Multiple sequence alignment - TraesCS1D01G290700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G290700 chr1D 100.000 7100 0 0 1 7100 388652268 388645169 0.000000e+00 13112
1 TraesCS1D01G290700 chr1D 91.558 462 32 5 2065 2525 84009550 84010005 1.300000e-176 630
2 TraesCS1D01G290700 chr1A 93.710 4801 191 45 506 5253 487742128 487737386 0.000000e+00 7090
3 TraesCS1D01G290700 chr1A 91.769 1871 88 24 5252 7099 487737292 487735465 0.000000e+00 2542
4 TraesCS1D01G290700 chr1B 93.506 4789 206 40 544 5275 522061774 522057034 0.000000e+00 7023
5 TraesCS1D01G290700 chr1B 93.463 1698 86 14 5274 6958 522056875 522055190 0.000000e+00 2497
6 TraesCS1D01G290700 chr5D 92.230 695 33 6 1847 2525 54190774 54190085 0.000000e+00 965
7 TraesCS1D01G290700 chr5D 86.122 490 52 9 9 486 286931788 286932273 1.370000e-141 514
8 TraesCS1D01G290700 chr3A 88.679 742 72 7 954 1690 599860934 599861668 0.000000e+00 894
9 TraesCS1D01G290700 chr3A 95.595 227 10 0 1847 2073 433767772 433767546 1.460000e-96 364
10 TraesCS1D01G290700 chr3A 80.928 388 66 8 1302 1685 579553138 579553521 4.160000e-77 300
11 TraesCS1D01G290700 chr3A 76.660 467 91 11 5624 6084 599866344 599866798 7.120000e-60 243
12 TraesCS1D01G290700 chr3A 84.737 190 27 2 4820 5009 599864611 599864798 9.400000e-44 189
13 TraesCS1D01G290700 chr3D 86.853 753 63 17 954 1695 457018659 457019386 0.000000e+00 809
14 TraesCS1D01G290700 chr3B 90.391 562 54 0 1134 1695 603601710 603602271 0.000000e+00 739
15 TraesCS1D01G290700 chr3B 80.928 388 66 8 1302 1685 576657676 576658059 4.160000e-77 300
16 TraesCS1D01G290700 chr3B 90.164 122 10 2 4604 4724 603605237 603605357 2.650000e-34 158
17 TraesCS1D01G290700 chr7D 91.810 464 29 7 2065 2525 628448032 628448489 7.770000e-179 638
18 TraesCS1D01G290700 chr7D 89.249 493 37 4 1838 2317 85520221 85520710 2.830000e-168 603
19 TraesCS1D01G290700 chr4B 90.753 465 33 7 2065 2525 659732925 659732467 4.710000e-171 612
20 TraesCS1D01G290700 chr6D 89.733 487 34 4 1847 2320 65146045 65146528 6.090000e-170 608
21 TraesCS1D01G290700 chr6D 88.478 460 44 7 29 482 433911072 433910616 1.350000e-151 547
22 TraesCS1D01G290700 chr6D 86.965 491 47 11 9 486 144603760 144603274 2.910000e-148 536
23 TraesCS1D01G290700 chr6D 87.553 474 39 11 1847 2319 32521382 32520928 1.360000e-146 531
24 TraesCS1D01G290700 chr7A 90.476 462 35 7 2065 2525 663032223 663031770 1.020000e-167 601
25 TraesCS1D01G290700 chr2D 89.957 468 34 8 2065 2525 397139143 397138682 6.130000e-165 592
26 TraesCS1D01G290700 chr2D 86.680 488 47 12 9 486 340277897 340277418 6.310000e-145 525
27 TraesCS1D01G290700 chr2D 83.430 344 55 2 1222 1564 161376696 161376354 1.150000e-82 318
28 TraesCS1D01G290700 chrUn 88.501 487 40 4 1847 2320 31511883 31511400 6.180000e-160 575
29 TraesCS1D01G290700 chr4A 87.860 486 44 11 9 486 631640896 631641374 2.240000e-154 556
30 TraesCS1D01G290700 chr7B 92.954 369 23 2 2157 2525 668459760 668459395 1.050000e-147 534
31 TraesCS1D01G290700 chr7B 86.542 483 53 10 9 486 147574048 147573573 8.160000e-144 521
32 TraesCS1D01G290700 chr4D 86.885 488 47 12 12 486 69135732 69135249 1.360000e-146 531
33 TraesCS1D01G290700 chr5A 87.473 463 49 7 29 486 472922199 472922657 6.310000e-145 525
34 TraesCS1D01G290700 chr5A 77.049 488 90 17 1217 1693 611564612 611565088 1.960000e-65 261
35 TraesCS1D01G290700 chr6B 85.800 500 53 12 2 490 599726584 599727076 1.370000e-141 514
36 TraesCS1D01G290700 chr2A 91.223 319 12 4 1847 2152 353868850 353869165 3.060000e-113 420
37 TraesCS1D01G290700 chr2B 83.140 344 56 2 1222 1564 217793154 217792812 5.350000e-81 313


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G290700 chr1D 388645169 388652268 7099 True 13112.0 13112 100.000000 1 7100 1 chr1D.!!$R1 7099
1 TraesCS1D01G290700 chr1A 487735465 487742128 6663 True 4816.0 7090 92.739500 506 7099 2 chr1A.!!$R1 6593
2 TraesCS1D01G290700 chr1B 522055190 522061774 6584 True 4760.0 7023 93.484500 544 6958 2 chr1B.!!$R1 6414
3 TraesCS1D01G290700 chr5D 54190085 54190774 689 True 965.0 965 92.230000 1847 2525 1 chr5D.!!$R1 678
4 TraesCS1D01G290700 chr3A 599860934 599866798 5864 False 442.0 894 83.358667 954 6084 3 chr3A.!!$F2 5130
5 TraesCS1D01G290700 chr3D 457018659 457019386 727 False 809.0 809 86.853000 954 1695 1 chr3D.!!$F1 741
6 TraesCS1D01G290700 chr3B 603601710 603605357 3647 False 448.5 739 90.277500 1134 4724 2 chr3B.!!$F2 3590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 454 0.036448 TGGCCGACCCAAACGAATAA 59.964 50.000 0.00 0.00 41.82 1.40 F
472 473 0.179174 AAAAAGGGATAAAGCGCGCG 60.179 50.000 28.44 28.44 0.00 6.86 F
490 491 0.318445 CGTCGGTTTGGTTCGTCTCT 60.318 55.000 0.00 0.00 0.00 3.10 F
537 538 0.392336 ATCTCGCCAGATTCCTCTGC 59.608 55.000 0.00 0.00 46.39 4.26 F
1714 1753 0.462047 GCCGAGATCCACCGTGATTT 60.462 55.000 0.00 0.00 0.00 2.17 F
1745 1784 0.602638 TCGCTGCACTTTTGGACGAT 60.603 50.000 0.00 0.00 0.00 3.73 F
3519 4489 0.744414 TGGCACAAGCTATCCTTCGC 60.744 55.000 0.00 0.00 41.70 4.70 F
4252 6101 1.135141 TGAAACACAGTTGCAAGCACC 60.135 47.619 0.00 0.00 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1788 1831 3.135712 ACCAAAAATTCCACCCAGAAACC 59.864 43.478 0.00 0.0 0.00 3.27 R
2103 2703 4.597079 ACTACAAGCAAAACGACATTGTG 58.403 39.130 0.00 0.0 35.77 3.33 R
2449 3179 9.197306 ACTTAATTACTTTTTCAACAAGAGGGT 57.803 29.630 0.00 0.0 0.00 4.34 R
2525 3255 7.972277 CAGGAAATCAACAAGAGAAATATGGTG 59.028 37.037 0.00 0.0 33.06 4.17 R
3458 4419 0.750850 ATAGCATGGTAAGACCGCGT 59.249 50.000 8.98 0.0 42.58 6.01 R
3618 4588 1.606668 CCAAGAACTTGCTTTGCCGTA 59.393 47.619 8.81 0.0 39.16 4.02 R
4495 6360 2.577606 TTGTGTGGATAACTGGTGGG 57.422 50.000 0.00 0.0 0.00 4.61 R
6127 9185 0.171903 CGGACTTACGTGACCGGAAT 59.828 55.000 9.46 0.0 40.47 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.125552 TGACATGAAGGCGCTCCG 60.126 61.111 7.64 0.00 37.47 4.63
18 19 2.892425 GACATGAAGGCGCTCCGG 60.892 66.667 7.64 0.00 37.47 5.14
31 32 2.364317 TCCGGCTCAAGGAGGAGG 60.364 66.667 0.00 0.00 35.41 4.30
32 33 2.364317 CCGGCTCAAGGAGGAGGA 60.364 66.667 0.00 0.00 35.41 3.71
33 34 2.430610 CCGGCTCAAGGAGGAGGAG 61.431 68.421 0.00 0.00 35.41 3.69
34 35 2.430610 CGGCTCAAGGAGGAGGAGG 61.431 68.421 0.00 0.00 35.41 4.30
35 36 1.002274 GGCTCAAGGAGGAGGAGGA 59.998 63.158 0.00 0.00 35.41 3.71
36 37 1.048160 GGCTCAAGGAGGAGGAGGAG 61.048 65.000 0.00 0.00 35.41 3.69
37 38 1.048160 GCTCAAGGAGGAGGAGGAGG 61.048 65.000 0.00 0.00 35.41 4.30
38 39 0.633921 CTCAAGGAGGAGGAGGAGGA 59.366 60.000 0.00 0.00 0.00 3.71
39 40 0.633921 TCAAGGAGGAGGAGGAGGAG 59.366 60.000 0.00 0.00 0.00 3.69
40 41 0.398381 CAAGGAGGAGGAGGAGGAGG 60.398 65.000 0.00 0.00 0.00 4.30
41 42 0.556380 AAGGAGGAGGAGGAGGAGGA 60.556 60.000 0.00 0.00 0.00 3.71
42 43 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
43 44 1.152546 GAGGAGGAGGAGGAGGAGC 60.153 68.421 0.00 0.00 0.00 4.70
44 45 2.520741 GGAGGAGGAGGAGGAGCG 60.521 72.222 0.00 0.00 0.00 5.03
45 46 3.223589 GAGGAGGAGGAGGAGCGC 61.224 72.222 0.00 0.00 0.00 5.92
119 120 4.728102 CGTACCAGGCGGCGTTCA 62.728 66.667 9.37 0.00 34.57 3.18
120 121 2.813908 GTACCAGGCGGCGTTCAG 60.814 66.667 9.37 0.00 34.57 3.02
121 122 4.077184 TACCAGGCGGCGTTCAGG 62.077 66.667 9.37 10.33 34.57 3.86
128 129 4.077184 CGGCGTTCAGGTGGGCTA 62.077 66.667 0.00 0.00 0.00 3.93
129 130 2.125106 GGCGTTCAGGTGGGCTAG 60.125 66.667 0.00 0.00 0.00 3.42
130 131 2.820037 GCGTTCAGGTGGGCTAGC 60.820 66.667 6.04 6.04 0.00 3.42
131 132 2.125106 CGTTCAGGTGGGCTAGCC 60.125 66.667 26.55 26.55 0.00 3.93
142 143 4.228567 GCTAGCCCTGCTCCGGTC 62.229 72.222 2.29 0.00 40.44 4.79
143 144 2.443016 CTAGCCCTGCTCCGGTCT 60.443 66.667 0.00 0.00 40.44 3.85
144 145 2.038975 TAGCCCTGCTCCGGTCTT 59.961 61.111 0.00 0.00 40.44 3.01
145 146 2.022240 CTAGCCCTGCTCCGGTCTTC 62.022 65.000 0.00 0.00 40.44 2.87
146 147 2.798445 TAGCCCTGCTCCGGTCTTCA 62.798 60.000 0.00 0.00 40.44 3.02
147 148 3.036429 GCCCTGCTCCGGTCTTCAT 62.036 63.158 0.00 0.00 0.00 2.57
148 149 1.144936 CCCTGCTCCGGTCTTCATC 59.855 63.158 0.00 0.00 0.00 2.92
149 150 1.227089 CCTGCTCCGGTCTTCATCG 60.227 63.158 0.00 0.00 0.00 3.84
150 151 1.667154 CCTGCTCCGGTCTTCATCGA 61.667 60.000 0.00 0.00 0.00 3.59
151 152 0.526524 CTGCTCCGGTCTTCATCGAC 60.527 60.000 0.00 0.00 0.00 4.20
158 159 3.330766 GTCTTCATCGACCTCACCG 57.669 57.895 0.00 0.00 0.00 4.94
159 160 0.809385 GTCTTCATCGACCTCACCGA 59.191 55.000 0.00 0.00 40.53 4.69
160 161 0.809385 TCTTCATCGACCTCACCGAC 59.191 55.000 0.00 0.00 38.97 4.79
161 162 0.523546 CTTCATCGACCTCACCGACG 60.524 60.000 0.00 0.00 38.97 5.12
162 163 0.956902 TTCATCGACCTCACCGACGA 60.957 55.000 0.00 0.00 38.97 4.20
163 164 1.226323 CATCGACCTCACCGACGAC 60.226 63.158 0.00 0.00 38.97 4.34
164 165 2.747822 ATCGACCTCACCGACGACG 61.748 63.158 0.00 0.00 38.97 5.12
186 187 2.355363 CGTCGACGTCAAGGGCAA 60.355 61.111 29.08 0.00 34.11 4.52
187 188 2.372690 CGTCGACGTCAAGGGCAAG 61.373 63.158 29.08 0.00 34.11 4.01
188 189 2.027625 GTCGACGTCAAGGGCAAGG 61.028 63.158 17.16 0.00 0.00 3.61
189 190 3.423154 CGACGTCAAGGGCAAGGC 61.423 66.667 17.16 0.00 0.00 4.35
190 191 2.032681 GACGTCAAGGGCAAGGCT 59.967 61.111 11.55 0.00 0.00 4.58
191 192 2.281761 ACGTCAAGGGCAAGGCTG 60.282 61.111 0.00 0.00 0.00 4.85
192 193 2.032528 CGTCAAGGGCAAGGCTGA 59.967 61.111 0.00 0.00 0.00 4.26
193 194 2.328099 CGTCAAGGGCAAGGCTGAC 61.328 63.158 6.10 6.10 35.82 3.51
194 195 2.032528 TCAAGGGCAAGGCTGACG 59.967 61.111 0.00 0.00 0.00 4.35
195 196 2.032528 CAAGGGCAAGGCTGACGA 59.967 61.111 0.00 0.00 0.00 4.20
196 197 2.032681 AAGGGCAAGGCTGACGAC 59.967 61.111 0.00 0.00 0.00 4.34
197 198 3.883744 AAGGGCAAGGCTGACGACG 62.884 63.158 0.00 0.00 0.00 5.12
198 199 4.681978 GGGCAAGGCTGACGACGT 62.682 66.667 0.00 0.00 0.00 4.34
199 200 3.112709 GGCAAGGCTGACGACGTC 61.113 66.667 20.97 20.97 0.00 4.34
200 201 2.049063 GCAAGGCTGACGACGTCT 60.049 61.111 26.86 5.60 33.15 4.18
201 202 1.211969 GCAAGGCTGACGACGTCTA 59.788 57.895 26.86 13.45 33.15 2.59
202 203 0.798771 GCAAGGCTGACGACGTCTAG 60.799 60.000 26.86 21.59 33.15 2.43
203 204 0.179161 CAAGGCTGACGACGTCTAGG 60.179 60.000 26.86 17.60 33.15 3.02
204 205 1.313812 AAGGCTGACGACGTCTAGGG 61.314 60.000 26.86 15.44 33.15 3.53
205 206 2.102553 GCTGACGACGTCTAGGGC 59.897 66.667 26.86 20.22 33.15 5.19
206 207 2.697761 GCTGACGACGTCTAGGGCA 61.698 63.158 26.86 5.61 33.15 5.36
207 208 1.429825 CTGACGACGTCTAGGGCAG 59.570 63.158 26.86 12.04 33.15 4.85
208 209 2.102553 GACGACGTCTAGGGCAGC 59.897 66.667 20.52 0.00 0.00 5.25
209 210 3.736482 GACGACGTCTAGGGCAGCG 62.736 68.421 20.52 0.00 0.00 5.18
210 211 3.812019 CGACGTCTAGGGCAGCGT 61.812 66.667 14.70 0.00 38.92 5.07
211 212 2.202623 GACGTCTAGGGCAGCGTG 60.203 66.667 8.70 0.00 37.21 5.34
212 213 4.436998 ACGTCTAGGGCAGCGTGC 62.437 66.667 1.92 1.92 44.08 5.34
237 238 4.389576 CAGCAGACGGGCGCAAAC 62.390 66.667 10.83 0.00 39.27 2.93
238 239 4.626081 AGCAGACGGGCGCAAACT 62.626 61.111 10.83 0.00 39.27 2.66
239 240 3.660111 GCAGACGGGCGCAAACTT 61.660 61.111 10.83 0.00 0.00 2.66
240 241 3.030652 CAGACGGGCGCAAACTTT 58.969 55.556 10.83 0.00 0.00 2.66
241 242 1.358759 CAGACGGGCGCAAACTTTT 59.641 52.632 10.83 0.00 0.00 2.27
242 243 0.248866 CAGACGGGCGCAAACTTTTT 60.249 50.000 10.83 0.00 0.00 1.94
289 290 8.617290 ATTATATTTAAGTAGACTTTGGCCGG 57.383 34.615 0.00 0.00 37.40 6.13
290 291 2.103537 TTAAGTAGACTTTGGCCGGC 57.896 50.000 21.18 21.18 37.40 6.13
291 292 0.108520 TAAGTAGACTTTGGCCGGCG 60.109 55.000 22.54 9.21 37.40 6.46
292 293 2.047560 GTAGACTTTGGCCGGCGT 60.048 61.111 22.54 13.06 0.00 5.68
293 294 1.670083 GTAGACTTTGGCCGGCGTT 60.670 57.895 22.54 1.31 0.00 4.84
294 295 1.071814 TAGACTTTGGCCGGCGTTT 59.928 52.632 22.54 10.44 0.00 3.60
295 296 1.231958 TAGACTTTGGCCGGCGTTTG 61.232 55.000 22.54 13.30 0.00 2.93
296 297 2.517402 ACTTTGGCCGGCGTTTGA 60.517 55.556 22.54 3.25 0.00 2.69
297 298 2.050442 CTTTGGCCGGCGTTTGAC 60.050 61.111 22.54 5.65 0.00 3.18
298 299 3.551887 CTTTGGCCGGCGTTTGACC 62.552 63.158 22.54 4.79 0.00 4.02
306 307 3.284449 GCGTTTGACCGGCCACTT 61.284 61.111 0.00 0.00 0.00 3.16
307 308 1.962306 GCGTTTGACCGGCCACTTA 60.962 57.895 0.00 0.00 0.00 2.24
308 309 1.303091 GCGTTTGACCGGCCACTTAT 61.303 55.000 0.00 0.00 0.00 1.73
309 310 0.446222 CGTTTGACCGGCCACTTATG 59.554 55.000 0.00 0.00 0.00 1.90
310 311 1.530323 GTTTGACCGGCCACTTATGT 58.470 50.000 0.00 0.00 0.00 2.29
311 312 1.883926 GTTTGACCGGCCACTTATGTT 59.116 47.619 0.00 0.00 0.00 2.71
312 313 2.279935 TTGACCGGCCACTTATGTTT 57.720 45.000 0.00 0.00 0.00 2.83
313 314 3.420300 TTGACCGGCCACTTATGTTTA 57.580 42.857 0.00 0.00 0.00 2.01
314 315 3.420300 TGACCGGCCACTTATGTTTAA 57.580 42.857 0.00 0.00 0.00 1.52
315 316 3.958018 TGACCGGCCACTTATGTTTAAT 58.042 40.909 0.00 0.00 0.00 1.40
316 317 4.337145 TGACCGGCCACTTATGTTTAATT 58.663 39.130 0.00 0.00 0.00 1.40
317 318 5.498393 TGACCGGCCACTTATGTTTAATTA 58.502 37.500 0.00 0.00 0.00 1.40
318 319 6.123651 TGACCGGCCACTTATGTTTAATTAT 58.876 36.000 0.00 0.00 0.00 1.28
319 320 6.038825 TGACCGGCCACTTATGTTTAATTATG 59.961 38.462 0.00 0.00 0.00 1.90
320 321 5.889289 ACCGGCCACTTATGTTTAATTATGT 59.111 36.000 0.00 0.00 0.00 2.29
321 322 6.378848 ACCGGCCACTTATGTTTAATTATGTT 59.621 34.615 0.00 0.00 0.00 2.71
322 323 7.093684 ACCGGCCACTTATGTTTAATTATGTTT 60.094 33.333 0.00 0.00 0.00 2.83
323 324 8.407064 CCGGCCACTTATGTTTAATTATGTTTA 58.593 33.333 2.24 0.00 0.00 2.01
324 325 9.959749 CGGCCACTTATGTTTAATTATGTTTAT 57.040 29.630 2.24 0.00 0.00 1.40
350 351 9.790389 TTTTTATGTTTATTTCGTGTGAGTTGT 57.210 25.926 0.00 0.00 0.00 3.32
351 352 9.790389 TTTTATGTTTATTTCGTGTGAGTTGTT 57.210 25.926 0.00 0.00 0.00 2.83
352 353 9.790389 TTTATGTTTATTTCGTGTGAGTTGTTT 57.210 25.926 0.00 0.00 0.00 2.83
353 354 9.790389 TTATGTTTATTTCGTGTGAGTTGTTTT 57.210 25.926 0.00 0.00 0.00 2.43
354 355 8.696410 ATGTTTATTTCGTGTGAGTTGTTTTT 57.304 26.923 0.00 0.00 0.00 1.94
375 376 6.865834 TTTTTCATGCTGGTATATTTGGGT 57.134 33.333 0.00 0.00 0.00 4.51
376 377 6.463995 TTTTCATGCTGGTATATTTGGGTC 57.536 37.500 0.00 0.00 0.00 4.46
377 378 3.738982 TCATGCTGGTATATTTGGGTCG 58.261 45.455 0.00 0.00 0.00 4.79
378 379 2.631160 TGCTGGTATATTTGGGTCGG 57.369 50.000 0.00 0.00 0.00 4.79
379 380 1.235724 GCTGGTATATTTGGGTCGGC 58.764 55.000 0.00 0.00 0.00 5.54
380 381 1.892209 CTGGTATATTTGGGTCGGCC 58.108 55.000 0.00 0.00 0.00 6.13
381 382 1.420138 CTGGTATATTTGGGTCGGCCT 59.580 52.381 5.77 0.00 34.45 5.19
382 383 1.418637 TGGTATATTTGGGTCGGCCTC 59.581 52.381 5.77 0.00 34.45 4.70
383 384 1.271217 GGTATATTTGGGTCGGCCTCC 60.271 57.143 5.77 2.82 34.45 4.30
384 385 1.697982 GTATATTTGGGTCGGCCTCCT 59.302 52.381 5.77 0.00 34.45 3.69
385 386 0.765510 ATATTTGGGTCGGCCTCCTC 59.234 55.000 5.77 0.00 34.45 3.71
386 387 1.682451 TATTTGGGTCGGCCTCCTCG 61.682 60.000 5.77 0.00 34.45 4.63
389 390 2.757099 GGGTCGGCCTCCTCGTTA 60.757 66.667 5.77 0.00 34.45 3.18
390 391 2.783288 GGGTCGGCCTCCTCGTTAG 61.783 68.421 5.77 0.00 34.45 2.34
391 392 1.751927 GGTCGGCCTCCTCGTTAGA 60.752 63.158 0.00 0.00 0.00 2.10
392 393 1.432657 GTCGGCCTCCTCGTTAGAC 59.567 63.158 0.00 0.00 0.00 2.59
393 394 1.001764 TCGGCCTCCTCGTTAGACA 60.002 57.895 0.00 0.00 0.00 3.41
394 395 1.030488 TCGGCCTCCTCGTTAGACAG 61.030 60.000 0.00 0.00 0.00 3.51
395 396 1.313812 CGGCCTCCTCGTTAGACAGT 61.314 60.000 0.00 0.00 0.00 3.55
396 397 0.456628 GGCCTCCTCGTTAGACAGTC 59.543 60.000 0.00 0.00 0.00 3.51
397 398 1.174783 GCCTCCTCGTTAGACAGTCA 58.825 55.000 2.66 0.00 0.00 3.41
398 399 1.544691 GCCTCCTCGTTAGACAGTCAA 59.455 52.381 2.66 0.00 0.00 3.18
399 400 2.029290 GCCTCCTCGTTAGACAGTCAAA 60.029 50.000 2.66 0.00 0.00 2.69
400 401 3.576648 CCTCCTCGTTAGACAGTCAAAC 58.423 50.000 2.66 0.00 0.00 2.93
401 402 3.576648 CTCCTCGTTAGACAGTCAAACC 58.423 50.000 2.66 0.00 0.00 3.27
402 403 2.030540 TCCTCGTTAGACAGTCAAACCG 60.031 50.000 2.66 0.00 0.00 4.44
403 404 2.030540 CCTCGTTAGACAGTCAAACCGA 60.031 50.000 2.66 4.15 0.00 4.69
404 405 3.367087 CCTCGTTAGACAGTCAAACCGAT 60.367 47.826 2.66 0.00 0.00 4.18
405 406 3.829948 TCGTTAGACAGTCAAACCGATC 58.170 45.455 2.66 0.00 0.00 3.69
406 407 2.921754 CGTTAGACAGTCAAACCGATCC 59.078 50.000 2.66 0.00 0.00 3.36
407 408 3.613193 CGTTAGACAGTCAAACCGATCCA 60.613 47.826 2.66 0.00 0.00 3.41
408 409 4.504858 GTTAGACAGTCAAACCGATCCAT 58.495 43.478 2.66 0.00 0.00 3.41
409 410 5.657474 GTTAGACAGTCAAACCGATCCATA 58.343 41.667 2.66 0.00 0.00 2.74
410 411 6.281405 GTTAGACAGTCAAACCGATCCATAT 58.719 40.000 2.66 0.00 0.00 1.78
411 412 5.359194 AGACAGTCAAACCGATCCATATT 57.641 39.130 2.66 0.00 0.00 1.28
412 413 6.479972 AGACAGTCAAACCGATCCATATTA 57.520 37.500 2.66 0.00 0.00 0.98
413 414 6.884832 AGACAGTCAAACCGATCCATATTAA 58.115 36.000 2.66 0.00 0.00 1.40
414 415 7.335627 AGACAGTCAAACCGATCCATATTAAA 58.664 34.615 2.66 0.00 0.00 1.52
415 416 7.827236 AGACAGTCAAACCGATCCATATTAAAA 59.173 33.333 2.66 0.00 0.00 1.52
416 417 8.519799 ACAGTCAAACCGATCCATATTAAAAT 57.480 30.769 0.00 0.00 0.00 1.82
417 418 9.621629 ACAGTCAAACCGATCCATATTAAAATA 57.378 29.630 0.00 0.00 0.00 1.40
418 419 9.878599 CAGTCAAACCGATCCATATTAAAATAC 57.121 33.333 0.00 0.00 0.00 1.89
419 420 8.770828 AGTCAAACCGATCCATATTAAAATACG 58.229 33.333 0.00 0.00 0.00 3.06
420 421 8.013378 GTCAAACCGATCCATATTAAAATACGG 58.987 37.037 0.00 0.00 42.78 4.02
421 422 7.932491 TCAAACCGATCCATATTAAAATACGGA 59.068 33.333 0.00 7.59 37.61 4.69
422 423 7.662604 AACCGATCCATATTAAAATACGGAC 57.337 36.000 0.00 3.14 36.21 4.79
423 424 5.865552 ACCGATCCATATTAAAATACGGACG 59.134 40.000 0.00 11.44 36.21 4.79
424 425 5.220340 CCGATCCATATTAAAATACGGACGC 60.220 44.000 0.00 0.00 36.21 5.19
425 426 5.498069 CGATCCATATTAAAATACGGACGCG 60.498 44.000 3.53 3.53 36.21 6.01
426 427 4.619973 TCCATATTAAAATACGGACGCGT 58.380 39.130 13.85 13.85 29.01 6.01
427 428 5.767269 TCCATATTAAAATACGGACGCGTA 58.233 37.500 13.97 0.00 29.01 4.42
428 429 5.629020 TCCATATTAAAATACGGACGCGTAC 59.371 40.000 13.97 13.29 29.01 3.67
429 430 5.630680 CCATATTAAAATACGGACGCGTACT 59.369 40.000 21.13 9.27 0.00 2.73
430 431 6.183359 CCATATTAAAATACGGACGCGTACTC 60.183 42.308 21.13 8.26 0.00 2.59
431 432 1.538276 AAAATACGGACGCGTACTCG 58.462 50.000 21.13 21.46 40.37 4.18
432 433 0.447801 AAATACGGACGCGTACTCGT 59.552 50.000 28.12 28.12 46.38 4.18
438 439 4.112341 ACGCGTACTCGTCTGGCC 62.112 66.667 11.67 0.00 38.44 5.36
440 441 3.807538 GCGTACTCGTCTGGCCGA 61.808 66.667 0.00 0.00 39.49 5.54
441 442 2.099831 CGTACTCGTCTGGCCGAC 59.900 66.667 15.15 15.15 39.33 4.79
442 443 2.488820 GTACTCGTCTGGCCGACC 59.511 66.667 18.07 4.38 39.56 4.79
443 444 2.753043 TACTCGTCTGGCCGACCC 60.753 66.667 18.07 0.00 39.56 4.46
444 445 3.572447 TACTCGTCTGGCCGACCCA 62.572 63.158 18.07 7.62 42.79 4.51
445 446 3.691342 CTCGTCTGGCCGACCCAA 61.691 66.667 18.07 6.92 44.81 4.12
446 447 3.234630 CTCGTCTGGCCGACCCAAA 62.235 63.158 18.07 5.03 44.81 3.28
447 448 3.047877 CGTCTGGCCGACCCAAAC 61.048 66.667 18.07 0.34 44.81 2.93
448 449 3.047877 GTCTGGCCGACCCAAACG 61.048 66.667 14.46 0.00 44.81 3.60
449 450 3.235481 TCTGGCCGACCCAAACGA 61.235 61.111 0.00 0.00 44.81 3.85
450 451 2.281208 CTGGCCGACCCAAACGAA 60.281 61.111 0.00 0.00 44.81 3.85
451 452 1.674322 CTGGCCGACCCAAACGAAT 60.674 57.895 0.00 0.00 44.81 3.34
452 453 0.391927 CTGGCCGACCCAAACGAATA 60.392 55.000 0.00 0.00 44.81 1.75
453 454 0.036448 TGGCCGACCCAAACGAATAA 59.964 50.000 0.00 0.00 41.82 1.40
454 455 1.166989 GGCCGACCCAAACGAATAAA 58.833 50.000 0.00 0.00 0.00 1.40
455 456 1.540707 GGCCGACCCAAACGAATAAAA 59.459 47.619 0.00 0.00 0.00 1.52
456 457 2.030096 GGCCGACCCAAACGAATAAAAA 60.030 45.455 0.00 0.00 0.00 1.94
471 472 3.713936 AAAAAGGGATAAAGCGCGC 57.286 47.368 26.66 26.66 0.00 6.86
472 473 0.179174 AAAAAGGGATAAAGCGCGCG 60.179 50.000 28.44 28.44 0.00 6.86
473 474 1.303091 AAAAGGGATAAAGCGCGCGT 61.303 50.000 32.35 21.73 0.00 6.01
474 475 1.702491 AAAGGGATAAAGCGCGCGTC 61.702 55.000 32.35 22.88 0.00 5.19
475 476 3.984765 GGGATAAAGCGCGCGTCG 61.985 66.667 32.35 16.61 42.12 5.12
476 477 3.984765 GGATAAAGCGCGCGTCGG 61.985 66.667 32.35 3.13 38.94 4.79
484 485 4.712873 CGCGCGTCGGTTTGGTTC 62.713 66.667 24.19 0.00 33.78 3.62
485 486 4.712873 GCGCGTCGGTTTGGTTCG 62.713 66.667 8.43 0.00 0.00 3.95
486 487 3.332409 CGCGTCGGTTTGGTTCGT 61.332 61.111 0.00 0.00 0.00 3.85
487 488 2.547798 GCGTCGGTTTGGTTCGTC 59.452 61.111 0.00 0.00 0.00 4.20
488 489 1.952635 GCGTCGGTTTGGTTCGTCT 60.953 57.895 0.00 0.00 0.00 4.18
489 490 1.883725 GCGTCGGTTTGGTTCGTCTC 61.884 60.000 0.00 0.00 0.00 3.36
490 491 0.318445 CGTCGGTTTGGTTCGTCTCT 60.318 55.000 0.00 0.00 0.00 3.10
491 492 1.069022 CGTCGGTTTGGTTCGTCTCTA 60.069 52.381 0.00 0.00 0.00 2.43
492 493 2.605338 CGTCGGTTTGGTTCGTCTCTAA 60.605 50.000 0.00 0.00 0.00 2.10
493 494 3.383761 GTCGGTTTGGTTCGTCTCTAAA 58.616 45.455 0.00 0.00 0.00 1.85
494 495 3.183172 GTCGGTTTGGTTCGTCTCTAAAC 59.817 47.826 0.00 0.00 0.00 2.01
495 496 3.125316 CGGTTTGGTTCGTCTCTAAACA 58.875 45.455 13.72 0.00 33.99 2.83
496 497 3.556775 CGGTTTGGTTCGTCTCTAAACAA 59.443 43.478 13.72 0.00 33.99 2.83
497 498 4.212636 CGGTTTGGTTCGTCTCTAAACAAT 59.787 41.667 13.72 0.00 33.75 2.71
498 499 5.449304 GGTTTGGTTCGTCTCTAAACAATG 58.551 41.667 13.72 0.00 33.75 2.82
499 500 5.237779 GGTTTGGTTCGTCTCTAAACAATGA 59.762 40.000 13.72 0.00 33.75 2.57
500 501 6.238538 GGTTTGGTTCGTCTCTAAACAATGAA 60.239 38.462 13.72 0.00 33.75 2.57
501 502 6.928979 TTGGTTCGTCTCTAAACAATGAAA 57.071 33.333 0.00 0.00 28.80 2.69
502 503 7.504924 TTGGTTCGTCTCTAAACAATGAAAT 57.495 32.000 0.00 0.00 28.80 2.17
503 504 7.129109 TGGTTCGTCTCTAAACAATGAAATC 57.871 36.000 0.00 0.00 0.00 2.17
504 505 6.128661 TGGTTCGTCTCTAAACAATGAAATCG 60.129 38.462 0.00 0.00 0.00 3.34
505 506 6.241385 GTTCGTCTCTAAACAATGAAATCGG 58.759 40.000 0.00 0.00 0.00 4.18
506 507 4.868171 TCGTCTCTAAACAATGAAATCGGG 59.132 41.667 0.00 0.00 0.00 5.14
507 508 4.034048 CGTCTCTAAACAATGAAATCGGGG 59.966 45.833 0.00 0.00 0.00 5.73
508 509 3.945285 TCTCTAAACAATGAAATCGGGGC 59.055 43.478 0.00 0.00 0.00 5.80
509 510 3.020984 TCTAAACAATGAAATCGGGGCC 58.979 45.455 0.00 0.00 0.00 5.80
510 511 1.937191 AAACAATGAAATCGGGGCCT 58.063 45.000 0.84 0.00 0.00 5.19
515 516 0.395724 ATGAAATCGGGGCCTGGTTC 60.396 55.000 12.20 15.75 0.00 3.62
517 518 0.748367 GAAATCGGGGCCTGGTTCTC 60.748 60.000 12.20 7.93 0.00 2.87
535 536 1.962807 CTCATCTCGCCAGATTCCTCT 59.037 52.381 0.00 0.00 37.25 3.69
537 538 0.392336 ATCTCGCCAGATTCCTCTGC 59.608 55.000 0.00 0.00 46.39 4.26
558 563 0.806102 CACGGCCGTCGAGATGAAAT 60.806 55.000 31.80 0.00 42.43 2.17
565 570 1.335810 CGTCGAGATGAAATCCCGGTA 59.664 52.381 0.00 0.00 45.26 4.02
567 572 1.961394 TCGAGATGAAATCCCGGTAGG 59.039 52.381 0.00 0.00 45.26 3.18
806 813 4.477413 ACGACACAGGTCTCGTCT 57.523 55.556 0.00 0.00 38.80 4.18
833 840 8.378115 TCTCTACTACTCCAAAGACTACTACT 57.622 38.462 0.00 0.00 0.00 2.57
845 852 3.456644 AGACTACTACTGCTCTGCCTCTA 59.543 47.826 0.00 0.00 0.00 2.43
861 868 3.440173 GCCTCTACATCTCTAGCTAGCTG 59.560 52.174 27.68 16.48 0.00 4.24
931 954 4.077180 GACCCGTCCTCCTCCCCT 62.077 72.222 0.00 0.00 0.00 4.79
932 955 4.077180 ACCCGTCCTCCTCCCCTC 62.077 72.222 0.00 0.00 0.00 4.30
933 956 3.756783 CCCGTCCTCCTCCCCTCT 61.757 72.222 0.00 0.00 0.00 3.69
934 957 2.123640 CCGTCCTCCTCCCCTCTC 60.124 72.222 0.00 0.00 0.00 3.20
935 958 2.123640 CGTCCTCCTCCCCTCTCC 60.124 72.222 0.00 0.00 0.00 3.71
936 959 2.284151 GTCCTCCTCCCCTCTCCC 59.716 72.222 0.00 0.00 0.00 4.30
937 960 3.430497 TCCTCCTCCCCTCTCCCG 61.430 72.222 0.00 0.00 0.00 5.14
1714 1753 0.462047 GCCGAGATCCACCGTGATTT 60.462 55.000 0.00 0.00 0.00 2.17
1744 1783 1.227409 TCGCTGCACTTTTGGACGA 60.227 52.632 0.00 0.00 0.00 4.20
1745 1784 0.602638 TCGCTGCACTTTTGGACGAT 60.603 50.000 0.00 0.00 0.00 3.73
1788 1831 4.715523 ATCCGTGGGTTGGTGGCG 62.716 66.667 0.00 0.00 0.00 5.69
1971 2017 8.774890 TCGGTAGTATGTCTCTTGATATAGTC 57.225 38.462 0.00 0.00 33.74 2.59
2103 2703 2.753296 TGCTGTTGCCAAAAATAGTGC 58.247 42.857 0.00 0.00 38.71 4.40
2284 3007 2.488355 CAGCTCATTTGGCGGCAG 59.512 61.111 12.87 0.14 34.52 4.85
2285 3008 2.034687 AGCTCATTTGGCGGCAGT 59.965 55.556 12.87 1.95 34.52 4.40
2287 3010 0.745845 AGCTCATTTGGCGGCAGTAG 60.746 55.000 12.87 9.44 34.52 2.57
2288 3011 1.026718 GCTCATTTGGCGGCAGTAGT 61.027 55.000 12.87 0.00 0.00 2.73
2289 3012 1.742411 GCTCATTTGGCGGCAGTAGTA 60.742 52.381 12.87 0.00 0.00 1.82
2290 3013 2.838736 CTCATTTGGCGGCAGTAGTAT 58.161 47.619 12.87 0.00 0.00 2.12
2291 3014 3.206150 CTCATTTGGCGGCAGTAGTATT 58.794 45.455 12.87 0.00 0.00 1.89
2448 3178 8.717717 TGTCCATTTCTGTTCCATATCTCTTAT 58.282 33.333 0.00 0.00 0.00 1.73
2525 3255 5.402867 GCTGTAAATCTATGCTCGGTTCTAC 59.597 44.000 0.00 0.00 0.00 2.59
2679 3634 3.947834 GCACCTAGTCTTTGTTGCCATAT 59.052 43.478 0.00 0.00 0.00 1.78
2778 3737 4.528920 AGCCACCAAACAGTTGTAACTTA 58.471 39.130 0.00 0.00 37.08 2.24
2781 3740 5.009210 GCCACCAAACAGTTGTAACTTATGA 59.991 40.000 0.00 0.00 37.08 2.15
2869 3828 9.119418 TCTATCTGTTTCTTGTTGATTTGTTCA 57.881 29.630 0.00 0.00 0.00 3.18
2872 3831 8.275015 TCTGTTTCTTGTTGATTTGTTCACTA 57.725 30.769 0.00 0.00 32.84 2.74
2986 3945 1.714899 AACACGTGTCCTTGCAGCAC 61.715 55.000 23.61 0.00 0.00 4.40
2987 3946 1.889105 CACGTGTCCTTGCAGCACT 60.889 57.895 7.58 0.00 0.00 4.40
3041 4000 5.242434 AGCCATCTGAAAATGTGTAACGTA 58.758 37.500 0.00 0.00 42.39 3.57
3458 4419 6.403866 TTTTATCCTTCAGCTTTGCTTTCA 57.596 33.333 0.00 0.00 36.40 2.69
3519 4489 0.744414 TGGCACAAGCTATCCTTCGC 60.744 55.000 0.00 0.00 41.70 4.70
3618 4588 1.826385 CTGACCCGAAAATCAGGCTT 58.174 50.000 0.00 0.00 38.97 4.35
3670 4640 5.373222 ACATAGTGGTAGTGCTTTCAAACA 58.627 37.500 0.00 0.00 0.00 2.83
3709 4845 9.567776 TGTTAGTTTCAATATCCTCAAAGTTCA 57.432 29.630 0.00 0.00 0.00 3.18
3747 4883 4.039004 TGCGTAAGTTCCTACTGTTTGGTA 59.961 41.667 0.00 0.00 41.68 3.25
3768 4904 3.555966 ACTGCTTTAAACTTCAGCCTGT 58.444 40.909 0.00 0.00 32.11 4.00
3769 4905 3.565902 ACTGCTTTAAACTTCAGCCTGTC 59.434 43.478 0.00 0.00 32.11 3.51
3800 4937 6.360844 TCATGTTTTGTTTTTCAATGGCAG 57.639 33.333 0.00 0.00 35.84 4.85
3905 5042 4.758674 CCAACCATATCCTGATGTCATGTC 59.241 45.833 0.00 0.00 0.00 3.06
3911 5048 7.163441 CCATATCCTGATGTCATGTCATGTAA 58.837 38.462 10.26 3.03 0.00 2.41
3943 5216 3.002348 GCTATGCGGTAAATCTGTTGTCC 59.998 47.826 0.00 0.00 0.00 4.02
3980 5253 4.043310 ACTCAGATCAATTTGAAGGACCCA 59.957 41.667 2.68 0.00 0.00 4.51
4035 5308 4.908601 TCCACTTTGAATCCTTGCTCTA 57.091 40.909 0.00 0.00 0.00 2.43
4092 5941 4.890158 TTGACTTCTGTAAGCTGGATGA 57.110 40.909 0.00 0.00 36.05 2.92
4252 6101 1.135141 TGAAACACAGTTGCAAGCACC 60.135 47.619 0.00 0.00 0.00 5.01
4260 6109 1.531128 TTGCAAGCACCAGATGGCA 60.531 52.632 0.00 0.00 39.32 4.92
4272 6121 2.295349 CCAGATGGCAATTACATGGAGC 59.705 50.000 0.00 0.00 0.00 4.70
4277 6126 1.202177 GGCAATTACATGGAGCGTGTG 60.202 52.381 0.00 0.00 35.12 3.82
4278 6127 1.795162 GCAATTACATGGAGCGTGTGC 60.795 52.381 0.00 0.00 43.24 4.57
4326 6190 6.424812 CGATTATTCAAGACATGGACAGCATA 59.575 38.462 0.00 0.00 0.00 3.14
4343 6207 7.380602 GGACAGCATAATATTGATTTTGCACTC 59.619 37.037 13.21 7.96 46.53 3.51
4390 6254 6.759497 ATTTTAGCAAAATAGACGAAGCCT 57.241 33.333 0.00 0.00 39.21 4.58
4399 6263 8.395633 GCAAAATAGACGAAGCCTAATTTCTTA 58.604 33.333 0.00 0.00 0.00 2.10
4437 6301 8.397906 TCATGTTCTAACATTTAAGCTACATGC 58.602 33.333 5.60 0.00 46.95 4.06
4455 6319 3.034721 TGCGTTCCTTCTTACAATCGT 57.965 42.857 0.00 0.00 0.00 3.73
4473 6338 1.308998 GTGGATGCCTATTGAACCGG 58.691 55.000 0.00 0.00 0.00 5.28
4479 6344 1.270094 TGCCTATTGAACCGGCTATCG 60.270 52.381 0.00 0.00 44.09 2.92
4484 6349 2.754946 TTGAACCGGCTATCGAAGTT 57.245 45.000 0.00 0.00 42.43 2.66
4486 6351 2.613691 TGAACCGGCTATCGAAGTTTC 58.386 47.619 0.00 0.00 42.43 2.78
4495 6360 5.228665 GGCTATCGAAGTTTCCCATACTAC 58.771 45.833 0.00 0.00 0.00 2.73
4514 6379 1.777878 ACCCACCAGTTATCCACACAA 59.222 47.619 0.00 0.00 0.00 3.33
4524 6389 6.238374 CCAGTTATCCACACAATTAATCGACC 60.238 42.308 0.00 0.00 0.00 4.79
4631 6560 3.196039 AGCATACATGGCTTCAAAATGCA 59.804 39.130 0.00 0.00 38.81 3.96
4664 6593 4.397417 CCAAATGTTCCTCTTGGAGACATC 59.603 45.833 10.74 0.00 44.24 3.06
4682 6611 4.385825 ACATCGTAAAGTCAAGGCTGAAA 58.614 39.130 0.00 0.00 31.88 2.69
4746 6675 5.540719 AGGGTTTGAATTTCGTTTTCCCATA 59.459 36.000 13.38 0.00 35.31 2.74
4752 6681 9.547753 TTTGAATTTCGTTTTCCCATAAATTGA 57.452 25.926 0.00 0.00 31.70 2.57
4760 6689 8.768955 TCGTTTTCCCATAAATTGAATTTTGTG 58.231 29.630 8.60 8.27 33.82 3.33
4761 6690 8.555361 CGTTTTCCCATAAATTGAATTTTGTGT 58.445 29.630 8.60 0.00 33.82 3.72
4765 6694 7.610865 TCCCATAAATTGAATTTTGTGTCCTC 58.389 34.615 8.60 0.00 33.82 3.71
4947 6881 2.303022 TGAAGAGTTGAAGAGCGGGATT 59.697 45.455 0.00 0.00 0.00 3.01
5023 6957 8.494016 AGCTGTAAGTAATGTACAGGATTTTC 57.506 34.615 12.22 0.00 45.70 2.29
5037 6971 6.280643 ACAGGATTTTCCTTGCTTGTTAAAC 58.719 36.000 0.00 0.00 46.91 2.01
5066 7000 9.435570 TTCAGTTAGATTAACTTAGCCTATCCT 57.564 33.333 0.00 0.00 46.27 3.24
5069 7003 9.435570 AGTTAGATTAACTTAGCCTATCCTTGA 57.564 33.333 0.00 0.00 46.27 3.02
5105 7043 9.199982 ACTGAATGACATTATTTCTGCAAAAAG 57.800 29.630 0.00 0.00 0.00 2.27
5145 7083 4.686972 CTCTTCTATTGCTCGATCAACCA 58.313 43.478 3.42 0.00 0.00 3.67
5149 7087 4.433615 TCTATTGCTCGATCAACCAGAAC 58.566 43.478 3.42 0.00 0.00 3.01
5206 7144 8.980481 CCAGATGGGTAGAAGTATTGTAAATT 57.020 34.615 0.00 0.00 0.00 1.82
5223 7161 6.342111 TGTAAATTGTGGTCCCTTTTTGAAC 58.658 36.000 0.00 0.00 0.00 3.18
5250 7188 6.839134 AGTTTAGTTCTTGGGACCTTGAAAAT 59.161 34.615 0.00 0.00 0.00 1.82
5266 7299 8.914011 ACCTTGAAAATTAGCAATAAGGGATAC 58.086 33.333 0.00 0.00 37.97 2.24
5384 7577 7.370383 TCATGGCTAACATTTTTCTGAAGTTC 58.630 34.615 0.00 0.00 37.84 3.01
5416 7609 5.911752 ACAGGTTGAACATATAGAGCTCAG 58.088 41.667 17.77 2.61 0.00 3.35
5504 7699 7.366847 AGAGTATACCACTATTGCTTGTGAT 57.633 36.000 0.00 0.00 37.72 3.06
5558 7765 2.833794 TGGCTTGACTTGTGTAGTGTC 58.166 47.619 0.00 0.00 37.17 3.67
5560 7767 2.224305 GGCTTGACTTGTGTAGTGTCCT 60.224 50.000 0.00 0.00 37.17 3.85
5561 7768 3.060602 GCTTGACTTGTGTAGTGTCCTC 58.939 50.000 0.00 0.00 37.17 3.71
5562 7769 3.243907 GCTTGACTTGTGTAGTGTCCTCT 60.244 47.826 0.00 0.00 37.17 3.69
5564 7771 5.704888 CTTGACTTGTGTAGTGTCCTCTAG 58.295 45.833 0.00 0.00 37.17 2.43
5566 7773 5.872963 TGACTTGTGTAGTGTCCTCTAGTA 58.127 41.667 0.00 0.00 37.17 1.82
5568 7775 6.946583 TGACTTGTGTAGTGTCCTCTAGTATT 59.053 38.462 0.00 0.00 37.17 1.89
5569 7776 7.450634 TGACTTGTGTAGTGTCCTCTAGTATTT 59.549 37.037 0.00 0.00 37.17 1.40
5570 7777 8.874744 ACTTGTGTAGTGTCCTCTAGTATTTA 57.125 34.615 0.00 0.00 35.19 1.40
5572 7779 8.640063 TTGTGTAGTGTCCTCTAGTATTTACA 57.360 34.615 0.00 0.00 0.00 2.41
5609 7816 9.234384 GTTGAAGATTTGCATATCTGATCTTTG 57.766 33.333 18.75 0.00 37.24 2.77
5813 8871 1.899814 GATGGGGCGGTAGATATCACA 59.100 52.381 5.32 0.00 0.00 3.58
5895 8953 2.757894 TTGCCAAAAGGAGGGTACAA 57.242 45.000 0.00 0.00 0.00 2.41
6119 9177 0.251033 AATCACAGGCTTGCAGCTGA 60.251 50.000 20.43 0.00 41.99 4.26
6273 9332 0.974010 TTTCCCGGTATCGCTGAGGT 60.974 55.000 0.00 0.00 34.56 3.85
6303 9366 1.167851 CACCGAATGATGCACCAACT 58.832 50.000 0.00 0.00 0.00 3.16
6443 9511 4.238514 GTGGTTAAGAGCTAGATATGCCG 58.761 47.826 0.00 0.00 0.00 5.69
6493 9561 5.392767 TTGCTTTCAACTGTACCAAAACA 57.607 34.783 0.00 0.00 0.00 2.83
6504 9572 1.832883 ACCAAAACAGCATATCGCCA 58.167 45.000 0.00 0.00 44.04 5.69
6505 9573 2.166829 ACCAAAACAGCATATCGCCAA 58.833 42.857 0.00 0.00 44.04 4.52
6511 9579 1.233019 CAGCATATCGCCAAGGGAAG 58.767 55.000 0.00 0.00 44.04 3.46
6512 9580 1.131638 AGCATATCGCCAAGGGAAGA 58.868 50.000 0.00 0.00 44.04 2.87
6529 9600 3.672295 GAGGACAAGAGGGCGCCAG 62.672 68.421 30.85 14.37 0.00 4.85
6541 9612 4.760047 CGCCAGGTAGCCGCAACT 62.760 66.667 0.00 0.00 0.00 3.16
6542 9613 2.359975 GCCAGGTAGCCGCAACTT 60.360 61.111 0.00 0.00 0.00 2.66
6606 9678 1.271054 GGAGTGCACCAGATTGTCTGT 60.271 52.381 14.63 0.00 42.80 3.41
6632 9704 1.947013 CTGCTGTGTTGCTGTCTGG 59.053 57.895 0.00 0.00 0.00 3.86
6665 9737 2.967397 CTACGTGCCAAGACGGGA 59.033 61.111 0.00 0.00 43.84 5.14
6704 9776 7.059488 GCAGTTTGTCGTCACAGTATAATTTTG 59.941 37.037 0.00 0.00 32.71 2.44
6727 9799 3.055530 AGAGTTTGCCTGGTCTCATGTAG 60.056 47.826 0.00 0.00 0.00 2.74
6729 9801 3.838317 AGTTTGCCTGGTCTCATGTAGTA 59.162 43.478 0.00 0.00 0.00 1.82
6730 9802 3.887621 TTGCCTGGTCTCATGTAGTAC 57.112 47.619 0.00 0.00 0.00 2.73
6734 9806 3.195825 GCCTGGTCTCATGTAGTACTTGT 59.804 47.826 14.03 0.00 0.00 3.16
6735 9807 4.401519 GCCTGGTCTCATGTAGTACTTGTA 59.598 45.833 14.03 3.84 0.00 2.41
6737 9809 5.450688 CCTGGTCTCATGTAGTACTTGTAGC 60.451 48.000 14.03 13.04 0.00 3.58
6739 9811 4.497674 GGTCTCATGTAGTACTTGTAGCGG 60.498 50.000 14.03 4.01 0.00 5.52
6740 9812 4.096081 GTCTCATGTAGTACTTGTAGCGGT 59.904 45.833 14.03 0.00 0.00 5.68
6741 9813 4.334759 TCTCATGTAGTACTTGTAGCGGTC 59.665 45.833 14.03 0.00 0.00 4.79
6742 9814 3.379372 TCATGTAGTACTTGTAGCGGTCC 59.621 47.826 14.03 0.00 0.00 4.46
6743 9815 2.794103 TGTAGTACTTGTAGCGGTCCA 58.206 47.619 0.00 0.00 0.00 4.02
6744 9816 2.489329 TGTAGTACTTGTAGCGGTCCAC 59.511 50.000 0.00 0.00 0.00 4.02
6745 9817 1.920610 AGTACTTGTAGCGGTCCACT 58.079 50.000 0.00 0.00 0.00 4.00
6746 9818 2.245582 AGTACTTGTAGCGGTCCACTT 58.754 47.619 0.00 0.00 0.00 3.16
6751 9823 3.007614 ACTTGTAGCGGTCCACTTATTGT 59.992 43.478 0.00 0.00 0.00 2.71
6888 9967 1.286354 TTCAGCTACCGCCGTTTTCG 61.286 55.000 0.00 0.00 43.67 3.46
6912 9991 4.457257 AGCGGAGAAGAAAATCAAAAGAGG 59.543 41.667 0.00 0.00 0.00 3.69
6919 9998 3.057245 AGAAAATCAAAAGAGGAAGCGGC 60.057 43.478 0.00 0.00 0.00 6.53
6934 10013 1.289109 GCGGCTTGTTTAGACAGCGA 61.289 55.000 0.00 0.00 37.04 4.93
6937 10016 2.159627 CGGCTTGTTTAGACAGCGAATT 59.840 45.455 0.00 0.00 37.04 2.17
6938 10017 3.369756 CGGCTTGTTTAGACAGCGAATTA 59.630 43.478 0.00 0.00 37.04 1.40
6974 10053 9.581289 TCATTCCAAAGTCCAAACTAATAAAGA 57.419 29.630 0.00 0.00 33.48 2.52
7024 10107 3.134804 ACCAGTGGAGATGTAATAGGTGC 59.865 47.826 18.40 0.00 0.00 5.01
7025 10108 3.134623 CCAGTGGAGATGTAATAGGTGCA 59.865 47.826 1.68 0.00 0.00 4.57
7026 10109 4.375272 CAGTGGAGATGTAATAGGTGCAG 58.625 47.826 0.00 0.00 0.00 4.41
7028 10111 3.134804 GTGGAGATGTAATAGGTGCAGGT 59.865 47.826 0.00 0.00 0.00 4.00
7029 10112 3.388024 TGGAGATGTAATAGGTGCAGGTC 59.612 47.826 0.00 0.00 0.00 3.85
7030 10113 3.643792 GGAGATGTAATAGGTGCAGGTCT 59.356 47.826 0.00 0.00 0.00 3.85
7031 10114 4.502259 GGAGATGTAATAGGTGCAGGTCTG 60.502 50.000 0.00 0.00 0.00 3.51
7032 10115 4.033709 AGATGTAATAGGTGCAGGTCTGT 58.966 43.478 0.00 0.00 0.00 3.41
7048 10132 2.866762 GTCTGTCGAGCTCAAAAACAGT 59.133 45.455 23.67 0.00 38.71 3.55
7049 10133 2.866156 TCTGTCGAGCTCAAAAACAGTG 59.134 45.455 23.67 10.04 38.71 3.66
7071 10155 6.382859 AGTGTTCCCCAAACTTTAATCAGTTT 59.617 34.615 0.34 0.34 46.00 2.66
7089 10176 7.364522 TCAGTTTGTAGTGATTTGAGCATAC 57.635 36.000 0.00 0.00 0.00 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.125552 CGGAGCGCCTTCATGTCA 60.126 61.111 2.29 0.00 0.00 3.58
4 5 4.537433 GAGCCGGAGCGCCTTCAT 62.537 66.667 5.05 0.00 46.67 2.57
6 7 4.760047 TTGAGCCGGAGCGCCTTC 62.760 66.667 5.05 0.00 46.67 3.46
7 8 4.767255 CTTGAGCCGGAGCGCCTT 62.767 66.667 5.05 0.00 46.67 4.35
11 12 4.521062 CCTCCTTGAGCCGGAGCG 62.521 72.222 5.05 0.00 45.37 5.03
12 13 3.077556 TCCTCCTTGAGCCGGAGC 61.078 66.667 5.05 0.00 45.37 4.70
13 14 2.430610 CCTCCTCCTTGAGCCGGAG 61.431 68.421 5.05 0.00 46.11 4.63
14 15 2.364317 CCTCCTCCTTGAGCCGGA 60.364 66.667 5.05 0.00 0.00 5.14
15 16 2.364317 TCCTCCTCCTTGAGCCGG 60.364 66.667 0.00 0.00 0.00 6.13
16 17 2.430610 CCTCCTCCTCCTTGAGCCG 61.431 68.421 0.00 0.00 0.00 5.52
17 18 1.002274 TCCTCCTCCTCCTTGAGCC 59.998 63.158 0.00 0.00 0.00 4.70
18 19 1.048160 CCTCCTCCTCCTCCTTGAGC 61.048 65.000 0.00 0.00 0.00 4.26
19 20 0.633921 TCCTCCTCCTCCTCCTTGAG 59.366 60.000 0.00 0.00 0.00 3.02
20 21 0.633921 CTCCTCCTCCTCCTCCTTGA 59.366 60.000 0.00 0.00 0.00 3.02
21 22 0.398381 CCTCCTCCTCCTCCTCCTTG 60.398 65.000 0.00 0.00 0.00 3.61
22 23 0.556380 TCCTCCTCCTCCTCCTCCTT 60.556 60.000 0.00 0.00 0.00 3.36
23 24 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
24 25 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
25 26 1.152546 GCTCCTCCTCCTCCTCCTC 60.153 68.421 0.00 0.00 0.00 3.71
26 27 3.024217 GCTCCTCCTCCTCCTCCT 58.976 66.667 0.00 0.00 0.00 3.69
27 28 2.520741 CGCTCCTCCTCCTCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
28 29 3.223589 GCGCTCCTCCTCCTCCTC 61.224 72.222 0.00 0.00 0.00 3.71
102 103 4.728102 TGAACGCCGCCTGGTACG 62.728 66.667 0.00 0.00 37.67 3.67
103 104 2.813908 CTGAACGCCGCCTGGTAC 60.814 66.667 0.00 0.00 37.67 3.34
104 105 4.077184 CCTGAACGCCGCCTGGTA 62.077 66.667 0.00 0.00 37.67 3.25
111 112 4.077184 TAGCCCACCTGAACGCCG 62.077 66.667 0.00 0.00 0.00 6.46
112 113 2.125106 CTAGCCCACCTGAACGCC 60.125 66.667 0.00 0.00 0.00 5.68
113 114 2.820037 GCTAGCCCACCTGAACGC 60.820 66.667 2.29 0.00 0.00 4.84
114 115 2.125106 GGCTAGCCCACCTGAACG 60.125 66.667 24.19 0.00 0.00 3.95
125 126 4.228567 GACCGGAGCAGGGCTAGC 62.229 72.222 9.46 6.04 39.88 3.42
129 130 2.932130 GATGAAGACCGGAGCAGGGC 62.932 65.000 9.46 0.00 40.48 5.19
130 131 1.144936 GATGAAGACCGGAGCAGGG 59.855 63.158 9.46 0.00 35.02 4.45
131 132 1.227089 CGATGAAGACCGGAGCAGG 60.227 63.158 9.46 0.00 37.30 4.85
132 133 0.526524 GTCGATGAAGACCGGAGCAG 60.527 60.000 9.46 0.00 35.22 4.24
133 134 1.511305 GTCGATGAAGACCGGAGCA 59.489 57.895 9.46 0.00 35.22 4.26
134 135 4.403976 GTCGATGAAGACCGGAGC 57.596 61.111 9.46 0.00 35.22 4.70
140 141 0.809385 TCGGTGAGGTCGATGAAGAC 59.191 55.000 0.00 0.00 40.25 3.01
141 142 0.809385 GTCGGTGAGGTCGATGAAGA 59.191 55.000 0.00 0.00 38.93 2.87
142 143 0.523546 CGTCGGTGAGGTCGATGAAG 60.524 60.000 0.00 0.00 43.83 3.02
143 144 0.956902 TCGTCGGTGAGGTCGATGAA 60.957 55.000 6.01 0.00 45.76 2.57
144 145 1.376295 TCGTCGGTGAGGTCGATGA 60.376 57.895 4.56 4.56 46.30 2.92
145 146 1.226323 GTCGTCGGTGAGGTCGATG 60.226 63.158 0.00 0.00 42.86 3.84
146 147 2.747822 CGTCGTCGGTGAGGTCGAT 61.748 63.158 0.00 0.00 38.93 3.59
147 148 3.417224 CGTCGTCGGTGAGGTCGA 61.417 66.667 0.00 0.00 32.80 4.20
169 170 2.355363 TTGCCCTTGACGTCGACG 60.355 61.111 34.58 34.58 46.33 5.12
170 171 2.027625 CCTTGCCCTTGACGTCGAC 61.028 63.158 11.62 5.18 0.00 4.20
171 172 2.342279 CCTTGCCCTTGACGTCGA 59.658 61.111 11.62 8.40 0.00 4.20
172 173 3.423154 GCCTTGCCCTTGACGTCG 61.423 66.667 11.62 0.00 0.00 5.12
173 174 2.032681 AGCCTTGCCCTTGACGTC 59.967 61.111 9.11 9.11 0.00 4.34
174 175 2.281761 CAGCCTTGCCCTTGACGT 60.282 61.111 0.00 0.00 0.00 4.34
175 176 2.032528 TCAGCCTTGCCCTTGACG 59.967 61.111 0.00 0.00 0.00 4.35
176 177 2.328099 CGTCAGCCTTGCCCTTGAC 61.328 63.158 0.00 0.00 37.24 3.18
177 178 2.032528 CGTCAGCCTTGCCCTTGA 59.967 61.111 0.00 0.00 0.00 3.02
178 179 2.032528 TCGTCAGCCTTGCCCTTG 59.967 61.111 0.00 0.00 0.00 3.61
179 180 2.032681 GTCGTCAGCCTTGCCCTT 59.967 61.111 0.00 0.00 0.00 3.95
180 181 4.379243 CGTCGTCAGCCTTGCCCT 62.379 66.667 0.00 0.00 0.00 5.19
181 182 4.681978 ACGTCGTCAGCCTTGCCC 62.682 66.667 0.00 0.00 0.00 5.36
182 183 2.209064 TAGACGTCGTCAGCCTTGCC 62.209 60.000 26.17 0.00 34.60 4.52
183 184 0.798771 CTAGACGTCGTCAGCCTTGC 60.799 60.000 26.17 0.00 34.60 4.01
184 185 0.179161 CCTAGACGTCGTCAGCCTTG 60.179 60.000 26.17 7.38 34.60 3.61
185 186 1.313812 CCCTAGACGTCGTCAGCCTT 61.314 60.000 26.17 8.60 34.60 4.35
186 187 1.749638 CCCTAGACGTCGTCAGCCT 60.750 63.158 26.17 8.98 34.60 4.58
187 188 2.799371 CCCTAGACGTCGTCAGCC 59.201 66.667 26.17 0.63 34.60 4.85
188 189 2.102553 GCCCTAGACGTCGTCAGC 59.897 66.667 26.17 18.30 34.60 4.26
189 190 1.429825 CTGCCCTAGACGTCGTCAG 59.570 63.158 26.17 19.34 34.60 3.51
190 191 2.697761 GCTGCCCTAGACGTCGTCA 61.698 63.158 26.17 11.86 34.60 4.35
191 192 2.102553 GCTGCCCTAGACGTCGTC 59.897 66.667 17.70 17.70 0.00 4.20
192 193 3.812019 CGCTGCCCTAGACGTCGT 61.812 66.667 10.46 0.00 0.00 4.34
193 194 3.812019 ACGCTGCCCTAGACGTCG 61.812 66.667 10.46 0.00 35.33 5.12
194 195 2.202623 CACGCTGCCCTAGACGTC 60.203 66.667 7.70 7.70 37.16 4.34
195 196 4.436998 GCACGCTGCCCTAGACGT 62.437 66.667 0.00 0.00 37.42 4.34
220 221 4.389576 GTTTGCGCCCGTCTGCTG 62.390 66.667 4.18 0.00 0.00 4.41
221 222 4.626081 AGTTTGCGCCCGTCTGCT 62.626 61.111 4.18 0.00 0.00 4.24
222 223 2.677573 AAAAGTTTGCGCCCGTCTGC 62.678 55.000 4.18 0.00 0.00 4.26
223 224 0.248866 AAAAAGTTTGCGCCCGTCTG 60.249 50.000 4.18 0.00 0.00 3.51
224 225 2.112029 AAAAAGTTTGCGCCCGTCT 58.888 47.368 4.18 0.00 0.00 4.18
225 226 4.722008 AAAAAGTTTGCGCCCGTC 57.278 50.000 4.18 0.00 0.00 4.79
263 264 9.063615 CCGGCCAAAGTCTACTTAAATATAATT 57.936 33.333 2.24 0.00 34.61 1.40
264 265 7.174426 GCCGGCCAAAGTCTACTTAAATATAAT 59.826 37.037 18.11 0.00 34.61 1.28
265 266 6.484308 GCCGGCCAAAGTCTACTTAAATATAA 59.516 38.462 18.11 0.00 34.61 0.98
266 267 5.993441 GCCGGCCAAAGTCTACTTAAATATA 59.007 40.000 18.11 0.00 34.61 0.86
267 268 4.820173 GCCGGCCAAAGTCTACTTAAATAT 59.180 41.667 18.11 0.00 34.61 1.28
268 269 4.193865 GCCGGCCAAAGTCTACTTAAATA 58.806 43.478 18.11 0.00 34.61 1.40
269 270 3.014623 GCCGGCCAAAGTCTACTTAAAT 58.985 45.455 18.11 0.00 34.61 1.40
270 271 2.429478 GCCGGCCAAAGTCTACTTAAA 58.571 47.619 18.11 0.00 34.61 1.52
271 272 1.673626 CGCCGGCCAAAGTCTACTTAA 60.674 52.381 23.46 0.00 34.61 1.85
272 273 0.108520 CGCCGGCCAAAGTCTACTTA 60.109 55.000 23.46 0.00 34.61 2.24
273 274 1.375523 CGCCGGCCAAAGTCTACTT 60.376 57.895 23.46 0.00 37.91 2.24
274 275 2.108278 AACGCCGGCCAAAGTCTACT 62.108 55.000 23.46 0.00 0.00 2.57
275 276 1.232621 AAACGCCGGCCAAAGTCTAC 61.233 55.000 23.46 0.00 0.00 2.59
276 277 1.071814 AAACGCCGGCCAAAGTCTA 59.928 52.632 23.46 0.00 0.00 2.59
277 278 2.203294 AAACGCCGGCCAAAGTCT 60.203 55.556 23.46 0.00 0.00 3.24
278 279 2.050442 CAAACGCCGGCCAAAGTC 60.050 61.111 23.46 0.00 0.00 3.01
279 280 2.517402 TCAAACGCCGGCCAAAGT 60.517 55.556 23.46 10.32 0.00 2.66
280 281 2.050442 GTCAAACGCCGGCCAAAG 60.050 61.111 23.46 9.53 0.00 2.77
281 282 3.597728 GGTCAAACGCCGGCCAAA 61.598 61.111 23.46 0.00 0.00 3.28
289 290 1.303091 ATAAGTGGCCGGTCAAACGC 61.303 55.000 12.16 0.00 0.00 4.84
290 291 0.446222 CATAAGTGGCCGGTCAAACG 59.554 55.000 12.16 0.00 0.00 3.60
291 292 1.530323 ACATAAGTGGCCGGTCAAAC 58.470 50.000 12.16 0.00 0.00 2.93
292 293 2.279935 AACATAAGTGGCCGGTCAAA 57.720 45.000 12.16 0.00 0.00 2.69
293 294 2.279935 AAACATAAGTGGCCGGTCAA 57.720 45.000 12.16 0.00 0.00 3.18
294 295 3.420300 TTAAACATAAGTGGCCGGTCA 57.580 42.857 3.51 3.51 0.00 4.02
295 296 4.976224 AATTAAACATAAGTGGCCGGTC 57.024 40.909 0.00 0.00 0.00 4.79
296 297 5.889289 ACATAATTAAACATAAGTGGCCGGT 59.111 36.000 1.90 0.00 0.00 5.28
297 298 6.385649 ACATAATTAAACATAAGTGGCCGG 57.614 37.500 0.00 0.00 0.00 6.13
298 299 9.959749 ATAAACATAATTAAACATAAGTGGCCG 57.040 29.630 0.00 0.00 0.00 6.13
324 325 9.790389 ACAACTCACACGAAATAAACATAAAAA 57.210 25.926 0.00 0.00 0.00 1.94
325 326 9.790389 AACAACTCACACGAAATAAACATAAAA 57.210 25.926 0.00 0.00 0.00 1.52
326 327 9.790389 AAACAACTCACACGAAATAAACATAAA 57.210 25.926 0.00 0.00 0.00 1.40
327 328 9.790389 AAAACAACTCACACGAAATAAACATAA 57.210 25.926 0.00 0.00 0.00 1.90
328 329 9.790389 AAAAACAACTCACACGAAATAAACATA 57.210 25.926 0.00 0.00 0.00 2.29
329 330 8.696410 AAAAACAACTCACACGAAATAAACAT 57.304 26.923 0.00 0.00 0.00 2.71
352 353 6.405286 CGACCCAAATATACCAGCATGAAAAA 60.405 38.462 0.00 0.00 39.69 1.94
353 354 5.067153 CGACCCAAATATACCAGCATGAAAA 59.933 40.000 0.00 0.00 39.69 2.29
354 355 4.578516 CGACCCAAATATACCAGCATGAAA 59.421 41.667 0.00 0.00 39.69 2.69
355 356 4.133820 CGACCCAAATATACCAGCATGAA 58.866 43.478 0.00 0.00 39.69 2.57
356 357 3.495983 CCGACCCAAATATACCAGCATGA 60.496 47.826 0.00 0.00 39.69 3.07
357 358 2.813754 CCGACCCAAATATACCAGCATG 59.186 50.000 0.00 0.00 0.00 4.06
358 359 2.814097 GCCGACCCAAATATACCAGCAT 60.814 50.000 0.00 0.00 0.00 3.79
359 360 1.476110 GCCGACCCAAATATACCAGCA 60.476 52.381 0.00 0.00 0.00 4.41
360 361 1.235724 GCCGACCCAAATATACCAGC 58.764 55.000 0.00 0.00 0.00 4.85
361 362 1.420138 AGGCCGACCCAAATATACCAG 59.580 52.381 0.00 0.00 36.11 4.00
362 363 1.418637 GAGGCCGACCCAAATATACCA 59.581 52.381 0.00 0.00 36.11 3.25
363 364 1.271217 GGAGGCCGACCCAAATATACC 60.271 57.143 10.32 0.00 36.11 2.73
364 365 1.697982 AGGAGGCCGACCCAAATATAC 59.302 52.381 16.41 0.00 36.11 1.47
365 366 1.975680 GAGGAGGCCGACCCAAATATA 59.024 52.381 16.41 0.00 36.11 0.86
366 367 0.765510 GAGGAGGCCGACCCAAATAT 59.234 55.000 16.41 0.00 36.11 1.28
367 368 1.682451 CGAGGAGGCCGACCCAAATA 61.682 60.000 16.41 0.00 36.11 1.40
368 369 2.998949 GAGGAGGCCGACCCAAAT 59.001 61.111 16.41 0.55 36.11 2.32
369 370 3.702048 CGAGGAGGCCGACCCAAA 61.702 66.667 16.41 0.00 36.11 3.28
371 372 3.588817 TAACGAGGAGGCCGACCCA 62.589 63.158 16.41 0.00 36.11 4.51
372 373 2.757099 TAACGAGGAGGCCGACCC 60.757 66.667 16.41 10.52 36.11 4.46
373 374 1.751927 TCTAACGAGGAGGCCGACC 60.752 63.158 13.01 13.01 0.00 4.79
374 375 1.310933 TGTCTAACGAGGAGGCCGAC 61.311 60.000 0.00 0.00 0.00 4.79
375 376 1.001764 TGTCTAACGAGGAGGCCGA 60.002 57.895 0.00 0.00 0.00 5.54
376 377 1.313812 ACTGTCTAACGAGGAGGCCG 61.314 60.000 0.00 0.00 0.00 6.13
377 378 0.456628 GACTGTCTAACGAGGAGGCC 59.543 60.000 0.00 0.00 0.00 5.19
378 379 1.174783 TGACTGTCTAACGAGGAGGC 58.825 55.000 9.51 0.00 0.00 4.70
379 380 3.576648 GTTTGACTGTCTAACGAGGAGG 58.423 50.000 16.86 0.00 0.00 4.30
380 381 3.576648 GGTTTGACTGTCTAACGAGGAG 58.423 50.000 22.35 0.00 33.88 3.69
381 382 2.030540 CGGTTTGACTGTCTAACGAGGA 60.031 50.000 22.35 0.00 33.88 3.71
382 383 2.030540 TCGGTTTGACTGTCTAACGAGG 60.031 50.000 22.35 16.12 33.88 4.63
383 384 3.278367 TCGGTTTGACTGTCTAACGAG 57.722 47.619 22.35 19.20 33.88 4.18
384 385 3.366679 GGATCGGTTTGACTGTCTAACGA 60.367 47.826 22.35 21.15 33.88 3.85
385 386 2.921754 GGATCGGTTTGACTGTCTAACG 59.078 50.000 22.35 17.57 33.88 3.18
386 387 3.921677 TGGATCGGTTTGACTGTCTAAC 58.078 45.455 21.54 21.54 32.64 2.34
387 388 4.819105 ATGGATCGGTTTGACTGTCTAA 57.181 40.909 9.51 4.92 0.00 2.10
388 389 6.479972 AATATGGATCGGTTTGACTGTCTA 57.520 37.500 9.51 0.00 0.00 2.59
389 390 5.359194 AATATGGATCGGTTTGACTGTCT 57.641 39.130 9.51 0.00 0.00 3.41
390 391 7.548196 TTTAATATGGATCGGTTTGACTGTC 57.452 36.000 0.00 0.00 0.00 3.51
391 392 7.931578 TTTTAATATGGATCGGTTTGACTGT 57.068 32.000 0.00 0.00 0.00 3.55
392 393 9.878599 GTATTTTAATATGGATCGGTTTGACTG 57.121 33.333 0.00 0.00 0.00 3.51
393 394 8.770828 CGTATTTTAATATGGATCGGTTTGACT 58.229 33.333 0.00 0.00 0.00 3.41
394 395 8.013378 CCGTATTTTAATATGGATCGGTTTGAC 58.987 37.037 13.26 0.00 46.48 3.18
395 396 7.932491 TCCGTATTTTAATATGGATCGGTTTGA 59.068 33.333 16.05 0.00 46.83 2.69
396 397 8.090250 TCCGTATTTTAATATGGATCGGTTTG 57.910 34.615 16.05 0.00 46.83 2.93
423 424 3.807538 TCGGCCAGACGAGTACGC 61.808 66.667 2.24 0.00 43.96 4.42
424 425 2.099831 GTCGGCCAGACGAGTACG 59.900 66.667 2.24 0.00 44.42 3.67
432 433 2.119484 ATTCGTTTGGGTCGGCCAGA 62.119 55.000 9.07 0.00 36.17 3.86
433 434 0.391927 TATTCGTTTGGGTCGGCCAG 60.392 55.000 9.07 0.00 36.17 4.85
434 435 0.036448 TTATTCGTTTGGGTCGGCCA 59.964 50.000 9.07 0.00 36.17 5.36
435 436 1.166989 TTTATTCGTTTGGGTCGGCC 58.833 50.000 0.00 0.00 0.00 6.13
436 437 2.993449 TTTTATTCGTTTGGGTCGGC 57.007 45.000 0.00 0.00 0.00 5.54
453 454 0.179174 CGCGCGCTTTATCCCTTTTT 60.179 50.000 30.48 0.00 0.00 1.94
454 455 1.303091 ACGCGCGCTTTATCCCTTTT 61.303 50.000 32.58 1.37 0.00 2.27
455 456 1.702491 GACGCGCGCTTTATCCCTTT 61.702 55.000 32.58 5.00 0.00 3.11
456 457 2.125269 ACGCGCGCTTTATCCCTT 60.125 55.556 32.58 2.28 0.00 3.95
457 458 2.585247 GACGCGCGCTTTATCCCT 60.585 61.111 32.58 6.59 0.00 4.20
458 459 3.984765 CGACGCGCGCTTTATCCC 61.985 66.667 32.58 6.32 0.00 3.85
459 460 3.984765 CCGACGCGCGCTTTATCC 61.985 66.667 32.58 6.74 39.11 2.59
460 461 2.287637 AAACCGACGCGCGCTTTATC 62.288 55.000 32.58 18.71 39.11 1.75
461 462 2.385091 AAACCGACGCGCGCTTTAT 61.385 52.632 32.58 10.34 39.11 1.40
462 463 3.037249 AAACCGACGCGCGCTTTA 61.037 55.556 32.58 0.00 39.11 1.85
463 464 4.659874 CAAACCGACGCGCGCTTT 62.660 61.111 32.58 19.12 39.11 3.51
467 468 4.712873 GAACCAAACCGACGCGCG 62.713 66.667 30.96 30.96 40.47 6.86
468 469 4.712873 CGAACCAAACCGACGCGC 62.713 66.667 5.73 0.00 0.00 6.86
469 470 3.272420 GACGAACCAAACCGACGCG 62.272 63.158 3.53 3.53 0.00 6.01
470 471 1.883725 GAGACGAACCAAACCGACGC 61.884 60.000 0.00 0.00 0.00 5.19
471 472 0.318445 AGAGACGAACCAAACCGACG 60.318 55.000 0.00 0.00 0.00 5.12
472 473 2.712057 TAGAGACGAACCAAACCGAC 57.288 50.000 0.00 0.00 0.00 4.79
473 474 3.181477 TGTTTAGAGACGAACCAAACCGA 60.181 43.478 0.00 0.00 0.00 4.69
474 475 3.125316 TGTTTAGAGACGAACCAAACCG 58.875 45.455 0.00 0.00 0.00 4.44
475 476 5.237779 TCATTGTTTAGAGACGAACCAAACC 59.762 40.000 0.00 0.00 0.00 3.27
476 477 6.295039 TCATTGTTTAGAGACGAACCAAAC 57.705 37.500 0.00 0.00 0.00 2.93
477 478 6.928979 TTCATTGTTTAGAGACGAACCAAA 57.071 33.333 0.00 0.00 0.00 3.28
478 479 6.928979 TTTCATTGTTTAGAGACGAACCAA 57.071 33.333 0.00 0.00 0.00 3.67
479 480 6.128661 CGATTTCATTGTTTAGAGACGAACCA 60.129 38.462 0.00 0.00 0.00 3.67
480 481 6.241385 CGATTTCATTGTTTAGAGACGAACC 58.759 40.000 0.00 0.00 0.00 3.62
481 482 6.241385 CCGATTTCATTGTTTAGAGACGAAC 58.759 40.000 0.00 0.00 0.00 3.95
482 483 5.350365 CCCGATTTCATTGTTTAGAGACGAA 59.650 40.000 0.00 0.00 0.00 3.85
483 484 4.868171 CCCGATTTCATTGTTTAGAGACGA 59.132 41.667 0.00 0.00 0.00 4.20
484 485 4.034048 CCCCGATTTCATTGTTTAGAGACG 59.966 45.833 0.00 0.00 0.00 4.18
485 486 4.201920 GCCCCGATTTCATTGTTTAGAGAC 60.202 45.833 0.00 0.00 0.00 3.36
486 487 3.945285 GCCCCGATTTCATTGTTTAGAGA 59.055 43.478 0.00 0.00 0.00 3.10
487 488 3.066760 GGCCCCGATTTCATTGTTTAGAG 59.933 47.826 0.00 0.00 0.00 2.43
488 489 3.020984 GGCCCCGATTTCATTGTTTAGA 58.979 45.455 0.00 0.00 0.00 2.10
489 490 3.023832 AGGCCCCGATTTCATTGTTTAG 58.976 45.455 0.00 0.00 0.00 1.85
490 491 2.757868 CAGGCCCCGATTTCATTGTTTA 59.242 45.455 0.00 0.00 0.00 2.01
491 492 1.550072 CAGGCCCCGATTTCATTGTTT 59.450 47.619 0.00 0.00 0.00 2.83
492 493 1.185315 CAGGCCCCGATTTCATTGTT 58.815 50.000 0.00 0.00 0.00 2.83
493 494 0.684153 CCAGGCCCCGATTTCATTGT 60.684 55.000 0.00 0.00 0.00 2.71
494 495 0.684153 ACCAGGCCCCGATTTCATTG 60.684 55.000 0.00 0.00 0.00 2.82
495 496 0.041090 AACCAGGCCCCGATTTCATT 59.959 50.000 0.00 0.00 0.00 2.57
496 497 0.395724 GAACCAGGCCCCGATTTCAT 60.396 55.000 0.00 0.00 0.00 2.57
497 498 1.001393 GAACCAGGCCCCGATTTCA 60.001 57.895 0.00 0.00 0.00 2.69
498 499 0.748367 GAGAACCAGGCCCCGATTTC 60.748 60.000 0.00 0.00 0.00 2.17
499 500 1.303282 GAGAACCAGGCCCCGATTT 59.697 57.895 0.00 0.00 0.00 2.17
500 501 1.281925 ATGAGAACCAGGCCCCGATT 61.282 55.000 0.00 0.00 0.00 3.34
501 502 1.694169 ATGAGAACCAGGCCCCGAT 60.694 57.895 0.00 0.00 0.00 4.18
502 503 2.285368 ATGAGAACCAGGCCCCGA 60.285 61.111 0.00 0.00 0.00 5.14
503 504 2.190578 GATGAGAACCAGGCCCCG 59.809 66.667 0.00 0.00 0.00 5.73
504 505 1.529309 GAGATGAGAACCAGGCCCC 59.471 63.158 0.00 0.00 0.00 5.80
505 506 1.144936 CGAGATGAGAACCAGGCCC 59.855 63.158 0.00 0.00 0.00 5.80
506 507 1.522580 GCGAGATGAGAACCAGGCC 60.523 63.158 0.00 0.00 0.00 5.19
507 508 1.522580 GGCGAGATGAGAACCAGGC 60.523 63.158 0.00 0.00 0.00 4.85
508 509 0.179089 CTGGCGAGATGAGAACCAGG 60.179 60.000 0.00 0.00 43.42 4.45
509 510 3.359194 CTGGCGAGATGAGAACCAG 57.641 57.895 0.00 0.00 41.78 4.00
510 511 1.489481 ATCTGGCGAGATGAGAACCA 58.511 50.000 10.78 0.00 37.56 3.67
515 516 1.962807 AGAGGAATCTGGCGAGATGAG 59.037 52.381 12.37 0.00 39.04 2.90
517 518 1.873069 GCAGAGGAATCTGGCGAGATG 60.873 57.143 12.37 1.20 39.04 2.90
537 538 4.873129 CATCTCGACGGCCGTGGG 62.873 72.222 39.65 26.88 39.75 4.61
565 570 2.147387 AGTTTGACCGCACTCCCCT 61.147 57.895 0.00 0.00 0.00 4.79
567 572 2.617274 GCAGTTTGACCGCACTCCC 61.617 63.158 0.00 0.00 0.00 4.30
806 813 7.499200 AGTAGTCTTTGGAGTAGTAGAGAGA 57.501 40.000 0.00 0.00 31.36 3.10
833 840 2.450867 AGAGATGTAGAGGCAGAGCA 57.549 50.000 0.00 0.00 0.00 4.26
861 868 1.671901 CGAGGGACAGAGAAGGGAGC 61.672 65.000 0.00 0.00 0.00 4.70
1788 1831 3.135712 ACCAAAAATTCCACCCAGAAACC 59.864 43.478 0.00 0.00 0.00 3.27
2103 2703 4.597079 ACTACAAGCAAAACGACATTGTG 58.403 39.130 0.00 0.00 35.77 3.33
2449 3179 9.197306 ACTTAATTACTTTTTCAACAAGAGGGT 57.803 29.630 0.00 0.00 0.00 4.34
2525 3255 7.972277 CAGGAAATCAACAAGAGAAATATGGTG 59.028 37.037 0.00 0.00 33.06 4.17
2679 3634 6.463995 AACAAACCAAGTAAGCAAGATCAA 57.536 33.333 0.00 0.00 0.00 2.57
2743 3702 3.769739 TGGTGGCTCCATACATACATC 57.230 47.619 3.73 0.00 41.93 3.06
2778 3737 4.275936 GGCAACGGCAAGATATAAGTTCAT 59.724 41.667 0.00 0.00 43.71 2.57
2869 3828 8.172741 ACATTTGGGATGCCTATAATCAATAGT 58.827 33.333 4.35 0.00 36.57 2.12
2872 3831 7.860649 AACATTTGGGATGCCTATAATCAAT 57.139 32.000 4.35 0.00 0.00 2.57
2986 3945 6.287589 AGTACATTCTTCCTACAAGGACAG 57.712 41.667 0.00 0.00 45.78 3.51
2987 3946 7.786046 TTAGTACATTCTTCCTACAAGGACA 57.214 36.000 0.00 0.00 45.78 4.02
3041 4000 2.494870 ACAGCGTCGTATAAGGAAAGGT 59.505 45.455 0.00 0.00 0.00 3.50
3127 4086 5.661056 ATCATCGAAGTTCCAGTTGACTA 57.339 39.130 0.00 0.00 0.00 2.59
3458 4419 0.750850 ATAGCATGGTAAGACCGCGT 59.249 50.000 8.98 0.00 42.58 6.01
3618 4588 1.606668 CCAAGAACTTGCTTTGCCGTA 59.393 47.619 8.81 0.00 39.16 4.02
3670 4640 5.373222 TGAAACTAACATAACACAGTGCCT 58.627 37.500 0.00 0.00 0.00 4.75
3709 4845 5.516090 ACTTACGCAAATTTGATGTTTCGT 58.484 33.333 22.31 20.07 0.00 3.85
3747 4883 3.555966 ACAGGCTGAAGTTTAAAGCAGT 58.444 40.909 23.66 0.00 38.73 4.40
3784 4920 4.199432 ACACACTGCCATTGAAAAACAA 57.801 36.364 0.00 0.00 42.95 2.83
3800 4937 8.572185 TGATCTTCTAGCTATCAGATTACACAC 58.428 37.037 13.50 4.07 0.00 3.82
3905 5042 6.922957 ACCGCATAGCCAAAATAAATTACATG 59.077 34.615 0.00 0.00 0.00 3.21
3911 5048 7.867403 CAGATTTACCGCATAGCCAAAATAAAT 59.133 33.333 0.00 0.00 0.00 1.40
3943 5216 9.736414 AATTGATCTGAGTATTAGATCCAATGG 57.264 33.333 11.27 0.00 46.35 3.16
3980 5253 6.589135 ACTTTTACTACAAGTGTTAGGCAGT 58.411 36.000 0.00 0.00 33.04 4.40
4092 5941 6.774170 TGGATTCAGCATTGCTCAGTATATTT 59.226 34.615 8.54 0.00 36.40 1.40
4153 6002 4.511454 TCAATCCTCATTTTATTCTCGGCG 59.489 41.667 0.00 0.00 0.00 6.46
4204 6053 3.096852 ACATCAACGGTGTATCTCCAGA 58.903 45.455 0.00 0.00 0.00 3.86
4207 6056 3.448686 CAGACATCAACGGTGTATCTCC 58.551 50.000 0.00 0.00 0.00 3.71
4252 6101 2.031420 CGCTCCATGTAATTGCCATCTG 60.031 50.000 0.00 0.00 0.00 2.90
4308 6172 7.281841 TCAATATTATGCTGTCCATGTCTTGA 58.718 34.615 0.00 0.00 35.34 3.02
4384 6248 7.547019 AGCAGCAAAATTAAGAAATTAGGCTTC 59.453 33.333 0.00 3.74 40.12 3.86
4390 6254 9.709495 ACATGAAGCAGCAAAATTAAGAAATTA 57.291 25.926 0.00 0.00 34.12 1.40
4399 6263 6.514947 TGTTAGAACATGAAGCAGCAAAATT 58.485 32.000 0.00 0.00 33.17 1.82
4437 6301 3.581755 TCCACGATTGTAAGAAGGAACG 58.418 45.455 0.00 0.00 0.00 3.95
4455 6319 3.798794 CCGGTTCAATAGGCATCCA 57.201 52.632 0.00 0.00 0.00 3.41
4473 6338 5.228665 GGTAGTATGGGAAACTTCGATAGC 58.771 45.833 0.00 0.00 0.00 2.97
4479 6344 3.264964 TGGTGGGTAGTATGGGAAACTTC 59.735 47.826 0.00 0.00 0.00 3.01
4484 6349 2.653543 ACTGGTGGGTAGTATGGGAA 57.346 50.000 0.00 0.00 0.00 3.97
4486 6351 3.326880 GGATAACTGGTGGGTAGTATGGG 59.673 52.174 0.00 0.00 0.00 4.00
4495 6360 2.577606 TTGTGTGGATAACTGGTGGG 57.422 50.000 0.00 0.00 0.00 4.61
4514 6379 7.045416 TGCACAGTAACATAAGGTCGATTAAT 58.955 34.615 0.00 0.00 0.00 1.40
4524 6389 6.500684 AAACAGGATGCACAGTAACATAAG 57.499 37.500 0.00 0.00 42.53 1.73
4631 6560 5.143369 AGAGGAACATTTGGAGCTTTCTTT 58.857 37.500 0.00 0.00 0.00 2.52
4664 6593 4.545823 TTGTTTCAGCCTTGACTTTACG 57.454 40.909 0.00 0.00 31.71 3.18
4706 6635 7.074653 TCAAACCCTTAGAGCTCTTCTTTTA 57.925 36.000 23.84 0.00 37.36 1.52
4746 6675 9.082313 AGTATCAGAGGACACAAAATTCAATTT 57.918 29.630 0.00 0.00 0.00 1.82
4752 6681 9.911788 ATATTCAGTATCAGAGGACACAAAATT 57.088 29.630 0.00 0.00 0.00 1.82
4947 6881 4.440880 CAAGGTGAGAACCAAATTTTGCA 58.559 39.130 3.50 0.00 0.00 4.08
5023 6957 5.248870 ACTGAACAGTTTAACAAGCAAGG 57.751 39.130 1.32 0.00 38.83 3.61
5056 6990 4.199002 TGGACTGATCAAGGATAGGCTA 57.801 45.455 0.00 0.00 0.00 3.93
5112 7050 7.555914 TCGAGCAATAGAAGAGCTATCTATCAT 59.444 37.037 17.46 9.60 38.78 2.45
5123 7061 4.686972 TGGTTGATCGAGCAATAGAAGAG 58.313 43.478 20.26 0.00 0.00 2.85
5124 7062 4.402474 TCTGGTTGATCGAGCAATAGAAGA 59.598 41.667 20.26 15.77 0.00 2.87
5125 7063 4.686972 TCTGGTTGATCGAGCAATAGAAG 58.313 43.478 20.26 13.88 0.00 2.85
5206 7144 4.513406 ACTAGTTCAAAAAGGGACCACA 57.487 40.909 0.00 0.00 0.00 4.17
5223 7161 6.110411 TCAAGGTCCCAAGAACTAAACTAG 57.890 41.667 0.00 0.00 39.96 2.57
5277 7470 9.846248 CCTTATTGGAAATGAAAGTAGAAGTTG 57.154 33.333 0.00 0.00 38.35 3.16
5504 7699 7.500992 ACTTAATTCTCAAGTTGACTCTCACA 58.499 34.615 0.08 0.00 32.28 3.58
5569 7776 8.816144 GCAAATCTTCAACATTTTGTTCTTGTA 58.184 29.630 0.00 0.00 38.77 2.41
5570 7777 7.333921 TGCAAATCTTCAACATTTTGTTCTTGT 59.666 29.630 0.00 0.00 38.77 3.16
5572 7779 7.846644 TGCAAATCTTCAACATTTTGTTCTT 57.153 28.000 0.00 0.00 38.77 2.52
5609 7816 3.149005 TCCACCTAACATCCAACCAAC 57.851 47.619 0.00 0.00 0.00 3.77
5813 8871 4.263462 TGCAATATGTCCTTCACCACTTCT 60.263 41.667 0.00 0.00 0.00 2.85
5895 8953 3.133003 CGTGAGGGATACATTCTGAAGGT 59.867 47.826 12.62 12.62 39.74 3.50
6009 9067 2.286418 CGAATAATGCCGTGAAGCCTTC 60.286 50.000 0.00 0.00 0.00 3.46
6119 9177 1.480954 ACGTGACCGGAATAAGAGCAT 59.519 47.619 9.46 0.00 38.78 3.79
6127 9185 0.171903 CGGACTTACGTGACCGGAAT 59.828 55.000 9.46 0.00 40.47 3.01
6129 9187 3.266964 CGGACTTACGTGACCGGA 58.733 61.111 9.46 0.00 40.47 5.14
6273 9332 2.942796 ATTCGGTGCGTGCTCCTCA 61.943 57.895 10.83 0.00 0.00 3.86
6303 9366 2.566279 GAGATATCATCAGGCAGGAGCA 59.434 50.000 5.32 0.00 44.61 4.26
6408 9472 5.350640 GCTCTTAACCACCAATACAGTACAC 59.649 44.000 0.00 0.00 0.00 2.90
6443 9511 2.826725 ACTAACAGTCAGTGGCCTACTC 59.173 50.000 3.32 0.00 37.60 2.59
6493 9561 1.071385 CTCTTCCCTTGGCGATATGCT 59.929 52.381 0.00 0.00 45.43 3.79
6500 9568 0.674895 CTTGTCCTCTTCCCTTGGCG 60.675 60.000 0.00 0.00 0.00 5.69
6504 9572 1.662686 CCCTCTTGTCCTCTTCCCTT 58.337 55.000 0.00 0.00 0.00 3.95
6505 9573 0.912006 GCCCTCTTGTCCTCTTCCCT 60.912 60.000 0.00 0.00 0.00 4.20
6511 9579 3.672295 CTGGCGCCCTCTTGTCCTC 62.672 68.421 26.77 0.00 0.00 3.71
6512 9580 3.710722 CTGGCGCCCTCTTGTCCT 61.711 66.667 26.77 0.00 0.00 3.85
6542 9613 7.551262 CACACATAGGGTAGCACTATACAAAAA 59.449 37.037 0.00 0.00 30.34 1.94
6557 9628 1.563924 TAGAACGGCACACATAGGGT 58.436 50.000 0.00 0.00 0.00 4.34
6606 9678 1.596752 CAACACAGCAGCGTACCCA 60.597 57.895 0.00 0.00 0.00 4.51
6632 9704 3.120782 CACGTAGCCGAAACTTTCAGTAC 59.879 47.826 2.49 0.00 37.88 2.73
6652 9724 1.450312 CCTGATCCCGTCTTGGCAC 60.450 63.158 0.00 0.00 35.87 5.01
6659 9731 2.912020 AGGTTACCCTGATCCCGTC 58.088 57.895 0.00 0.00 40.58 4.79
6688 9760 7.750903 GGCAAACTCTCAAAATTATACTGTGAC 59.249 37.037 0.00 0.00 0.00 3.67
6704 9776 2.289945 ACATGAGACCAGGCAAACTCTC 60.290 50.000 0.00 0.00 0.00 3.20
6727 9799 2.738013 AAGTGGACCGCTACAAGTAC 57.262 50.000 8.28 0.00 0.00 2.73
6729 9801 3.007614 ACAATAAGTGGACCGCTACAAGT 59.992 43.478 8.28 2.78 0.00 3.16
6730 9802 3.596214 ACAATAAGTGGACCGCTACAAG 58.404 45.455 8.28 2.14 0.00 3.16
6734 9806 2.231964 ACGAACAATAAGTGGACCGCTA 59.768 45.455 8.28 0.00 0.00 4.26
6735 9807 1.001633 ACGAACAATAAGTGGACCGCT 59.998 47.619 0.29 0.29 0.00 5.52
6742 9814 6.731164 AGTTTAAACCCACGAACAATAAGTG 58.269 36.000 14.72 0.00 35.79 3.16
6743 9815 6.947644 AGTTTAAACCCACGAACAATAAGT 57.052 33.333 14.72 0.00 0.00 2.24
6744 9816 9.733219 TTAAAGTTTAAACCCACGAACAATAAG 57.267 29.630 14.72 0.00 0.00 1.73
6746 9818 9.513727 GTTTAAAGTTTAAACCCACGAACAATA 57.486 29.630 29.16 2.26 32.80 1.90
6775 9847 0.901580 CAATGGCCCCAAGAGCAGTT 60.902 55.000 0.00 0.00 0.00 3.16
6888 9967 5.391416 CCTCTTTTGATTTTCTTCTCCGCTC 60.391 44.000 0.00 0.00 0.00 5.03
6912 9991 1.135944 GCTGTCTAAACAAGCCGCTTC 60.136 52.381 1.56 0.00 34.24 3.86
6919 9998 6.036517 AGCTGATAATTCGCTGTCTAAACAAG 59.963 38.462 0.00 0.00 34.24 3.16
6937 10016 7.345691 TGGACTTTGGAATGATAAAGCTGATA 58.654 34.615 0.00 0.00 37.40 2.15
6938 10017 6.189859 TGGACTTTGGAATGATAAAGCTGAT 58.810 36.000 0.00 0.00 37.40 2.90
6974 10053 5.705905 GCCCGCCTTTAATATGTTCTCTAAT 59.294 40.000 0.00 0.00 0.00 1.73
7010 10093 4.033709 ACAGACCTGCACCTATTACATCT 58.966 43.478 0.00 0.00 0.00 2.90
7024 10107 2.154854 TTTTGAGCTCGACAGACCTG 57.845 50.000 9.64 0.00 0.00 4.00
7025 10108 2.158957 TGTTTTTGAGCTCGACAGACCT 60.159 45.455 9.64 0.00 0.00 3.85
7026 10109 2.210116 TGTTTTTGAGCTCGACAGACC 58.790 47.619 9.64 0.00 0.00 3.85
7028 10111 2.866156 CACTGTTTTTGAGCTCGACAGA 59.134 45.455 29.79 11.01 39.97 3.41
7029 10112 2.609459 ACACTGTTTTTGAGCTCGACAG 59.391 45.455 25.16 25.16 42.48 3.51
7030 10113 2.627945 ACACTGTTTTTGAGCTCGACA 58.372 42.857 9.64 10.08 0.00 4.35
7031 10114 3.546218 GGAACACTGTTTTTGAGCTCGAC 60.546 47.826 9.64 5.87 0.00 4.20
7032 10115 2.612212 GGAACACTGTTTTTGAGCTCGA 59.388 45.455 9.64 3.88 0.00 4.04
7048 10132 6.800072 AAACTGATTAAAGTTTGGGGAACA 57.200 33.333 4.79 0.00 46.16 3.18
7071 10155 9.264719 CAGATTATGTATGCTCAAATCACTACA 57.735 33.333 0.00 0.00 0.00 2.74
7072 10156 8.226448 GCAGATTATGTATGCTCAAATCACTAC 58.774 37.037 0.00 0.00 41.77 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.