Multiple sequence alignment - TraesCS1D01G290300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G290300 chr1D 100.000 3066 0 0 1 3066 388607531 388604466 0.000000e+00 5662.0
1 TraesCS1D01G290300 chr1D 95.775 355 12 2 145 498 359693184 359693536 1.230000e-158 569.0
2 TraesCS1D01G290300 chr1D 95.455 352 13 2 145 495 218258709 218259058 2.670000e-155 558.0
3 TraesCS1D01G290300 chr1D 86.441 118 14 1 2030 2147 355753309 355753194 8.920000e-26 128.0
4 TraesCS1D01G290300 chr1D 96.296 54 2 0 1865 1918 445365522 445365469 4.210000e-14 89.8
5 TraesCS1D01G290300 chr1B 94.211 881 44 4 2188 3065 521863033 521862157 0.000000e+00 1338.0
6 TraesCS1D01G290300 chr1B 92.321 560 39 4 1623 2180 521863650 521863093 0.000000e+00 793.0
7 TraesCS1D01G290300 chr1B 93.067 375 22 3 137 509 571700854 571701226 2.080000e-151 545.0
8 TraesCS1D01G290300 chr1B 81.752 685 88 25 603 1264 521864914 521864244 3.480000e-149 538.0
9 TraesCS1D01G290300 chr1A 93.410 607 36 3 2191 2796 487607293 487606690 0.000000e+00 896.0
10 TraesCS1D01G290300 chr1A 92.806 556 36 4 1623 2176 487607912 487607359 0.000000e+00 802.0
11 TraesCS1D01G290300 chr1A 87.593 540 24 19 576 1079 487609062 487608530 1.220000e-163 586.0
12 TraesCS1D01G290300 chr1A 93.860 228 10 2 2840 3066 487606688 487606464 1.050000e-89 340.0
13 TraesCS1D01G290300 chr1A 86.441 118 16 0 2030 2147 456372806 456372689 2.480000e-26 130.0
14 TraesCS1D01G290300 chr1A 86.000 100 14 0 2036 2135 485011812 485011911 1.160000e-19 108.0
15 TraesCS1D01G290300 chr1A 100.000 34 0 0 1865 1898 541459030 541458997 2.550000e-06 63.9
16 TraesCS1D01G290300 chr2D 95.751 353 12 2 145 496 534851800 534852150 1.600000e-157 566.0
17 TraesCS1D01G290300 chr2D 94.708 359 16 3 138 495 40146025 40146381 3.450000e-154 555.0
18 TraesCS1D01G290300 chr2D 89.266 177 13 2 1602 1774 537411631 537411805 1.850000e-52 217.0
19 TraesCS1D01G290300 chr3D 95.739 352 12 2 145 495 283239429 283239080 5.740000e-157 564.0
20 TraesCS1D01G290300 chr3D 90.741 54 5 0 1865 1918 114878961 114878908 4.240000e-09 73.1
21 TraesCS1D01G290300 chr3A 95.455 352 13 2 145 495 638058029 638057680 2.670000e-155 558.0
22 TraesCS1D01G290300 chr5A 94.930 355 14 3 149 501 402103182 402102830 1.240000e-153 553.0
23 TraesCS1D01G290300 chr5A 98.246 57 1 0 2056 2112 380562289 380562233 1.950000e-17 100.0
24 TraesCS1D01G290300 chr7D 94.231 364 16 4 138 500 99817693 99818052 4.470000e-153 551.0
25 TraesCS1D01G290300 chr7D 88.276 145 16 1 1637 1780 508070099 508069955 4.060000e-39 172.0
26 TraesCS1D01G290300 chr7B 87.845 181 20 2 1602 1780 270954006 270954186 8.610000e-51 211.0
27 TraesCS1D01G290300 chr5B 98.246 57 1 0 2056 2112 688629750 688629694 1.950000e-17 100.0
28 TraesCS1D01G290300 chr6A 96.491 57 2 0 2056 2112 53686890 53686834 9.050000e-16 95.3
29 TraesCS1D01G290300 chr6A 96.491 57 2 0 2056 2112 62871932 62871988 9.050000e-16 95.3
30 TraesCS1D01G290300 chr4B 96.296 54 1 1 1012 1065 589771928 589771980 1.510000e-13 87.9
31 TraesCS1D01G290300 chr2B 96.296 54 1 1 1012 1065 287823563 287823511 1.510000e-13 87.9
32 TraesCS1D01G290300 chr7A 94.444 54 2 1 1012 1065 150154168 150154116 7.050000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G290300 chr1D 388604466 388607531 3065 True 5662.000000 5662 100.00000 1 3066 1 chr1D.!!$R2 3065
1 TraesCS1D01G290300 chr1B 521862157 521864914 2757 True 889.666667 1338 89.42800 603 3065 3 chr1B.!!$R1 2462
2 TraesCS1D01G290300 chr1A 487606464 487609062 2598 True 656.000000 896 91.91725 576 3066 4 chr1A.!!$R3 2490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
557 558 0.034896 AGTTATTAGGGCGGATGCGG 59.965 55.0 9.2 0.0 44.10 5.69 F
1582 1924 0.108281 GAAGGCGTAGAGGGAACACC 60.108 60.0 0.0 0.0 40.67 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 2326 0.098905 GCTCGCGAGTGTGTCATCTA 59.901 55.0 34.46 0.0 0.00 1.98 R
2988 3423 0.729116 CGGTGATTCCATGTGCAGAC 59.271 55.0 0.00 0.0 35.57 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.125106 GTGCATCTCGACCCACCC 60.125 66.667 0.00 0.00 0.00 4.61
18 19 2.606213 TGCATCTCGACCCACCCA 60.606 61.111 0.00 0.00 0.00 4.51
19 20 1.995066 TGCATCTCGACCCACCCAT 60.995 57.895 0.00 0.00 0.00 4.00
20 21 1.524621 GCATCTCGACCCACCCATG 60.525 63.158 0.00 0.00 0.00 3.66
21 22 1.907739 CATCTCGACCCACCCATGT 59.092 57.895 0.00 0.00 0.00 3.21
22 23 0.462581 CATCTCGACCCACCCATGTG 60.463 60.000 0.00 0.00 42.39 3.21
23 24 2.257409 ATCTCGACCCACCCATGTGC 62.257 60.000 0.00 0.00 41.35 4.57
24 25 3.976701 CTCGACCCACCCATGTGCC 62.977 68.421 0.00 0.00 41.35 5.01
26 27 3.661648 GACCCACCCATGTGCCCT 61.662 66.667 0.00 0.00 41.35 5.19
27 28 3.645268 GACCCACCCATGTGCCCTC 62.645 68.421 0.00 0.00 41.35 4.30
28 29 4.802051 CCCACCCATGTGCCCTCG 62.802 72.222 0.00 0.00 41.35 4.63
29 30 3.716195 CCACCCATGTGCCCTCGA 61.716 66.667 0.00 0.00 41.35 4.04
30 31 2.591753 CACCCATGTGCCCTCGAT 59.408 61.111 0.00 0.00 35.31 3.59
31 32 1.695114 CCACCCATGTGCCCTCGATA 61.695 60.000 0.00 0.00 41.35 2.92
32 33 0.397941 CACCCATGTGCCCTCGATAT 59.602 55.000 0.00 0.00 35.31 1.63
33 34 0.397941 ACCCATGTGCCCTCGATATG 59.602 55.000 0.00 0.00 0.00 1.78
34 35 0.321919 CCCATGTGCCCTCGATATGG 60.322 60.000 0.00 0.00 38.37 2.74
35 36 0.686789 CCATGTGCCCTCGATATGGA 59.313 55.000 0.00 0.00 40.52 3.41
36 37 1.280133 CCATGTGCCCTCGATATGGAT 59.720 52.381 0.00 0.00 40.52 3.41
37 38 2.625737 CATGTGCCCTCGATATGGATC 58.374 52.381 0.32 0.00 0.00 3.36
38 39 2.015456 TGTGCCCTCGATATGGATCT 57.985 50.000 0.00 0.00 0.00 2.75
39 40 1.895798 TGTGCCCTCGATATGGATCTC 59.104 52.381 0.00 0.00 0.00 2.75
40 41 1.205893 GTGCCCTCGATATGGATCTCC 59.794 57.143 0.00 0.00 0.00 3.71
41 42 1.077828 TGCCCTCGATATGGATCTCCT 59.922 52.381 0.00 0.00 36.82 3.69
42 43 1.754226 GCCCTCGATATGGATCTCCTC 59.246 57.143 0.00 0.00 36.82 3.71
43 44 2.885972 GCCCTCGATATGGATCTCCTCA 60.886 54.545 0.00 0.00 36.82 3.86
44 45 3.435275 CCCTCGATATGGATCTCCTCAA 58.565 50.000 0.00 0.00 36.82 3.02
45 46 3.194542 CCCTCGATATGGATCTCCTCAAC 59.805 52.174 0.00 0.00 36.82 3.18
46 47 3.194542 CCTCGATATGGATCTCCTCAACC 59.805 52.174 0.00 0.00 36.82 3.77
47 48 4.085733 CTCGATATGGATCTCCTCAACCT 58.914 47.826 0.00 0.00 36.82 3.50
48 49 3.829026 TCGATATGGATCTCCTCAACCTG 59.171 47.826 0.00 0.00 36.82 4.00
49 50 3.056250 CGATATGGATCTCCTCAACCTGG 60.056 52.174 0.00 0.00 36.82 4.45
50 51 2.575921 ATGGATCTCCTCAACCTGGA 57.424 50.000 0.00 0.00 36.82 3.86
51 52 2.575921 TGGATCTCCTCAACCTGGAT 57.424 50.000 0.00 0.00 36.82 3.41
52 53 2.402564 TGGATCTCCTCAACCTGGATC 58.597 52.381 0.00 0.00 36.82 3.36
53 54 1.342819 GGATCTCCTCAACCTGGATCG 59.657 57.143 0.00 0.00 35.14 3.69
54 55 0.755686 ATCTCCTCAACCTGGATCGC 59.244 55.000 0.00 0.00 32.56 4.58
55 56 0.324738 TCTCCTCAACCTGGATCGCT 60.325 55.000 0.00 0.00 32.56 4.93
56 57 1.063942 TCTCCTCAACCTGGATCGCTA 60.064 52.381 0.00 0.00 32.56 4.26
57 58 1.339610 CTCCTCAACCTGGATCGCTAG 59.660 57.143 0.00 0.00 32.56 3.42
58 59 1.063942 TCCTCAACCTGGATCGCTAGA 60.064 52.381 0.00 0.00 0.00 2.43
59 60 1.757118 CCTCAACCTGGATCGCTAGAA 59.243 52.381 0.00 0.00 0.00 2.10
60 61 2.168521 CCTCAACCTGGATCGCTAGAAA 59.831 50.000 0.00 0.00 0.00 2.52
61 62 3.190874 CTCAACCTGGATCGCTAGAAAC 58.809 50.000 0.00 0.00 0.00 2.78
62 63 1.927174 CAACCTGGATCGCTAGAAACG 59.073 52.381 0.00 0.00 0.00 3.60
63 64 0.460311 ACCTGGATCGCTAGAAACGG 59.540 55.000 0.00 0.00 0.00 4.44
64 65 0.460311 CCTGGATCGCTAGAAACGGT 59.540 55.000 0.00 0.00 0.00 4.83
65 66 1.536284 CCTGGATCGCTAGAAACGGTC 60.536 57.143 0.00 0.00 39.93 4.79
66 67 0.099968 TGGATCGCTAGAAACGGTCG 59.900 55.000 0.00 0.00 41.56 4.79
67 68 0.379669 GGATCGCTAGAAACGGTCGA 59.620 55.000 0.00 0.00 41.56 4.20
68 69 1.001597 GGATCGCTAGAAACGGTCGAT 60.002 52.381 0.00 0.00 41.56 3.59
69 70 2.543238 GGATCGCTAGAAACGGTCGATT 60.543 50.000 0.00 0.00 41.56 3.34
70 71 2.184385 TCGCTAGAAACGGTCGATTC 57.816 50.000 5.44 5.44 0.00 2.52
71 72 0.838229 CGCTAGAAACGGTCGATTCG 59.162 55.000 0.00 0.00 33.08 3.34
72 73 1.197910 GCTAGAAACGGTCGATTCGG 58.802 55.000 6.18 6.44 33.08 4.30
73 74 1.197910 CTAGAAACGGTCGATTCGGC 58.802 55.000 6.18 3.75 33.08 5.54
79 80 3.087176 GGTCGATTCGGCCGTTTC 58.913 61.111 27.15 20.92 43.18 2.78
80 81 1.447314 GGTCGATTCGGCCGTTTCT 60.447 57.895 27.15 8.19 43.18 2.52
81 82 0.179129 GGTCGATTCGGCCGTTTCTA 60.179 55.000 27.15 12.29 43.18 2.10
82 83 1.537562 GGTCGATTCGGCCGTTTCTAT 60.538 52.381 27.15 11.75 43.18 1.98
83 84 1.785430 GTCGATTCGGCCGTTTCTATC 59.215 52.381 27.15 18.20 0.00 2.08
84 85 1.406180 TCGATTCGGCCGTTTCTATCA 59.594 47.619 27.15 0.00 0.00 2.15
85 86 1.787155 CGATTCGGCCGTTTCTATCAG 59.213 52.381 27.15 12.57 0.00 2.90
86 87 2.135933 GATTCGGCCGTTTCTATCAGG 58.864 52.381 27.15 0.00 0.00 3.86
89 90 4.954933 GCCGTTTCTATCAGGCCA 57.045 55.556 5.01 0.00 43.54 5.36
90 91 2.695314 GCCGTTTCTATCAGGCCAG 58.305 57.895 5.01 0.00 43.54 4.85
91 92 0.815615 GCCGTTTCTATCAGGCCAGG 60.816 60.000 5.01 0.00 43.54 4.45
92 93 0.815615 CCGTTTCTATCAGGCCAGGC 60.816 60.000 5.01 1.26 0.00 4.85
93 94 0.179000 CGTTTCTATCAGGCCAGGCT 59.821 55.000 12.43 0.00 0.00 4.58
94 95 1.412710 CGTTTCTATCAGGCCAGGCTA 59.587 52.381 12.43 0.00 0.00 3.93
95 96 2.158957 CGTTTCTATCAGGCCAGGCTAA 60.159 50.000 12.43 0.00 0.00 3.09
96 97 3.471680 GTTTCTATCAGGCCAGGCTAAG 58.528 50.000 12.43 1.40 0.00 2.18
97 98 1.722034 TCTATCAGGCCAGGCTAAGG 58.278 55.000 12.43 0.00 0.00 2.69
98 99 1.220493 TCTATCAGGCCAGGCTAAGGA 59.780 52.381 12.43 4.37 0.00 3.36
99 100 1.622811 CTATCAGGCCAGGCTAAGGAG 59.377 57.143 12.43 0.00 0.00 3.69
100 101 0.327000 ATCAGGCCAGGCTAAGGAGT 60.327 55.000 12.43 0.00 0.00 3.85
101 102 0.338467 TCAGGCCAGGCTAAGGAGTA 59.662 55.000 12.43 0.00 0.00 2.59
102 103 0.466124 CAGGCCAGGCTAAGGAGTAC 59.534 60.000 12.43 0.00 0.00 2.73
103 104 0.340208 AGGCCAGGCTAAGGAGTACT 59.660 55.000 12.43 0.00 0.00 2.73
104 105 1.205055 GGCCAGGCTAAGGAGTACTT 58.795 55.000 12.43 0.00 43.28 2.24
105 106 1.560146 GGCCAGGCTAAGGAGTACTTT 59.440 52.381 12.43 0.00 40.64 2.66
106 107 2.770232 GGCCAGGCTAAGGAGTACTTTA 59.230 50.000 12.43 0.00 40.64 1.85
107 108 3.199289 GGCCAGGCTAAGGAGTACTTTAA 59.801 47.826 12.43 0.00 40.64 1.52
108 109 4.443621 GCCAGGCTAAGGAGTACTTTAAG 58.556 47.826 3.29 0.00 40.64 1.85
109 110 4.081031 GCCAGGCTAAGGAGTACTTTAAGT 60.081 45.833 3.29 2.32 40.64 2.24
110 111 5.571047 GCCAGGCTAAGGAGTACTTTAAGTT 60.571 44.000 3.29 0.00 40.64 2.66
111 112 6.107343 CCAGGCTAAGGAGTACTTTAAGTTC 58.893 44.000 1.94 0.00 40.64 3.01
112 113 6.107343 CAGGCTAAGGAGTACTTTAAGTTCC 58.893 44.000 1.94 5.31 40.64 3.62
113 114 5.105432 AGGCTAAGGAGTACTTTAAGTTCCG 60.105 44.000 1.94 0.00 40.64 4.30
114 115 5.337089 GGCTAAGGAGTACTTTAAGTTCCGT 60.337 44.000 1.94 6.24 40.64 4.69
115 116 6.127619 GGCTAAGGAGTACTTTAAGTTCCGTA 60.128 42.308 1.94 7.06 40.64 4.02
116 117 6.749578 GCTAAGGAGTACTTTAAGTTCCGTAC 59.250 42.308 1.94 0.00 40.64 3.67
117 118 6.907853 AAGGAGTACTTTAAGTTCCGTACT 57.092 37.500 1.94 0.00 43.62 2.73
118 119 9.167311 CTAAGGAGTACTTTAAGTTCCGTACTA 57.833 37.037 1.94 0.00 41.70 1.82
119 120 8.586879 AAGGAGTACTTTAAGTTCCGTACTAT 57.413 34.615 1.94 0.00 41.70 2.12
120 121 7.994194 AGGAGTACTTTAAGTTCCGTACTATG 58.006 38.462 1.94 0.00 41.70 2.23
121 122 6.694844 GGAGTACTTTAAGTTCCGTACTATGC 59.305 42.308 1.94 0.00 41.70 3.14
122 123 7.161773 AGTACTTTAAGTTCCGTACTATGCA 57.838 36.000 1.94 0.00 40.35 3.96
123 124 7.605449 AGTACTTTAAGTTCCGTACTATGCAA 58.395 34.615 1.94 0.00 40.35 4.08
124 125 6.963049 ACTTTAAGTTCCGTACTATGCAAG 57.037 37.500 0.00 0.00 35.54 4.01
125 126 6.694447 ACTTTAAGTTCCGTACTATGCAAGA 58.306 36.000 0.00 0.00 35.54 3.02
126 127 7.156673 ACTTTAAGTTCCGTACTATGCAAGAA 58.843 34.615 0.00 0.00 35.54 2.52
127 128 7.822822 ACTTTAAGTTCCGTACTATGCAAGAAT 59.177 33.333 0.00 0.00 35.54 2.40
128 129 8.556213 TTTAAGTTCCGTACTATGCAAGAATT 57.444 30.769 0.00 0.00 35.54 2.17
129 130 8.556213 TTAAGTTCCGTACTATGCAAGAATTT 57.444 30.769 0.00 0.00 35.54 1.82
130 131 6.422776 AGTTCCGTACTATGCAAGAATTTG 57.577 37.500 0.00 0.00 34.56 2.32
131 132 6.170506 AGTTCCGTACTATGCAAGAATTTGA 58.829 36.000 0.00 0.00 33.95 2.69
132 133 6.823689 AGTTCCGTACTATGCAAGAATTTGAT 59.176 34.615 0.00 0.00 33.95 2.57
133 134 6.603237 TCCGTACTATGCAAGAATTTGATG 57.397 37.500 0.00 0.00 36.36 3.07
134 135 5.007626 TCCGTACTATGCAAGAATTTGATGC 59.992 40.000 0.00 4.62 40.45 3.91
138 139 2.373540 TGCAAGAATTTGATGCAGCC 57.626 45.000 0.00 0.00 44.52 4.85
139 140 1.066716 TGCAAGAATTTGATGCAGCCC 60.067 47.619 0.00 0.00 44.52 5.19
140 141 1.066716 GCAAGAATTTGATGCAGCCCA 60.067 47.619 0.00 0.00 39.81 5.36
141 142 2.888594 CAAGAATTTGATGCAGCCCAG 58.111 47.619 0.00 0.00 36.36 4.45
142 143 2.226962 AGAATTTGATGCAGCCCAGT 57.773 45.000 0.00 0.00 0.00 4.00
143 144 2.097825 AGAATTTGATGCAGCCCAGTC 58.902 47.619 0.00 0.00 0.00 3.51
144 145 1.820519 GAATTTGATGCAGCCCAGTCA 59.179 47.619 0.00 0.00 0.00 3.41
145 146 2.154567 ATTTGATGCAGCCCAGTCAT 57.845 45.000 0.00 0.00 0.00 3.06
146 147 2.804986 TTTGATGCAGCCCAGTCATA 57.195 45.000 0.00 0.00 0.00 2.15
147 148 2.042686 TTGATGCAGCCCAGTCATAC 57.957 50.000 0.00 0.00 0.00 2.39
148 149 0.181114 TGATGCAGCCCAGTCATACC 59.819 55.000 0.00 0.00 0.00 2.73
149 150 0.471617 GATGCAGCCCAGTCATACCT 59.528 55.000 0.00 0.00 0.00 3.08
150 151 0.182061 ATGCAGCCCAGTCATACCTG 59.818 55.000 0.00 0.00 0.00 4.00
156 157 3.409201 CCAGTCATACCTGGCCATG 57.591 57.895 5.51 6.06 45.19 3.66
157 158 0.179009 CCAGTCATACCTGGCCATGG 60.179 60.000 5.51 13.05 45.19 3.66
158 159 0.179009 CAGTCATACCTGGCCATGGG 60.179 60.000 20.97 16.10 0.00 4.00
213 214 1.180029 CCCATGGCAGAAAACTGAGG 58.820 55.000 6.09 0.00 0.00 3.86
214 215 0.529378 CCATGGCAGAAAACTGAGGC 59.471 55.000 0.00 0.00 0.00 4.70
215 216 0.529378 CATGGCAGAAAACTGAGGCC 59.471 55.000 0.00 0.00 44.82 5.19
216 217 0.613012 ATGGCAGAAAACTGAGGCCC 60.613 55.000 0.00 0.00 43.96 5.80
217 218 1.228552 GGCAGAAAACTGAGGCCCA 60.229 57.895 0.00 0.00 38.70 5.36
237 238 4.431524 CCCTCCCAGGCCCTACCA 62.432 72.222 0.00 0.00 43.14 3.25
238 239 2.039405 CCTCCCAGGCCCTACCAT 60.039 66.667 0.00 0.00 43.14 3.55
239 240 2.150051 CCTCCCAGGCCCTACCATC 61.150 68.421 0.00 0.00 43.14 3.51
240 241 2.445845 TCCCAGGCCCTACCATCG 60.446 66.667 0.00 0.00 43.14 3.84
241 242 3.560251 CCCAGGCCCTACCATCGG 61.560 72.222 0.00 0.00 43.14 4.18
242 243 3.560251 CCAGGCCCTACCATCGGG 61.560 72.222 0.00 0.00 44.89 5.14
247 248 3.468063 CCCTACCATCGGGCCTAC 58.532 66.667 0.84 0.00 37.90 3.18
248 249 1.152312 CCCTACCATCGGGCCTACT 60.152 63.158 0.84 0.00 37.90 2.57
249 250 0.763223 CCCTACCATCGGGCCTACTT 60.763 60.000 0.84 0.00 37.90 2.24
250 251 1.129058 CCTACCATCGGGCCTACTTT 58.871 55.000 0.84 0.00 37.90 2.66
251 252 1.489230 CCTACCATCGGGCCTACTTTT 59.511 52.381 0.84 0.00 37.90 2.27
252 253 2.484947 CCTACCATCGGGCCTACTTTTC 60.485 54.545 0.84 0.00 37.90 2.29
253 254 0.988832 ACCATCGGGCCTACTTTTCA 59.011 50.000 0.84 0.00 37.90 2.69
254 255 1.353022 ACCATCGGGCCTACTTTTCAA 59.647 47.619 0.84 0.00 37.90 2.69
255 256 2.017049 CCATCGGGCCTACTTTTCAAG 58.983 52.381 0.84 0.00 0.00 3.02
256 257 2.618045 CCATCGGGCCTACTTTTCAAGT 60.618 50.000 0.84 0.00 45.40 3.16
257 258 2.467566 TCGGGCCTACTTTTCAAGTC 57.532 50.000 0.84 0.00 41.77 3.01
258 259 1.002773 TCGGGCCTACTTTTCAAGTCC 59.997 52.381 0.84 0.00 41.77 3.85
259 260 1.271163 CGGGCCTACTTTTCAAGTCCA 60.271 52.381 0.84 0.00 41.77 4.02
260 261 2.812613 CGGGCCTACTTTTCAAGTCCAA 60.813 50.000 0.84 0.00 41.77 3.53
261 262 2.820197 GGGCCTACTTTTCAAGTCCAAG 59.180 50.000 0.84 0.00 41.77 3.61
262 263 2.229062 GGCCTACTTTTCAAGTCCAAGC 59.771 50.000 0.00 0.00 41.77 4.01
263 264 2.229062 GCCTACTTTTCAAGTCCAAGCC 59.771 50.000 0.00 0.00 41.77 4.35
264 265 2.820197 CCTACTTTTCAAGTCCAAGCCC 59.180 50.000 0.00 0.00 41.77 5.19
265 266 1.318576 ACTTTTCAAGTCCAAGCCCG 58.681 50.000 0.00 0.00 37.02 6.13
266 267 0.598065 CTTTTCAAGTCCAAGCCCGG 59.402 55.000 0.00 0.00 0.00 5.73
267 268 1.460273 TTTTCAAGTCCAAGCCCGGC 61.460 55.000 0.00 0.00 0.00 6.13
268 269 3.860930 TTCAAGTCCAAGCCCGGCC 62.861 63.158 5.55 0.00 0.00 6.13
275 276 4.113815 CAAGCCCGGCCCATCTGA 62.114 66.667 5.55 0.00 0.00 3.27
276 277 3.099170 AAGCCCGGCCCATCTGAT 61.099 61.111 5.55 0.00 0.00 2.90
277 278 1.770110 AAGCCCGGCCCATCTGATA 60.770 57.895 5.55 0.00 0.00 2.15
278 279 1.352622 AAGCCCGGCCCATCTGATAA 61.353 55.000 5.55 0.00 0.00 1.75
279 280 1.150536 GCCCGGCCCATCTGATAAA 59.849 57.895 0.00 0.00 0.00 1.40
280 281 0.467290 GCCCGGCCCATCTGATAAAA 60.467 55.000 0.00 0.00 0.00 1.52
281 282 2.026905 GCCCGGCCCATCTGATAAAAA 61.027 52.381 0.00 0.00 0.00 1.94
282 283 1.956477 CCCGGCCCATCTGATAAAAAG 59.044 52.381 0.00 0.00 0.00 2.27
283 284 1.338020 CCGGCCCATCTGATAAAAAGC 59.662 52.381 0.00 0.00 0.00 3.51
284 285 1.338020 CGGCCCATCTGATAAAAAGCC 59.662 52.381 0.00 0.00 35.78 4.35
285 286 1.688735 GGCCCATCTGATAAAAAGCCC 59.311 52.381 0.00 0.00 32.93 5.19
286 287 2.670939 GCCCATCTGATAAAAAGCCCT 58.329 47.619 0.00 0.00 0.00 5.19
287 288 2.363359 GCCCATCTGATAAAAAGCCCTG 59.637 50.000 0.00 0.00 0.00 4.45
288 289 3.902218 CCCATCTGATAAAAAGCCCTGA 58.098 45.455 0.00 0.00 0.00 3.86
289 290 4.280819 CCCATCTGATAAAAAGCCCTGAA 58.719 43.478 0.00 0.00 0.00 3.02
290 291 4.711355 CCCATCTGATAAAAAGCCCTGAAA 59.289 41.667 0.00 0.00 0.00 2.69
291 292 5.187576 CCCATCTGATAAAAAGCCCTGAAAA 59.812 40.000 0.00 0.00 0.00 2.29
292 293 6.335777 CCATCTGATAAAAAGCCCTGAAAAG 58.664 40.000 0.00 0.00 0.00 2.27
293 294 5.391312 TCTGATAAAAAGCCCTGAAAAGC 57.609 39.130 0.00 0.00 0.00 3.51
294 295 4.220602 TCTGATAAAAAGCCCTGAAAAGCC 59.779 41.667 0.00 0.00 0.00 4.35
295 296 3.260632 TGATAAAAAGCCCTGAAAAGCCC 59.739 43.478 0.00 0.00 0.00 5.19
296 297 1.806496 AAAAAGCCCTGAAAAGCCCT 58.194 45.000 0.00 0.00 0.00 5.19
297 298 1.806496 AAAAGCCCTGAAAAGCCCTT 58.194 45.000 0.00 0.00 0.00 3.95
298 299 2.694616 AAAGCCCTGAAAAGCCCTTA 57.305 45.000 0.00 0.00 0.00 2.69
299 300 2.222227 AAGCCCTGAAAAGCCCTTAG 57.778 50.000 0.00 0.00 0.00 2.18
300 301 0.332972 AGCCCTGAAAAGCCCTTAGG 59.667 55.000 0.00 0.00 0.00 2.69
335 336 4.976540 GGCTAGGCCTCTTCCTTATAAA 57.023 45.455 9.68 0.00 46.69 1.40
336 337 5.306114 GGCTAGGCCTCTTCCTTATAAAA 57.694 43.478 9.68 0.00 46.69 1.52
337 338 5.882040 GGCTAGGCCTCTTCCTTATAAAAT 58.118 41.667 9.68 0.00 46.69 1.82
338 339 5.707764 GGCTAGGCCTCTTCCTTATAAAATG 59.292 44.000 9.68 0.00 46.69 2.32
339 340 5.182190 GCTAGGCCTCTTCCTTATAAAATGC 59.818 44.000 9.68 0.00 37.66 3.56
340 341 4.474394 AGGCCTCTTCCTTATAAAATGCC 58.526 43.478 0.00 0.00 30.82 4.40
341 342 4.079212 AGGCCTCTTCCTTATAAAATGCCA 60.079 41.667 0.00 0.00 37.62 4.92
342 343 4.649218 GGCCTCTTCCTTATAAAATGCCAA 59.351 41.667 0.00 0.00 35.30 4.52
343 344 5.305386 GGCCTCTTCCTTATAAAATGCCAAT 59.695 40.000 0.00 0.00 35.30 3.16
344 345 6.493458 GGCCTCTTCCTTATAAAATGCCAATA 59.507 38.462 0.00 0.00 35.30 1.90
345 346 7.179160 GGCCTCTTCCTTATAAAATGCCAATAT 59.821 37.037 0.00 0.00 35.30 1.28
346 347 9.243105 GCCTCTTCCTTATAAAATGCCAATATA 57.757 33.333 0.00 0.00 0.00 0.86
352 353 8.802267 TCCTTATAAAATGCCAATATACCAAGC 58.198 33.333 0.00 0.00 0.00 4.01
353 354 8.034804 CCTTATAAAATGCCAATATACCAAGCC 58.965 37.037 0.00 0.00 0.00 4.35
354 355 4.687901 AAAATGCCAATATACCAAGCCC 57.312 40.909 0.00 0.00 0.00 5.19
355 356 3.326946 AATGCCAATATACCAAGCCCA 57.673 42.857 0.00 0.00 0.00 5.36
356 357 2.836636 TGCCAATATACCAAGCCCAA 57.163 45.000 0.00 0.00 0.00 4.12
357 358 2.665165 TGCCAATATACCAAGCCCAAG 58.335 47.619 0.00 0.00 0.00 3.61
358 359 1.341209 GCCAATATACCAAGCCCAAGC 59.659 52.381 0.00 0.00 40.32 4.01
359 360 1.963515 CCAATATACCAAGCCCAAGCC 59.036 52.381 0.00 0.00 41.25 4.35
360 361 1.963515 CAATATACCAAGCCCAAGCCC 59.036 52.381 0.00 0.00 41.25 5.19
361 362 0.110486 ATATACCAAGCCCAAGCCCG 59.890 55.000 0.00 0.00 41.25 6.13
362 363 1.276140 TATACCAAGCCCAAGCCCGT 61.276 55.000 0.00 0.00 41.25 5.28
363 364 2.552231 ATACCAAGCCCAAGCCCGTC 62.552 60.000 0.00 0.00 41.25 4.79
365 366 4.659172 CAAGCCCAAGCCCGTCCA 62.659 66.667 0.00 0.00 41.25 4.02
366 367 4.351054 AAGCCCAAGCCCGTCCAG 62.351 66.667 0.00 0.00 41.25 3.86
378 379 4.729918 GTCCAGGCCCTGCTGGTG 62.730 72.222 4.81 0.37 41.28 4.17
385 386 3.970410 CCCTGCTGGTGGGCTCAA 61.970 66.667 9.00 0.00 37.99 3.02
386 387 2.115910 CCTGCTGGTGGGCTCAAA 59.884 61.111 0.51 0.00 0.00 2.69
387 388 1.531365 CCTGCTGGTGGGCTCAAAA 60.531 57.895 0.51 0.00 0.00 2.44
388 389 1.662044 CTGCTGGTGGGCTCAAAAC 59.338 57.895 0.00 0.00 0.00 2.43
389 390 0.825010 CTGCTGGTGGGCTCAAAACT 60.825 55.000 0.00 0.00 0.00 2.66
390 391 0.823356 TGCTGGTGGGCTCAAAACTC 60.823 55.000 0.00 0.00 0.00 3.01
391 392 0.823356 GCTGGTGGGCTCAAAACTCA 60.823 55.000 0.00 0.00 0.00 3.41
392 393 1.242076 CTGGTGGGCTCAAAACTCAG 58.758 55.000 0.00 0.00 0.00 3.35
393 394 0.178992 TGGTGGGCTCAAAACTCAGG 60.179 55.000 0.00 0.00 0.00 3.86
394 395 1.527433 GGTGGGCTCAAAACTCAGGC 61.527 60.000 0.00 0.00 34.44 4.85
396 397 3.686760 GGCTCAAAACTCAGGCCC 58.313 61.111 0.00 0.00 37.12 5.80
397 398 1.228552 GGCTCAAAACTCAGGCCCA 60.229 57.895 0.00 0.00 37.12 5.36
398 399 0.827507 GGCTCAAAACTCAGGCCCAA 60.828 55.000 0.00 0.00 37.12 4.12
399 400 0.600057 GCTCAAAACTCAGGCCCAAG 59.400 55.000 0.00 0.00 0.00 3.61
400 401 0.600057 CTCAAAACTCAGGCCCAAGC 59.400 55.000 0.00 0.00 38.76 4.01
444 445 2.278332 GCCTAGGCCCTGGATTTTAG 57.722 55.000 24.19 0.33 34.56 1.85
445 446 1.202940 GCCTAGGCCCTGGATTTTAGG 60.203 57.143 24.19 10.45 34.56 2.69
450 451 4.579127 CCTGGATTTTAGGGCCGG 57.421 61.111 0.00 0.00 0.00 6.13
451 452 1.152756 CCTGGATTTTAGGGCCGGG 60.153 63.158 2.18 0.00 41.55 5.73
452 453 1.828224 CTGGATTTTAGGGCCGGGC 60.828 63.158 22.00 22.00 0.00 6.13
493 494 2.765807 CCGGAGATGGCCAGGACT 60.766 66.667 13.05 10.74 0.00 3.85
494 495 1.457643 CCGGAGATGGCCAGGACTA 60.458 63.158 13.05 0.00 0.00 2.59
495 496 1.048724 CCGGAGATGGCCAGGACTAA 61.049 60.000 13.05 0.00 0.00 2.24
496 497 0.390860 CGGAGATGGCCAGGACTAAG 59.609 60.000 13.05 4.63 0.00 2.18
497 498 0.107643 GGAGATGGCCAGGACTAAGC 59.892 60.000 13.05 0.00 0.00 3.09
499 500 1.149401 GATGGCCAGGACTAAGCCC 59.851 63.158 13.05 0.00 46.55 5.19
500 501 1.619363 ATGGCCAGGACTAAGCCCA 60.619 57.895 13.05 0.00 46.55 5.36
501 502 1.639635 ATGGCCAGGACTAAGCCCAG 61.640 60.000 13.05 0.00 46.55 4.45
502 503 1.995626 GGCCAGGACTAAGCCCAGA 60.996 63.158 0.00 0.00 41.00 3.86
503 504 1.348775 GGCCAGGACTAAGCCCAGAT 61.349 60.000 0.00 0.00 41.00 2.90
504 505 1.424638 GCCAGGACTAAGCCCAGATA 58.575 55.000 0.00 0.00 0.00 1.98
505 506 1.768870 GCCAGGACTAAGCCCAGATAA 59.231 52.381 0.00 0.00 0.00 1.75
506 507 2.485657 GCCAGGACTAAGCCCAGATAAC 60.486 54.545 0.00 0.00 0.00 1.89
507 508 2.104963 CCAGGACTAAGCCCAGATAACC 59.895 54.545 0.00 0.00 0.00 2.85
508 509 2.771943 CAGGACTAAGCCCAGATAACCA 59.228 50.000 0.00 0.00 0.00 3.67
509 510 3.199946 CAGGACTAAGCCCAGATAACCAA 59.800 47.826 0.00 0.00 0.00 3.67
510 511 3.850173 AGGACTAAGCCCAGATAACCAAA 59.150 43.478 0.00 0.00 0.00 3.28
511 512 4.478686 AGGACTAAGCCCAGATAACCAAAT 59.521 41.667 0.00 0.00 0.00 2.32
512 513 5.670361 AGGACTAAGCCCAGATAACCAAATA 59.330 40.000 0.00 0.00 0.00 1.40
513 514 5.998363 GGACTAAGCCCAGATAACCAAATAG 59.002 44.000 0.00 0.00 0.00 1.73
514 515 5.941788 ACTAAGCCCAGATAACCAAATAGG 58.058 41.667 0.00 0.00 45.67 2.57
515 516 5.670361 ACTAAGCCCAGATAACCAAATAGGA 59.330 40.000 0.00 0.00 41.22 2.94
516 517 4.439253 AGCCCAGATAACCAAATAGGAC 57.561 45.455 0.00 0.00 41.22 3.85
517 518 3.785887 AGCCCAGATAACCAAATAGGACA 59.214 43.478 0.00 0.00 41.22 4.02
518 519 3.883489 GCCCAGATAACCAAATAGGACAC 59.117 47.826 0.00 0.00 41.22 3.67
519 520 4.385310 GCCCAGATAACCAAATAGGACACT 60.385 45.833 0.00 0.00 41.22 3.55
520 521 5.755849 CCCAGATAACCAAATAGGACACTT 58.244 41.667 0.00 0.00 41.22 3.16
521 522 6.187682 CCCAGATAACCAAATAGGACACTTT 58.812 40.000 0.00 0.00 41.22 2.66
522 523 7.343357 CCCAGATAACCAAATAGGACACTTTA 58.657 38.462 0.00 0.00 41.22 1.85
523 524 7.998964 CCCAGATAACCAAATAGGACACTTTAT 59.001 37.037 0.00 0.00 41.22 1.40
524 525 9.408648 CCAGATAACCAAATAGGACACTTTATT 57.591 33.333 0.00 0.00 41.22 1.40
526 527 9.628500 AGATAACCAAATAGGACACTTTATTCC 57.372 33.333 0.00 0.00 41.22 3.01
527 528 8.762481 ATAACCAAATAGGACACTTTATTCCC 57.238 34.615 0.00 0.00 41.22 3.97
528 529 5.190677 ACCAAATAGGACACTTTATTCCCG 58.809 41.667 0.00 0.00 41.22 5.14
529 530 5.190677 CCAAATAGGACACTTTATTCCCGT 58.809 41.667 0.00 0.00 41.22 5.28
530 531 6.070078 ACCAAATAGGACACTTTATTCCCGTA 60.070 38.462 0.00 0.00 41.22 4.02
531 532 6.259387 CCAAATAGGACACTTTATTCCCGTAC 59.741 42.308 0.00 0.00 41.22 3.67
532 533 3.515330 AGGACACTTTATTCCCGTACG 57.485 47.619 8.69 8.69 31.51 3.67
533 534 3.091545 AGGACACTTTATTCCCGTACGA 58.908 45.455 18.76 0.00 31.51 3.43
534 535 3.129988 AGGACACTTTATTCCCGTACGAG 59.870 47.826 18.76 2.72 31.51 4.18
535 536 2.856557 GACACTTTATTCCCGTACGAGC 59.143 50.000 18.76 0.00 0.00 5.03
536 537 2.199236 CACTTTATTCCCGTACGAGCC 58.801 52.381 18.76 0.00 0.00 4.70
537 538 2.105766 ACTTTATTCCCGTACGAGCCT 58.894 47.619 18.76 1.12 0.00 4.58
538 539 3.067180 CACTTTATTCCCGTACGAGCCTA 59.933 47.826 18.76 0.09 0.00 3.93
539 540 3.317430 ACTTTATTCCCGTACGAGCCTAG 59.683 47.826 18.76 7.44 0.00 3.02
540 541 2.645838 TATTCCCGTACGAGCCTAGT 57.354 50.000 18.76 0.00 0.00 2.57
541 542 1.772836 ATTCCCGTACGAGCCTAGTT 58.227 50.000 18.76 0.00 0.00 2.24
542 543 2.418368 TTCCCGTACGAGCCTAGTTA 57.582 50.000 18.76 0.00 0.00 2.24
543 544 2.645838 TCCCGTACGAGCCTAGTTAT 57.354 50.000 18.76 0.00 0.00 1.89
544 545 2.936202 TCCCGTACGAGCCTAGTTATT 58.064 47.619 18.76 0.00 0.00 1.40
545 546 4.085357 TCCCGTACGAGCCTAGTTATTA 57.915 45.455 18.76 0.00 0.00 0.98
546 547 4.067896 TCCCGTACGAGCCTAGTTATTAG 58.932 47.826 18.76 0.00 0.00 1.73
555 556 2.973945 CCTAGTTATTAGGGCGGATGC 58.026 52.381 0.00 0.00 44.57 3.91
556 557 2.607187 CTAGTTATTAGGGCGGATGCG 58.393 52.381 0.65 0.65 44.10 4.73
557 558 0.034896 AGTTATTAGGGCGGATGCGG 59.965 55.000 9.20 0.00 44.10 5.69
558 559 0.953960 GTTATTAGGGCGGATGCGGG 60.954 60.000 9.20 0.00 44.10 6.13
559 560 2.741486 TTATTAGGGCGGATGCGGGC 62.741 60.000 9.20 1.17 44.10 6.13
561 562 4.926162 TAGGGCGGATGCGGGCTA 62.926 66.667 9.20 0.00 44.10 3.93
565 566 4.221422 GCGGATGCGGGCTACTGA 62.221 66.667 9.20 0.00 0.00 3.41
566 567 2.499205 CGGATGCGGGCTACTGAA 59.501 61.111 0.00 0.00 0.00 3.02
567 568 1.883084 CGGATGCGGGCTACTGAAC 60.883 63.158 0.00 0.00 0.00 3.18
568 569 1.220749 GGATGCGGGCTACTGAACA 59.779 57.895 0.00 0.00 0.00 3.18
569 570 1.090052 GGATGCGGGCTACTGAACAC 61.090 60.000 0.00 0.00 0.00 3.32
570 571 0.391130 GATGCGGGCTACTGAACACA 60.391 55.000 0.00 0.00 0.00 3.72
571 572 0.253044 ATGCGGGCTACTGAACACAT 59.747 50.000 0.00 0.00 0.00 3.21
572 573 0.391130 TGCGGGCTACTGAACACATC 60.391 55.000 0.00 0.00 0.00 3.06
573 574 1.090052 GCGGGCTACTGAACACATCC 61.090 60.000 0.00 0.00 0.00 3.51
574 575 0.249120 CGGGCTACTGAACACATCCA 59.751 55.000 0.00 0.00 0.00 3.41
587 588 3.966979 ACACATCCATATTGACCAAGCA 58.033 40.909 0.00 0.00 0.00 3.91
592 593 1.406539 CCATATTGACCAAGCACTGCC 59.593 52.381 0.00 0.00 0.00 4.85
594 595 1.825090 TATTGACCAAGCACTGCCTG 58.175 50.000 0.00 0.00 0.00 4.85
628 629 5.818136 TTTGAAGTTTGAACAGAGACAGG 57.182 39.130 0.00 0.00 0.00 4.00
638 647 1.664965 AGAGACAGGCGCAACGTTC 60.665 57.895 10.83 0.49 0.00 3.95
683 692 2.203337 GCACCACCAGCCTTCACA 60.203 61.111 0.00 0.00 0.00 3.58
684 693 2.555547 GCACCACCAGCCTTCACAC 61.556 63.158 0.00 0.00 0.00 3.82
689 698 1.079819 ACCAGCCTTCACACGATCG 60.080 57.895 14.88 14.88 0.00 3.69
775 798 1.063792 CCATCATCAATCCACCCACCA 60.064 52.381 0.00 0.00 0.00 4.17
960 993 4.548513 CTCCCTCCCTCCCTCCCG 62.549 77.778 0.00 0.00 0.00 5.14
963 996 4.862823 CCTCCCTCCCTCCCGTCC 62.863 77.778 0.00 0.00 0.00 4.79
964 997 4.862823 CTCCCTCCCTCCCGTCCC 62.863 77.778 0.00 0.00 0.00 4.46
977 1012 3.961414 GTCCCGGGCACTTTCCCA 61.961 66.667 18.49 0.00 46.92 4.37
984 1020 0.526211 GGGCACTTTCCCAAATCGAC 59.474 55.000 0.00 0.00 45.82 4.20
986 1022 1.243902 GCACTTTCCCAAATCGACCA 58.756 50.000 0.00 0.00 0.00 4.02
990 1026 2.084546 CTTTCCCAAATCGACCAGGAC 58.915 52.381 0.00 0.00 0.00 3.85
1057 1093 2.992689 TCGCCTACAGGTTCGCCA 60.993 61.111 0.00 0.00 40.60 5.69
1059 1095 2.388232 CGCCTACAGGTTCGCCAAC 61.388 63.158 0.00 0.00 40.60 3.77
1068 1104 1.574702 GGTTCGCCAACTTCCTTCCG 61.575 60.000 0.00 0.00 37.19 4.30
1074 1110 1.971695 CAACTTCCTTCCGGTGGCC 60.972 63.158 0.00 0.00 0.00 5.36
1079 1115 3.787001 CCTTCCGGTGGCCCTCTC 61.787 72.222 0.00 0.00 0.00 3.20
1090 1126 4.479993 CCCTCTCCCCGCTGCTTG 62.480 72.222 0.00 0.00 0.00 4.01
1095 1131 1.377202 CTCCCCGCTGCTTGCTTAA 60.377 57.895 0.00 0.00 40.11 1.85
1096 1132 0.749454 CTCCCCGCTGCTTGCTTAAT 60.749 55.000 0.00 0.00 40.11 1.40
1107 1143 2.825532 GCTTGCTTAATTTGGGTCAGGA 59.174 45.455 0.00 0.00 0.00 3.86
1109 1145 4.809673 CTTGCTTAATTTGGGTCAGGAAC 58.190 43.478 0.00 0.00 0.00 3.62
1120 1158 1.420138 GGTCAGGAACCCAGAGTCAAA 59.580 52.381 0.00 0.00 42.85 2.69
1121 1159 2.495084 GTCAGGAACCCAGAGTCAAAC 58.505 52.381 0.00 0.00 0.00 2.93
1126 1164 2.650322 GAACCCAGAGTCAAACAACCA 58.350 47.619 0.00 0.00 0.00 3.67
1133 1171 4.637534 CCAGAGTCAAACAACCATAGGATG 59.362 45.833 0.00 0.00 0.00 3.51
1134 1172 4.095483 CAGAGTCAAACAACCATAGGATGC 59.905 45.833 0.00 0.00 0.00 3.91
1136 1174 4.012374 AGTCAAACAACCATAGGATGCAG 58.988 43.478 0.00 0.00 0.00 4.41
1139 1177 4.458989 TCAAACAACCATAGGATGCAGAAC 59.541 41.667 0.00 0.00 0.00 3.01
1142 1180 3.780294 ACAACCATAGGATGCAGAACCTA 59.220 43.478 15.91 15.91 41.99 3.08
1144 1182 3.928754 ACCATAGGATGCAGAACCTAGA 58.071 45.455 17.67 3.75 41.24 2.43
1153 1191 3.942829 TGCAGAACCTAGATTGGTCTTG 58.057 45.455 0.00 0.00 39.83 3.02
1154 1192 2.680339 GCAGAACCTAGATTGGTCTTGC 59.320 50.000 0.00 0.00 39.83 4.01
1155 1193 3.620966 GCAGAACCTAGATTGGTCTTGCT 60.621 47.826 11.86 0.00 41.74 3.91
1157 1195 2.969628 ACCTAGATTGGTCTTGCTCG 57.030 50.000 0.00 0.00 34.86 5.03
1158 1196 1.482593 ACCTAGATTGGTCTTGCTCGG 59.517 52.381 0.00 0.00 34.86 4.63
1159 1197 1.757118 CCTAGATTGGTCTTGCTCGGA 59.243 52.381 0.00 0.00 35.87 4.55
1161 1199 0.539051 AGATTGGTCTTGCTCGGAGG 59.461 55.000 7.20 0.00 0.00 4.30
1162 1200 0.537188 GATTGGTCTTGCTCGGAGGA 59.463 55.000 7.20 0.00 0.00 3.71
1163 1201 0.539051 ATTGGTCTTGCTCGGAGGAG 59.461 55.000 7.20 0.00 43.46 3.69
1176 1214 2.011540 GGAGGAGCCGTAACTTCTTG 57.988 55.000 0.00 0.00 0.00 3.02
1178 1216 0.389948 AGGAGCCGTAACTTCTTGCG 60.390 55.000 0.00 0.00 35.45 4.85
1188 1226 2.559998 ACTTCTTGCGGTGTTTGTTG 57.440 45.000 0.00 0.00 0.00 3.33
1192 1230 1.400142 TCTTGCGGTGTTTGTTGTCAG 59.600 47.619 0.00 0.00 0.00 3.51
1201 1239 4.873827 GGTGTTTGTTGTCAGAAGTCTGTA 59.126 41.667 8.14 0.00 44.12 2.74
1207 1245 6.073327 TGTTGTCAGAAGTCTGTACTACTG 57.927 41.667 8.14 0.00 44.12 2.74
1208 1246 5.593095 TGTTGTCAGAAGTCTGTACTACTGT 59.407 40.000 8.14 0.00 44.12 3.55
1211 1249 4.760715 GTCAGAAGTCTGTACTACTGTCCA 59.239 45.833 8.14 0.00 44.12 4.02
1212 1250 5.004448 TCAGAAGTCTGTACTACTGTCCAG 58.996 45.833 8.14 0.00 44.12 3.86
1217 1259 3.506455 GTCTGTACTACTGTCCAGCAAGA 59.494 47.826 0.00 0.00 31.29 3.02
1225 1267 5.645497 ACTACTGTCCAGCAAGATCAATTTC 59.355 40.000 0.00 0.00 0.00 2.17
1229 1271 5.072055 TGTCCAGCAAGATCAATTTCAGAA 58.928 37.500 0.00 0.00 0.00 3.02
1235 1277 7.148120 CCAGCAAGATCAATTTCAGAATACTGT 60.148 37.037 0.00 0.00 43.81 3.55
1237 1279 9.453572 AGCAAGATCAATTTCAGAATACTGTTA 57.546 29.630 0.00 0.00 43.81 2.41
1306 1362 9.603921 TTATTATAGTTATTAGTTATGGGCGGC 57.396 33.333 0.00 0.00 0.00 6.53
1307 1363 5.757099 ATAGTTATTAGTTATGGGCGGCT 57.243 39.130 9.56 0.00 0.00 5.52
1308 1364 3.740115 AGTTATTAGTTATGGGCGGCTG 58.260 45.455 9.56 0.00 0.00 4.85
1310 1366 0.474184 ATTAGTTATGGGCGGCTGCT 59.526 50.000 18.85 0.00 42.25 4.24
1311 1367 0.463654 TTAGTTATGGGCGGCTGCTG 60.464 55.000 18.85 3.55 42.25 4.41
1312 1368 2.324014 TAGTTATGGGCGGCTGCTGG 62.324 60.000 18.85 0.00 42.25 4.85
1320 1376 4.537433 CGGCTGCTGGCTAGGGAC 62.537 72.222 15.09 0.00 41.46 4.46
1321 1377 3.086600 GGCTGCTGGCTAGGGACT 61.087 66.667 10.05 0.00 41.46 3.85
1322 1378 2.503546 GCTGCTGGCTAGGGACTC 59.496 66.667 0.00 0.00 41.75 3.36
1323 1379 3.100503 GCTGCTGGCTAGGGACTCC 62.101 68.421 0.00 0.00 41.75 3.85
1328 1398 1.768870 GCTGGCTAGGGACTCCAAATA 59.231 52.381 0.00 0.00 41.75 1.40
1329 1399 2.224402 GCTGGCTAGGGACTCCAAATAG 60.224 54.545 0.00 0.00 41.75 1.73
1331 1401 3.906846 CTGGCTAGGGACTCCAAATAGAT 59.093 47.826 0.00 0.00 41.75 1.98
1341 1411 7.736691 AGGGACTCCAAATAGATTGATCATAGA 59.263 37.037 0.00 0.00 41.85 1.98
1342 1412 8.040132 GGGACTCCAAATAGATTGATCATAGAG 58.960 40.741 0.00 0.00 41.85 2.43
1343 1413 8.811017 GGACTCCAAATAGATTGATCATAGAGA 58.189 37.037 0.00 0.00 41.85 3.10
1344 1414 9.859427 GACTCCAAATAGATTGATCATAGAGAG 57.141 37.037 0.00 0.00 41.85 3.20
1345 1415 9.599056 ACTCCAAATAGATTGATCATAGAGAGA 57.401 33.333 0.00 0.00 41.85 3.10
1347 1417 8.530311 TCCAAATAGATTGATCATAGAGAGAGC 58.470 37.037 0.00 0.00 41.85 4.09
1348 1418 7.488792 CCAAATAGATTGATCATAGAGAGAGCG 59.511 40.741 0.00 0.00 41.85 5.03
1349 1419 7.701539 AATAGATTGATCATAGAGAGAGCGT 57.298 36.000 0.00 0.00 0.00 5.07
1350 1420 5.375417 AGATTGATCATAGAGAGAGCGTG 57.625 43.478 0.00 0.00 0.00 5.34
1351 1421 3.361794 TTGATCATAGAGAGAGCGTGC 57.638 47.619 0.00 0.00 0.00 5.34
1352 1422 1.611006 TGATCATAGAGAGAGCGTGCC 59.389 52.381 0.00 0.00 0.00 5.01
1353 1423 0.595588 ATCATAGAGAGAGCGTGCCG 59.404 55.000 0.00 0.00 0.00 5.69
1354 1424 1.007964 CATAGAGAGAGCGTGCCGG 60.008 63.158 0.00 0.00 0.00 6.13
1355 1425 1.454111 ATAGAGAGAGCGTGCCGGT 60.454 57.895 1.90 0.00 41.33 5.28
1356 1426 1.038130 ATAGAGAGAGCGTGCCGGTT 61.038 55.000 1.90 0.00 37.83 4.44
1357 1427 1.248785 TAGAGAGAGCGTGCCGGTTT 61.249 55.000 1.90 0.00 37.83 3.27
1358 1428 2.048127 AGAGAGCGTGCCGGTTTC 60.048 61.111 1.90 8.55 37.83 2.78
1359 1429 3.479269 GAGAGCGTGCCGGTTTCG 61.479 66.667 1.90 7.02 37.83 3.46
1360 1430 3.909258 GAGAGCGTGCCGGTTTCGA 62.909 63.158 16.36 0.00 37.83 3.71
1361 1431 3.774702 GAGCGTGCCGGTTTCGAC 61.775 66.667 16.36 9.21 37.83 4.20
1362 1432 4.595538 AGCGTGCCGGTTTCGACA 62.596 61.111 16.36 0.00 39.00 4.35
1363 1433 3.641986 GCGTGCCGGTTTCGACAA 61.642 61.111 16.36 0.00 39.00 3.18
1364 1434 3.015677 CGTGCCGGTTTCGACAAA 58.984 55.556 1.90 0.00 39.00 2.83
1365 1435 1.083015 CGTGCCGGTTTCGACAAAG 60.083 57.895 1.90 0.00 39.00 2.77
1366 1436 1.768112 CGTGCCGGTTTCGACAAAGT 61.768 55.000 1.90 0.00 39.00 2.66
1367 1437 0.316689 GTGCCGGTTTCGACAAAGTG 60.317 55.000 1.90 0.00 39.00 3.16
1368 1438 0.462225 TGCCGGTTTCGACAAAGTGA 60.462 50.000 1.90 0.00 39.00 3.41
1369 1439 0.658897 GCCGGTTTCGACAAAGTGAA 59.341 50.000 1.90 0.00 39.00 3.18
1370 1440 1.333791 GCCGGTTTCGACAAAGTGAAG 60.334 52.381 1.90 0.00 39.00 3.02
1371 1441 1.937899 CCGGTTTCGACAAAGTGAAGT 59.062 47.619 0.00 0.00 39.00 3.01
1372 1442 2.286184 CCGGTTTCGACAAAGTGAAGTG 60.286 50.000 0.00 0.00 39.00 3.16
1373 1443 2.286184 CGGTTTCGACAAAGTGAAGTGG 60.286 50.000 0.00 0.00 39.00 4.00
1374 1444 2.940410 GGTTTCGACAAAGTGAAGTGGA 59.060 45.455 0.00 0.00 0.00 4.02
1375 1445 3.564225 GGTTTCGACAAAGTGAAGTGGAT 59.436 43.478 0.00 0.00 0.00 3.41
1376 1446 4.319549 GGTTTCGACAAAGTGAAGTGGATC 60.320 45.833 0.00 0.00 0.00 3.36
1377 1447 3.744238 TCGACAAAGTGAAGTGGATCA 57.256 42.857 0.00 0.00 0.00 2.92
1378 1448 4.271696 TCGACAAAGTGAAGTGGATCAT 57.728 40.909 0.00 0.00 0.00 2.45
1379 1449 4.245660 TCGACAAAGTGAAGTGGATCATC 58.754 43.478 0.00 0.00 0.00 2.92
1380 1450 4.021104 TCGACAAAGTGAAGTGGATCATCT 60.021 41.667 0.00 0.00 0.00 2.90
1381 1451 5.185056 TCGACAAAGTGAAGTGGATCATCTA 59.815 40.000 0.00 0.00 0.00 1.98
1382 1452 6.045318 CGACAAAGTGAAGTGGATCATCTAT 58.955 40.000 0.00 0.00 0.00 1.98
1383 1453 6.199908 CGACAAAGTGAAGTGGATCATCTATC 59.800 42.308 0.00 0.00 0.00 2.08
1384 1454 6.950842 ACAAAGTGAAGTGGATCATCTATCA 58.049 36.000 0.00 0.00 36.20 2.15
1413 1483 5.339035 CCCTCTGTTTCTTCCAAGAGATCAT 60.339 44.000 0.00 0.00 36.22 2.45
1414 1484 5.585445 CCTCTGTTTCTTCCAAGAGATCATG 59.415 44.000 0.00 0.00 36.22 3.07
1430 1500 6.795144 AGATCATGATCTCTGAGAAACACT 57.205 37.500 28.92 5.97 44.37 3.55
1431 1501 7.894753 AGATCATGATCTCTGAGAAACACTA 57.105 36.000 28.92 7.41 44.37 2.74
1432 1502 7.944061 AGATCATGATCTCTGAGAAACACTAG 58.056 38.462 28.92 8.87 44.37 2.57
1433 1503 7.779326 AGATCATGATCTCTGAGAAACACTAGA 59.221 37.037 28.92 12.92 44.37 2.43
1434 1504 7.709149 TCATGATCTCTGAGAAACACTAGAA 57.291 36.000 12.00 0.00 0.00 2.10
1435 1505 8.303780 TCATGATCTCTGAGAAACACTAGAAT 57.696 34.615 12.00 0.00 0.00 2.40
1436 1506 8.756927 TCATGATCTCTGAGAAACACTAGAATT 58.243 33.333 12.00 0.00 0.00 2.17
1441 1511 8.178313 TCTCTGAGAAACACTAGAATTACACA 57.822 34.615 4.57 0.00 0.00 3.72
1442 1512 8.638873 TCTCTGAGAAACACTAGAATTACACAA 58.361 33.333 4.57 0.00 0.00 3.33
1443 1513 8.818141 TCTGAGAAACACTAGAATTACACAAG 57.182 34.615 0.00 0.00 0.00 3.16
1444 1514 8.638873 TCTGAGAAACACTAGAATTACACAAGA 58.361 33.333 0.00 0.00 0.00 3.02
1451 1665 8.553459 ACACTAGAATTACACAAGAGGAAATG 57.447 34.615 0.00 0.00 0.00 2.32
1452 1666 7.607991 ACACTAGAATTACACAAGAGGAAATGG 59.392 37.037 0.00 0.00 0.00 3.16
1456 1670 5.841957 ATTACACAAGAGGAAATGGATGC 57.158 39.130 0.00 0.00 0.00 3.91
1457 1671 3.159213 ACACAAGAGGAAATGGATGCA 57.841 42.857 0.00 0.00 0.00 3.96
1459 1673 4.091549 ACACAAGAGGAAATGGATGCAAT 58.908 39.130 0.00 0.00 0.00 3.56
1466 1680 4.581868 AGGAAATGGATGCAATGTTTTGG 58.418 39.130 0.00 0.00 33.22 3.28
1474 1688 1.693062 TGCAATGTTTTGGGTGCAGAT 59.307 42.857 0.00 0.00 41.85 2.90
1475 1689 2.104451 TGCAATGTTTTGGGTGCAGATT 59.896 40.909 0.00 0.00 41.85 2.40
1476 1690 3.323115 TGCAATGTTTTGGGTGCAGATTA 59.677 39.130 0.00 0.00 41.85 1.75
1478 1692 4.754114 GCAATGTTTTGGGTGCAGATTAAA 59.246 37.500 0.00 0.00 36.97 1.52
1483 1697 6.586344 TGTTTTGGGTGCAGATTAAAATTGA 58.414 32.000 0.00 0.00 0.00 2.57
1487 1701 5.076182 TGGGTGCAGATTAAAATTGACTGA 58.924 37.500 0.00 0.00 0.00 3.41
1493 1833 8.025445 GTGCAGATTAAAATTGACTGATGAAGT 58.975 33.333 0.00 0.00 43.85 3.01
1506 1846 9.500785 TTGACTGATGAAGTTACACATTGATAA 57.499 29.630 0.00 0.00 40.07 1.75
1511 1851 8.935844 TGATGAAGTTACACATTGATAACTGAC 58.064 33.333 14.55 12.73 40.04 3.51
1520 1860 7.375834 ACACATTGATAACTGACTAGAAACGA 58.624 34.615 0.00 0.00 0.00 3.85
1531 1872 8.997621 ACTGACTAGAAACGAATAAATAAGCA 57.002 30.769 0.00 0.00 0.00 3.91
1536 1877 9.865321 ACTAGAAACGAATAAATAAGCACTGTA 57.135 29.630 0.00 0.00 0.00 2.74
1551 1892 6.985188 AGCACTGTACGACATAATTTGAAT 57.015 33.333 0.00 0.00 0.00 2.57
1554 1895 8.296713 AGCACTGTACGACATAATTTGAATTTT 58.703 29.630 0.00 0.00 0.00 1.82
1555 1896 9.549509 GCACTGTACGACATAATTTGAATTTTA 57.450 29.630 0.00 0.00 0.00 1.52
1569 1910 6.820470 TTGAATTTTAAACTTGTGAAGGCG 57.180 33.333 0.00 0.00 0.00 5.52
1572 1913 7.136119 TGAATTTTAAACTTGTGAAGGCGTAG 58.864 34.615 0.00 0.00 0.00 3.51
1575 1916 2.457366 AACTTGTGAAGGCGTAGAGG 57.543 50.000 0.00 0.00 0.00 3.69
1576 1917 0.608640 ACTTGTGAAGGCGTAGAGGG 59.391 55.000 0.00 0.00 0.00 4.30
1582 1924 0.108281 GAAGGCGTAGAGGGAACACC 60.108 60.000 0.00 0.00 40.67 4.16
1584 1926 2.508663 GCGTAGAGGGAACACCGC 60.509 66.667 0.00 0.00 46.96 5.68
1585 1927 2.202570 CGTAGAGGGAACACCGCG 60.203 66.667 0.00 0.00 44.78 6.46
1591 1933 3.708734 GGGAACACCGCGTTGTCG 61.709 66.667 10.53 0.00 38.19 4.35
1597 1939 0.509499 ACACCGCGTTGTCGTTTATG 59.491 50.000 2.39 0.00 39.49 1.90
1598 1940 0.179235 CACCGCGTTGTCGTTTATGG 60.179 55.000 4.92 0.00 39.49 2.74
1599 1941 1.225908 CCGCGTTGTCGTTTATGGC 60.226 57.895 4.92 0.00 39.49 4.40
1610 1989 4.226761 GTCGTTTATGGCTTTCAGGTTTG 58.773 43.478 0.00 0.00 0.00 2.93
1611 1990 3.886505 TCGTTTATGGCTTTCAGGTTTGT 59.113 39.130 0.00 0.00 0.00 2.83
1612 1991 5.049267 GTCGTTTATGGCTTTCAGGTTTGTA 60.049 40.000 0.00 0.00 0.00 2.41
1613 1992 5.531659 TCGTTTATGGCTTTCAGGTTTGTAA 59.468 36.000 0.00 0.00 0.00 2.41
1614 1993 6.039493 TCGTTTATGGCTTTCAGGTTTGTAAA 59.961 34.615 0.00 0.00 0.00 2.01
1615 1994 6.362283 CGTTTATGGCTTTCAGGTTTGTAAAG 59.638 38.462 0.00 0.00 34.14 1.85
1618 1997 3.349488 GCTTTCAGGTTTGTAAAGCGT 57.651 42.857 0.00 0.00 43.81 5.07
1619 1998 3.297472 GCTTTCAGGTTTGTAAAGCGTC 58.703 45.455 0.00 0.00 43.81 5.19
1620 1999 3.003378 GCTTTCAGGTTTGTAAAGCGTCT 59.997 43.478 0.00 0.00 43.81 4.18
1621 2000 4.212636 GCTTTCAGGTTTGTAAAGCGTCTA 59.787 41.667 0.00 0.00 43.81 2.59
1627 2006 6.755141 TCAGGTTTGTAAAGCGTCTATATGTC 59.245 38.462 1.41 0.00 41.06 3.06
1632 2011 6.216801 TGTAAAGCGTCTATATGTCCAGTT 57.783 37.500 0.00 0.00 0.00 3.16
1633 2012 6.270815 TGTAAAGCGTCTATATGTCCAGTTC 58.729 40.000 0.00 0.00 0.00 3.01
1634 2013 5.339008 AAAGCGTCTATATGTCCAGTTCA 57.661 39.130 0.00 0.00 0.00 3.18
1647 2026 4.036616 TGTCCAGTTCAATGATGTGTGTTG 59.963 41.667 0.00 0.00 0.00 3.33
1654 2033 6.531240 AGTTCAATGATGTGTGTTGTTTGTTC 59.469 34.615 0.00 0.00 0.00 3.18
1659 2038 4.704540 TGATGTGTGTTGTTTGTTCCTTCT 59.295 37.500 0.00 0.00 0.00 2.85
1662 2041 3.612423 GTGTGTTGTTTGTTCCTTCTTGC 59.388 43.478 0.00 0.00 0.00 4.01
1688 2067 2.213499 GTGGATACTGTGGCTATGCAC 58.787 52.381 0.00 1.48 36.26 4.57
1693 2072 2.795231 ACTGTGGCTATGCACTGAAT 57.205 45.000 0.00 0.00 0.00 2.57
1741 2120 4.355543 CAACATTGGATCAAAGTACGGG 57.644 45.455 0.00 0.00 0.00 5.28
1759 2138 1.283321 GGGAAGCAGATCAGGAAAGGT 59.717 52.381 0.00 0.00 0.00 3.50
1837 2216 2.104331 ACGCCATACTTCCGCTCG 59.896 61.111 0.00 0.00 0.00 5.03
1840 2219 1.437986 GCCATACTTCCGCTCGAGT 59.562 57.895 15.13 0.00 0.00 4.18
1841 2220 0.595310 GCCATACTTCCGCTCGAGTC 60.595 60.000 15.13 5.54 0.00 3.36
1842 2221 0.317103 CCATACTTCCGCTCGAGTCG 60.317 60.000 15.13 17.04 0.00 4.18
1852 2231 3.358076 CTCGAGTCGTTCCTGGGGC 62.358 68.421 13.12 0.00 0.00 5.80
1863 2242 1.444933 TCCTGGGGCTTCTTCAGAAA 58.555 50.000 0.00 0.00 33.07 2.52
1944 2323 4.946478 AGGACTCTGCCTTGTATGATAC 57.054 45.455 0.00 0.00 33.46 2.24
1947 2326 4.101741 GGACTCTGCCTTGTATGATACCTT 59.898 45.833 0.00 0.00 0.00 3.50
2136 2516 2.927856 TGTGCCGGACTGGGATGT 60.928 61.111 5.05 0.00 41.76 3.06
2176 2556 2.551270 AGGGAACTTGCCATCTCTGTA 58.449 47.619 1.70 0.00 37.44 2.74
2177 2557 2.503356 AGGGAACTTGCCATCTCTGTAG 59.497 50.000 1.70 0.00 37.44 2.74
2178 2558 2.284190 GGAACTTGCCATCTCTGTAGC 58.716 52.381 0.00 0.00 0.00 3.58
2179 2559 2.093235 GGAACTTGCCATCTCTGTAGCT 60.093 50.000 0.00 0.00 0.00 3.32
2182 2562 3.636679 ACTTGCCATCTCTGTAGCTCTA 58.363 45.455 0.00 0.00 0.00 2.43
2184 2564 3.304911 TGCCATCTCTGTAGCTCTACT 57.695 47.619 8.34 0.00 37.00 2.57
2185 2565 3.218453 TGCCATCTCTGTAGCTCTACTC 58.782 50.000 8.34 0.00 37.00 2.59
2244 2675 8.865590 ATTTTGGTTGTGTTGATAGTACAAAC 57.134 30.769 0.00 0.00 41.22 2.93
2247 2678 6.350103 TGGTTGTGTTGATAGTACAAACTGA 58.650 36.000 0.00 0.00 41.37 3.41
2275 2706 3.552699 TCTTTTTGTTGTCTACGTCGGTG 59.447 43.478 0.00 0.00 0.00 4.94
2329 2760 6.334989 CAACATGTTTGCCATATTCAGTCAT 58.665 36.000 8.77 0.00 30.71 3.06
2363 2794 2.289002 GGCATTCAGTCTCATAAAGGCG 59.711 50.000 0.00 0.00 33.62 5.52
2367 2798 3.247006 TCAGTCTCATAAAGGCGTTCC 57.753 47.619 0.00 0.00 33.62 3.62
2528 2962 8.816640 AATATACTTCAAAGCCAAACAACAAG 57.183 30.769 0.00 0.00 0.00 3.16
2580 3014 9.396022 CAATATCAATCTAACTTGGTGTACCTT 57.604 33.333 2.32 0.00 36.82 3.50
2599 3033 3.997021 CCTTTTACATCGCTGTTCTGACT 59.003 43.478 0.00 0.00 36.79 3.41
2666 3100 7.657761 AGATTATTACTCCGTTATTTGAGCTGG 59.342 37.037 0.00 0.00 31.65 4.85
2678 3112 7.441157 CGTTATTTGAGCTGGTTTGGATATCTA 59.559 37.037 2.05 0.00 0.00 1.98
2799 3234 6.220201 TCGTTTGAATACAGTGAATGAGACA 58.780 36.000 0.00 0.00 0.00 3.41
2827 3262 1.608055 CACTGGCCTTGAACACATCA 58.392 50.000 3.32 0.00 35.85 3.07
2829 3264 1.171308 CTGGCCTTGAACACATCAGG 58.829 55.000 3.32 0.00 39.77 3.86
2988 3423 5.684184 TCGCGTATGTGTATTACTAGCAAAG 59.316 40.000 5.77 0.00 0.00 2.77
3020 3455 3.244976 GAATCACCGTTCAAGCAATTGG 58.755 45.455 7.72 0.00 0.00 3.16
3048 3484 7.540299 AGGTTTCTGAGTAACTAGAAATCGAG 58.460 38.462 0.00 0.00 44.67 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.125106 GGGTGGGTCGAGATGCAC 60.125 66.667 0.00 0.00 0.00 4.57
1 2 1.995066 ATGGGTGGGTCGAGATGCA 60.995 57.895 0.00 0.00 0.00 3.96
2 3 1.524621 CATGGGTGGGTCGAGATGC 60.525 63.158 0.00 0.00 0.00 3.91
3 4 0.462581 CACATGGGTGGGTCGAGATG 60.463 60.000 0.00 0.00 41.45 2.90
4 5 1.907739 CACATGGGTGGGTCGAGAT 59.092 57.895 0.00 0.00 41.45 2.75
5 6 2.954684 GCACATGGGTGGGTCGAGA 61.955 63.158 0.00 0.00 45.38 4.04
6 7 2.436646 GCACATGGGTGGGTCGAG 60.437 66.667 0.00 0.00 45.38 4.04
7 8 4.028490 GGCACATGGGTGGGTCGA 62.028 66.667 0.00 0.00 45.38 4.20
9 10 3.645268 GAGGGCACATGGGTGGGTC 62.645 68.421 0.00 0.00 45.38 4.46
10 11 3.661648 GAGGGCACATGGGTGGGT 61.662 66.667 0.00 0.00 45.38 4.51
11 12 4.802051 CGAGGGCACATGGGTGGG 62.802 72.222 0.00 0.00 45.38 4.61
12 13 1.695114 TATCGAGGGCACATGGGTGG 61.695 60.000 0.00 0.00 45.38 4.61
14 15 0.397941 CATATCGAGGGCACATGGGT 59.602 55.000 0.00 0.00 0.00 4.51
15 16 0.321919 CCATATCGAGGGCACATGGG 60.322 60.000 0.00 0.00 33.87 4.00
16 17 0.686789 TCCATATCGAGGGCACATGG 59.313 55.000 0.00 0.00 37.98 3.66
17 18 2.235650 AGATCCATATCGAGGGCACATG 59.764 50.000 0.00 0.00 37.19 3.21
18 19 2.499289 GAGATCCATATCGAGGGCACAT 59.501 50.000 0.00 0.00 37.19 3.21
19 20 1.895798 GAGATCCATATCGAGGGCACA 59.104 52.381 0.00 0.00 37.19 4.57
20 21 1.205893 GGAGATCCATATCGAGGGCAC 59.794 57.143 0.00 0.00 37.19 5.01
21 22 1.077828 AGGAGATCCATATCGAGGGCA 59.922 52.381 0.92 0.00 37.19 5.36
22 23 1.754226 GAGGAGATCCATATCGAGGGC 59.246 57.143 0.92 0.00 37.19 5.19
23 24 3.093057 TGAGGAGATCCATATCGAGGG 57.907 52.381 0.92 0.00 37.19 4.30
24 25 3.194542 GGTTGAGGAGATCCATATCGAGG 59.805 52.174 0.92 0.00 37.19 4.63
25 26 4.082300 CAGGTTGAGGAGATCCATATCGAG 60.082 50.000 0.92 0.00 37.19 4.04
26 27 3.829026 CAGGTTGAGGAGATCCATATCGA 59.171 47.826 0.92 0.00 37.19 3.59
27 28 3.056250 CCAGGTTGAGGAGATCCATATCG 60.056 52.174 0.92 0.00 37.19 2.92
28 29 4.163427 TCCAGGTTGAGGAGATCCATATC 58.837 47.826 0.92 0.00 38.89 1.63
29 30 4.219392 TCCAGGTTGAGGAGATCCATAT 57.781 45.455 0.92 0.00 38.89 1.78
30 31 3.706389 TCCAGGTTGAGGAGATCCATA 57.294 47.619 0.92 0.00 38.89 2.74
31 32 2.575921 TCCAGGTTGAGGAGATCCAT 57.424 50.000 0.92 0.00 38.89 3.41
32 33 2.402564 GATCCAGGTTGAGGAGATCCA 58.597 52.381 0.92 0.00 38.83 3.41
33 34 1.342819 CGATCCAGGTTGAGGAGATCC 59.657 57.143 0.00 0.00 38.83 3.36
34 35 1.270041 GCGATCCAGGTTGAGGAGATC 60.270 57.143 0.00 0.00 38.83 2.75
35 36 0.755686 GCGATCCAGGTTGAGGAGAT 59.244 55.000 0.00 0.00 38.83 2.75
36 37 0.324738 AGCGATCCAGGTTGAGGAGA 60.325 55.000 0.00 0.00 38.83 3.71
37 38 1.339610 CTAGCGATCCAGGTTGAGGAG 59.660 57.143 0.00 0.00 38.83 3.69
38 39 1.063942 TCTAGCGATCCAGGTTGAGGA 60.064 52.381 0.00 0.00 39.97 3.71
39 40 1.403814 TCTAGCGATCCAGGTTGAGG 58.596 55.000 0.00 0.00 0.00 3.86
40 41 3.190874 GTTTCTAGCGATCCAGGTTGAG 58.809 50.000 0.00 0.00 0.00 3.02
41 42 2.416836 CGTTTCTAGCGATCCAGGTTGA 60.417 50.000 0.00 0.00 0.00 3.18
42 43 1.927174 CGTTTCTAGCGATCCAGGTTG 59.073 52.381 0.00 0.00 0.00 3.77
43 44 1.134788 CCGTTTCTAGCGATCCAGGTT 60.135 52.381 0.00 0.00 0.00 3.50
44 45 0.460311 CCGTTTCTAGCGATCCAGGT 59.540 55.000 0.00 0.00 0.00 4.00
45 46 0.460311 ACCGTTTCTAGCGATCCAGG 59.540 55.000 0.00 0.00 0.00 4.45
46 47 1.841450 GACCGTTTCTAGCGATCCAG 58.159 55.000 0.00 0.00 0.00 3.86
47 48 0.099968 CGACCGTTTCTAGCGATCCA 59.900 55.000 0.00 0.00 0.00 3.41
48 49 0.379669 TCGACCGTTTCTAGCGATCC 59.620 55.000 0.00 0.00 0.00 3.36
49 50 2.402640 ATCGACCGTTTCTAGCGATC 57.597 50.000 0.00 0.00 37.11 3.69
50 51 2.728922 GAATCGACCGTTTCTAGCGAT 58.271 47.619 0.00 0.00 42.74 4.58
51 52 1.530441 CGAATCGACCGTTTCTAGCGA 60.530 52.381 0.00 0.00 35.32 4.93
52 53 0.838229 CGAATCGACCGTTTCTAGCG 59.162 55.000 0.00 0.00 0.00 4.26
53 54 1.197910 CCGAATCGACCGTTTCTAGC 58.802 55.000 3.36 0.00 0.00 3.42
54 55 1.197910 GCCGAATCGACCGTTTCTAG 58.802 55.000 3.36 0.00 0.00 2.43
55 56 0.179129 GGCCGAATCGACCGTTTCTA 60.179 55.000 3.36 0.00 0.00 2.10
56 57 1.447314 GGCCGAATCGACCGTTTCT 60.447 57.895 3.36 0.00 0.00 2.52
57 58 2.795389 CGGCCGAATCGACCGTTTC 61.795 63.158 24.07 3.82 46.83 2.78
58 59 2.812178 CGGCCGAATCGACCGTTT 60.812 61.111 24.07 0.00 46.83 3.60
62 63 0.179129 TAGAAACGGCCGAATCGACC 60.179 55.000 35.90 12.83 0.00 4.79
63 64 1.785430 GATAGAAACGGCCGAATCGAC 59.215 52.381 35.90 19.18 0.00 4.20
64 65 1.406180 TGATAGAAACGGCCGAATCGA 59.594 47.619 35.90 24.10 0.00 3.59
65 66 1.787155 CTGATAGAAACGGCCGAATCG 59.213 52.381 35.90 16.13 0.00 3.34
66 67 2.135933 CCTGATAGAAACGGCCGAATC 58.864 52.381 35.90 27.36 0.00 2.52
67 68 1.810412 GCCTGATAGAAACGGCCGAAT 60.810 52.381 35.90 20.47 36.56 3.34
68 69 0.461339 GCCTGATAGAAACGGCCGAA 60.461 55.000 35.90 11.82 36.56 4.30
69 70 1.143183 GCCTGATAGAAACGGCCGA 59.857 57.895 35.90 9.64 36.56 5.54
70 71 3.719214 GCCTGATAGAAACGGCCG 58.281 61.111 26.86 26.86 36.56 6.13
72 73 0.815615 CCTGGCCTGATAGAAACGGC 60.816 60.000 11.88 0.00 41.75 5.68
73 74 0.815615 GCCTGGCCTGATAGAAACGG 60.816 60.000 11.88 0.00 0.00 4.44
74 75 0.179000 AGCCTGGCCTGATAGAAACG 59.821 55.000 16.57 0.00 0.00 3.60
75 76 3.471680 CTTAGCCTGGCCTGATAGAAAC 58.528 50.000 16.57 0.00 0.00 2.78
76 77 2.439507 CCTTAGCCTGGCCTGATAGAAA 59.560 50.000 16.57 0.00 0.00 2.52
77 78 2.050144 CCTTAGCCTGGCCTGATAGAA 58.950 52.381 16.57 0.00 0.00 2.10
78 79 1.220493 TCCTTAGCCTGGCCTGATAGA 59.780 52.381 16.57 2.22 0.00 1.98
79 80 1.622811 CTCCTTAGCCTGGCCTGATAG 59.377 57.143 16.57 4.28 0.00 2.08
80 81 1.062121 ACTCCTTAGCCTGGCCTGATA 60.062 52.381 16.57 0.00 0.00 2.15
81 82 0.327000 ACTCCTTAGCCTGGCCTGAT 60.327 55.000 16.57 0.00 0.00 2.90
82 83 0.338467 TACTCCTTAGCCTGGCCTGA 59.662 55.000 16.57 5.98 0.00 3.86
83 84 0.466124 GTACTCCTTAGCCTGGCCTG 59.534 60.000 16.57 2.54 0.00 4.85
84 85 0.340208 AGTACTCCTTAGCCTGGCCT 59.660 55.000 16.57 5.44 0.00 5.19
85 86 1.205055 AAGTACTCCTTAGCCTGGCC 58.795 55.000 16.57 0.00 0.00 5.36
86 87 4.081031 ACTTAAAGTACTCCTTAGCCTGGC 60.081 45.833 11.65 11.65 31.48 4.85
87 88 5.678955 ACTTAAAGTACTCCTTAGCCTGG 57.321 43.478 0.00 0.00 31.48 4.45
88 89 6.107343 GGAACTTAAAGTACTCCTTAGCCTG 58.893 44.000 0.00 0.00 31.48 4.85
89 90 5.105432 CGGAACTTAAAGTACTCCTTAGCCT 60.105 44.000 0.00 0.00 31.48 4.58
90 91 5.107824 CGGAACTTAAAGTACTCCTTAGCC 58.892 45.833 0.00 0.00 31.48 3.93
91 92 5.718146 ACGGAACTTAAAGTACTCCTTAGC 58.282 41.667 0.00 0.00 31.48 3.09
92 93 8.049655 AGTACGGAACTTAAAGTACTCCTTAG 57.950 38.462 0.00 0.00 44.27 2.18
93 94 9.686683 ATAGTACGGAACTTAAAGTACTCCTTA 57.313 33.333 9.93 0.00 44.27 2.69
94 95 6.907853 AGTACGGAACTTAAAGTACTCCTT 57.092 37.500 0.00 0.00 44.27 3.36
95 96 7.416101 GCATAGTACGGAACTTAAAGTACTCCT 60.416 40.741 9.93 0.00 44.27 3.69
96 97 6.694844 GCATAGTACGGAACTTAAAGTACTCC 59.305 42.308 9.93 1.35 44.27 3.85
97 98 7.253422 TGCATAGTACGGAACTTAAAGTACTC 58.747 38.462 9.93 0.00 44.27 2.59
99 100 7.756722 TCTTGCATAGTACGGAACTTAAAGTAC 59.243 37.037 0.00 0.00 39.80 2.73
100 101 7.829725 TCTTGCATAGTACGGAACTTAAAGTA 58.170 34.615 0.00 0.00 39.80 2.24
101 102 6.694447 TCTTGCATAGTACGGAACTTAAAGT 58.306 36.000 0.00 0.00 39.80 2.66
102 103 7.591006 TTCTTGCATAGTACGGAACTTAAAG 57.409 36.000 0.00 0.00 39.80 1.85
103 104 8.556213 AATTCTTGCATAGTACGGAACTTAAA 57.444 30.769 0.00 0.00 39.80 1.52
104 105 8.447833 CAAATTCTTGCATAGTACGGAACTTAA 58.552 33.333 0.00 0.00 39.80 1.85
105 106 7.820386 TCAAATTCTTGCATAGTACGGAACTTA 59.180 33.333 0.00 0.00 34.60 2.24
106 107 6.653320 TCAAATTCTTGCATAGTACGGAACTT 59.347 34.615 0.00 0.00 34.60 2.66
107 108 6.170506 TCAAATTCTTGCATAGTACGGAACT 58.829 36.000 0.00 0.00 35.96 3.01
108 109 6.417191 TCAAATTCTTGCATAGTACGGAAC 57.583 37.500 0.00 0.00 32.14 3.62
109 110 6.458206 GCATCAAATTCTTGCATAGTACGGAA 60.458 38.462 0.00 0.00 36.40 4.30
110 111 5.007626 GCATCAAATTCTTGCATAGTACGGA 59.992 40.000 0.00 0.00 36.40 4.69
111 112 5.207768 GCATCAAATTCTTGCATAGTACGG 58.792 41.667 0.00 0.00 36.40 4.02
112 113 5.809464 TGCATCAAATTCTTGCATAGTACG 58.191 37.500 5.97 0.00 41.18 3.67
113 114 5.684626 GCTGCATCAAATTCTTGCATAGTAC 59.315 40.000 9.50 0.00 44.65 2.73
114 115 5.221106 GGCTGCATCAAATTCTTGCATAGTA 60.221 40.000 0.50 0.00 44.65 1.82
115 116 4.441079 GGCTGCATCAAATTCTTGCATAGT 60.441 41.667 0.50 0.00 44.65 2.12
116 117 4.049186 GGCTGCATCAAATTCTTGCATAG 58.951 43.478 0.50 2.70 44.65 2.23
117 118 3.181473 GGGCTGCATCAAATTCTTGCATA 60.181 43.478 0.50 0.00 44.65 3.14
118 119 2.419574 GGGCTGCATCAAATTCTTGCAT 60.420 45.455 0.50 0.00 44.65 3.96
119 120 1.066716 GGGCTGCATCAAATTCTTGCA 60.067 47.619 0.50 8.91 43.63 4.08
120 121 1.066716 TGGGCTGCATCAAATTCTTGC 60.067 47.619 0.50 1.43 36.91 4.01
121 122 2.232941 ACTGGGCTGCATCAAATTCTTG 59.767 45.455 0.50 0.00 0.00 3.02
122 123 2.494870 GACTGGGCTGCATCAAATTCTT 59.505 45.455 0.50 0.00 0.00 2.52
123 124 2.097825 GACTGGGCTGCATCAAATTCT 58.902 47.619 0.50 0.00 0.00 2.40
124 125 1.820519 TGACTGGGCTGCATCAAATTC 59.179 47.619 0.50 0.00 0.00 2.17
125 126 1.927487 TGACTGGGCTGCATCAAATT 58.073 45.000 0.50 0.00 0.00 1.82
126 127 2.154567 ATGACTGGGCTGCATCAAAT 57.845 45.000 0.50 0.00 0.00 2.32
127 128 2.368439 GTATGACTGGGCTGCATCAAA 58.632 47.619 0.50 0.00 0.00 2.69
128 129 1.408683 GGTATGACTGGGCTGCATCAA 60.409 52.381 0.50 0.00 0.00 2.57
129 130 0.181114 GGTATGACTGGGCTGCATCA 59.819 55.000 0.50 0.00 0.00 3.07
130 131 0.471617 AGGTATGACTGGGCTGCATC 59.528 55.000 0.50 0.00 0.00 3.91
131 132 0.182061 CAGGTATGACTGGGCTGCAT 59.818 55.000 0.50 0.00 34.84 3.96
132 133 1.603842 CAGGTATGACTGGGCTGCA 59.396 57.895 0.50 0.00 34.84 4.41
133 134 4.547859 CAGGTATGACTGGGCTGC 57.452 61.111 0.00 0.00 34.84 5.25
139 140 0.179009 CCCATGGCCAGGTATGACTG 60.179 60.000 17.55 4.03 38.21 3.51
140 141 1.999634 GCCCATGGCCAGGTATGACT 62.000 60.000 17.55 0.00 44.06 3.41
141 142 1.529244 GCCCATGGCCAGGTATGAC 60.529 63.158 17.55 0.00 44.06 3.06
142 143 2.926250 GCCCATGGCCAGGTATGA 59.074 61.111 17.55 0.00 44.06 2.15
194 195 1.180029 CCTCAGTTTTCTGCCATGGG 58.820 55.000 15.13 0.00 46.59 4.00
195 196 0.529378 GCCTCAGTTTTCTGCCATGG 59.471 55.000 7.63 7.63 46.59 3.66
196 197 0.529378 GGCCTCAGTTTTCTGCCATG 59.471 55.000 0.00 0.00 46.59 3.66
197 198 0.613012 GGGCCTCAGTTTTCTGCCAT 60.613 55.000 0.84 0.00 46.59 4.40
198 199 1.228552 GGGCCTCAGTTTTCTGCCA 60.229 57.895 0.84 0.00 46.59 4.92
199 200 1.228552 TGGGCCTCAGTTTTCTGCC 60.229 57.895 4.53 0.00 46.59 4.85
200 201 1.246737 CCTGGGCCTCAGTTTTCTGC 61.247 60.000 16.96 0.00 46.59 4.26
201 202 1.246737 GCCTGGGCCTCAGTTTTCTG 61.247 60.000 16.96 5.05 41.83 3.02
202 203 1.075659 GCCTGGGCCTCAGTTTTCT 59.924 57.895 16.96 0.00 41.83 2.52
203 204 3.686760 GCCTGGGCCTCAGTTTTC 58.313 61.111 16.96 3.57 41.83 2.29
220 221 3.739080 ATGGTAGGGCCTGGGAGGG 62.739 68.421 18.53 0.00 35.37 4.30
221 222 2.039405 ATGGTAGGGCCTGGGAGG 60.039 66.667 18.53 0.00 38.80 4.30
222 223 2.511452 CGATGGTAGGGCCTGGGAG 61.511 68.421 18.53 0.00 38.35 4.30
223 224 2.445845 CGATGGTAGGGCCTGGGA 60.446 66.667 18.53 0.00 38.35 4.37
224 225 3.560251 CCGATGGTAGGGCCTGGG 61.560 72.222 18.53 3.75 38.35 4.45
225 226 3.560251 CCCGATGGTAGGGCCTGG 61.560 72.222 18.53 7.41 42.77 4.45
231 232 1.129058 AAAGTAGGCCCGATGGTAGG 58.871 55.000 0.00 0.00 0.00 3.18
232 233 2.169769 TGAAAAGTAGGCCCGATGGTAG 59.830 50.000 0.00 0.00 0.00 3.18
233 234 2.189676 TGAAAAGTAGGCCCGATGGTA 58.810 47.619 0.00 0.00 0.00 3.25
234 235 0.988832 TGAAAAGTAGGCCCGATGGT 59.011 50.000 0.00 0.00 0.00 3.55
235 236 2.017049 CTTGAAAAGTAGGCCCGATGG 58.983 52.381 0.00 0.00 39.70 3.51
248 249 1.460273 GCCGGGCTTGGACTTGAAAA 61.460 55.000 12.87 0.00 0.00 2.29
249 250 1.901464 GCCGGGCTTGGACTTGAAA 60.901 57.895 12.87 0.00 0.00 2.69
250 251 2.282180 GCCGGGCTTGGACTTGAA 60.282 61.111 12.87 0.00 0.00 2.69
251 252 4.344865 GGCCGGGCTTGGACTTGA 62.345 66.667 22.87 0.00 32.64 3.02
258 259 2.055689 TATCAGATGGGCCGGGCTTG 62.056 60.000 28.80 19.61 0.00 4.01
259 260 1.352622 TTATCAGATGGGCCGGGCTT 61.353 55.000 28.80 15.95 0.00 4.35
260 261 1.352622 TTTATCAGATGGGCCGGGCT 61.353 55.000 28.80 9.11 0.00 5.19
261 262 0.467290 TTTTATCAGATGGGCCGGGC 60.467 55.000 22.00 22.00 0.00 6.13
262 263 1.956477 CTTTTTATCAGATGGGCCGGG 59.044 52.381 2.18 0.00 0.00 5.73
263 264 1.338020 GCTTTTTATCAGATGGGCCGG 59.662 52.381 0.00 0.00 0.00 6.13
264 265 1.338020 GGCTTTTTATCAGATGGGCCG 59.662 52.381 0.00 0.00 0.00 6.13
265 266 1.688735 GGGCTTTTTATCAGATGGGCC 59.311 52.381 0.00 0.00 37.82 5.80
266 267 2.363359 CAGGGCTTTTTATCAGATGGGC 59.637 50.000 0.00 0.00 0.00 5.36
267 268 3.902218 TCAGGGCTTTTTATCAGATGGG 58.098 45.455 0.00 0.00 0.00 4.00
268 269 5.920193 TTTCAGGGCTTTTTATCAGATGG 57.080 39.130 0.00 0.00 0.00 3.51
269 270 5.809051 GCTTTTCAGGGCTTTTTATCAGATG 59.191 40.000 0.00 0.00 0.00 2.90
270 271 5.105187 GGCTTTTCAGGGCTTTTTATCAGAT 60.105 40.000 0.00 0.00 0.00 2.90
271 272 4.220602 GGCTTTTCAGGGCTTTTTATCAGA 59.779 41.667 0.00 0.00 0.00 3.27
272 273 4.498241 GGCTTTTCAGGGCTTTTTATCAG 58.502 43.478 0.00 0.00 0.00 2.90
273 274 3.260632 GGGCTTTTCAGGGCTTTTTATCA 59.739 43.478 0.00 0.00 0.00 2.15
274 275 3.515502 AGGGCTTTTCAGGGCTTTTTATC 59.484 43.478 0.00 0.00 0.00 1.75
275 276 3.520696 AGGGCTTTTCAGGGCTTTTTAT 58.479 40.909 0.00 0.00 0.00 1.40
276 277 2.970987 AGGGCTTTTCAGGGCTTTTTA 58.029 42.857 0.00 0.00 0.00 1.52
277 278 1.806496 AGGGCTTTTCAGGGCTTTTT 58.194 45.000 0.00 0.00 0.00 1.94
278 279 1.806496 AAGGGCTTTTCAGGGCTTTT 58.194 45.000 0.00 0.00 0.00 2.27
279 280 2.529632 CTAAGGGCTTTTCAGGGCTTT 58.470 47.619 0.00 0.00 33.62 3.51
280 281 1.272704 CCTAAGGGCTTTTCAGGGCTT 60.273 52.381 0.00 0.00 0.00 4.35
281 282 0.332972 CCTAAGGGCTTTTCAGGGCT 59.667 55.000 0.00 0.00 0.00 5.19
282 283 0.684479 CCCTAAGGGCTTTTCAGGGC 60.684 60.000 4.44 0.00 39.62 5.19
283 284 3.596362 CCCTAAGGGCTTTTCAGGG 57.404 57.895 3.08 3.08 40.10 4.45
315 316 5.182190 GCATTTTATAAGGAAGAGGCCTAGC 59.818 44.000 4.42 0.00 37.26 3.42
316 317 5.707764 GGCATTTTATAAGGAAGAGGCCTAG 59.292 44.000 4.42 0.00 37.26 3.02
317 318 5.133660 TGGCATTTTATAAGGAAGAGGCCTA 59.866 40.000 4.42 0.00 37.26 3.93
318 319 4.079212 TGGCATTTTATAAGGAAGAGGCCT 60.079 41.667 3.86 3.86 40.93 5.19
319 320 4.215109 TGGCATTTTATAAGGAAGAGGCC 58.785 43.478 0.00 0.00 38.16 5.19
320 321 5.852282 TTGGCATTTTATAAGGAAGAGGC 57.148 39.130 0.00 0.00 0.00 4.70
326 327 8.802267 GCTTGGTATATTGGCATTTTATAAGGA 58.198 33.333 0.00 0.00 0.00 3.36
327 328 8.034804 GGCTTGGTATATTGGCATTTTATAAGG 58.965 37.037 0.00 0.00 0.00 2.69
328 329 8.034804 GGGCTTGGTATATTGGCATTTTATAAG 58.965 37.037 0.00 0.00 0.00 1.73
329 330 7.510685 TGGGCTTGGTATATTGGCATTTTATAA 59.489 33.333 0.00 0.00 0.00 0.98
330 331 7.013220 TGGGCTTGGTATATTGGCATTTTATA 58.987 34.615 0.00 0.00 0.00 0.98
331 332 5.843421 TGGGCTTGGTATATTGGCATTTTAT 59.157 36.000 0.00 0.00 0.00 1.40
332 333 5.211973 TGGGCTTGGTATATTGGCATTTTA 58.788 37.500 0.00 0.00 0.00 1.52
333 334 4.036518 TGGGCTTGGTATATTGGCATTTT 58.963 39.130 0.00 0.00 0.00 1.82
334 335 3.652055 TGGGCTTGGTATATTGGCATTT 58.348 40.909 0.00 0.00 0.00 2.32
335 336 3.326946 TGGGCTTGGTATATTGGCATT 57.673 42.857 0.00 0.00 0.00 3.56
336 337 3.233507 CTTGGGCTTGGTATATTGGCAT 58.766 45.455 0.00 0.00 0.00 4.40
337 338 2.665165 CTTGGGCTTGGTATATTGGCA 58.335 47.619 0.00 0.00 0.00 4.92
338 339 1.341209 GCTTGGGCTTGGTATATTGGC 59.659 52.381 0.00 0.00 35.22 4.52
339 340 1.963515 GGCTTGGGCTTGGTATATTGG 59.036 52.381 0.00 0.00 38.73 3.16
340 341 1.963515 GGGCTTGGGCTTGGTATATTG 59.036 52.381 0.00 0.00 38.73 1.90
341 342 1.478654 CGGGCTTGGGCTTGGTATATT 60.479 52.381 0.00 0.00 38.73 1.28
342 343 0.110486 CGGGCTTGGGCTTGGTATAT 59.890 55.000 0.00 0.00 38.73 0.86
343 344 1.276140 ACGGGCTTGGGCTTGGTATA 61.276 55.000 0.00 0.00 38.73 1.47
344 345 2.275418 CGGGCTTGGGCTTGGTAT 59.725 61.111 0.00 0.00 38.73 2.73
345 346 3.253838 ACGGGCTTGGGCTTGGTA 61.254 61.111 0.00 0.00 38.73 3.25
346 347 4.660938 GACGGGCTTGGGCTTGGT 62.661 66.667 0.00 0.00 38.73 3.67
348 349 4.659172 TGGACGGGCTTGGGCTTG 62.659 66.667 0.00 0.00 38.73 4.01
349 350 4.351054 CTGGACGGGCTTGGGCTT 62.351 66.667 0.00 0.00 38.73 4.35
369 370 1.531365 TTTTGAGCCCACCAGCAGG 60.531 57.895 0.00 0.00 42.21 4.85
370 371 0.825010 AGTTTTGAGCCCACCAGCAG 60.825 55.000 0.00 0.00 34.23 4.24
371 372 0.823356 GAGTTTTGAGCCCACCAGCA 60.823 55.000 0.00 0.00 34.23 4.41
372 373 0.823356 TGAGTTTTGAGCCCACCAGC 60.823 55.000 0.00 0.00 0.00 4.85
373 374 1.242076 CTGAGTTTTGAGCCCACCAG 58.758 55.000 0.00 0.00 0.00 4.00
374 375 0.178992 CCTGAGTTTTGAGCCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
375 376 1.527433 GCCTGAGTTTTGAGCCCACC 61.527 60.000 0.00 0.00 0.00 4.61
376 377 1.527433 GGCCTGAGTTTTGAGCCCAC 61.527 60.000 0.00 0.00 37.66 4.61
377 378 1.228552 GGCCTGAGTTTTGAGCCCA 60.229 57.895 0.00 0.00 37.66 5.36
378 379 3.686760 GGCCTGAGTTTTGAGCCC 58.313 61.111 0.00 0.00 37.66 5.19
379 380 0.827507 TTGGGCCTGAGTTTTGAGCC 60.828 55.000 4.53 0.00 43.09 4.70
380 381 0.600057 CTTGGGCCTGAGTTTTGAGC 59.400 55.000 4.53 0.00 0.00 4.26
381 382 0.600057 GCTTGGGCCTGAGTTTTGAG 59.400 55.000 4.53 0.00 0.00 3.02
382 383 2.732289 GCTTGGGCCTGAGTTTTGA 58.268 52.632 4.53 0.00 0.00 2.69
425 426 1.202940 CCTAAAATCCAGGGCCTAGGC 60.203 57.143 26.55 26.55 41.06 3.93
426 427 1.425448 CCCTAAAATCCAGGGCCTAGG 59.575 57.143 5.28 10.90 46.27 3.02
427 428 2.959465 CCCTAAAATCCAGGGCCTAG 57.041 55.000 5.28 0.00 46.27 3.02
433 434 1.152756 CCCGGCCCTAAAATCCAGG 60.153 63.158 0.00 0.00 0.00 4.45
434 435 1.828224 GCCCGGCCCTAAAATCCAG 60.828 63.158 0.00 0.00 0.00 3.86
435 436 2.277404 GCCCGGCCCTAAAATCCA 59.723 61.111 0.00 0.00 0.00 3.41
436 437 2.520982 GGCCCGGCCCTAAAATCC 60.521 66.667 18.83 0.00 44.06 3.01
476 477 1.048724 TTAGTCCTGGCCATCTCCGG 61.049 60.000 5.51 3.08 0.00 5.14
477 478 0.390860 CTTAGTCCTGGCCATCTCCG 59.609 60.000 5.51 0.00 0.00 4.63
478 479 0.107643 GCTTAGTCCTGGCCATCTCC 59.892 60.000 5.51 0.00 0.00 3.71
479 480 0.107643 GGCTTAGTCCTGGCCATCTC 59.892 60.000 5.51 0.00 44.69 2.75
480 481 1.348775 GGGCTTAGTCCTGGCCATCT 61.349 60.000 5.51 8.22 46.87 2.90
481 482 1.149401 GGGCTTAGTCCTGGCCATC 59.851 63.158 5.51 0.00 46.87 3.51
482 483 3.335711 GGGCTTAGTCCTGGCCAT 58.664 61.111 5.51 0.00 46.87 4.40
485 486 1.424638 TATCTGGGCTTAGTCCTGGC 58.575 55.000 9.81 0.00 0.00 4.85
486 487 2.104963 GGTTATCTGGGCTTAGTCCTGG 59.895 54.545 9.81 0.31 0.00 4.45
487 488 2.771943 TGGTTATCTGGGCTTAGTCCTG 59.228 50.000 3.93 3.54 0.00 3.86
488 489 3.130734 TGGTTATCTGGGCTTAGTCCT 57.869 47.619 3.93 0.00 0.00 3.85
489 490 3.926058 TTGGTTATCTGGGCTTAGTCC 57.074 47.619 0.00 0.00 0.00 3.85
490 491 5.998363 CCTATTTGGTTATCTGGGCTTAGTC 59.002 44.000 0.00 0.00 0.00 2.59
491 492 5.670361 TCCTATTTGGTTATCTGGGCTTAGT 59.330 40.000 0.00 0.00 37.07 2.24
492 493 5.998363 GTCCTATTTGGTTATCTGGGCTTAG 59.002 44.000 0.00 0.00 37.07 2.18
493 494 5.430417 TGTCCTATTTGGTTATCTGGGCTTA 59.570 40.000 0.00 0.00 37.07 3.09
494 495 4.229582 TGTCCTATTTGGTTATCTGGGCTT 59.770 41.667 0.00 0.00 37.07 4.35
495 496 3.785887 TGTCCTATTTGGTTATCTGGGCT 59.214 43.478 0.00 0.00 37.07 5.19
496 497 3.883489 GTGTCCTATTTGGTTATCTGGGC 59.117 47.826 0.00 0.00 37.07 5.36
497 498 5.373812 AGTGTCCTATTTGGTTATCTGGG 57.626 43.478 0.00 0.00 37.07 4.45
498 499 8.980481 ATAAAGTGTCCTATTTGGTTATCTGG 57.020 34.615 0.00 0.00 37.07 3.86
500 501 9.628500 GGAATAAAGTGTCCTATTTGGTTATCT 57.372 33.333 0.00 0.00 37.07 1.98
501 502 8.847196 GGGAATAAAGTGTCCTATTTGGTTATC 58.153 37.037 0.00 0.00 37.07 1.75
502 503 7.501225 CGGGAATAAAGTGTCCTATTTGGTTAT 59.499 37.037 0.00 0.00 37.07 1.89
503 504 6.824704 CGGGAATAAAGTGTCCTATTTGGTTA 59.175 38.462 0.00 0.00 37.07 2.85
504 505 5.650703 CGGGAATAAAGTGTCCTATTTGGTT 59.349 40.000 0.00 0.00 37.07 3.67
505 506 5.190677 CGGGAATAAAGTGTCCTATTTGGT 58.809 41.667 0.00 0.00 37.07 3.67
506 507 5.190677 ACGGGAATAAAGTGTCCTATTTGG 58.809 41.667 0.00 0.00 34.10 3.28
507 508 6.019318 CGTACGGGAATAAAGTGTCCTATTTG 60.019 42.308 7.57 0.00 34.10 2.32
508 509 6.044682 CGTACGGGAATAAAGTGTCCTATTT 58.955 40.000 7.57 0.00 34.10 1.40
509 510 5.360714 TCGTACGGGAATAAAGTGTCCTATT 59.639 40.000 16.52 0.00 34.10 1.73
510 511 4.889409 TCGTACGGGAATAAAGTGTCCTAT 59.111 41.667 16.52 0.00 34.10 2.57
511 512 4.269183 TCGTACGGGAATAAAGTGTCCTA 58.731 43.478 16.52 0.00 34.10 2.94
512 513 3.091545 TCGTACGGGAATAAAGTGTCCT 58.908 45.455 16.52 0.00 34.10 3.85
513 514 3.442100 CTCGTACGGGAATAAAGTGTCC 58.558 50.000 10.34 0.00 0.00 4.02
514 515 2.856557 GCTCGTACGGGAATAAAGTGTC 59.143 50.000 21.77 0.00 0.00 3.67
515 516 2.417787 GGCTCGTACGGGAATAAAGTGT 60.418 50.000 21.77 0.00 0.00 3.55
516 517 2.159142 AGGCTCGTACGGGAATAAAGTG 60.159 50.000 21.77 0.00 0.00 3.16
517 518 2.105766 AGGCTCGTACGGGAATAAAGT 58.894 47.619 21.77 0.00 0.00 2.66
518 519 2.884894 AGGCTCGTACGGGAATAAAG 57.115 50.000 21.77 6.41 0.00 1.85
519 520 3.290710 ACTAGGCTCGTACGGGAATAAA 58.709 45.455 21.77 0.00 0.00 1.40
520 521 2.936202 ACTAGGCTCGTACGGGAATAA 58.064 47.619 21.77 0.00 0.00 1.40
521 522 2.645838 ACTAGGCTCGTACGGGAATA 57.354 50.000 21.77 9.43 0.00 1.75
522 523 1.772836 AACTAGGCTCGTACGGGAAT 58.227 50.000 21.77 8.66 0.00 3.01
523 524 2.418368 TAACTAGGCTCGTACGGGAA 57.582 50.000 21.77 1.85 0.00 3.97
524 525 2.645838 ATAACTAGGCTCGTACGGGA 57.354 50.000 21.77 0.00 0.00 5.14
525 526 3.190118 CCTAATAACTAGGCTCGTACGGG 59.810 52.174 16.52 14.27 41.02 5.28
526 527 3.190118 CCCTAATAACTAGGCTCGTACGG 59.810 52.174 16.52 7.41 45.51 4.02
527 528 3.365767 GCCCTAATAACTAGGCTCGTACG 60.366 52.174 9.53 9.53 45.51 3.67
528 529 3.365767 CGCCCTAATAACTAGGCTCGTAC 60.366 52.174 0.00 0.00 45.51 3.67
529 530 2.816087 CGCCCTAATAACTAGGCTCGTA 59.184 50.000 0.00 0.00 45.51 3.43
530 531 1.612463 CGCCCTAATAACTAGGCTCGT 59.388 52.381 0.00 0.00 45.51 4.18
531 532 1.067776 CCGCCCTAATAACTAGGCTCG 60.068 57.143 0.00 0.00 45.51 5.03
532 533 2.245582 TCCGCCCTAATAACTAGGCTC 58.754 52.381 0.00 0.00 45.51 4.70
533 534 2.393630 TCCGCCCTAATAACTAGGCT 57.606 50.000 0.00 0.00 45.51 4.58
534 535 2.935676 GCATCCGCCCTAATAACTAGGC 60.936 54.545 0.00 0.00 45.51 3.93
535 536 2.674177 CGCATCCGCCCTAATAACTAGG 60.674 54.545 0.00 0.00 46.33 3.02
536 537 2.607187 CGCATCCGCCCTAATAACTAG 58.393 52.381 0.00 0.00 33.11 2.57
537 538 1.274167 CCGCATCCGCCCTAATAACTA 59.726 52.381 0.00 0.00 33.11 2.24
538 539 0.034896 CCGCATCCGCCCTAATAACT 59.965 55.000 0.00 0.00 33.11 2.24
539 540 0.953960 CCCGCATCCGCCCTAATAAC 60.954 60.000 0.00 0.00 33.11 1.89
540 541 1.373435 CCCGCATCCGCCCTAATAA 59.627 57.895 0.00 0.00 33.11 1.40
541 542 3.065306 CCCGCATCCGCCCTAATA 58.935 61.111 0.00 0.00 33.11 0.98
542 543 4.643387 GCCCGCATCCGCCCTAAT 62.643 66.667 0.00 0.00 33.11 1.73
544 545 4.926162 TAGCCCGCATCCGCCCTA 62.926 66.667 0.00 0.00 33.11 3.53
548 549 3.733344 TTCAGTAGCCCGCATCCGC 62.733 63.158 0.00 0.00 0.00 5.54
549 550 1.883084 GTTCAGTAGCCCGCATCCG 60.883 63.158 0.00 0.00 0.00 4.18
550 551 1.090052 GTGTTCAGTAGCCCGCATCC 61.090 60.000 0.00 0.00 0.00 3.51
551 552 0.391130 TGTGTTCAGTAGCCCGCATC 60.391 55.000 0.00 0.00 0.00 3.91
552 553 0.253044 ATGTGTTCAGTAGCCCGCAT 59.747 50.000 0.00 0.00 0.00 4.73
553 554 0.391130 GATGTGTTCAGTAGCCCGCA 60.391 55.000 0.00 0.00 0.00 5.69
554 555 1.090052 GGATGTGTTCAGTAGCCCGC 61.090 60.000 0.00 0.00 0.00 6.13
555 556 0.249120 TGGATGTGTTCAGTAGCCCG 59.751 55.000 0.00 0.00 0.00 6.13
556 557 2.717639 ATGGATGTGTTCAGTAGCCC 57.282 50.000 0.00 0.00 0.00 5.19
557 558 5.237344 GTCAATATGGATGTGTTCAGTAGCC 59.763 44.000 0.00 0.00 0.00 3.93
558 559 5.237344 GGTCAATATGGATGTGTTCAGTAGC 59.763 44.000 0.00 0.00 0.00 3.58
559 560 6.348498 TGGTCAATATGGATGTGTTCAGTAG 58.652 40.000 0.00 0.00 0.00 2.57
560 561 6.306643 TGGTCAATATGGATGTGTTCAGTA 57.693 37.500 0.00 0.00 0.00 2.74
561 562 5.178096 TGGTCAATATGGATGTGTTCAGT 57.822 39.130 0.00 0.00 0.00 3.41
562 563 5.449588 GCTTGGTCAATATGGATGTGTTCAG 60.450 44.000 0.00 0.00 0.00 3.02
563 564 4.398988 GCTTGGTCAATATGGATGTGTTCA 59.601 41.667 0.00 0.00 0.00 3.18
564 565 4.398988 TGCTTGGTCAATATGGATGTGTTC 59.601 41.667 0.00 0.00 0.00 3.18
565 566 4.158394 GTGCTTGGTCAATATGGATGTGTT 59.842 41.667 0.00 0.00 0.00 3.32
566 567 3.696051 GTGCTTGGTCAATATGGATGTGT 59.304 43.478 0.00 0.00 0.00 3.72
567 568 3.949754 AGTGCTTGGTCAATATGGATGTG 59.050 43.478 0.00 0.00 0.00 3.21
568 569 3.949754 CAGTGCTTGGTCAATATGGATGT 59.050 43.478 0.00 0.00 0.00 3.06
569 570 3.243301 GCAGTGCTTGGTCAATATGGATG 60.243 47.826 8.18 0.00 0.00 3.51
570 571 2.954318 GCAGTGCTTGGTCAATATGGAT 59.046 45.455 8.18 0.00 0.00 3.41
571 572 2.368439 GCAGTGCTTGGTCAATATGGA 58.632 47.619 8.18 0.00 0.00 3.41
572 573 1.406539 GGCAGTGCTTGGTCAATATGG 59.593 52.381 16.11 0.00 0.00 2.74
573 574 2.098607 CAGGCAGTGCTTGGTCAATATG 59.901 50.000 18.97 0.00 31.89 1.78
574 575 2.372264 CAGGCAGTGCTTGGTCAATAT 58.628 47.619 18.97 0.00 31.89 1.28
587 588 0.403271 AATCTTCAGTGGCAGGCAGT 59.597 50.000 0.00 0.00 0.00 4.40
592 593 4.843220 ACTTCAAAATCTTCAGTGGCAG 57.157 40.909 0.00 0.00 0.00 4.85
594 595 5.591099 TCAAACTTCAAAATCTTCAGTGGC 58.409 37.500 0.00 0.00 0.00 5.01
595 596 7.035004 TGTTCAAACTTCAAAATCTTCAGTGG 58.965 34.615 0.00 0.00 0.00 4.00
596 597 7.970061 TCTGTTCAAACTTCAAAATCTTCAGTG 59.030 33.333 0.00 0.00 0.00 3.66
597 598 8.055279 TCTGTTCAAACTTCAAAATCTTCAGT 57.945 30.769 0.00 0.00 0.00 3.41
599 600 8.184192 GTCTCTGTTCAAACTTCAAAATCTTCA 58.816 33.333 0.00 0.00 0.00 3.02
628 629 3.383601 GTTTGCCGAACGTTGCGC 61.384 61.111 5.00 7.44 0.00 6.09
638 647 1.073216 TTGTGTTTGCGTGTTTGCCG 61.073 50.000 0.00 0.00 0.00 5.69
642 651 1.980156 GTTCGTTGTGTTTGCGTGTTT 59.020 42.857 0.00 0.00 0.00 2.83
683 692 1.874019 GCGTCTGTGATGCGATCGT 60.874 57.895 17.81 0.00 34.82 3.73
684 693 2.916423 GCGTCTGTGATGCGATCG 59.084 61.111 11.69 11.69 34.82 3.69
689 698 3.857854 CTGCCGCGTCTGTGATGC 61.858 66.667 4.92 0.00 40.75 3.91
853 877 4.162690 CGGAGGGCAGGCAGGTAC 62.163 72.222 0.00 0.00 0.00 3.34
899 927 1.902765 CTTTTGATTGGGGGCTGGCC 61.903 60.000 12.58 12.58 0.00 5.36
977 1012 1.614241 CCCCGAGTCCTGGTCGATTT 61.614 60.000 8.15 0.00 39.92 2.17
984 1020 2.765807 ATGCTCCCCGAGTCCTGG 60.766 66.667 0.00 0.00 31.39 4.45
986 1022 2.765807 CCATGCTCCCCGAGTCCT 60.766 66.667 0.00 0.00 31.39 3.85
990 1026 4.598894 CTCGCCATGCTCCCCGAG 62.599 72.222 0.00 0.00 40.76 4.63
1090 1126 3.868757 GGTTCCTGACCCAAATTAAGC 57.131 47.619 0.00 0.00 43.06 3.09
1107 1143 2.818751 TGGTTGTTTGACTCTGGGTT 57.181 45.000 0.00 0.00 0.00 4.11
1109 1145 3.009033 TCCTATGGTTGTTTGACTCTGGG 59.991 47.826 0.00 0.00 0.00 4.45
1112 1148 4.263462 TGCATCCTATGGTTGTTTGACTCT 60.263 41.667 0.00 0.00 0.00 3.24
1113 1149 4.009675 TGCATCCTATGGTTGTTTGACTC 58.990 43.478 0.00 0.00 0.00 3.36
1114 1150 4.012374 CTGCATCCTATGGTTGTTTGACT 58.988 43.478 0.00 0.00 0.00 3.41
1115 1151 4.009675 TCTGCATCCTATGGTTGTTTGAC 58.990 43.478 0.00 0.00 0.00 3.18
1117 1155 4.380867 GGTTCTGCATCCTATGGTTGTTTG 60.381 45.833 0.00 0.00 0.00 2.93
1120 1158 2.578021 AGGTTCTGCATCCTATGGTTGT 59.422 45.455 3.84 0.00 31.66 3.32
1121 1159 3.287867 AGGTTCTGCATCCTATGGTTG 57.712 47.619 3.84 0.00 31.66 3.77
1126 1164 4.910304 ACCAATCTAGGTTCTGCATCCTAT 59.090 41.667 11.20 0.00 39.34 2.57
1133 1171 2.680339 GCAAGACCAATCTAGGTTCTGC 59.320 50.000 0.00 0.00 43.38 4.26
1134 1172 4.187694 GAGCAAGACCAATCTAGGTTCTG 58.812 47.826 0.00 0.00 43.38 3.02
1136 1174 3.190874 CGAGCAAGACCAATCTAGGTTC 58.809 50.000 0.00 0.00 43.38 3.62
1139 1177 1.757118 TCCGAGCAAGACCAATCTAGG 59.243 52.381 0.00 0.00 33.57 3.02
1142 1180 0.539051 CCTCCGAGCAAGACCAATCT 59.461 55.000 0.00 0.00 36.42 2.40
1144 1182 0.539051 CTCCTCCGAGCAAGACCAAT 59.461 55.000 0.00 0.00 0.00 3.16
1157 1195 2.007547 GCAAGAAGTTACGGCTCCTCC 61.008 57.143 0.00 0.00 0.00 4.30
1158 1196 1.360820 GCAAGAAGTTACGGCTCCTC 58.639 55.000 0.00 0.00 0.00 3.71
1159 1197 0.389948 CGCAAGAAGTTACGGCTCCT 60.390 55.000 0.00 0.00 43.02 3.69
1161 1199 2.079049 CCGCAAGAAGTTACGGCTC 58.921 57.895 0.00 0.00 39.08 4.70
1162 1200 4.278956 CCGCAAGAAGTTACGGCT 57.721 55.556 0.00 0.00 39.08 5.52
1166 1204 3.685836 ACAAACACCGCAAGAAGTTAC 57.314 42.857 0.00 0.00 43.02 2.50
1168 1206 2.230266 ACAACAAACACCGCAAGAAGTT 59.770 40.909 0.00 0.00 43.02 2.66
1169 1207 1.816224 ACAACAAACACCGCAAGAAGT 59.184 42.857 0.00 0.00 43.02 3.01
1176 1214 1.400494 ACTTCTGACAACAAACACCGC 59.600 47.619 0.00 0.00 0.00 5.68
1178 1216 3.689649 ACAGACTTCTGACAACAAACACC 59.310 43.478 13.27 0.00 46.59 4.16
1201 1239 4.833478 ATTGATCTTGCTGGACAGTAGT 57.167 40.909 0.82 0.00 0.00 2.73
1207 1245 5.633830 TTCTGAAATTGATCTTGCTGGAC 57.366 39.130 0.00 0.00 0.00 4.02
1208 1246 7.066645 CAGTATTCTGAAATTGATCTTGCTGGA 59.933 37.037 0.00 0.00 43.76 3.86
1211 1249 7.934855 ACAGTATTCTGAAATTGATCTTGCT 57.065 32.000 6.32 0.00 43.76 3.91
1212 1250 9.495754 GTAACAGTATTCTGAAATTGATCTTGC 57.504 33.333 6.32 0.00 43.76 4.01
1217 1259 7.606456 ACACCGTAACAGTATTCTGAAATTGAT 59.394 33.333 6.32 0.00 43.76 2.57
1225 1267 3.994392 AGCAACACCGTAACAGTATTCTG 59.006 43.478 0.00 0.00 46.18 3.02
1229 1271 2.614481 CCCAGCAACACCGTAACAGTAT 60.614 50.000 0.00 0.00 0.00 2.12
1235 1277 0.180642 TGAACCCAGCAACACCGTAA 59.819 50.000 0.00 0.00 0.00 3.18
1237 1279 1.525995 CTGAACCCAGCAACACCGT 60.526 57.895 0.00 0.00 33.07 4.83
1281 1337 8.984855 AGCCGCCCATAACTAATAACTATAATA 58.015 33.333 0.00 0.00 0.00 0.98
1282 1338 7.769044 CAGCCGCCCATAACTAATAACTATAAT 59.231 37.037 0.00 0.00 0.00 1.28
1283 1339 7.101054 CAGCCGCCCATAACTAATAACTATAA 58.899 38.462 0.00 0.00 0.00 0.98
1284 1340 6.636705 CAGCCGCCCATAACTAATAACTATA 58.363 40.000 0.00 0.00 0.00 1.31
1285 1341 5.488341 CAGCCGCCCATAACTAATAACTAT 58.512 41.667 0.00 0.00 0.00 2.12
1286 1342 4.801581 GCAGCCGCCCATAACTAATAACTA 60.802 45.833 0.00 0.00 0.00 2.24
1287 1343 3.740115 CAGCCGCCCATAACTAATAACT 58.260 45.455 0.00 0.00 0.00 2.24
1288 1344 2.225727 GCAGCCGCCCATAACTAATAAC 59.774 50.000 0.00 0.00 0.00 1.89
1289 1345 2.105821 AGCAGCCGCCCATAACTAATAA 59.894 45.455 0.00 0.00 39.83 1.40
1290 1346 1.697432 AGCAGCCGCCCATAACTAATA 59.303 47.619 0.00 0.00 39.83 0.98
1291 1347 0.474184 AGCAGCCGCCCATAACTAAT 59.526 50.000 0.00 0.00 39.83 1.73
1292 1348 0.463654 CAGCAGCCGCCCATAACTAA 60.464 55.000 0.00 0.00 39.83 2.24
1304 1360 3.086600 AGTCCCTAGCCAGCAGCC 61.087 66.667 0.00 0.00 45.47 4.85
1306 1362 1.267574 TTGGAGTCCCTAGCCAGCAG 61.268 60.000 6.74 0.00 32.47 4.24
1307 1363 0.840288 TTTGGAGTCCCTAGCCAGCA 60.840 55.000 6.74 0.00 32.47 4.41
1308 1364 0.548510 ATTTGGAGTCCCTAGCCAGC 59.451 55.000 6.74 0.00 32.47 4.85
1310 1366 3.414759 TCTATTTGGAGTCCCTAGCCA 57.585 47.619 6.74 0.00 0.00 4.75
1311 1367 4.348168 TCAATCTATTTGGAGTCCCTAGCC 59.652 45.833 6.74 0.00 35.92 3.93
1312 1368 5.552870 TCAATCTATTTGGAGTCCCTAGC 57.447 43.478 6.74 0.00 35.92 3.42
1313 1369 7.308450 TGATCAATCTATTTGGAGTCCCTAG 57.692 40.000 6.74 5.53 35.92 3.02
1314 1370 7.878621 ATGATCAATCTATTTGGAGTCCCTA 57.121 36.000 6.74 0.00 35.92 3.53
1316 1372 7.911651 TCTATGATCAATCTATTTGGAGTCCC 58.088 38.462 6.74 0.00 35.92 4.46
1318 1374 9.859427 CTCTCTATGATCAATCTATTTGGAGTC 57.141 37.037 0.00 0.00 35.92 3.36
1319 1375 9.599056 TCTCTCTATGATCAATCTATTTGGAGT 57.401 33.333 0.00 0.00 35.92 3.85
1321 1377 8.530311 GCTCTCTCTATGATCAATCTATTTGGA 58.470 37.037 0.00 0.00 35.92 3.53
1322 1378 7.488792 CGCTCTCTCTATGATCAATCTATTTGG 59.511 40.741 0.00 0.00 35.92 3.28
1323 1379 8.028354 ACGCTCTCTCTATGATCAATCTATTTG 58.972 37.037 0.00 0.00 36.61 2.32
1328 1398 4.321156 GCACGCTCTCTCTATGATCAATCT 60.321 45.833 0.00 0.00 0.00 2.40
1329 1399 3.919804 GCACGCTCTCTCTATGATCAATC 59.080 47.826 0.00 0.00 0.00 2.67
1331 1401 2.035193 GGCACGCTCTCTCTATGATCAA 59.965 50.000 0.00 0.00 0.00 2.57
1348 1418 0.316689 CACTTTGTCGAAACCGGCAC 60.317 55.000 0.00 0.00 41.74 5.01
1349 1419 0.462225 TCACTTTGTCGAAACCGGCA 60.462 50.000 0.00 0.00 40.17 5.69
1350 1420 0.658897 TTCACTTTGTCGAAACCGGC 59.341 50.000 0.00 0.00 0.00 6.13
1351 1421 1.937899 ACTTCACTTTGTCGAAACCGG 59.062 47.619 0.00 0.00 0.00 5.28
1352 1422 2.286184 CCACTTCACTTTGTCGAAACCG 60.286 50.000 0.00 0.00 0.00 4.44
1353 1423 2.940410 TCCACTTCACTTTGTCGAAACC 59.060 45.455 0.00 0.00 0.00 3.27
1354 1424 4.272504 TGATCCACTTCACTTTGTCGAAAC 59.727 41.667 0.00 0.00 0.00 2.78
1355 1425 4.447290 TGATCCACTTCACTTTGTCGAAA 58.553 39.130 0.00 0.00 0.00 3.46
1356 1426 4.066646 TGATCCACTTCACTTTGTCGAA 57.933 40.909 0.00 0.00 0.00 3.71
1357 1427 3.744238 TGATCCACTTCACTTTGTCGA 57.256 42.857 0.00 0.00 0.00 4.20
1358 1428 4.248859 AGATGATCCACTTCACTTTGTCG 58.751 43.478 0.00 0.00 0.00 4.35
1359 1429 7.044181 TGATAGATGATCCACTTCACTTTGTC 58.956 38.462 0.00 0.00 33.07 3.18
1360 1430 6.950842 TGATAGATGATCCACTTCACTTTGT 58.049 36.000 0.00 0.00 33.07 2.83
1361 1431 8.343366 CAATGATAGATGATCCACTTCACTTTG 58.657 37.037 0.00 0.00 33.07 2.77
1362 1432 7.501559 CCAATGATAGATGATCCACTTCACTTT 59.498 37.037 0.00 0.00 33.07 2.66
1363 1433 6.996879 CCAATGATAGATGATCCACTTCACTT 59.003 38.462 0.00 0.00 33.07 3.16
1364 1434 6.531923 CCAATGATAGATGATCCACTTCACT 58.468 40.000 0.00 0.00 33.07 3.41
1365 1435 5.180868 GCCAATGATAGATGATCCACTTCAC 59.819 44.000 0.00 0.00 33.07 3.18
1366 1436 5.311265 GCCAATGATAGATGATCCACTTCA 58.689 41.667 0.00 0.00 33.07 3.02
1367 1437 4.699257 GGCCAATGATAGATGATCCACTTC 59.301 45.833 0.00 0.00 33.07 3.01
1368 1438 4.508047 GGGCCAATGATAGATGATCCACTT 60.508 45.833 4.39 0.00 33.07 3.16
1369 1439 3.009916 GGGCCAATGATAGATGATCCACT 59.990 47.826 4.39 0.00 33.07 4.00
1370 1440 3.009916 AGGGCCAATGATAGATGATCCAC 59.990 47.826 6.18 0.00 33.07 4.02
1371 1441 3.262842 AGGGCCAATGATAGATGATCCA 58.737 45.455 6.18 0.00 33.07 3.41
1372 1442 3.522750 AGAGGGCCAATGATAGATGATCC 59.477 47.826 6.18 0.00 33.07 3.36
1373 1443 4.019501 ACAGAGGGCCAATGATAGATGATC 60.020 45.833 14.18 0.00 34.84 2.92
1374 1444 3.915073 ACAGAGGGCCAATGATAGATGAT 59.085 43.478 14.18 0.00 0.00 2.45
1375 1445 3.321039 ACAGAGGGCCAATGATAGATGA 58.679 45.455 14.18 0.00 0.00 2.92
1376 1446 3.784511 ACAGAGGGCCAATGATAGATG 57.215 47.619 14.18 0.00 0.00 2.90
1377 1447 4.414846 AGAAACAGAGGGCCAATGATAGAT 59.585 41.667 14.18 0.00 0.00 1.98
1378 1448 3.782523 AGAAACAGAGGGCCAATGATAGA 59.217 43.478 14.18 0.00 0.00 1.98
1379 1449 4.162040 AGAAACAGAGGGCCAATGATAG 57.838 45.455 14.18 0.00 0.00 2.08
1380 1450 4.526970 GAAGAAACAGAGGGCCAATGATA 58.473 43.478 14.18 0.00 0.00 2.15
1381 1451 3.359950 GAAGAAACAGAGGGCCAATGAT 58.640 45.455 14.18 0.15 0.00 2.45
1382 1452 2.555227 GGAAGAAACAGAGGGCCAATGA 60.555 50.000 14.18 0.00 0.00 2.57
1383 1453 1.821136 GGAAGAAACAGAGGGCCAATG 59.179 52.381 6.18 6.35 0.00 2.82
1384 1454 1.428912 TGGAAGAAACAGAGGGCCAAT 59.571 47.619 6.18 0.00 0.00 3.16
1413 1483 9.025041 TGTAATTCTAGTGTTTCTCAGAGATCA 57.975 33.333 0.00 1.46 0.00 2.92
1414 1484 9.296400 GTGTAATTCTAGTGTTTCTCAGAGATC 57.704 37.037 0.00 0.00 0.00 2.75
1424 1494 8.974060 TTTCCTCTTGTGTAATTCTAGTGTTT 57.026 30.769 0.00 0.00 0.00 2.83
1425 1495 9.003658 CATTTCCTCTTGTGTAATTCTAGTGTT 57.996 33.333 0.00 0.00 0.00 3.32
1426 1496 7.607991 CCATTTCCTCTTGTGTAATTCTAGTGT 59.392 37.037 0.00 0.00 0.00 3.55
1427 1497 7.824289 TCCATTTCCTCTTGTGTAATTCTAGTG 59.176 37.037 0.00 0.00 0.00 2.74
1430 1500 7.283127 GCATCCATTTCCTCTTGTGTAATTCTA 59.717 37.037 0.00 0.00 0.00 2.10
1431 1501 6.096001 GCATCCATTTCCTCTTGTGTAATTCT 59.904 38.462 0.00 0.00 0.00 2.40
1432 1502 6.127647 TGCATCCATTTCCTCTTGTGTAATTC 60.128 38.462 0.00 0.00 0.00 2.17
1433 1503 5.716228 TGCATCCATTTCCTCTTGTGTAATT 59.284 36.000 0.00 0.00 0.00 1.40
1434 1504 5.263599 TGCATCCATTTCCTCTTGTGTAAT 58.736 37.500 0.00 0.00 0.00 1.89
1435 1505 4.661222 TGCATCCATTTCCTCTTGTGTAA 58.339 39.130 0.00 0.00 0.00 2.41
1436 1506 4.299586 TGCATCCATTTCCTCTTGTGTA 57.700 40.909 0.00 0.00 0.00 2.90
1437 1507 3.159213 TGCATCCATTTCCTCTTGTGT 57.841 42.857 0.00 0.00 0.00 3.72
1441 1511 5.750352 AAACATTGCATCCATTTCCTCTT 57.250 34.783 0.00 0.00 0.00 2.85
1442 1512 5.484715 CAAAACATTGCATCCATTTCCTCT 58.515 37.500 0.00 0.00 0.00 3.69
1443 1513 4.632688 CCAAAACATTGCATCCATTTCCTC 59.367 41.667 0.00 0.00 0.00 3.71
1444 1514 4.566070 CCCAAAACATTGCATCCATTTCCT 60.566 41.667 0.00 0.00 0.00 3.36
1451 1665 1.270732 TGCACCCAAAACATTGCATCC 60.271 47.619 0.00 0.00 0.00 3.51
1452 1666 2.070783 CTGCACCCAAAACATTGCATC 58.929 47.619 0.00 0.00 0.00 3.91
1456 1670 6.857777 TTTTAATCTGCACCCAAAACATTG 57.142 33.333 0.00 0.00 0.00 2.82
1457 1671 7.718753 TCAATTTTAATCTGCACCCAAAACATT 59.281 29.630 0.00 0.00 0.00 2.71
1459 1673 6.481644 GTCAATTTTAATCTGCACCCAAAACA 59.518 34.615 0.00 0.00 0.00 2.83
1466 1680 6.855836 TCATCAGTCAATTTTAATCTGCACC 58.144 36.000 0.00 0.00 0.00 5.01
1476 1690 9.467258 CAATGTGTAACTTCATCAGTCAATTTT 57.533 29.630 0.00 0.00 38.04 1.82
1478 1692 8.394971 TCAATGTGTAACTTCATCAGTCAATT 57.605 30.769 0.00 0.00 38.04 2.32
1483 1697 8.939929 CAGTTATCAATGTGTAACTTCATCAGT 58.060 33.333 9.72 0.00 38.67 3.41
1493 1833 9.135843 CGTTTCTAGTCAGTTATCAATGTGTAA 57.864 33.333 0.00 0.00 0.00 2.41
1506 1846 8.870879 GTGCTTATTTATTCGTTTCTAGTCAGT 58.129 33.333 0.00 0.00 0.00 3.41
1513 1853 7.543172 TCGTACAGTGCTTATTTATTCGTTTCT 59.457 33.333 0.00 0.00 0.00 2.52
1516 1856 6.587226 TGTCGTACAGTGCTTATTTATTCGTT 59.413 34.615 0.00 0.00 0.00 3.85
1518 1858 6.563398 TGTCGTACAGTGCTTATTTATTCG 57.437 37.500 0.00 0.00 0.00 3.34
1529 1870 8.447787 AAAATTCAAATTATGTCGTACAGTGC 57.552 30.769 0.00 0.00 0.00 4.40
1551 1892 5.237779 CCTCTACGCCTTCACAAGTTTAAAA 59.762 40.000 0.00 0.00 0.00 1.52
1554 1895 3.306502 CCCTCTACGCCTTCACAAGTTTA 60.307 47.826 0.00 0.00 0.00 2.01
1555 1896 2.550208 CCCTCTACGCCTTCACAAGTTT 60.550 50.000 0.00 0.00 0.00 2.66
1556 1897 1.002087 CCCTCTACGCCTTCACAAGTT 59.998 52.381 0.00 0.00 0.00 2.66
1557 1898 0.608640 CCCTCTACGCCTTCACAAGT 59.391 55.000 0.00 0.00 0.00 3.16
1558 1899 0.895530 TCCCTCTACGCCTTCACAAG 59.104 55.000 0.00 0.00 0.00 3.16
1559 1900 1.001633 GTTCCCTCTACGCCTTCACAA 59.998 52.381 0.00 0.00 0.00 3.33
1560 1901 0.606604 GTTCCCTCTACGCCTTCACA 59.393 55.000 0.00 0.00 0.00 3.58
1569 1910 1.012486 CAACGCGGTGTTCCCTCTAC 61.012 60.000 17.95 0.00 39.29 2.59
1572 1913 2.280592 ACAACGCGGTGTTCCCTC 60.281 61.111 26.97 0.00 39.29 4.30
1575 1916 2.039062 AAACGACAACGCGGTGTTCC 62.039 55.000 32.94 18.73 43.96 3.62
1576 1917 0.576328 TAAACGACAACGCGGTGTTC 59.424 50.000 32.94 22.02 43.96 3.18
1582 1924 0.165079 AAGCCATAAACGACAACGCG 59.835 50.000 3.53 3.53 43.96 6.01
1584 1926 3.479006 CTGAAAGCCATAAACGACAACG 58.521 45.455 0.00 0.00 45.75 4.10
1585 1927 3.252458 ACCTGAAAGCCATAAACGACAAC 59.748 43.478 0.00 0.00 0.00 3.32
1591 1933 6.145534 GCTTTACAAACCTGAAAGCCATAAAC 59.854 38.462 7.22 0.00 46.01 2.01
1599 1941 4.813296 AGACGCTTTACAAACCTGAAAG 57.187 40.909 0.00 0.00 34.06 2.62
1610 1989 6.270815 TGAACTGGACATATAGACGCTTTAC 58.729 40.000 0.00 0.00 0.00 2.01
1611 1990 6.459670 TGAACTGGACATATAGACGCTTTA 57.540 37.500 0.00 0.00 0.00 1.85
1612 1991 5.339008 TGAACTGGACATATAGACGCTTT 57.661 39.130 0.00 0.00 0.00 3.51
1613 1992 5.339008 TTGAACTGGACATATAGACGCTT 57.661 39.130 0.00 0.00 0.00 4.68
1614 1993 5.069119 TCATTGAACTGGACATATAGACGCT 59.931 40.000 0.00 0.00 0.00 5.07
1615 1994 5.289595 TCATTGAACTGGACATATAGACGC 58.710 41.667 0.00 0.00 0.00 5.19
1616 1995 6.925718 ACATCATTGAACTGGACATATAGACG 59.074 38.462 0.00 0.00 0.00 4.18
1617 1996 7.712639 ACACATCATTGAACTGGACATATAGAC 59.287 37.037 0.00 0.00 0.00 2.59
1618 1997 7.712205 CACACATCATTGAACTGGACATATAGA 59.288 37.037 0.00 0.00 0.00 1.98
1619 1998 7.496920 ACACACATCATTGAACTGGACATATAG 59.503 37.037 0.00 0.00 0.00 1.31
1620 1999 7.337938 ACACACATCATTGAACTGGACATATA 58.662 34.615 0.00 0.00 0.00 0.86
1621 2000 6.182627 ACACACATCATTGAACTGGACATAT 58.817 36.000 0.00 0.00 0.00 1.78
1627 2006 4.572985 ACAACACACATCATTGAACTGG 57.427 40.909 0.00 0.00 0.00 4.00
1632 2011 5.126869 AGGAACAAACAACACACATCATTGA 59.873 36.000 0.00 0.00 0.00 2.57
1633 2012 5.350633 AGGAACAAACAACACACATCATTG 58.649 37.500 0.00 0.00 0.00 2.82
1634 2013 5.596836 AGGAACAAACAACACACATCATT 57.403 34.783 0.00 0.00 0.00 2.57
1647 2026 1.683385 AGCTGGCAAGAAGGAACAAAC 59.317 47.619 0.00 0.00 0.00 2.93
1654 2033 0.323178 ATCCACAGCTGGCAAGAAGG 60.323 55.000 19.93 7.91 37.49 3.46
1659 2038 0.692476 ACAGTATCCACAGCTGGCAA 59.308 50.000 19.93 2.35 37.49 4.52
1662 2041 0.745845 GCCACAGTATCCACAGCTGG 60.746 60.000 19.93 6.95 39.23 4.85
1688 2067 2.746362 GTGTGGAGGAGCTCAAATTCAG 59.254 50.000 17.19 0.00 31.08 3.02
1693 2072 1.118965 TCCGTGTGGAGGAGCTCAAA 61.119 55.000 17.19 0.00 40.17 2.69
1741 2120 3.006247 GACACCTTTCCTGATCTGCTTC 58.994 50.000 0.00 0.00 0.00 3.86
1759 2138 0.519961 TCGCGAAGAATGAGACGACA 59.480 50.000 6.20 0.00 0.00 4.35
1837 2216 1.079057 GAAGCCCCAGGAACGACTC 60.079 63.158 0.00 0.00 0.00 3.36
1840 2219 1.125093 TGAAGAAGCCCCAGGAACGA 61.125 55.000 0.00 0.00 0.00 3.85
1841 2220 0.674895 CTGAAGAAGCCCCAGGAACG 60.675 60.000 0.00 0.00 0.00 3.95
1842 2221 0.693049 TCTGAAGAAGCCCCAGGAAC 59.307 55.000 0.00 0.00 0.00 3.62
1852 2231 6.588552 CAATCGTGTTCTCTTTCTGAAGAAG 58.411 40.000 0.00 0.00 41.19 2.85
1863 2242 1.674221 GGCAGAGCAATCGTGTTCTCT 60.674 52.381 0.00 0.00 42.85 3.10
1922 2301 4.101741 GGTATCATACAAGGCAGAGTCCTT 59.898 45.833 0.00 0.00 46.86 3.36
1940 2319 4.291783 GCGAGTGTGTCATCTAAGGTATC 58.708 47.826 0.00 0.00 0.00 2.24
1944 2323 1.132453 TCGCGAGTGTGTCATCTAAGG 59.868 52.381 3.71 0.00 0.00 2.69
1947 2326 0.098905 GCTCGCGAGTGTGTCATCTA 59.901 55.000 34.46 0.00 0.00 1.98
2020 2399 1.384989 CGTCGGATGAGGGCTGTAGT 61.385 60.000 0.00 0.00 0.00 2.73
2136 2516 3.253188 CCTTGAAAAGCTCCGATTCACAA 59.747 43.478 0.00 0.00 44.44 3.33
2176 2556 7.284074 AGTATACATGTACACAGAGTAGAGCT 58.716 38.462 16.28 0.00 32.19 4.09
2177 2557 7.499321 AGTATACATGTACACAGAGTAGAGC 57.501 40.000 16.28 0.00 32.19 4.09
2244 2675 4.455606 AGACAACAAAAAGACCCTCTCAG 58.544 43.478 0.00 0.00 0.00 3.35
2247 2678 4.141779 ACGTAGACAACAAAAAGACCCTCT 60.142 41.667 0.00 0.00 0.00 3.69
2275 2706 3.616379 GCTGAAGAGATAGACACACAAGC 59.384 47.826 0.00 0.00 0.00 4.01
2345 2776 4.080863 AGGAACGCCTTTATGAGACTGAAT 60.081 41.667 0.00 0.00 43.90 2.57
2363 2794 3.004734 CCCACATGAACAACTTCAGGAAC 59.995 47.826 0.00 0.00 40.03 3.62
2367 2798 2.816087 CCTCCCACATGAACAACTTCAG 59.184 50.000 0.00 0.00 39.83 3.02
2528 2962 3.921677 TCACACGAATTAGTGGTCCTTC 58.078 45.455 20.75 0.00 45.80 3.46
2574 3008 4.927425 TCAGAACAGCGATGTAAAAGGTAC 59.073 41.667 6.79 0.00 0.00 3.34
2580 3014 3.006430 TCCAGTCAGAACAGCGATGTAAA 59.994 43.478 6.79 0.00 0.00 2.01
2599 3033 5.015515 TGCAGATTACAAAACCATCATCCA 58.984 37.500 0.00 0.00 0.00 3.41
2799 3234 4.010349 GTTCAAGGCCAGTGCTTTAGTAT 58.990 43.478 5.01 0.00 34.65 2.12
2827 3262 1.906574 TCCTGCGGAAATCAGTTACCT 59.093 47.619 0.00 0.00 0.00 3.08
2829 3264 4.662145 CAAATCCTGCGGAAATCAGTTAC 58.338 43.478 0.00 0.00 34.34 2.50
2988 3423 0.729116 CGGTGATTCCATGTGCAGAC 59.271 55.000 0.00 0.00 35.57 3.51
3020 3455 8.648968 CGATTTCTAGTTACTCAGAAACCTTTC 58.351 37.037 14.43 9.90 42.03 2.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.