4.40 |
399 | 400 | 2.224079 | TCTCGAGAAAACATGCAAGTGC | 59.776 | 45.455 | 14.01 | 0.00 | 42.50 | 4.40 |
400 | 401 | 3.742882 | TCTCTCGAGAAAACATGCAAGTG | 59.257 | 43.478 | 17.36 | 0.00 | 33.91 | 3.16 |
401 | 402 | 3.995199 | TCTCTCGAGAAAACATGCAAGT | 58.005 | 40.909 | 17.36 | 0.00 | 33.91 | 3.16 |
402 | 403 | 4.997905 | TTCTCTCGAGAAAACATGCAAG | 57.002 | 40.909 | 17.36 | 0.47 | 43.79 | 4.01 |
413 | 414 | 2.687425 | CAGCTCAAGGATTCTCTCGAGA | 59.313 | 50.000 | 15.70 | 15.70 | 35.27 | 4.04 |
414 | 415 | 2.687425 | TCAGCTCAAGGATTCTCTCGAG | 59.313 | 50.000 | 5.93 | 5.93 | 0.00 | 4.04 |
415 | 416 | 2.687425 | CTCAGCTCAAGGATTCTCTCGA | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
416 | 417 | 2.687425 | TCTCAGCTCAAGGATTCTCTCG | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
417 | 418 | 3.953612 | TCTCTCAGCTCAAGGATTCTCTC | 59.046 | 47.826 | 0.00 | 0.00 | 0.00 | 3.20 |
418 | 419 | 3.956199 | CTCTCTCAGCTCAAGGATTCTCT | 59.044 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
419 | 420 | 3.701040 | ACTCTCTCAGCTCAAGGATTCTC | 59.299 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
420 | 421 | 3.711863 | ACTCTCTCAGCTCAAGGATTCT | 58.288 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
421 | 422 | 4.183101 | CAACTCTCTCAGCTCAAGGATTC | 58.817 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
422 | 423 | 3.619487 | GCAACTCTCTCAGCTCAAGGATT | 60.619 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
423 | 424 | 2.093553 | GCAACTCTCTCAGCTCAAGGAT | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
424 | 425 | 1.274728 | GCAACTCTCTCAGCTCAAGGA | 59.725 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
425 | 426 | 1.001746 | TGCAACTCTCTCAGCTCAAGG | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
426 | 427 | 2.452295 | TGCAACTCTCTCAGCTCAAG | 57.548 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
427 | 428 | 2.549563 | CCTTGCAACTCTCTCAGCTCAA | 60.550 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
428 | 429 | 1.001746 | CCTTGCAACTCTCTCAGCTCA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
429 | 430 | 1.001860 | ACCTTGCAACTCTCTCAGCTC | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
430 | 431 | 1.055040 | ACCTTGCAACTCTCTCAGCT | 58.945 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
431 | 432 | 2.232452 | TCTACCTTGCAACTCTCTCAGC | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
432 | 433 | 3.761218 | TCTCTACCTTGCAACTCTCTCAG | 59.239 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
433 | 434 | 3.767711 | TCTCTACCTTGCAACTCTCTCA | 58.232 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
434 | 435 | 4.461081 | TCTTCTCTACCTTGCAACTCTCTC | 59.539 | 45.833 | 0.00 | 0.00 | 0.00 | 3.20 |
435 | 436 | 4.411927 | TCTTCTCTACCTTGCAACTCTCT | 58.588 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
436 | 437 | 4.792521 | TCTTCTCTACCTTGCAACTCTC | 57.207 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
437 | 438 | 4.835615 | TCTTCTTCTCTACCTTGCAACTCT | 59.164 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
438 | 439 | 5.140747 | TCTTCTTCTCTACCTTGCAACTC | 57.859 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
439 | 440 | 5.546526 | CTTCTTCTTCTCTACCTTGCAACT | 58.453 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
440 | 441 | 4.153296 | GCTTCTTCTTCTCTACCTTGCAAC | 59.847 | 45.833 | 0.00 | 0.00 | 0.00 | 4.17 |
441 | 442 | 4.202357 | TGCTTCTTCTTCTCTACCTTGCAA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 4.08 |
442 | 443 | 3.324846 | TGCTTCTTCTTCTCTACCTTGCA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 4.08 |
443 | 444 | 3.931578 | TGCTTCTTCTTCTCTACCTTGC | 58.068 | 45.455 | 0.00 | 0.00 | 0.00 | 4.01 |
444 | 445 | 3.932089 | GCTGCTTCTTCTTCTCTACCTTG | 59.068 | 47.826 | 0.00 | 0.00 | 0.00 | 3.61 |
445 | 446 | 3.367910 | CGCTGCTTCTTCTTCTCTACCTT | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 3.50 |
446 | 447 | 2.165437 | CGCTGCTTCTTCTTCTCTACCT | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
447 | 448 | 2.535331 | CGCTGCTTCTTCTTCTCTACC | 58.465 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
448 | 449 | 1.923864 | GCGCTGCTTCTTCTTCTCTAC | 59.076 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
449 | 450 | 1.821753 | AGCGCTGCTTCTTCTTCTCTA | 59.178 | 47.619 | 10.39 | 0.00 | 33.89 | 2.43 |
450 | 451 | 0.607620 | AGCGCTGCTTCTTCTTCTCT | 59.392 | 50.000 | 10.39 | 0.00 | 33.89 | 3.10 |
451 | 452 | 0.720590 | CAGCGCTGCTTCTTCTTCTC | 59.279 | 55.000 | 26.68 | 0.00 | 36.40 | 2.87 |
452 | 453 | 2.838286 | CAGCGCTGCTTCTTCTTCT | 58.162 | 52.632 | 26.68 | 0.00 | 36.40 | 2.85 |
676 | 680 | 2.126031 | GAGACGAACCCGAGGTGC | 60.126 | 66.667 | 0.00 | 0.00 | 35.34 | 5.01 |
716 | 753 | 4.816984 | GAGGAGGAGGCCGTCGGA | 62.817 | 72.222 | 17.49 | 0.00 | 0.00 | 4.55 |
797 | 848 | 4.704833 | GCTGCGCAACTGGGAGGA | 62.705 | 66.667 | 13.05 | 0.00 | 0.00 | 3.71 |
799 | 850 | 4.711949 | AGGCTGCGCAACTGGGAG | 62.712 | 66.667 | 13.05 | 0.00 | 0.00 | 4.30 |
806 | 857 | 4.399395 | CCAGGAGAGGCTGCGCAA | 62.399 | 66.667 | 13.05 | 0.00 | 0.00 | 4.85 |
981 | 1036 | 2.361483 | TCTGCCACCGCGTACCTA | 60.361 | 61.111 | 4.92 | 0.00 | 38.08 | 3.08 |
1253 | 1317 | 1.228894 | TTCAGGTCAGGGAGCTCGT | 60.229 | 57.895 | 7.83 | 0.00 | 38.40 | 4.18 |
1256 | 1320 | 2.286523 | CCGTTCAGGTCAGGGAGCT | 61.287 | 63.158 | 0.00 | 0.00 | 41.33 | 4.09 |
1270 | 1334 | 3.195002 | CATCGACGCCATGCCGTT | 61.195 | 61.111 | 2.18 | 0.00 | 42.24 | 4.44 |
1496 | 2044 | 0.893270 | TTTCAGTGGGTTGATGGCGG | 60.893 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1656 | 2204 | 1.200948 | GCAGATGGAACTTGGCTTGAC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
1666 | 2214 | 4.009675 | TGAATGTTACCTGCAGATGGAAC | 58.990 | 43.478 | 17.39 | 13.10 | 0.00 | 3.62 |
1777 | 2328 | 6.441274 | CAAGCACATAATTTCACAAGACACT | 58.559 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1778 | 2329 | 5.630680 | CCAAGCACATAATTTCACAAGACAC | 59.369 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1839 | 2395 | 8.514594 | CACTTTTCCTAAATTCTAGCACAATCA | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
1870 | 2426 | 5.246883 | CCTCCCTCAAATTCACCTCAATTTT | 59.753 | 40.000 | 0.00 | 0.00 | 34.37 | 1.82 |
1967 | 2532 | 5.468072 | CACTTGAGCTATATTCCATCCACAC | 59.532 | 44.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2051 | 2616 | 3.039011 | GGATAAGAGGTGGCAGGTTCTA | 58.961 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2086 | 2651 | 3.767673 | ACTTGTCGCTGATTTAGTAGGGA | 59.232 | 43.478 | 0.00 | 0.00 | 34.08 | 4.20 |
2087 | 2652 | 4.124851 | ACTTGTCGCTGATTTAGTAGGG | 57.875 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
2088 | 2653 | 8.916654 | CATATTACTTGTCGCTGATTTAGTAGG | 58.083 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
2089 | 2654 | 8.916654 | CCATATTACTTGTCGCTGATTTAGTAG | 58.083 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
2090 | 2655 | 8.635328 | TCCATATTACTTGTCGCTGATTTAGTA | 58.365 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2091 | 2656 | 7.497595 | TCCATATTACTTGTCGCTGATTTAGT | 58.502 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
2092 | 2657 | 7.946655 | TCCATATTACTTGTCGCTGATTTAG | 57.053 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2093 | 2658 | 7.042992 | CGTTCCATATTACTTGTCGCTGATTTA | 60.043 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2094 | 2659 | 6.238103 | CGTTCCATATTACTTGTCGCTGATTT | 60.238 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
2095 | 2660 | 5.234329 | CGTTCCATATTACTTGTCGCTGATT | 59.766 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2096 | 2661 | 4.745125 | CGTTCCATATTACTTGTCGCTGAT | 59.255 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
2097 | 2662 | 4.109766 | CGTTCCATATTACTTGTCGCTGA | 58.890 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
2098 | 2663 | 3.245284 | CCGTTCCATATTACTTGTCGCTG | 59.755 | 47.826 | 0.00 | 0.00 | 0.00 | 5.18 |
2099 | 2664 | 3.131577 | TCCGTTCCATATTACTTGTCGCT | 59.868 | 43.478 | 0.00 | 0.00 | 0.00 | 4.93 |
2100 | 2665 | 3.450578 | TCCGTTCCATATTACTTGTCGC | 58.549 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
2101 | 2666 | 4.049186 | CCTCCGTTCCATATTACTTGTCG | 58.951 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
2102 | 2667 | 4.100498 | TCCCTCCGTTCCATATTACTTGTC | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
2103 | 2668 | 4.035112 | TCCCTCCGTTCCATATTACTTGT | 58.965 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
2104 | 2669 | 4.101119 | ACTCCCTCCGTTCCATATTACTTG | 59.899 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
2105 | 2670 | 4.296056 | ACTCCCTCCGTTCCATATTACTT | 58.704 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
2106 | 2671 | 3.924922 | ACTCCCTCCGTTCCATATTACT | 58.075 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2107 | 2672 | 5.245526 | ACATACTCCCTCCGTTCCATATTAC | 59.754 | 44.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2108 | 2673 | 5.399991 | ACATACTCCCTCCGTTCCATATTA | 58.600 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
2109 | 2674 | 4.232091 | ACATACTCCCTCCGTTCCATATT | 58.768 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
2110 | 2675 | 3.833070 | GACATACTCCCTCCGTTCCATAT | 59.167 | 47.826 | 0.00 | 0.00 | 0.00 | 1.78 |
2111 | 2676 | 3.228453 | GACATACTCCCTCCGTTCCATA | 58.772 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2112 | 2677 | 2.040178 | GACATACTCCCTCCGTTCCAT | 58.960 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2113 | 2678 | 1.481871 | GACATACTCCCTCCGTTCCA | 58.518 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2114 | 2679 | 0.384669 | CGACATACTCCCTCCGTTCC | 59.615 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2115 | 2680 | 0.248949 | GCGACATACTCCCTCCGTTC | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2116 | 2681 | 0.968901 | TGCGACATACTCCCTCCGTT | 60.969 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
2117 | 2682 | 0.755698 | ATGCGACATACTCCCTCCGT | 60.756 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2118 | 2683 | 0.319040 | CATGCGACATACTCCCTCCG | 60.319 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2119 | 2684 | 0.034059 | CCATGCGACATACTCCCTCC | 59.966 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2120 | 2685 | 0.601311 | GCCATGCGACATACTCCCTC | 60.601 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2121 | 2686 | 1.447643 | GCCATGCGACATACTCCCT | 59.552 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
2122 | 2687 | 1.598130 | GGCCATGCGACATACTCCC | 60.598 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
2123 | 2688 | 1.598130 | GGGCCATGCGACATACTCC | 60.598 | 63.158 | 4.39 | 0.00 | 0.00 | 3.85 |
2124 | 2689 | 0.179045 | AAGGGCCATGCGACATACTC | 60.179 | 55.000 | 6.18 | 0.00 | 0.00 | 2.59 |
2125 | 2690 | 0.464373 | CAAGGGCCATGCGACATACT | 60.464 | 55.000 | 6.18 | 0.00 | 0.00 | 2.12 |
2126 | 2691 | 0.748005 | ACAAGGGCCATGCGACATAC | 60.748 | 55.000 | 9.01 | 0.00 | 0.00 | 2.39 |
2127 | 2692 | 0.747644 | CACAAGGGCCATGCGACATA | 60.748 | 55.000 | 9.01 | 0.00 | 0.00 | 2.29 |
2185 | 2758 | 2.238898 | ACTTATTTTGGGACGGAGGGAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2186 | 2759 | 2.271777 | ACTTATTTTGGGACGGAGGGA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
2187 | 2760 | 2.752903 | CAACTTATTTTGGGACGGAGGG | 59.247 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2188 | 2761 | 2.163613 | GCAACTTATTTTGGGACGGAGG | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2189 | 2762 | 2.163613 | GGCAACTTATTTTGGGACGGAG | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2190 | 2763 | 2.164338 | GGCAACTTATTTTGGGACGGA | 58.836 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
2191 | 2764 | 2.647529 | GGCAACTTATTTTGGGACGG | 57.352 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2205 | 2778 | 8.970859 | ATGATAGGCTGATATATAAAGGCAAC | 57.029 | 34.615 | 18.33 | 11.64 | 38.87 | 4.17 |
2206 | 2779 | 8.996655 | AGATGATAGGCTGATATATAAAGGCAA | 58.003 | 33.333 | 18.33 | 6.49 | 38.87 | 4.52 |
2207 | 2780 | 8.558713 | AGATGATAGGCTGATATATAAAGGCA | 57.441 | 34.615 | 18.33 | 8.89 | 38.87 | 4.75 |
2208 | 2781 | 9.844257 | AAAGATGATAGGCTGATATATAAAGGC | 57.156 | 33.333 | 11.55 | 11.55 | 36.79 | 4.35 |
2214 | 2787 | 9.445878 | CAACACAAAGATGATAGGCTGATATAT | 57.554 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2215 | 2788 | 8.650490 | TCAACACAAAGATGATAGGCTGATATA | 58.350 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2345 | 2922 | 1.961793 | TTTTTGGGGAGACACGTCTG | 58.038 | 50.000 | 4.01 | 0.00 | 40.61 | 3.51 |
2371 | 2948 | 2.160721 | AGATACCTTCGAGCTCCCAA | 57.839 | 50.000 | 8.47 | 0.00 | 0.00 | 4.12 |
2383 | 2960 | 2.511600 | GCGCACGGCAAGATACCT | 60.512 | 61.111 | 0.30 | 0.00 | 42.87 | 3.08 |
2867 | 3460 | 6.166982 | ACATGAAACAAGGAGAGCTAGTTAC | 58.833 | 40.000 | 0.00 | 0.00 | 0.00 | 2.50 |
2940 | 3533 | 5.012561 | GCTGTGATGAATAATACTCCCTCCT | 59.987 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3166 | 3770 | 2.965147 | CAAACTCATGGGGAAAGTTGGT | 59.035 | 45.455 | 0.00 | 0.00 | 33.68 | 3.67 |
3176 | 3780 | 2.299867 | CCAAAAGGTCCAAACTCATGGG | 59.700 | 50.000 | 0.00 | 0.00 | 41.05 | 4.00 |
3311 | 3917 | 2.148768 | CCGCGACTAAAGACCCTTTTT | 58.851 | 47.619 | 8.23 | 0.00 | 0.00 | 1.94 |
3419 | 4026 | 0.250989 | CTTTAGTCCCGGTTGGCCAA | 60.251 | 55.000 | 16.05 | 16.05 | 34.09 | 4.52 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.