Multiple sequence alignment - TraesCS1D01G288700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G288700 chr1D 100.000 3270 0 0 1 3270 386948278 386951547 0.000000e+00 6039.0
1 TraesCS1D01G288700 chr1D 83.015 942 128 18 2267 3192 387061042 387061967 0.000000e+00 824.0
2 TraesCS1D01G288700 chr1D 85.072 489 48 13 1281 1755 387059880 387060357 2.950000e-130 475.0
3 TraesCS1D01G288700 chr1D 78.961 385 63 13 1355 1736 387193564 387193933 2.520000e-61 246.0
4 TraesCS1D01G288700 chr1D 73.432 271 61 8 193 461 57921893 57921632 1.250000e-14 91.6
5 TraesCS1D01G288700 chr1A 93.149 978 44 14 2253 3215 486751700 486752669 0.000000e+00 1413.0
6 TraesCS1D01G288700 chr1A 86.850 1346 70 21 948 2239 486750281 486751573 0.000000e+00 1406.0
7 TraesCS1D01G288700 chr1A 85.861 976 112 23 2253 3216 486938730 486939691 0.000000e+00 1014.0
8 TraesCS1D01G288700 chr1A 84.211 513 43 14 1281 1763 486816642 486817146 6.390000e-127 464.0
9 TraesCS1D01G288700 chr1A 81.944 576 72 17 1 557 486748901 486749463 2.970000e-125 459.0
10 TraesCS1D01G288700 chr1A 83.629 507 50 12 1281 1762 486896608 486897106 2.310000e-121 446.0
11 TraesCS1D01G288700 chr1A 78.054 442 53 24 1323 1761 486953281 486953681 4.220000e-59 239.0
12 TraesCS1D01G288700 chr1A 82.906 234 16 8 1758 1968 486897147 486897379 4.310000e-44 189.0
13 TraesCS1D01G288700 chr1A 81.959 194 9 13 1759 1946 486817182 486817355 1.220000e-29 141.0
14 TraesCS1D01G288700 chr1A 73.529 272 59 11 193 461 56860113 56859852 1.250000e-14 91.6
15 TraesCS1D01G288700 chr1A 86.154 65 7 2 2445 2509 521676112 521676050 5.850000e-08 69.4
16 TraesCS1D01G288700 chr1B 89.903 1129 62 14 918 2030 520373678 520374770 0.000000e+00 1406.0
17 TraesCS1D01G288700 chr1B 84.818 909 109 16 2321 3216 520402169 520403061 0.000000e+00 887.0
18 TraesCS1D01G288700 chr1B 86.071 481 47 13 1284 1755 520390355 520390824 1.750000e-137 499.0
19 TraesCS1D01G288700 chr1B 91.391 302 21 3 622 919 484457855 484457555 3.040000e-110 409.0
20 TraesCS1D01G288700 chr1B 92.580 283 19 2 623 904 683991873 683992154 3.930000e-109 405.0
21 TraesCS1D01G288700 chr1B 79.720 429 55 19 1329 1740 520468717 520469130 6.910000e-72 281.0
22 TraesCS1D01G288700 chr1B 82.877 292 36 8 919 1200 520389914 520390201 1.950000e-62 250.0
23 TraesCS1D01G288700 chr1B 93.023 43 2 1 2033 2075 520401533 520401574 9.800000e-06 62.1
24 TraesCS1D01G288700 chr1B 100.000 28 0 0 593 620 520373666 520373693 6.000000e-03 52.8
25 TraesCS1D01G288700 chr2D 92.409 303 17 4 622 919 618294476 618294777 8.380000e-116 427.0
26 TraesCS1D01G288700 chr2B 93.310 284 17 2 622 904 798707258 798707540 5.050000e-113 418.0
27 TraesCS1D01G288700 chr2B 94.118 34 2 0 3040 3073 436990849 436990882 6.000000e-03 52.8
28 TraesCS1D01G288700 chr7D 91.391 302 20 4 622 919 49806893 49806594 3.040000e-110 409.0
29 TraesCS1D01G288700 chr7D 91.118 304 21 4 623 922 60015760 60016061 1.090000e-109 407.0
30 TraesCS1D01G288700 chr7D 91.089 303 22 3 622 920 141345337 141345638 3.930000e-109 405.0
31 TraesCS1D01G288700 chr5D 91.391 302 21 3 622 919 521864289 521863989 3.040000e-110 409.0
32 TraesCS1D01G288700 chr5D 78.974 195 24 10 2321 2510 545648200 545648018 2.060000e-22 117.0
33 TraesCS1D01G288700 chr5D 74.675 308 51 13 2219 2510 520348880 520349176 9.590000e-21 111.0
34 TraesCS1D01G288700 chr5D 94.340 53 2 1 402 453 530361954 530361902 2.700000e-11 80.5
35 TraesCS1D01G288700 chr3B 91.089 303 21 4 622 919 191186851 191186550 3.930000e-109 405.0
36 TraesCS1D01G288700 chr3B 97.297 37 1 0 2265 2301 11638759 11638723 2.720000e-06 63.9
37 TraesCS1D01G288700 chr7B 80.159 252 41 8 2266 2511 504961586 504961338 2.590000e-41 180.0
38 TraesCS1D01G288700 chr7B 78.378 259 40 6 2267 2510 668457825 668457568 1.570000e-33 154.0
39 TraesCS1D01G288700 chr3D 82.902 193 32 1 2321 2512 387771701 387771893 4.340000e-39 172.0
40 TraesCS1D01G288700 chr3D 81.915 94 14 2 2253 2343 384490798 384490891 3.500000e-10 76.8
41 TraesCS1D01G288700 chr3D 72.697 304 43 25 2219 2509 366207230 366207506 7.570000e-07 65.8
42 TraesCS1D01G288700 chr3D 100.000 31 0 0 2267 2297 328376484 328376454 1.270000e-04 58.4
43 TraesCS1D01G288700 chr3A 84.940 166 21 4 2322 2483 382350108 382350273 7.260000e-37 165.0
44 TraesCS1D01G288700 chr6B 81.463 205 25 9 2321 2521 535390536 535390341 4.370000e-34 156.0
45 TraesCS1D01G288700 chr5A 76.806 263 39 11 2253 2511 667116489 667116733 9.520000e-26 128.0
46 TraesCS1D01G288700 chr4A 75.379 264 54 8 194 455 665458150 665458404 2.060000e-22 117.0
47 TraesCS1D01G288700 chr6A 81.102 127 24 0 329 455 38344172 38344298 5.770000e-18 102.0
48 TraesCS1D01G288700 chr6A 77.953 127 26 2 332 456 98034406 98034280 9.730000e-11 78.7
49 TraesCS1D01G288700 chr2A 79.389 131 25 2 336 465 555495201 555495072 1.250000e-14 91.6
50 TraesCS1D01G288700 chr5B 76.582 158 31 5 300 453 669449228 669449073 7.520000e-12 82.4
51 TraesCS1D01G288700 chr4D 75.132 189 40 6 192 376 487458757 487458572 7.520000e-12 82.4
52 TraesCS1D01G288700 chr7A 74.112 197 39 11 261 449 437608093 437608285 1.630000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G288700 chr1D 386948278 386951547 3269 False 6039.000000 6039 100.000000 1 3270 1 chr1D.!!$F1 3269
1 TraesCS1D01G288700 chr1D 387059880 387061967 2087 False 649.500000 824 84.043500 1281 3192 2 chr1D.!!$F3 1911
2 TraesCS1D01G288700 chr1A 486748901 486752669 3768 False 1092.666667 1413 87.314333 1 3215 3 chr1A.!!$F3 3214
3 TraesCS1D01G288700 chr1A 486938730 486939691 961 False 1014.000000 1014 85.861000 2253 3216 1 chr1A.!!$F1 963
4 TraesCS1D01G288700 chr1A 486896608 486897379 771 False 317.500000 446 83.267500 1281 1968 2 chr1A.!!$F5 687
5 TraesCS1D01G288700 chr1A 486816642 486817355 713 False 302.500000 464 83.085000 1281 1946 2 chr1A.!!$F4 665
6 TraesCS1D01G288700 chr1B 520373666 520374770 1104 False 729.400000 1406 94.951500 593 2030 2 chr1B.!!$F3 1437
7 TraesCS1D01G288700 chr1B 520401533 520403061 1528 False 474.550000 887 88.920500 2033 3216 2 chr1B.!!$F5 1183
8 TraesCS1D01G288700 chr1B 520389914 520390824 910 False 374.500000 499 84.474000 919 1755 2 chr1B.!!$F4 836

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
325 341 0.097499 CGGTATCTCGTGTGTGCGTA 59.903 55.0 0.00 0.0 0.0 4.42 F
1270 2125 0.032403 CACTCCGGTCGTGTGGTTAA 59.968 55.0 15.44 0.0 0.0 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1552 2497 0.036164 TTGGTAGTGATGCCGCTGTT 59.964 50.0 0.0 0.0 34.5 3.16 R
3223 4747 0.107017 CGGACCCCCTACTACTCGAA 60.107 60.0 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.103094 TCGCCATCTTCCATGTCCTTAG 59.897 50.000 0.00 0.00 0.00 2.18
25 26 2.225467 GCCATCTTCCATGTCCTTAGC 58.775 52.381 0.00 0.00 0.00 3.09
33 34 1.040646 CATGTCCTTAGCGGCTAGGA 58.959 55.000 19.45 18.80 0.00 2.94
38 39 1.206371 TCCTTAGCGGCTAGGACAAAC 59.794 52.381 19.45 0.00 0.00 2.93
43 44 1.348036 AGCGGCTAGGACAAACTCTTT 59.652 47.619 0.00 0.00 0.00 2.52
50 51 5.180304 GGCTAGGACAAACTCTTTCTTTCAG 59.820 44.000 0.00 0.00 0.00 3.02
57 58 8.076781 GGACAAACTCTTTCTTTCAGGTTTATC 58.923 37.037 0.00 0.00 0.00 1.75
87 88 9.170734 TGAGATTATGGATTCACTTTCTCTTTG 57.829 33.333 9.26 0.00 31.25 2.77
88 89 7.994194 AGATTATGGATTCACTTTCTCTTTGC 58.006 34.615 0.00 0.00 0.00 3.68
89 90 6.515272 TTATGGATTCACTTTCTCTTTGCC 57.485 37.500 0.00 0.00 0.00 4.52
92 93 3.366781 GGATTCACTTTCTCTTTGCCTGC 60.367 47.826 0.00 0.00 0.00 4.85
93 94 2.645838 TCACTTTCTCTTTGCCTGCT 57.354 45.000 0.00 0.00 0.00 4.24
95 96 0.957362 ACTTTCTCTTTGCCTGCTGC 59.043 50.000 0.00 0.00 41.77 5.25
113 129 2.280524 TTCGGCGGCCAATATCGG 60.281 61.111 20.71 0.11 0.00 4.18
124 140 1.603802 CCAATATCGGTGCATTCGCTT 59.396 47.619 7.42 1.63 39.64 4.68
136 152 2.678336 GCATTCGCTTTGGCTAGTAGTT 59.322 45.455 0.00 0.00 36.09 2.24
151 167 8.599792 TGGCTAGTAGTTTAGGTTATGTTTTCT 58.400 33.333 0.00 0.00 0.00 2.52
159 175 8.847196 AGTTTAGGTTATGTTTTCTTGTCCTTC 58.153 33.333 0.00 0.00 0.00 3.46
160 176 8.847196 GTTTAGGTTATGTTTTCTTGTCCTTCT 58.153 33.333 0.00 0.00 0.00 2.85
192 208 3.308323 GCGGATGACATCACTTCTTCTTC 59.692 47.826 17.08 0.00 0.00 2.87
193 209 4.753233 CGGATGACATCACTTCTTCTTCT 58.247 43.478 17.08 0.00 0.00 2.85
194 210 5.174395 CGGATGACATCACTTCTTCTTCTT 58.826 41.667 17.08 0.00 0.00 2.52
195 211 5.290643 CGGATGACATCACTTCTTCTTCTTC 59.709 44.000 17.08 0.00 0.00 2.87
196 212 6.405538 GGATGACATCACTTCTTCTTCTTCT 58.594 40.000 17.08 0.00 0.00 2.85
197 213 6.878389 GGATGACATCACTTCTTCTTCTTCTT 59.122 38.462 17.08 0.00 0.00 2.52
198 214 7.064490 GGATGACATCACTTCTTCTTCTTCTTC 59.936 40.741 17.08 0.00 0.00 2.87
199 215 7.060383 TGACATCACTTCTTCTTCTTCTTCT 57.940 36.000 0.00 0.00 0.00 2.85
200 216 7.504403 TGACATCACTTCTTCTTCTTCTTCTT 58.496 34.615 0.00 0.00 0.00 2.52
201 217 7.655328 TGACATCACTTCTTCTTCTTCTTCTTC 59.345 37.037 0.00 0.00 0.00 2.87
209 225 9.250624 CTTCTTCTTCTTCTTCTTCGAGTTTTA 57.749 33.333 0.00 0.00 0.00 1.52
213 229 8.943909 TCTTCTTCTTCTTCGAGTTTTACTTT 57.056 30.769 0.00 0.00 0.00 2.66
217 233 4.986659 TCTTCTTCGAGTTTTACTTTCGGG 59.013 41.667 0.00 0.00 35.21 5.14
240 256 1.386961 CGATCCGTCTCGAATTCGTC 58.613 55.000 25.93 13.84 41.12 4.20
242 258 1.065102 GATCCGTCTCGAATTCGTCCA 59.935 52.381 25.93 7.61 40.80 4.02
244 260 1.200483 CCGTCTCGAATTCGTCCATG 58.800 55.000 25.93 15.60 40.80 3.66
260 276 3.312421 GTCCATGTGAACATAACCGATGG 59.688 47.826 0.00 0.00 40.18 3.51
278 294 2.613691 TGGAGCTTCGACGTAAATTCC 58.386 47.619 0.00 0.00 0.00 3.01
279 295 1.931841 GGAGCTTCGACGTAAATTCCC 59.068 52.381 0.00 0.00 0.00 3.97
288 304 0.928229 CGTAAATTCCCGCCTTCTCG 59.072 55.000 0.00 0.00 0.00 4.04
289 305 0.656259 GTAAATTCCCGCCTTCTCGC 59.344 55.000 0.00 0.00 0.00 5.03
300 316 0.386858 CCTTCTCGCTGAAACGACGA 60.387 55.000 0.00 0.00 37.09 4.20
310 326 1.876799 TGAAACGACGAGGTTACGGTA 59.123 47.619 0.00 0.00 37.61 4.02
314 330 1.936547 ACGACGAGGTTACGGTATCTC 59.063 52.381 0.00 8.22 37.61 2.75
320 336 2.421424 GAGGTTACGGTATCTCGTGTGT 59.579 50.000 0.00 0.00 43.70 3.72
322 338 1.916000 GTTACGGTATCTCGTGTGTGC 59.084 52.381 0.00 0.00 43.70 4.57
325 341 0.097499 CGGTATCTCGTGTGTGCGTA 59.903 55.000 0.00 0.00 0.00 4.42
344 360 3.363378 CGTAAGATGGCGAGATTTGATGC 60.363 47.826 0.00 0.00 43.02 3.91
354 370 2.097825 AGATTTGATGCCAGGTGCTTC 58.902 47.619 0.00 0.00 42.82 3.86
359 375 1.839354 TGATGCCAGGTGCTTCAGATA 59.161 47.619 0.00 0.00 45.97 1.98
372 388 6.016777 GGTGCTTCAGATATATTCAAGGGTTG 60.017 42.308 0.00 0.00 0.00 3.77
387 403 4.273148 AGGGTTGAACACTGATGACTAC 57.727 45.455 0.00 0.00 25.25 2.73
388 404 3.646162 AGGGTTGAACACTGATGACTACA 59.354 43.478 0.00 0.00 25.25 2.74
422 438 2.678786 TCCTTAGGGACACGTGCAT 58.321 52.632 17.22 0.00 36.57 3.96
426 442 2.002586 CTTAGGGACACGTGCATGAAG 58.997 52.381 17.22 9.25 0.00 3.02
435 451 0.179215 CGTGCATGAAGACTTTCGGC 60.179 55.000 0.00 0.00 36.99 5.54
453 469 0.955428 GCTGTCATCGACAAGGCCAA 60.955 55.000 5.01 0.00 42.26 4.52
456 472 1.202758 TGTCATCGACAAGGCCAAGTT 60.203 47.619 5.01 0.00 39.78 2.66
459 475 1.398390 CATCGACAAGGCCAAGTTAGC 59.602 52.381 5.01 0.00 0.00 3.09
470 486 3.316308 GGCCAAGTTAGCTATGACAATGG 59.684 47.826 0.00 12.64 31.38 3.16
494 510 2.946762 GGCGGCTTGTTCTGACAC 59.053 61.111 0.00 0.00 34.98 3.67
495 511 2.617274 GGCGGCTTGTTCTGACACC 61.617 63.158 0.00 0.00 34.98 4.16
497 513 1.444119 GCGGCTTGTTCTGACACCAA 61.444 55.000 0.00 0.00 34.98 3.67
515 531 3.596214 CCAATAGTGGTCGTTTGCTAGT 58.404 45.455 0.00 0.00 40.42 2.57
516 532 3.617263 CCAATAGTGGTCGTTTGCTAGTC 59.383 47.826 0.00 0.00 40.42 2.59
517 533 4.495422 CAATAGTGGTCGTTTGCTAGTCT 58.505 43.478 0.00 0.00 0.00 3.24
520 536 2.492484 AGTGGTCGTTTGCTAGTCTAGG 59.508 50.000 8.97 0.00 0.00 3.02
521 537 1.822990 TGGTCGTTTGCTAGTCTAGGG 59.177 52.381 8.97 0.00 0.00 3.53
522 538 1.136500 GGTCGTTTGCTAGTCTAGGGG 59.864 57.143 8.97 0.00 0.00 4.79
526 542 3.325716 TCGTTTGCTAGTCTAGGGGTTTT 59.674 43.478 8.97 0.00 0.00 2.43
527 543 3.435671 CGTTTGCTAGTCTAGGGGTTTTG 59.564 47.826 8.97 0.00 0.00 2.44
528 544 4.648651 GTTTGCTAGTCTAGGGGTTTTGA 58.351 43.478 8.97 0.00 0.00 2.69
529 545 3.975168 TGCTAGTCTAGGGGTTTTGAC 57.025 47.619 8.97 0.00 0.00 3.18
537 555 9.516546 CTAGTCTAGGGGTTTTGACTTAATTTT 57.483 33.333 0.00 0.00 39.94 1.82
539 557 8.638873 AGTCTAGGGGTTTTGACTTAATTTTTG 58.361 33.333 0.00 0.00 36.50 2.44
545 563 6.964370 GGGTTTTGACTTAATTTTTGTTGTGC 59.036 34.615 0.00 0.00 0.00 4.57
548 566 8.439286 GTTTTGACTTAATTTTTGTTGTGCTCA 58.561 29.630 0.00 0.00 0.00 4.26
552 570 7.978414 TGACTTAATTTTTGTTGTGCTCATCAA 59.022 29.630 7.92 7.92 33.26 2.57
557 575 8.715191 AATTTTTGTTGTGCTCATCAACTTTA 57.285 26.923 10.88 0.00 43.54 1.85
558 576 7.518731 TTTTTGTTGTGCTCATCAACTTTAC 57.481 32.000 10.88 0.00 43.54 2.01
559 577 5.826601 TTGTTGTGCTCATCAACTTTACA 57.173 34.783 7.92 0.00 43.54 2.41
560 578 6.389830 TTGTTGTGCTCATCAACTTTACAT 57.610 33.333 7.92 0.00 43.54 2.29
561 579 6.389830 TGTTGTGCTCATCAACTTTACATT 57.610 33.333 9.57 0.00 43.54 2.71
562 580 6.437928 TGTTGTGCTCATCAACTTTACATTC 58.562 36.000 9.57 0.00 43.54 2.67
563 581 5.281693 TGTGCTCATCAACTTTACATTCG 57.718 39.130 0.00 0.00 0.00 3.34
564 582 4.994217 TGTGCTCATCAACTTTACATTCGA 59.006 37.500 0.00 0.00 0.00 3.71
566 584 6.149308 TGTGCTCATCAACTTTACATTCGAAT 59.851 34.615 4.39 4.39 0.00 3.34
567 585 6.684555 GTGCTCATCAACTTTACATTCGAATC 59.315 38.462 7.92 0.00 0.00 2.52
568 586 6.183360 TGCTCATCAACTTTACATTCGAATCC 60.183 38.462 7.92 0.00 0.00 3.01
569 587 6.037610 GCTCATCAACTTTACATTCGAATCCT 59.962 38.462 7.92 0.00 0.00 3.24
570 588 7.414540 GCTCATCAACTTTACATTCGAATCCTT 60.415 37.037 7.92 0.00 0.00 3.36
573 591 9.410556 CATCAACTTTACATTCGAATCCTTTTT 57.589 29.630 7.92 0.00 0.00 1.94
604 864 3.518998 GCGAGAGTAGCCTCCGCA 61.519 66.667 15.49 0.00 46.97 5.69
605 865 3.064987 GCGAGAGTAGCCTCCGCAA 62.065 63.158 15.49 0.00 46.97 4.85
606 866 1.736586 CGAGAGTAGCCTCCGCAAT 59.263 57.895 0.00 0.00 38.58 3.56
607 867 0.952280 CGAGAGTAGCCTCCGCAATA 59.048 55.000 0.00 0.00 38.58 1.90
608 868 1.337071 CGAGAGTAGCCTCCGCAATAA 59.663 52.381 0.00 0.00 38.58 1.40
609 869 2.745102 GAGAGTAGCCTCCGCAATAAC 58.255 52.381 0.00 0.00 38.58 1.89
610 870 1.067212 AGAGTAGCCTCCGCAATAACG 59.933 52.381 0.00 0.00 38.58 3.18
611 871 1.066605 GAGTAGCCTCCGCAATAACGA 59.933 52.381 0.00 0.00 37.52 3.85
612 872 1.479323 AGTAGCCTCCGCAATAACGAA 59.521 47.619 0.00 0.00 37.52 3.85
613 873 2.102588 AGTAGCCTCCGCAATAACGAAT 59.897 45.455 0.00 0.00 37.52 3.34
614 874 2.038387 AGCCTCCGCAATAACGAATT 57.962 45.000 0.00 0.00 37.52 2.17
615 875 1.670811 AGCCTCCGCAATAACGAATTG 59.329 47.619 9.83 9.83 46.62 2.32
616 876 1.668751 GCCTCCGCAATAACGAATTGA 59.331 47.619 16.02 0.00 46.81 2.57
617 877 2.096819 GCCTCCGCAATAACGAATTGAA 59.903 45.455 16.02 3.66 46.81 2.69
618 878 3.680789 CCTCCGCAATAACGAATTGAAC 58.319 45.455 16.02 2.63 46.81 3.18
619 879 3.342269 CTCCGCAATAACGAATTGAACG 58.658 45.455 16.02 11.44 46.81 3.95
620 880 2.994578 TCCGCAATAACGAATTGAACGA 59.005 40.909 16.02 7.10 46.81 3.85
621 881 3.088552 CCGCAATAACGAATTGAACGAC 58.911 45.455 16.02 1.54 46.81 4.34
622 882 2.763461 CGCAATAACGAATTGAACGACG 59.237 45.455 16.02 0.00 46.81 5.12
623 883 3.480665 CGCAATAACGAATTGAACGACGA 60.481 43.478 16.02 0.00 46.81 4.20
624 884 4.387936 GCAATAACGAATTGAACGACGAA 58.612 39.130 16.02 0.00 46.81 3.85
625 885 4.256766 GCAATAACGAATTGAACGACGAAC 59.743 41.667 16.02 0.00 46.81 3.95
626 886 2.936050 AACGAATTGAACGACGAACC 57.064 45.000 0.00 0.00 34.70 3.62
627 887 1.855513 ACGAATTGAACGACGAACCA 58.144 45.000 0.00 0.00 34.70 3.67
628 888 2.203401 ACGAATTGAACGACGAACCAA 58.797 42.857 0.00 2.83 34.70 3.67
629 889 2.033492 ACGAATTGAACGACGAACCAAC 60.033 45.455 0.00 0.00 34.70 3.77
630 890 2.660900 CGAATTGAACGACGAACCAACC 60.661 50.000 0.00 0.00 0.00 3.77
631 891 2.249844 ATTGAACGACGAACCAACCT 57.750 45.000 0.00 0.00 0.00 3.50
632 892 1.292061 TTGAACGACGAACCAACCTG 58.708 50.000 0.00 0.00 0.00 4.00
633 893 0.176219 TGAACGACGAACCAACCTGT 59.824 50.000 0.00 0.00 0.00 4.00
634 894 0.580104 GAACGACGAACCAACCTGTG 59.420 55.000 0.00 0.00 0.00 3.66
647 907 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
648 908 1.354368 ACCTGTGGTTGGATGGTTAGG 59.646 52.381 0.00 0.00 27.29 2.69
649 909 1.340991 CCTGTGGTTGGATGGTTAGGG 60.341 57.143 0.00 0.00 0.00 3.53
650 910 0.701731 TGTGGTTGGATGGTTAGGGG 59.298 55.000 0.00 0.00 0.00 4.79
651 911 0.996583 GTGGTTGGATGGTTAGGGGA 59.003 55.000 0.00 0.00 0.00 4.81
652 912 0.996583 TGGTTGGATGGTTAGGGGAC 59.003 55.000 0.00 0.00 0.00 4.46
654 914 1.064685 GGTTGGATGGTTAGGGGACTG 60.065 57.143 0.00 0.00 43.88 3.51
655 915 1.633945 GTTGGATGGTTAGGGGACTGT 59.366 52.381 0.00 0.00 43.88 3.55
656 916 1.285280 TGGATGGTTAGGGGACTGTG 58.715 55.000 0.00 0.00 43.88 3.66
657 917 0.546598 GGATGGTTAGGGGACTGTGG 59.453 60.000 0.00 0.00 43.88 4.17
658 918 1.286248 GATGGTTAGGGGACTGTGGT 58.714 55.000 0.00 0.00 43.88 4.16
659 919 2.474112 GATGGTTAGGGGACTGTGGTA 58.526 52.381 0.00 0.00 43.88 3.25
660 920 2.653543 TGGTTAGGGGACTGTGGTAT 57.346 50.000 0.00 0.00 43.88 2.73
661 921 2.474112 TGGTTAGGGGACTGTGGTATC 58.526 52.381 0.00 0.00 43.88 2.24
662 922 2.045326 TGGTTAGGGGACTGTGGTATCT 59.955 50.000 0.00 0.00 43.88 1.98
663 923 2.699321 GGTTAGGGGACTGTGGTATCTC 59.301 54.545 0.00 0.00 43.88 2.75
664 924 2.699321 GTTAGGGGACTGTGGTATCTCC 59.301 54.545 0.00 0.00 43.88 3.71
665 925 0.716591 AGGGGACTGTGGTATCTCCA 59.283 55.000 0.00 0.00 41.63 3.86
666 926 2.091278 TAGGGGACTGTGGTATCTCCAG 60.091 54.545 0.00 0.00 44.48 3.86
667 927 4.674704 TAGGGGACTGTGGTATCTCCAGT 61.675 52.174 0.00 0.00 44.48 4.00
675 935 2.682594 TGGTATCTCCAGTCCATCAGG 58.317 52.381 0.00 0.00 41.93 3.86
676 936 1.974236 GGTATCTCCAGTCCATCAGGG 59.026 57.143 0.00 0.00 35.97 4.45
677 937 1.974236 GTATCTCCAGTCCATCAGGGG 59.026 57.143 0.00 0.00 37.22 4.79
678 938 0.344790 ATCTCCAGTCCATCAGGGGT 59.655 55.000 0.00 0.00 37.22 4.95
679 939 0.119155 TCTCCAGTCCATCAGGGGTT 59.881 55.000 0.00 0.00 37.22 4.11
680 940 0.543749 CTCCAGTCCATCAGGGGTTC 59.456 60.000 0.00 0.00 37.22 3.62
681 941 0.178876 TCCAGTCCATCAGGGGTTCA 60.179 55.000 0.00 0.00 37.22 3.18
682 942 0.921896 CCAGTCCATCAGGGGTTCAT 59.078 55.000 0.00 0.00 37.22 2.57
683 943 1.409241 CCAGTCCATCAGGGGTTCATG 60.409 57.143 0.00 0.00 37.22 3.07
684 944 1.283029 CAGTCCATCAGGGGTTCATGT 59.717 52.381 0.00 0.00 37.22 3.21
685 945 1.561542 AGTCCATCAGGGGTTCATGTC 59.438 52.381 0.00 0.00 37.22 3.06
686 946 0.918983 TCCATCAGGGGTTCATGTCC 59.081 55.000 0.00 0.00 37.22 4.02
687 947 0.921896 CCATCAGGGGTTCATGTCCT 59.078 55.000 8.91 2.78 0.00 3.85
688 948 1.409241 CCATCAGGGGTTCATGTCCTG 60.409 57.143 15.68 15.68 46.91 3.86
689 949 0.921896 ATCAGGGGTTCATGTCCTGG 59.078 55.000 19.07 0.00 45.89 4.45
690 950 0.475632 TCAGGGGTTCATGTCCTGGT 60.476 55.000 19.07 2.37 45.89 4.00
691 951 0.322816 CAGGGGTTCATGTCCTGGTG 60.323 60.000 14.67 6.02 43.09 4.17
692 952 1.678970 GGGGTTCATGTCCTGGTGC 60.679 63.158 8.91 0.00 0.00 5.01
693 953 1.380302 GGGTTCATGTCCTGGTGCT 59.620 57.895 8.91 0.00 0.00 4.40
694 954 0.678048 GGGTTCATGTCCTGGTGCTC 60.678 60.000 8.91 0.00 0.00 4.26
695 955 1.021390 GGTTCATGTCCTGGTGCTCG 61.021 60.000 0.00 0.00 0.00 5.03
696 956 1.375908 TTCATGTCCTGGTGCTCGC 60.376 57.895 0.00 0.00 0.00 5.03
697 957 2.046988 CATGTCCTGGTGCTCGCA 60.047 61.111 0.00 0.00 0.00 5.10
698 958 1.450848 CATGTCCTGGTGCTCGCAT 60.451 57.895 0.00 0.00 0.00 4.73
699 959 1.028330 CATGTCCTGGTGCTCGCATT 61.028 55.000 0.00 0.00 0.00 3.56
700 960 0.322816 ATGTCCTGGTGCTCGCATTT 60.323 50.000 0.00 0.00 0.00 2.32
701 961 0.323302 TGTCCTGGTGCTCGCATTTA 59.677 50.000 0.00 0.00 0.00 1.40
702 962 1.065491 TGTCCTGGTGCTCGCATTTAT 60.065 47.619 0.00 0.00 0.00 1.40
703 963 2.017049 GTCCTGGTGCTCGCATTTATT 58.983 47.619 0.00 0.00 0.00 1.40
704 964 2.032178 GTCCTGGTGCTCGCATTTATTC 59.968 50.000 0.00 0.00 0.00 1.75
705 965 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
706 966 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
707 967 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
708 968 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
709 969 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
710 970 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
711 971 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
712 972 3.953612 TGCTCGCATTTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
713 973 5.008613 GTGCTCGCATTTATTCCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
714 974 5.769662 TGCTCGCATTTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
715 975 6.265196 TGCTCGCATTTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
716 976 7.147976 GCTCGCATTTATTCCTGGATTTATTT 58.852 34.615 0.00 0.00 0.00 1.40
717 977 7.327032 GCTCGCATTTATTCCTGGATTTATTTC 59.673 37.037 0.00 0.00 0.00 2.17
718 978 8.231692 TCGCATTTATTCCTGGATTTATTTCA 57.768 30.769 0.00 0.00 0.00 2.69
719 979 8.352201 TCGCATTTATTCCTGGATTTATTTCAG 58.648 33.333 0.00 0.00 0.00 3.02
720 980 7.596248 CGCATTTATTCCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 46.91 3.86
729 989 5.901552 TGGATTTATTTCAGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
730 990 4.976116 GGATTTATTTCAGGATTTTCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
731 991 5.220970 GGATTTATTTCAGGATTTTCGGCGA 60.221 40.000 4.99 4.99 0.00 5.54
732 992 5.828299 TTTATTTCAGGATTTTCGGCGAT 57.172 34.783 11.76 0.00 0.00 4.58
733 993 3.698029 ATTTCAGGATTTTCGGCGATG 57.302 42.857 11.76 4.79 0.00 3.84
734 994 0.732571 TTCAGGATTTTCGGCGATGC 59.267 50.000 11.76 0.31 0.00 3.91
735 995 1.010797 CAGGATTTTCGGCGATGCG 60.011 57.895 11.76 0.00 0.00 4.73
747 1007 3.272766 CGATGCGCATTCAGTAGGA 57.727 52.632 26.12 0.00 0.00 2.94
748 1008 1.135046 CGATGCGCATTCAGTAGGAG 58.865 55.000 26.12 4.12 0.00 3.69
749 1009 1.506493 GATGCGCATTCAGTAGGAGG 58.494 55.000 26.12 0.00 0.00 4.30
750 1010 1.069204 GATGCGCATTCAGTAGGAGGA 59.931 52.381 26.12 0.00 0.00 3.71
751 1011 0.461548 TGCGCATTCAGTAGGAGGAG 59.538 55.000 5.66 0.00 0.00 3.69
752 1012 0.747255 GCGCATTCAGTAGGAGGAGA 59.253 55.000 0.30 0.00 0.00 3.71
753 1013 1.537135 GCGCATTCAGTAGGAGGAGAC 60.537 57.143 0.30 0.00 0.00 3.36
754 1014 1.268794 CGCATTCAGTAGGAGGAGACG 60.269 57.143 0.00 0.00 0.00 4.18
755 1015 1.751924 GCATTCAGTAGGAGGAGACGT 59.248 52.381 0.00 0.00 0.00 4.34
756 1016 2.166664 GCATTCAGTAGGAGGAGACGTT 59.833 50.000 0.00 0.00 0.00 3.99
757 1017 3.735514 GCATTCAGTAGGAGGAGACGTTC 60.736 52.174 0.00 0.00 0.00 3.95
778 1038 4.649845 TCGATGACGAGGTGCCTA 57.350 55.556 0.00 0.00 43.81 3.93
779 1039 2.104267 TCGATGACGAGGTGCCTAC 58.896 57.895 0.00 0.00 43.81 3.18
780 1040 1.381928 TCGATGACGAGGTGCCTACC 61.382 60.000 0.00 0.00 43.81 3.18
789 1049 2.540145 GGTGCCTACCGTGACTTTG 58.460 57.895 0.00 0.00 37.19 2.77
790 1050 0.250166 GGTGCCTACCGTGACTTTGT 60.250 55.000 0.00 0.00 37.19 2.83
791 1051 1.001181 GGTGCCTACCGTGACTTTGTA 59.999 52.381 0.00 0.00 37.19 2.41
792 1052 2.548493 GGTGCCTACCGTGACTTTGTAA 60.548 50.000 0.00 0.00 37.19 2.41
793 1053 3.132925 GTGCCTACCGTGACTTTGTAAA 58.867 45.455 0.00 0.00 0.00 2.01
794 1054 3.749609 GTGCCTACCGTGACTTTGTAAAT 59.250 43.478 0.00 0.00 0.00 1.40
795 1055 4.214758 GTGCCTACCGTGACTTTGTAAATT 59.785 41.667 0.00 0.00 0.00 1.82
796 1056 4.822896 TGCCTACCGTGACTTTGTAAATTT 59.177 37.500 0.00 0.00 0.00 1.82
797 1057 5.049267 TGCCTACCGTGACTTTGTAAATTTC 60.049 40.000 0.00 0.00 0.00 2.17
798 1058 5.049267 GCCTACCGTGACTTTGTAAATTTCA 60.049 40.000 0.00 0.00 0.00 2.69
799 1059 6.513720 GCCTACCGTGACTTTGTAAATTTCAA 60.514 38.462 0.00 0.00 0.00 2.69
800 1060 7.075741 CCTACCGTGACTTTGTAAATTTCAAG 58.924 38.462 0.00 0.00 0.00 3.02
801 1061 6.687081 ACCGTGACTTTGTAAATTTCAAGA 57.313 33.333 10.26 0.00 0.00 3.02
802 1062 7.272037 ACCGTGACTTTGTAAATTTCAAGAT 57.728 32.000 10.26 2.01 0.00 2.40
803 1063 7.138736 ACCGTGACTTTGTAAATTTCAAGATG 58.861 34.615 10.26 5.69 0.00 2.90
804 1064 7.012894 ACCGTGACTTTGTAAATTTCAAGATGA 59.987 33.333 10.26 0.00 0.00 2.92
805 1065 8.023128 CCGTGACTTTGTAAATTTCAAGATGAT 58.977 33.333 10.26 0.00 0.00 2.45
810 1070 9.807649 ACTTTGTAAATTTCAAGATGATATGCC 57.192 29.630 10.26 0.00 0.00 4.40
811 1071 8.854979 TTTGTAAATTTCAAGATGATATGCCG 57.145 30.769 0.00 0.00 0.00 5.69
812 1072 6.969366 TGTAAATTTCAAGATGATATGCCGG 58.031 36.000 0.00 0.00 0.00 6.13
813 1073 4.510038 AATTTCAAGATGATATGCCGGC 57.490 40.909 22.73 22.73 0.00 6.13
814 1074 2.936919 TTCAAGATGATATGCCGGCT 57.063 45.000 29.70 15.76 0.00 5.52
815 1075 2.462456 TCAAGATGATATGCCGGCTC 57.538 50.000 29.70 17.89 0.00 4.70
816 1076 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
817 1077 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
818 1078 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
819 1079 1.696336 AGATGATATGCCGGCTCAGTT 59.304 47.619 29.70 9.04 0.00 3.16
820 1080 2.105477 AGATGATATGCCGGCTCAGTTT 59.895 45.455 29.70 8.26 0.00 2.66
821 1081 2.418368 TGATATGCCGGCTCAGTTTT 57.582 45.000 29.70 5.10 0.00 2.43
822 1082 2.722094 TGATATGCCGGCTCAGTTTTT 58.278 42.857 29.70 3.35 0.00 1.94
823 1083 2.682856 TGATATGCCGGCTCAGTTTTTC 59.317 45.455 29.70 12.91 0.00 2.29
824 1084 1.083489 TATGCCGGCTCAGTTTTTCG 58.917 50.000 29.70 0.00 0.00 3.46
825 1085 1.586154 ATGCCGGCTCAGTTTTTCGG 61.586 55.000 29.70 0.00 43.13 4.30
826 1086 1.964373 GCCGGCTCAGTTTTTCGGA 60.964 57.895 22.15 0.00 42.94 4.55
827 1087 1.912371 GCCGGCTCAGTTTTTCGGAG 61.912 60.000 22.15 0.00 42.94 4.63
828 1088 0.320421 CCGGCTCAGTTTTTCGGAGA 60.320 55.000 0.00 0.00 42.94 3.71
829 1089 1.676014 CCGGCTCAGTTTTTCGGAGAT 60.676 52.381 0.00 0.00 42.94 2.75
830 1090 1.394917 CGGCTCAGTTTTTCGGAGATG 59.605 52.381 0.00 0.00 40.01 2.90
831 1091 1.131315 GGCTCAGTTTTTCGGAGATGC 59.869 52.381 0.00 0.00 40.01 3.91
832 1092 2.079925 GCTCAGTTTTTCGGAGATGCT 58.920 47.619 0.00 0.00 40.01 3.79
833 1093 2.095053 GCTCAGTTTTTCGGAGATGCTC 59.905 50.000 0.00 0.00 40.01 4.26
834 1094 3.329386 CTCAGTTTTTCGGAGATGCTCA 58.671 45.455 0.00 0.00 40.01 4.26
835 1095 3.937706 CTCAGTTTTTCGGAGATGCTCAT 59.062 43.478 0.00 0.00 40.01 2.90
836 1096 5.084818 TCAGTTTTTCGGAGATGCTCATA 57.915 39.130 0.00 0.00 35.04 2.15
837 1097 5.111989 TCAGTTTTTCGGAGATGCTCATAG 58.888 41.667 0.00 0.00 35.04 2.23
838 1098 4.272018 CAGTTTTTCGGAGATGCTCATAGG 59.728 45.833 0.00 0.00 35.04 2.57
839 1099 3.475566 TTTTCGGAGATGCTCATAGGG 57.524 47.619 0.00 0.00 35.04 3.53
840 1100 2.088104 TTCGGAGATGCTCATAGGGT 57.912 50.000 0.00 0.00 35.04 4.34
841 1101 2.088104 TCGGAGATGCTCATAGGGTT 57.912 50.000 0.00 0.00 31.08 4.11
842 1102 3.238788 TCGGAGATGCTCATAGGGTTA 57.761 47.619 0.00 0.00 31.08 2.85
843 1103 3.157881 TCGGAGATGCTCATAGGGTTAG 58.842 50.000 0.00 0.00 31.08 2.34
844 1104 2.232452 CGGAGATGCTCATAGGGTTAGG 59.768 54.545 0.00 0.00 31.08 2.69
845 1105 2.569404 GGAGATGCTCATAGGGTTAGGG 59.431 54.545 0.00 0.00 31.08 3.53
846 1106 3.243724 GAGATGCTCATAGGGTTAGGGT 58.756 50.000 0.00 0.00 0.00 4.34
847 1107 2.975489 AGATGCTCATAGGGTTAGGGTG 59.025 50.000 0.00 0.00 0.00 4.61
848 1108 2.263895 TGCTCATAGGGTTAGGGTGT 57.736 50.000 0.00 0.00 0.00 4.16
849 1109 1.837439 TGCTCATAGGGTTAGGGTGTG 59.163 52.381 0.00 0.00 0.00 3.82
850 1110 1.475213 GCTCATAGGGTTAGGGTGTGC 60.475 57.143 0.00 0.00 0.00 4.57
851 1111 0.828022 TCATAGGGTTAGGGTGTGCG 59.172 55.000 0.00 0.00 0.00 5.34
852 1112 0.539986 CATAGGGTTAGGGTGTGCGT 59.460 55.000 0.00 0.00 0.00 5.24
853 1113 0.539986 ATAGGGTTAGGGTGTGCGTG 59.460 55.000 0.00 0.00 0.00 5.34
854 1114 0.832983 TAGGGTTAGGGTGTGCGTGT 60.833 55.000 0.00 0.00 0.00 4.49
855 1115 0.832983 AGGGTTAGGGTGTGCGTGTA 60.833 55.000 0.00 0.00 0.00 2.90
856 1116 0.251073 GGGTTAGGGTGTGCGTGTAT 59.749 55.000 0.00 0.00 0.00 2.29
857 1117 1.365699 GGTTAGGGTGTGCGTGTATG 58.634 55.000 0.00 0.00 0.00 2.39
858 1118 0.725117 GTTAGGGTGTGCGTGTATGC 59.275 55.000 0.00 0.00 0.00 3.14
859 1119 0.738063 TTAGGGTGTGCGTGTATGCG 60.738 55.000 0.00 0.00 37.81 4.73
860 1120 1.879737 TAGGGTGTGCGTGTATGCGT 61.880 55.000 0.00 0.00 37.81 5.24
861 1121 2.322081 GGGTGTGCGTGTATGCGTT 61.322 57.895 0.00 0.00 37.81 4.84
862 1122 1.572447 GGTGTGCGTGTATGCGTTT 59.428 52.632 0.00 0.00 37.81 3.60
863 1123 0.791422 GGTGTGCGTGTATGCGTTTA 59.209 50.000 0.00 0.00 37.81 2.01
864 1124 1.395608 GGTGTGCGTGTATGCGTTTAT 59.604 47.619 0.00 0.00 37.81 1.40
865 1125 2.604011 GGTGTGCGTGTATGCGTTTATA 59.396 45.455 0.00 0.00 37.81 0.98
866 1126 3.302221 GGTGTGCGTGTATGCGTTTATAG 60.302 47.826 0.00 0.00 37.81 1.31
867 1127 2.861335 TGTGCGTGTATGCGTTTATAGG 59.139 45.455 0.00 0.00 37.81 2.57
868 1128 2.220133 GTGCGTGTATGCGTTTATAGGG 59.780 50.000 0.00 0.00 37.81 3.53
869 1129 1.796459 GCGTGTATGCGTTTATAGGGG 59.204 52.381 0.00 0.00 0.00 4.79
870 1130 2.804212 GCGTGTATGCGTTTATAGGGGT 60.804 50.000 0.00 0.00 0.00 4.95
871 1131 2.798283 CGTGTATGCGTTTATAGGGGTG 59.202 50.000 0.00 0.00 0.00 4.61
872 1132 3.491276 CGTGTATGCGTTTATAGGGGTGA 60.491 47.826 0.00 0.00 0.00 4.02
873 1133 4.056050 GTGTATGCGTTTATAGGGGTGAG 58.944 47.826 0.00 0.00 0.00 3.51
874 1134 3.707611 TGTATGCGTTTATAGGGGTGAGT 59.292 43.478 0.00 0.00 0.00 3.41
875 1135 2.684001 TGCGTTTATAGGGGTGAGTG 57.316 50.000 0.00 0.00 0.00 3.51
876 1136 1.903860 TGCGTTTATAGGGGTGAGTGT 59.096 47.619 0.00 0.00 0.00 3.55
877 1137 3.098377 TGCGTTTATAGGGGTGAGTGTA 58.902 45.455 0.00 0.00 0.00 2.90
878 1138 3.707611 TGCGTTTATAGGGGTGAGTGTAT 59.292 43.478 0.00 0.00 0.00 2.29
879 1139 4.056050 GCGTTTATAGGGGTGAGTGTATG 58.944 47.826 0.00 0.00 0.00 2.39
880 1140 4.056050 CGTTTATAGGGGTGAGTGTATGC 58.944 47.826 0.00 0.00 0.00 3.14
881 1141 4.056050 GTTTATAGGGGTGAGTGTATGCG 58.944 47.826 0.00 0.00 0.00 4.73
882 1142 1.789523 ATAGGGGTGAGTGTATGCGT 58.210 50.000 0.00 0.00 0.00 5.24
883 1143 0.821517 TAGGGGTGAGTGTATGCGTG 59.178 55.000 0.00 0.00 0.00 5.34
884 1144 1.192146 AGGGGTGAGTGTATGCGTGT 61.192 55.000 0.00 0.00 0.00 4.49
885 1145 1.019278 GGGGTGAGTGTATGCGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
886 1146 0.320421 GGGTGAGTGTATGCGTGTGT 60.320 55.000 0.00 0.00 0.00 3.72
887 1147 1.067425 GGGTGAGTGTATGCGTGTGTA 60.067 52.381 0.00 0.00 0.00 2.90
888 1148 2.418197 GGGTGAGTGTATGCGTGTGTAT 60.418 50.000 0.00 0.00 0.00 2.29
889 1149 3.181484 GGGTGAGTGTATGCGTGTGTATA 60.181 47.826 0.00 0.00 0.00 1.47
890 1150 4.500887 GGGTGAGTGTATGCGTGTGTATAT 60.501 45.833 0.00 0.00 0.00 0.86
891 1151 4.444388 GGTGAGTGTATGCGTGTGTATATG 59.556 45.833 0.00 0.00 0.00 1.78
892 1152 5.278604 GTGAGTGTATGCGTGTGTATATGA 58.721 41.667 0.00 0.00 0.00 2.15
893 1153 5.399596 GTGAGTGTATGCGTGTGTATATGAG 59.600 44.000 0.00 0.00 0.00 2.90
894 1154 4.299155 AGTGTATGCGTGTGTATATGAGC 58.701 43.478 0.00 0.00 0.00 4.26
895 1155 3.119628 GTGTATGCGTGTGTATATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
896 1156 1.139989 ATGCGTGTGTATATGAGCGC 58.860 50.000 0.00 0.00 44.29 5.92
897 1157 0.102300 TGCGTGTGTATATGAGCGCT 59.898 50.000 11.27 11.27 44.34 5.92
898 1158 1.209128 GCGTGTGTATATGAGCGCTT 58.791 50.000 13.26 0.00 41.37 4.68
899 1159 1.071239 GCGTGTGTATATGAGCGCTTG 60.071 52.381 13.26 0.00 41.37 4.01
900 1160 1.071239 CGTGTGTATATGAGCGCTTGC 60.071 52.381 13.26 0.00 39.58 4.01
901 1161 1.071239 GTGTGTATATGAGCGCTTGCG 60.071 52.381 13.26 10.90 45.69 4.85
902 1162 1.209128 GTGTATATGAGCGCTTGCGT 58.791 50.000 13.26 3.24 45.69 5.24
903 1163 1.190323 GTGTATATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
904 1164 1.202359 TGTATATGAGCGCTTGCGTCA 60.202 47.619 13.26 16.86 45.69 4.35
905 1165 1.190323 GTATATGAGCGCTTGCGTCAC 59.810 52.381 13.26 2.05 45.69 3.67
906 1166 0.179100 ATATGAGCGCTTGCGTCACT 60.179 50.000 13.26 5.17 45.69 3.41
907 1167 1.078201 TATGAGCGCTTGCGTCACTG 61.078 55.000 13.26 0.00 45.69 3.66
908 1168 3.038417 GAGCGCTTGCGTCACTGT 61.038 61.111 13.26 0.00 45.69 3.55
909 1169 3.287121 GAGCGCTTGCGTCACTGTG 62.287 63.158 13.26 0.17 45.69 3.66
910 1170 3.640000 GCGCTTGCGTCACTGTGT 61.640 61.111 16.38 0.00 0.00 3.72
911 1171 3.014036 CGCTTGCGTCACTGTGTT 58.986 55.556 7.79 0.00 0.00 3.32
912 1172 1.827315 GCGCTTGCGTCACTGTGTTA 61.827 55.000 16.38 0.00 0.00 2.41
913 1173 0.579630 CGCTTGCGTCACTGTGTTAA 59.420 50.000 7.79 0.00 0.00 2.01
914 1174 1.397190 CGCTTGCGTCACTGTGTTAAG 60.397 52.381 7.79 9.06 0.00 1.85
915 1175 1.864711 GCTTGCGTCACTGTGTTAAGA 59.135 47.619 7.79 0.00 0.00 2.10
916 1176 2.286833 GCTTGCGTCACTGTGTTAAGAA 59.713 45.455 7.79 0.00 0.00 2.52
940 1200 7.975866 AAATGACGAATTGAATGTAATCAGC 57.024 32.000 0.00 0.00 0.00 4.26
953 1711 4.783621 TCAGCGCTCCCCACATGC 62.784 66.667 7.13 0.00 0.00 4.06
962 1720 1.881973 CTCCCCACATGCCAAATATCG 59.118 52.381 0.00 0.00 0.00 2.92
1050 1812 0.179018 GTCAGCCAAGTTGACACCCT 60.179 55.000 3.87 0.00 42.03 4.34
1221 2021 0.036875 GGAGGAAACAGTCACCCCAG 59.963 60.000 0.00 0.00 0.00 4.45
1270 2125 0.032403 CACTCCGGTCGTGTGGTTAA 59.968 55.000 15.44 0.00 0.00 2.01
1271 2126 0.752054 ACTCCGGTCGTGTGGTTAAA 59.248 50.000 0.00 0.00 0.00 1.52
1272 2127 1.269936 ACTCCGGTCGTGTGGTTAAAG 60.270 52.381 0.00 0.00 0.00 1.85
1273 2128 1.000060 CTCCGGTCGTGTGGTTAAAGA 60.000 52.381 0.00 0.00 0.00 2.52
1274 2129 1.619827 TCCGGTCGTGTGGTTAAAGAT 59.380 47.619 0.00 0.00 0.00 2.40
1276 2131 1.127951 CGGTCGTGTGGTTAAAGATGC 59.872 52.381 0.00 0.00 0.00 3.91
1277 2132 1.467342 GGTCGTGTGGTTAAAGATGCC 59.533 52.381 0.00 0.00 0.00 4.40
1279 2134 0.808755 CGTGTGGTTAAAGATGCCCC 59.191 55.000 0.00 0.00 0.00 5.80
1282 2151 0.323087 GTGGTTAAAGATGCCCCGGT 60.323 55.000 0.00 0.00 0.00 5.28
1347 2221 4.380444 CCACAAGTGGTCAATTATTTCCCG 60.380 45.833 11.08 0.00 45.53 5.14
1461 2342 3.744942 CCATCTTCTCTTCACACACACAG 59.255 47.826 0.00 0.00 0.00 3.66
1509 2432 4.137543 GAGCAAACAAGAAGAGGAGGAAA 58.862 43.478 0.00 0.00 0.00 3.13
1551 2496 1.153469 GGAGCACTCCTACAGCAGC 60.153 63.158 9.54 0.00 46.16 5.25
1552 2497 1.593787 GAGCACTCCTACAGCAGCA 59.406 57.895 0.00 0.00 0.00 4.41
1553 2498 0.036952 GAGCACTCCTACAGCAGCAA 60.037 55.000 0.00 0.00 0.00 3.91
1554 2499 0.321122 AGCACTCCTACAGCAGCAAC 60.321 55.000 0.00 0.00 0.00 4.17
1555 2500 0.603707 GCACTCCTACAGCAGCAACA 60.604 55.000 0.00 0.00 0.00 3.33
1556 2501 1.436600 CACTCCTACAGCAGCAACAG 58.563 55.000 0.00 0.00 0.00 3.16
1557 2502 0.321122 ACTCCTACAGCAGCAACAGC 60.321 55.000 0.00 0.00 0.00 4.40
1558 2503 1.357258 CTCCTACAGCAGCAACAGCG 61.357 60.000 0.00 0.00 37.01 5.18
1559 2504 2.393768 CCTACAGCAGCAACAGCGG 61.394 63.158 0.00 0.00 37.01 5.52
1564 2509 3.740397 GCAGCAACAGCGGCATCA 61.740 61.111 1.45 0.00 46.58 3.07
1565 2510 2.177531 CAGCAACAGCGGCATCAC 59.822 61.111 1.45 0.00 0.00 3.06
1566 2511 2.033141 AGCAACAGCGGCATCACT 59.967 55.556 1.45 0.00 0.00 3.41
1567 2512 1.020861 CAGCAACAGCGGCATCACTA 61.021 55.000 1.45 0.00 0.00 2.74
1568 2513 1.021390 AGCAACAGCGGCATCACTAC 61.021 55.000 1.45 0.00 0.00 2.73
1579 2524 1.556564 CATCACTACCAACTACGGCG 58.443 55.000 4.80 4.80 0.00 6.46
1774 2781 6.651225 AGTGTCTGTCAGATTAGCTTTTTACC 59.349 38.462 5.68 0.00 0.00 2.85
1812 2828 5.269189 TGGTTTTTCTTCCCAAGTCTTCTT 58.731 37.500 0.00 0.00 0.00 2.52
1886 2928 1.425412 ATTTCGTGTGCGGTGTACTC 58.575 50.000 0.00 0.00 38.89 2.59
2119 3225 3.081061 AGTGTTGTTGTGCAAGAAGTCA 58.919 40.909 0.00 0.00 37.83 3.41
2126 3232 5.182487 TGTTGTGCAAGAAGTCAGACTTAA 58.818 37.500 16.14 2.21 38.80 1.85
2144 3250 7.060633 CAGACTTAATCGTTGGTGTTAATTTGC 59.939 37.037 0.00 0.00 0.00 3.68
2162 3268 2.031919 ACGAGGATTTGCGGCACA 59.968 55.556 0.05 0.00 0.00 4.57
2166 3272 0.527565 GAGGATTTGCGGCACACAAT 59.472 50.000 0.05 0.00 27.49 2.71
2301 3538 0.870393 TGTGTCTACGACCGACAGAC 59.130 55.000 16.14 16.14 41.62 3.51
2455 3963 1.447838 GTGAGGCAAATCGAGCGGA 60.448 57.895 0.00 0.00 0.00 5.54
2761 4271 8.809468 ATATGATATAACCTAGCTTCGACTCA 57.191 34.615 0.00 0.00 0.00 3.41
2781 4291 5.186021 ACTCATGAGTTTACTACAGGGAGTG 59.814 44.000 22.89 0.00 38.83 3.51
2974 4496 0.693049 GGGAGCTTTGGAGGAGTTCA 59.307 55.000 0.00 0.00 0.00 3.18
3021 4543 2.545952 GCATCGGATCATACCACGAACT 60.546 50.000 0.00 0.00 38.94 3.01
3216 4740 0.663153 GACCGCAACAAGCTTCTTGT 59.337 50.000 14.79 6.40 42.61 3.16
3217 4741 1.065551 GACCGCAACAAGCTTCTTGTT 59.934 47.619 16.54 16.54 42.75 2.83
3218 4742 1.476488 ACCGCAACAAGCTTCTTGTTT 59.524 42.857 18.88 5.62 40.30 2.83
3219 4743 2.094234 ACCGCAACAAGCTTCTTGTTTT 60.094 40.909 18.88 1.00 40.30 2.43
3220 4744 2.929398 CCGCAACAAGCTTCTTGTTTTT 59.071 40.909 18.88 0.36 40.30 1.94
3241 4765 2.149973 TTTCGAGTAGTAGGGGGTCC 57.850 55.000 0.00 0.00 0.00 4.46
3242 4766 0.107017 TTCGAGTAGTAGGGGGTCCG 60.107 60.000 0.00 0.00 38.33 4.79
3243 4767 1.527844 CGAGTAGTAGGGGGTCCGG 60.528 68.421 0.00 0.00 38.33 5.14
3244 4768 1.152589 GAGTAGTAGGGGGTCCGGG 60.153 68.421 0.00 0.00 38.33 5.73
3245 4769 1.938062 AGTAGTAGGGGGTCCGGGT 60.938 63.158 0.00 0.00 38.33 5.28
3246 4770 1.759692 GTAGTAGGGGGTCCGGGTG 60.760 68.421 0.00 0.00 38.33 4.61
3247 4771 3.012775 TAGTAGGGGGTCCGGGTGG 62.013 68.421 0.00 0.00 38.33 4.61
3255 4779 3.572222 GTCCGGGTGGGGGAACAA 61.572 66.667 0.00 0.00 34.80 2.83
3256 4780 3.572222 TCCGGGTGGGGGAACAAC 61.572 66.667 0.00 0.00 36.01 3.32
3257 4781 3.576259 CCGGGTGGGGGAACAACT 61.576 66.667 0.00 0.00 0.00 3.16
3258 4782 2.033602 CGGGTGGGGGAACAACTC 59.966 66.667 0.00 0.00 0.00 3.01
3259 4783 2.439245 GGGTGGGGGAACAACTCC 59.561 66.667 0.00 0.00 44.54 3.85
3266 4790 2.671963 GGAACAACTCCCCACCGC 60.672 66.667 0.00 0.00 38.44 5.68
3267 4791 2.430367 GAACAACTCCCCACCGCT 59.570 61.111 0.00 0.00 0.00 5.52
3268 4792 1.228154 GAACAACTCCCCACCGCTT 60.228 57.895 0.00 0.00 0.00 4.68
3269 4793 1.515521 GAACAACTCCCCACCGCTTG 61.516 60.000 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.911769 AAGGACATGGAAGATGGCGA 59.088 50.000 0.00 0.00 0.00 5.54
18 19 1.206371 GTTTGTCCTAGCCGCTAAGGA 59.794 52.381 12.14 12.14 45.00 3.36
24 25 1.732809 GAAAGAGTTTGTCCTAGCCGC 59.267 52.381 0.00 0.00 0.00 6.53
25 26 3.320673 AGAAAGAGTTTGTCCTAGCCG 57.679 47.619 0.00 0.00 0.00 5.52
33 34 8.753497 AGATAAACCTGAAAGAAAGAGTTTGT 57.247 30.769 0.00 0.00 34.07 2.83
65 66 6.894103 AGGCAAAGAGAAAGTGAATCCATAAT 59.106 34.615 0.00 0.00 0.00 1.28
76 77 0.957362 GCAGCAGGCAAAGAGAAAGT 59.043 50.000 0.00 0.00 43.97 2.66
92 93 1.845809 GATATTGGCCGCCGAAGCAG 61.846 60.000 2.61 0.00 39.83 4.24
93 94 1.891919 GATATTGGCCGCCGAAGCA 60.892 57.895 2.61 0.00 39.83 3.91
95 96 2.317609 CCGATATTGGCCGCCGAAG 61.318 63.158 2.61 0.00 0.00 3.79
113 129 0.804989 ACTAGCCAAAGCGAATGCAC 59.195 50.000 0.00 0.00 46.67 4.57
124 140 9.223099 GAAAACATAACCTAAACTACTAGCCAA 57.777 33.333 0.00 0.00 0.00 4.52
136 152 9.720769 CTAGAAGGACAAGAAAACATAACCTAA 57.279 33.333 0.00 0.00 0.00 2.69
151 167 1.550130 CCCCGCACCTAGAAGGACAA 61.550 60.000 0.00 0.00 37.67 3.18
159 175 4.609018 CATCCGCCCCGCACCTAG 62.609 72.222 0.00 0.00 0.00 3.02
192 208 6.346678 CCCGAAAGTAAAACTCGAAGAAGAAG 60.347 42.308 0.00 0.00 34.09 2.85
193 209 5.464389 CCCGAAAGTAAAACTCGAAGAAGAA 59.536 40.000 0.00 0.00 34.09 2.52
194 210 4.986659 CCCGAAAGTAAAACTCGAAGAAGA 59.013 41.667 0.00 0.00 34.09 2.87
195 211 4.377124 GCCCGAAAGTAAAACTCGAAGAAG 60.377 45.833 0.00 0.00 34.09 2.85
196 212 3.495753 GCCCGAAAGTAAAACTCGAAGAA 59.504 43.478 0.00 0.00 34.09 2.52
197 213 3.062042 GCCCGAAAGTAAAACTCGAAGA 58.938 45.455 0.00 0.00 34.52 2.87
198 214 3.064931 AGCCCGAAAGTAAAACTCGAAG 58.935 45.455 0.00 0.00 34.52 3.79
199 215 3.062042 GAGCCCGAAAGTAAAACTCGAA 58.938 45.455 0.00 0.00 34.52 3.71
200 216 2.611224 GGAGCCCGAAAGTAAAACTCGA 60.611 50.000 0.00 0.00 34.52 4.04
201 217 1.730612 GGAGCCCGAAAGTAAAACTCG 59.269 52.381 0.00 0.00 0.00 4.18
217 233 0.030908 AATTCGAGACGGATCGGAGC 59.969 55.000 7.35 0.00 42.93 4.70
225 241 1.200483 CATGGACGAATTCGAGACGG 58.800 55.000 33.05 15.40 43.02 4.79
227 243 2.876091 TCACATGGACGAATTCGAGAC 58.124 47.619 33.05 21.04 43.02 3.36
240 256 3.540617 TCCATCGGTTATGTTCACATGG 58.459 45.455 2.50 0.00 37.15 3.66
242 258 3.118261 AGCTCCATCGGTTATGTTCACAT 60.118 43.478 0.00 0.00 40.22 3.21
244 260 2.906354 AGCTCCATCGGTTATGTTCAC 58.094 47.619 0.00 0.00 33.34 3.18
260 276 1.587034 CGGGAATTTACGTCGAAGCTC 59.413 52.381 0.00 0.00 0.00 4.09
278 294 2.730672 CGTTTCAGCGAGAAGGCGG 61.731 63.158 0.00 0.00 37.57 6.13
279 295 1.733041 TCGTTTCAGCGAGAAGGCG 60.733 57.895 11.53 11.53 37.57 5.52
288 304 0.706729 CGTAACCTCGTCGTTTCAGC 59.293 55.000 0.00 0.00 0.00 4.26
289 305 1.334054 CCGTAACCTCGTCGTTTCAG 58.666 55.000 0.00 0.00 0.00 3.02
300 316 2.163010 CACACACGAGATACCGTAACCT 59.837 50.000 0.00 0.00 41.29 3.50
310 326 2.530177 CATCTTACGCACACACGAGAT 58.470 47.619 0.00 0.00 36.70 2.75
314 330 1.419922 GCCATCTTACGCACACACG 59.580 57.895 0.00 0.00 39.50 4.49
320 336 1.933181 CAAATCTCGCCATCTTACGCA 59.067 47.619 0.00 0.00 0.00 5.24
322 338 3.363378 GCATCAAATCTCGCCATCTTACG 60.363 47.826 0.00 0.00 0.00 3.18
325 341 1.952296 GGCATCAAATCTCGCCATCTT 59.048 47.619 0.00 0.00 44.25 2.40
344 360 5.704515 CCTTGAATATATCTGAAGCACCTGG 59.295 44.000 0.00 0.00 0.00 4.45
372 388 3.119814 TCGAGCTGTAGTCATCAGTGTTC 60.120 47.826 0.00 0.00 35.60 3.18
375 391 3.065925 TCATCGAGCTGTAGTCATCAGTG 59.934 47.826 0.00 0.00 35.60 3.66
376 392 3.282885 TCATCGAGCTGTAGTCATCAGT 58.717 45.455 0.00 0.00 35.60 3.41
377 393 3.978718 TCATCGAGCTGTAGTCATCAG 57.021 47.619 0.00 0.00 36.18 2.90
378 394 3.885297 TCATCATCGAGCTGTAGTCATCA 59.115 43.478 0.00 0.00 0.00 3.07
381 397 3.005155 CCATCATCATCGAGCTGTAGTCA 59.995 47.826 0.00 0.00 0.00 3.41
387 403 1.343789 AGGACCATCATCATCGAGCTG 59.656 52.381 0.00 0.00 0.00 4.24
388 404 1.714541 AGGACCATCATCATCGAGCT 58.285 50.000 0.00 0.00 0.00 4.09
422 438 2.688507 GATGACAGCCGAAAGTCTTCA 58.311 47.619 0.00 0.00 38.25 3.02
426 442 0.992802 GTCGATGACAGCCGAAAGTC 59.007 55.000 4.58 0.00 36.50 3.01
435 451 1.081892 CTTGGCCTTGTCGATGACAG 58.918 55.000 3.32 0.00 43.69 3.51
453 469 4.785301 ACATGCCATTGTCATAGCTAACT 58.215 39.130 0.00 0.00 0.00 2.24
456 472 3.392882 CGACATGCCATTGTCATAGCTA 58.607 45.455 0.00 0.00 45.08 3.32
459 475 1.265095 GCCGACATGCCATTGTCATAG 59.735 52.381 10.85 2.33 45.08 2.23
470 486 3.667429 GAACAAGCCGCCGACATGC 62.667 63.158 0.00 0.00 0.00 4.06
478 494 1.444119 TTGGTGTCAGAACAAGCCGC 61.444 55.000 0.00 0.00 37.08 6.53
495 511 4.495422 AGACTAGCAAACGACCACTATTG 58.505 43.478 0.00 0.00 0.00 1.90
497 513 4.338682 CCTAGACTAGCAAACGACCACTAT 59.661 45.833 3.76 0.00 0.00 2.12
509 525 3.517612 AGTCAAAACCCCTAGACTAGCA 58.482 45.455 3.76 0.00 39.40 3.49
510 526 4.554960 AAGTCAAAACCCCTAGACTAGC 57.445 45.455 3.76 0.00 40.22 3.42
511 527 9.516546 AAAATTAAGTCAAAACCCCTAGACTAG 57.483 33.333 2.18 2.18 40.22 2.57
512 528 9.871175 AAAAATTAAGTCAAAACCCCTAGACTA 57.129 29.630 0.00 0.00 40.22 2.59
513 529 8.638873 CAAAAATTAAGTCAAAACCCCTAGACT 58.361 33.333 0.00 0.00 42.72 3.24
514 530 8.418662 ACAAAAATTAAGTCAAAACCCCTAGAC 58.581 33.333 0.00 0.00 0.00 2.59
515 531 8.541899 ACAAAAATTAAGTCAAAACCCCTAGA 57.458 30.769 0.00 0.00 0.00 2.43
516 532 9.040939 CAACAAAAATTAAGTCAAAACCCCTAG 57.959 33.333 0.00 0.00 0.00 3.02
517 533 8.541234 ACAACAAAAATTAAGTCAAAACCCCTA 58.459 29.630 0.00 0.00 0.00 3.53
520 536 6.964370 GCACAACAAAAATTAAGTCAAAACCC 59.036 34.615 0.00 0.00 0.00 4.11
521 537 7.747888 AGCACAACAAAAATTAAGTCAAAACC 58.252 30.769 0.00 0.00 0.00 3.27
522 538 8.439286 TGAGCACAACAAAAATTAAGTCAAAAC 58.561 29.630 0.00 0.00 0.00 2.43
526 542 7.487484 TGATGAGCACAACAAAAATTAAGTCA 58.513 30.769 0.00 0.00 0.00 3.41
527 543 7.928908 TGATGAGCACAACAAAAATTAAGTC 57.071 32.000 0.00 0.00 0.00 3.01
528 544 7.981225 AGTTGATGAGCACAACAAAAATTAAGT 59.019 29.630 8.32 0.00 46.58 2.24
529 545 8.356533 AGTTGATGAGCACAACAAAAATTAAG 57.643 30.769 8.32 0.00 46.58 1.85
537 555 5.826601 TGTAAAGTTGATGAGCACAACAA 57.173 34.783 2.79 2.79 46.58 2.83
539 557 5.565259 CGAATGTAAAGTTGATGAGCACAAC 59.435 40.000 0.00 0.00 45.15 3.32
545 563 7.545362 AGGATTCGAATGTAAAGTTGATGAG 57.455 36.000 16.96 0.00 0.00 2.90
573 591 6.921857 GGCTACTCTCGCACAGTAATATTAAA 59.078 38.462 0.00 0.00 0.00 1.52
574 592 6.264744 AGGCTACTCTCGCACAGTAATATTAA 59.735 38.462 0.00 0.00 0.00 1.40
575 593 5.768662 AGGCTACTCTCGCACAGTAATATTA 59.231 40.000 0.00 0.00 0.00 0.98
577 595 4.145807 AGGCTACTCTCGCACAGTAATAT 58.854 43.478 0.00 0.00 0.00 1.28
579 597 2.359531 GAGGCTACTCTCGCACAGTAAT 59.640 50.000 0.00 0.00 40.68 1.89
582 600 1.316706 GGAGGCTACTCTCGCACAGT 61.317 60.000 0.00 0.00 43.46 3.55
583 601 1.435515 GGAGGCTACTCTCGCACAG 59.564 63.158 0.00 0.00 43.46 3.66
584 602 2.407428 CGGAGGCTACTCTCGCACA 61.407 63.158 0.00 0.00 43.46 4.57
585 603 2.409651 CGGAGGCTACTCTCGCAC 59.590 66.667 0.00 0.00 43.46 5.34
588 606 0.952280 TATTGCGGAGGCTACTCTCG 59.048 55.000 0.00 0.00 43.46 4.04
589 607 2.745102 GTTATTGCGGAGGCTACTCTC 58.255 52.381 0.00 0.00 43.46 3.20
590 608 1.067212 CGTTATTGCGGAGGCTACTCT 59.933 52.381 0.00 0.00 43.46 3.24
591 609 1.066605 TCGTTATTGCGGAGGCTACTC 59.933 52.381 0.00 0.00 43.20 2.59
604 864 4.448395 TGGTTCGTCGTTCAATTCGTTATT 59.552 37.500 0.00 0.00 0.00 1.40
605 865 3.989167 TGGTTCGTCGTTCAATTCGTTAT 59.011 39.130 0.00 0.00 0.00 1.89
606 866 3.379240 TGGTTCGTCGTTCAATTCGTTA 58.621 40.909 0.00 0.00 0.00 3.18
607 867 2.203401 TGGTTCGTCGTTCAATTCGTT 58.797 42.857 0.00 0.00 0.00 3.85
608 868 1.855513 TGGTTCGTCGTTCAATTCGT 58.144 45.000 0.00 0.00 0.00 3.85
609 869 2.556806 GTTGGTTCGTCGTTCAATTCG 58.443 47.619 0.00 0.00 0.00 3.34
610 870 2.546789 AGGTTGGTTCGTCGTTCAATTC 59.453 45.455 0.00 0.00 0.00 2.17
611 871 2.289547 CAGGTTGGTTCGTCGTTCAATT 59.710 45.455 0.00 0.00 0.00 2.32
612 872 1.871039 CAGGTTGGTTCGTCGTTCAAT 59.129 47.619 0.00 0.00 0.00 2.57
613 873 1.292061 CAGGTTGGTTCGTCGTTCAA 58.708 50.000 0.00 0.00 0.00 2.69
614 874 0.176219 ACAGGTTGGTTCGTCGTTCA 59.824 50.000 0.00 0.00 0.00 3.18
615 875 0.580104 CACAGGTTGGTTCGTCGTTC 59.420 55.000 0.00 0.00 0.00 3.95
616 876 0.812412 CCACAGGTTGGTTCGTCGTT 60.812 55.000 0.00 0.00 41.10 3.85
617 877 1.227438 CCACAGGTTGGTTCGTCGT 60.227 57.895 0.00 0.00 41.10 4.34
618 878 3.637714 CCACAGGTTGGTTCGTCG 58.362 61.111 0.00 0.00 41.10 5.12
628 888 1.354368 CCTAACCATCCAACCACAGGT 59.646 52.381 0.00 0.00 37.65 4.00
629 889 1.340991 CCCTAACCATCCAACCACAGG 60.341 57.143 0.00 0.00 0.00 4.00
630 890 1.340991 CCCCTAACCATCCAACCACAG 60.341 57.143 0.00 0.00 0.00 3.66
631 891 0.701731 CCCCTAACCATCCAACCACA 59.298 55.000 0.00 0.00 0.00 4.17
632 892 0.996583 TCCCCTAACCATCCAACCAC 59.003 55.000 0.00 0.00 0.00 4.16
633 893 0.996583 GTCCCCTAACCATCCAACCA 59.003 55.000 0.00 0.00 0.00 3.67
634 894 1.064685 CAGTCCCCTAACCATCCAACC 60.065 57.143 0.00 0.00 0.00 3.77
635 895 1.633945 ACAGTCCCCTAACCATCCAAC 59.366 52.381 0.00 0.00 0.00 3.77
636 896 1.633432 CACAGTCCCCTAACCATCCAA 59.367 52.381 0.00 0.00 0.00 3.53
637 897 1.285280 CACAGTCCCCTAACCATCCA 58.715 55.000 0.00 0.00 0.00 3.41
638 898 0.546598 CCACAGTCCCCTAACCATCC 59.453 60.000 0.00 0.00 0.00 3.51
639 899 1.286248 ACCACAGTCCCCTAACCATC 58.714 55.000 0.00 0.00 0.00 3.51
640 900 2.653543 TACCACAGTCCCCTAACCAT 57.346 50.000 0.00 0.00 0.00 3.55
641 901 2.045326 AGATACCACAGTCCCCTAACCA 59.955 50.000 0.00 0.00 0.00 3.67
642 902 2.699321 GAGATACCACAGTCCCCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
643 903 2.699321 GGAGATACCACAGTCCCCTAAC 59.301 54.545 0.00 0.00 38.79 2.34
644 904 2.316677 TGGAGATACCACAGTCCCCTAA 59.683 50.000 0.00 0.00 44.64 2.69
645 905 1.934480 TGGAGATACCACAGTCCCCTA 59.066 52.381 0.00 0.00 44.64 3.53
646 906 0.716591 TGGAGATACCACAGTCCCCT 59.283 55.000 0.00 0.00 44.64 4.79
647 907 1.123928 CTGGAGATACCACAGTCCCC 58.876 60.000 0.00 0.00 44.64 4.81
648 908 1.867363 ACTGGAGATACCACAGTCCC 58.133 55.000 0.00 0.00 44.64 4.46
652 912 3.033909 TGATGGACTGGAGATACCACAG 58.966 50.000 0.00 0.00 44.64 3.66
653 913 3.033909 CTGATGGACTGGAGATACCACA 58.966 50.000 0.00 0.00 44.64 4.17
654 914 2.366916 CCTGATGGACTGGAGATACCAC 59.633 54.545 0.00 0.00 38.63 4.16
655 915 2.682594 CCTGATGGACTGGAGATACCA 58.317 52.381 0.00 0.00 40.32 3.25
656 916 1.974236 CCCTGATGGACTGGAGATACC 59.026 57.143 0.00 0.00 39.52 2.73
657 917 1.974236 CCCCTGATGGACTGGAGATAC 59.026 57.143 0.00 0.00 39.52 2.24
658 918 1.580658 ACCCCTGATGGACTGGAGATA 59.419 52.381 0.00 0.00 39.52 1.98
659 919 0.344790 ACCCCTGATGGACTGGAGAT 59.655 55.000 0.00 0.00 39.52 2.75
660 920 0.119155 AACCCCTGATGGACTGGAGA 59.881 55.000 0.00 0.00 39.52 3.71
661 921 0.543749 GAACCCCTGATGGACTGGAG 59.456 60.000 0.00 0.00 39.52 3.86
662 922 0.178876 TGAACCCCTGATGGACTGGA 60.179 55.000 0.00 0.00 39.52 3.86
663 923 0.921896 ATGAACCCCTGATGGACTGG 59.078 55.000 0.00 0.00 35.39 4.00
664 924 1.283029 ACATGAACCCCTGATGGACTG 59.717 52.381 0.00 0.00 35.39 3.51
665 925 1.561542 GACATGAACCCCTGATGGACT 59.438 52.381 0.00 0.00 35.39 3.85
666 926 1.408822 GGACATGAACCCCTGATGGAC 60.409 57.143 0.00 0.00 35.39 4.02
667 927 0.918983 GGACATGAACCCCTGATGGA 59.081 55.000 0.00 0.00 35.39 3.41
668 928 0.921896 AGGACATGAACCCCTGATGG 59.078 55.000 0.00 0.00 0.00 3.51
672 932 0.322816 CACCAGGACATGAACCCCTG 60.323 60.000 15.90 15.90 45.28 4.45
673 933 2.078452 CACCAGGACATGAACCCCT 58.922 57.895 0.00 0.00 0.00 4.79
674 934 1.678970 GCACCAGGACATGAACCCC 60.679 63.158 0.00 0.00 0.00 4.95
675 935 0.678048 GAGCACCAGGACATGAACCC 60.678 60.000 0.00 0.00 0.00 4.11
676 936 1.021390 CGAGCACCAGGACATGAACC 61.021 60.000 0.00 2.33 0.00 3.62
677 937 1.639298 GCGAGCACCAGGACATGAAC 61.639 60.000 0.00 0.00 0.00 3.18
678 938 1.375908 GCGAGCACCAGGACATGAA 60.376 57.895 0.00 0.00 0.00 2.57
679 939 1.902765 ATGCGAGCACCAGGACATGA 61.903 55.000 0.00 0.00 0.00 3.07
680 940 1.028330 AATGCGAGCACCAGGACATG 61.028 55.000 0.00 0.00 0.00 3.21
681 941 0.322816 AAATGCGAGCACCAGGACAT 60.323 50.000 0.00 0.00 0.00 3.06
682 942 0.323302 TAAATGCGAGCACCAGGACA 59.677 50.000 0.00 0.00 0.00 4.02
683 943 1.668419 ATAAATGCGAGCACCAGGAC 58.332 50.000 0.00 0.00 0.00 3.85
684 944 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
685 945 1.334869 GGAATAAATGCGAGCACCAGG 59.665 52.381 0.00 0.00 0.00 4.45
686 946 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
687 947 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
688 948 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
689 949 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
690 950 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
691 951 4.574599 AAATCCAGGAATAAATGCGAGC 57.425 40.909 0.00 0.00 0.00 5.03
692 952 8.352201 TGAAATAAATCCAGGAATAAATGCGAG 58.648 33.333 0.00 0.00 0.00 5.03
693 953 8.231692 TGAAATAAATCCAGGAATAAATGCGA 57.768 30.769 0.00 0.00 0.00 5.10
694 954 8.511465 CTGAAATAAATCCAGGAATAAATGCG 57.489 34.615 0.00 0.00 0.00 4.73
704 964 6.507023 CCGAAAATCCTGAAATAAATCCAGG 58.493 40.000 0.00 0.00 46.64 4.45
705 965 5.979517 GCCGAAAATCCTGAAATAAATCCAG 59.020 40.000 0.00 0.00 0.00 3.86
706 966 5.449862 CGCCGAAAATCCTGAAATAAATCCA 60.450 40.000 0.00 0.00 0.00 3.41
707 967 4.976116 CGCCGAAAATCCTGAAATAAATCC 59.024 41.667 0.00 0.00 0.00 3.01
708 968 5.816919 TCGCCGAAAATCCTGAAATAAATC 58.183 37.500 0.00 0.00 0.00 2.17
709 969 5.828299 TCGCCGAAAATCCTGAAATAAAT 57.172 34.783 0.00 0.00 0.00 1.40
710 970 5.577835 CATCGCCGAAAATCCTGAAATAAA 58.422 37.500 0.00 0.00 0.00 1.40
711 971 4.497340 GCATCGCCGAAAATCCTGAAATAA 60.497 41.667 0.00 0.00 0.00 1.40
712 972 3.003275 GCATCGCCGAAAATCCTGAAATA 59.997 43.478 0.00 0.00 0.00 1.40
713 973 2.223572 GCATCGCCGAAAATCCTGAAAT 60.224 45.455 0.00 0.00 0.00 2.17
714 974 1.132262 GCATCGCCGAAAATCCTGAAA 59.868 47.619 0.00 0.00 0.00 2.69
715 975 0.732571 GCATCGCCGAAAATCCTGAA 59.267 50.000 0.00 0.00 0.00 3.02
716 976 1.428370 CGCATCGCCGAAAATCCTGA 61.428 55.000 0.00 0.00 0.00 3.86
717 977 1.010797 CGCATCGCCGAAAATCCTG 60.011 57.895 0.00 0.00 0.00 3.86
718 978 3.409856 CGCATCGCCGAAAATCCT 58.590 55.556 0.00 0.00 0.00 3.24
729 989 1.135046 CTCCTACTGAATGCGCATCG 58.865 55.000 25.53 17.09 0.00 3.84
730 990 1.069204 TCCTCCTACTGAATGCGCATC 59.931 52.381 25.53 17.12 0.00 3.91
731 991 1.069823 CTCCTCCTACTGAATGCGCAT 59.930 52.381 19.28 19.28 0.00 4.73
732 992 0.461548 CTCCTCCTACTGAATGCGCA 59.538 55.000 14.96 14.96 0.00 6.09
733 993 0.747255 TCTCCTCCTACTGAATGCGC 59.253 55.000 0.00 0.00 0.00 6.09
734 994 1.268794 CGTCTCCTCCTACTGAATGCG 60.269 57.143 0.00 0.00 0.00 4.73
735 995 1.751924 ACGTCTCCTCCTACTGAATGC 59.248 52.381 0.00 0.00 0.00 3.56
736 996 3.181485 GGAACGTCTCCTCCTACTGAATG 60.181 52.174 8.87 0.00 41.61 2.67
737 997 3.025262 GGAACGTCTCCTCCTACTGAAT 58.975 50.000 8.87 0.00 41.61 2.57
738 998 2.444421 GGAACGTCTCCTCCTACTGAA 58.556 52.381 8.87 0.00 41.61 3.02
739 999 1.340795 GGGAACGTCTCCTCCTACTGA 60.341 57.143 13.94 0.00 44.68 3.41
740 1000 1.104630 GGGAACGTCTCCTCCTACTG 58.895 60.000 13.94 0.00 44.68 2.74
741 1001 3.592546 GGGAACGTCTCCTCCTACT 57.407 57.895 13.94 0.00 44.68 2.57
760 1020 0.248539 GTAGGCACCTCGTCATCGAC 60.249 60.000 0.00 0.00 41.35 4.20
761 1021 1.381928 GGTAGGCACCTCGTCATCGA 61.382 60.000 0.00 0.00 42.11 3.59
762 1022 1.065928 GGTAGGCACCTCGTCATCG 59.934 63.158 0.00 0.00 42.11 3.84
763 1023 1.065928 CGGTAGGCACCTCGTCATC 59.934 63.158 0.00 0.00 43.33 2.92
764 1024 1.681327 ACGGTAGGCACCTCGTCAT 60.681 57.895 0.00 0.00 43.33 3.06
765 1025 2.282674 ACGGTAGGCACCTCGTCA 60.283 61.111 0.00 0.00 43.33 4.35
766 1026 2.181021 CACGGTAGGCACCTCGTC 59.819 66.667 0.80 0.00 43.33 4.20
767 1027 2.282674 TCACGGTAGGCACCTCGT 60.283 61.111 0.00 0.00 43.33 4.18
768 1028 1.874345 AAGTCACGGTAGGCACCTCG 61.874 60.000 0.00 0.00 43.33 4.63
769 1029 0.320697 AAAGTCACGGTAGGCACCTC 59.679 55.000 0.00 0.00 43.33 3.85
770 1030 0.034896 CAAAGTCACGGTAGGCACCT 59.965 55.000 0.00 0.00 43.33 4.00
771 1031 0.250166 ACAAAGTCACGGTAGGCACC 60.250 55.000 0.00 0.00 41.93 5.01
772 1032 2.443887 TACAAAGTCACGGTAGGCAC 57.556 50.000 0.00 0.00 0.00 5.01
773 1033 3.472283 TTTACAAAGTCACGGTAGGCA 57.528 42.857 0.00 0.00 0.00 4.75
774 1034 5.049267 TGAAATTTACAAAGTCACGGTAGGC 60.049 40.000 0.00 0.00 0.00 3.93
775 1035 6.548441 TGAAATTTACAAAGTCACGGTAGG 57.452 37.500 0.00 0.00 0.00 3.18
776 1036 7.857569 TCTTGAAATTTACAAAGTCACGGTAG 58.142 34.615 0.00 0.00 0.00 3.18
777 1037 7.789273 TCTTGAAATTTACAAAGTCACGGTA 57.211 32.000 0.00 0.00 0.00 4.02
778 1038 6.687081 TCTTGAAATTTACAAAGTCACGGT 57.313 33.333 0.00 0.00 0.00 4.83
779 1039 7.359595 TCATCTTGAAATTTACAAAGTCACGG 58.640 34.615 0.00 0.00 0.00 4.94
780 1040 8.955061 ATCATCTTGAAATTTACAAAGTCACG 57.045 30.769 0.00 0.00 0.00 4.35
784 1044 9.807649 GGCATATCATCTTGAAATTTACAAAGT 57.192 29.630 0.00 0.00 0.00 2.66
785 1045 8.961092 CGGCATATCATCTTGAAATTTACAAAG 58.039 33.333 0.00 0.00 0.00 2.77
786 1046 7.920151 CCGGCATATCATCTTGAAATTTACAAA 59.080 33.333 0.00 0.00 0.00 2.83
787 1047 7.424803 CCGGCATATCATCTTGAAATTTACAA 58.575 34.615 0.00 0.00 0.00 2.41
788 1048 6.514870 GCCGGCATATCATCTTGAAATTTACA 60.515 38.462 24.80 0.00 0.00 2.41
789 1049 5.858581 GCCGGCATATCATCTTGAAATTTAC 59.141 40.000 24.80 0.00 0.00 2.01
790 1050 5.769662 AGCCGGCATATCATCTTGAAATTTA 59.230 36.000 31.54 0.00 0.00 1.40
791 1051 4.586001 AGCCGGCATATCATCTTGAAATTT 59.414 37.500 31.54 0.00 0.00 1.82
792 1052 4.147321 AGCCGGCATATCATCTTGAAATT 58.853 39.130 31.54 0.00 0.00 1.82
793 1053 3.755378 GAGCCGGCATATCATCTTGAAAT 59.245 43.478 31.54 0.06 0.00 2.17
794 1054 3.141398 GAGCCGGCATATCATCTTGAAA 58.859 45.455 31.54 0.00 0.00 2.69
795 1055 2.104622 TGAGCCGGCATATCATCTTGAA 59.895 45.455 31.54 0.00 0.00 2.69
796 1056 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
797 1057 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
798 1058 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
799 1059 1.346062 ACTGAGCCGGCATATCATCT 58.654 50.000 31.54 4.27 0.00 2.90
800 1060 2.175878 AACTGAGCCGGCATATCATC 57.824 50.000 31.54 16.99 0.00 2.92
801 1061 2.645838 AAACTGAGCCGGCATATCAT 57.354 45.000 31.54 6.18 0.00 2.45
802 1062 2.418368 AAAACTGAGCCGGCATATCA 57.582 45.000 31.54 22.44 0.00 2.15
803 1063 2.286418 CGAAAAACTGAGCCGGCATATC 60.286 50.000 31.54 18.63 0.00 1.63
804 1064 1.670811 CGAAAAACTGAGCCGGCATAT 59.329 47.619 31.54 8.11 0.00 1.78
805 1065 1.083489 CGAAAAACTGAGCCGGCATA 58.917 50.000 31.54 16.21 0.00 3.14
806 1066 1.586154 CCGAAAAACTGAGCCGGCAT 61.586 55.000 31.54 14.28 33.47 4.40
807 1067 2.258013 CCGAAAAACTGAGCCGGCA 61.258 57.895 31.54 7.98 33.47 5.69
808 1068 1.912371 CTCCGAAAAACTGAGCCGGC 61.912 60.000 21.89 21.89 39.96 6.13
809 1069 0.320421 TCTCCGAAAAACTGAGCCGG 60.320 55.000 0.00 0.00 41.36 6.13
810 1070 1.394917 CATCTCCGAAAAACTGAGCCG 59.605 52.381 0.00 0.00 31.43 5.52
811 1071 1.131315 GCATCTCCGAAAAACTGAGCC 59.869 52.381 0.00 0.00 31.43 4.70
812 1072 2.079925 AGCATCTCCGAAAAACTGAGC 58.920 47.619 0.00 0.00 31.43 4.26
813 1073 3.329386 TGAGCATCTCCGAAAAACTGAG 58.671 45.455 0.00 0.00 34.92 3.35
814 1074 3.401033 TGAGCATCTCCGAAAAACTGA 57.599 42.857 0.00 0.00 34.92 3.41
815 1075 4.272018 CCTATGAGCATCTCCGAAAAACTG 59.728 45.833 0.00 0.00 34.92 3.16
816 1076 4.446371 CCTATGAGCATCTCCGAAAAACT 58.554 43.478 0.00 0.00 34.92 2.66
817 1077 3.561725 CCCTATGAGCATCTCCGAAAAAC 59.438 47.826 0.00 0.00 34.92 2.43
818 1078 3.199946 ACCCTATGAGCATCTCCGAAAAA 59.800 43.478 0.00 0.00 34.92 1.94
819 1079 2.771943 ACCCTATGAGCATCTCCGAAAA 59.228 45.455 0.00 0.00 34.92 2.29
820 1080 2.398588 ACCCTATGAGCATCTCCGAAA 58.601 47.619 0.00 0.00 34.92 3.46
821 1081 2.088104 ACCCTATGAGCATCTCCGAA 57.912 50.000 0.00 0.00 34.92 4.30
822 1082 2.088104 AACCCTATGAGCATCTCCGA 57.912 50.000 0.00 0.00 34.92 4.55
823 1083 2.232452 CCTAACCCTATGAGCATCTCCG 59.768 54.545 0.00 0.00 34.92 4.63
824 1084 2.569404 CCCTAACCCTATGAGCATCTCC 59.431 54.545 0.00 0.00 34.92 3.71
825 1085 3.007398 CACCCTAACCCTATGAGCATCTC 59.993 52.174 0.00 0.00 34.92 2.75
826 1086 2.975489 CACCCTAACCCTATGAGCATCT 59.025 50.000 0.00 0.00 34.92 2.90
827 1087 2.706190 ACACCCTAACCCTATGAGCATC 59.294 50.000 0.00 0.00 0.00 3.91
828 1088 2.439507 CACACCCTAACCCTATGAGCAT 59.560 50.000 0.00 0.00 0.00 3.79
829 1089 1.837439 CACACCCTAACCCTATGAGCA 59.163 52.381 0.00 0.00 0.00 4.26
830 1090 1.475213 GCACACCCTAACCCTATGAGC 60.475 57.143 0.00 0.00 0.00 4.26
831 1091 1.202533 CGCACACCCTAACCCTATGAG 60.203 57.143 0.00 0.00 0.00 2.90
832 1092 0.828022 CGCACACCCTAACCCTATGA 59.172 55.000 0.00 0.00 0.00 2.15
833 1093 0.539986 ACGCACACCCTAACCCTATG 59.460 55.000 0.00 0.00 0.00 2.23
834 1094 0.539986 CACGCACACCCTAACCCTAT 59.460 55.000 0.00 0.00 0.00 2.57
835 1095 0.832983 ACACGCACACCCTAACCCTA 60.833 55.000 0.00 0.00 0.00 3.53
836 1096 0.832983 TACACGCACACCCTAACCCT 60.833 55.000 0.00 0.00 0.00 4.34
837 1097 0.251073 ATACACGCACACCCTAACCC 59.749 55.000 0.00 0.00 0.00 4.11
838 1098 1.365699 CATACACGCACACCCTAACC 58.634 55.000 0.00 0.00 0.00 2.85
839 1099 0.725117 GCATACACGCACACCCTAAC 59.275 55.000 0.00 0.00 0.00 2.34
840 1100 0.738063 CGCATACACGCACACCCTAA 60.738 55.000 0.00 0.00 0.00 2.69
841 1101 1.153726 CGCATACACGCACACCCTA 60.154 57.895 0.00 0.00 0.00 3.53
842 1102 2.434185 CGCATACACGCACACCCT 60.434 61.111 0.00 0.00 0.00 4.34
843 1103 1.847890 AAACGCATACACGCACACCC 61.848 55.000 0.00 0.00 36.19 4.61
844 1104 0.791422 TAAACGCATACACGCACACC 59.209 50.000 0.00 0.00 36.19 4.16
845 1105 2.798834 ATAAACGCATACACGCACAC 57.201 45.000 0.00 0.00 36.19 3.82
846 1106 2.861335 CCTATAAACGCATACACGCACA 59.139 45.455 0.00 0.00 36.19 4.57
847 1107 2.220133 CCCTATAAACGCATACACGCAC 59.780 50.000 0.00 0.00 36.19 5.34
848 1108 2.475818 CCCTATAAACGCATACACGCA 58.524 47.619 0.00 0.00 36.19 5.24
849 1109 1.796459 CCCCTATAAACGCATACACGC 59.204 52.381 0.00 0.00 36.19 5.34
850 1110 2.798283 CACCCCTATAAACGCATACACG 59.202 50.000 0.00 0.00 39.50 4.49
851 1111 4.056050 CTCACCCCTATAAACGCATACAC 58.944 47.826 0.00 0.00 0.00 2.90
852 1112 3.707611 ACTCACCCCTATAAACGCATACA 59.292 43.478 0.00 0.00 0.00 2.29
853 1113 4.056050 CACTCACCCCTATAAACGCATAC 58.944 47.826 0.00 0.00 0.00 2.39
854 1114 3.707611 ACACTCACCCCTATAAACGCATA 59.292 43.478 0.00 0.00 0.00 3.14
855 1115 2.504175 ACACTCACCCCTATAAACGCAT 59.496 45.455 0.00 0.00 0.00 4.73
856 1116 1.903860 ACACTCACCCCTATAAACGCA 59.096 47.619 0.00 0.00 0.00 5.24
857 1117 2.685850 ACACTCACCCCTATAAACGC 57.314 50.000 0.00 0.00 0.00 4.84
858 1118 4.056050 GCATACACTCACCCCTATAAACG 58.944 47.826 0.00 0.00 0.00 3.60
859 1119 4.056050 CGCATACACTCACCCCTATAAAC 58.944 47.826 0.00 0.00 0.00 2.01
860 1120 3.707611 ACGCATACACTCACCCCTATAAA 59.292 43.478 0.00 0.00 0.00 1.40
861 1121 3.069016 CACGCATACACTCACCCCTATAA 59.931 47.826 0.00 0.00 0.00 0.98
862 1122 2.626266 CACGCATACACTCACCCCTATA 59.374 50.000 0.00 0.00 0.00 1.31
863 1123 1.412710 CACGCATACACTCACCCCTAT 59.587 52.381 0.00 0.00 0.00 2.57
864 1124 0.821517 CACGCATACACTCACCCCTA 59.178 55.000 0.00 0.00 0.00 3.53
865 1125 1.192146 ACACGCATACACTCACCCCT 61.192 55.000 0.00 0.00 0.00 4.79
866 1126 1.019278 CACACGCATACACTCACCCC 61.019 60.000 0.00 0.00 0.00 4.95
867 1127 0.320421 ACACACGCATACACTCACCC 60.320 55.000 0.00 0.00 0.00 4.61
868 1128 2.357327 TACACACGCATACACTCACC 57.643 50.000 0.00 0.00 0.00 4.02
869 1129 5.278604 TCATATACACACGCATACACTCAC 58.721 41.667 0.00 0.00 0.00 3.51
870 1130 5.508200 TCATATACACACGCATACACTCA 57.492 39.130 0.00 0.00 0.00 3.41
871 1131 4.383052 GCTCATATACACACGCATACACTC 59.617 45.833 0.00 0.00 0.00 3.51
872 1132 4.299155 GCTCATATACACACGCATACACT 58.701 43.478 0.00 0.00 0.00 3.55
873 1133 3.119628 CGCTCATATACACACGCATACAC 59.880 47.826 0.00 0.00 0.00 2.90
874 1134 3.305110 CGCTCATATACACACGCATACA 58.695 45.455 0.00 0.00 0.00 2.29
875 1135 2.090658 GCGCTCATATACACACGCATAC 59.909 50.000 0.00 0.00 45.25 2.39
876 1136 2.324860 GCGCTCATATACACACGCATA 58.675 47.619 0.00 0.00 45.25 3.14
877 1137 1.139989 GCGCTCATATACACACGCAT 58.860 50.000 0.00 0.00 45.25 4.73
878 1138 2.588731 GCGCTCATATACACACGCA 58.411 52.632 0.00 0.00 45.25 5.24
879 1139 1.071239 CAAGCGCTCATATACACACGC 60.071 52.381 12.06 0.00 46.20 5.34
880 1140 1.071239 GCAAGCGCTCATATACACACG 60.071 52.381 12.06 0.00 34.30 4.49
881 1141 1.071239 CGCAAGCGCTCATATACACAC 60.071 52.381 12.06 0.00 35.30 3.82
882 1142 1.208259 CGCAAGCGCTCATATACACA 58.792 50.000 12.06 0.00 35.30 3.72
883 1143 1.190323 GACGCAAGCGCTCATATACAC 59.810 52.381 12.06 0.00 44.19 2.90
884 1144 1.202359 TGACGCAAGCGCTCATATACA 60.202 47.619 12.06 4.64 44.19 2.29
885 1145 1.190323 GTGACGCAAGCGCTCATATAC 59.810 52.381 12.06 2.39 44.19 1.47
886 1146 1.067060 AGTGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
887 1147 0.179100 AGTGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
888 1148 1.078201 CAGTGACGCAAGCGCTCATA 61.078 55.000 12.06 0.00 44.19 2.15
889 1149 2.047844 AGTGACGCAAGCGCTCAT 60.048 55.556 12.06 0.00 44.19 2.90
890 1150 3.037833 CAGTGACGCAAGCGCTCA 61.038 61.111 12.06 13.84 44.19 4.26
891 1151 3.038417 ACAGTGACGCAAGCGCTC 61.038 61.111 12.06 11.50 44.19 5.03
892 1152 3.341043 CACAGTGACGCAAGCGCT 61.341 61.111 15.09 2.64 44.19 5.92
893 1153 1.827315 TAACACAGTGACGCAAGCGC 61.827 55.000 15.09 0.00 44.19 5.92
894 1154 0.579630 TTAACACAGTGACGCAAGCG 59.420 50.000 13.50 13.50 46.03 4.68
895 1155 1.864711 TCTTAACACAGTGACGCAAGC 59.135 47.619 7.81 0.00 45.62 4.01
897 1157 4.948608 TTTTCTTAACACAGTGACGCAA 57.051 36.364 7.81 0.00 0.00 4.85
898 1158 4.572795 TCATTTTCTTAACACAGTGACGCA 59.427 37.500 7.81 0.00 0.00 5.24
899 1159 4.904154 GTCATTTTCTTAACACAGTGACGC 59.096 41.667 7.81 0.00 0.00 5.19
901 1161 6.281848 TCGTCATTTTCTTAACACAGTGAC 57.718 37.500 7.81 0.00 33.32 3.67
902 1162 6.912203 TTCGTCATTTTCTTAACACAGTGA 57.088 33.333 7.81 0.00 0.00 3.41
903 1163 7.855409 TCAATTCGTCATTTTCTTAACACAGTG 59.145 33.333 0.00 0.00 0.00 3.66
904 1164 7.925993 TCAATTCGTCATTTTCTTAACACAGT 58.074 30.769 0.00 0.00 0.00 3.55
905 1165 8.781067 TTCAATTCGTCATTTTCTTAACACAG 57.219 30.769 0.00 0.00 0.00 3.66
906 1166 9.179552 CATTCAATTCGTCATTTTCTTAACACA 57.820 29.630 0.00 0.00 0.00 3.72
907 1167 9.180678 ACATTCAATTCGTCATTTTCTTAACAC 57.819 29.630 0.00 0.00 0.00 3.32
913 1173 9.778993 CTGATTACATTCAATTCGTCATTTTCT 57.221 29.630 0.00 0.00 0.00 2.52
914 1174 8.526681 GCTGATTACATTCAATTCGTCATTTTC 58.473 33.333 0.00 0.00 0.00 2.29
915 1175 7.218773 CGCTGATTACATTCAATTCGTCATTTT 59.781 33.333 0.00 0.00 0.00 1.82
916 1176 6.688385 CGCTGATTACATTCAATTCGTCATTT 59.312 34.615 0.00 0.00 0.00 2.32
940 1200 0.751277 TATTTGGCATGTGGGGAGCG 60.751 55.000 0.00 0.00 0.00 5.03
953 1711 7.973388 TCTTCTTAATTTTGGCACGATATTTGG 59.027 33.333 0.00 0.00 0.00 3.28
962 1720 4.519540 TGCCTCTTCTTAATTTTGGCAC 57.480 40.909 0.00 0.00 43.09 5.01
1035 1797 0.960861 GCCTAGGGTGTCAACTTGGC 60.961 60.000 11.72 12.93 45.45 4.52
1050 1812 3.160748 TGGCGCTATGCTGGCCTA 61.161 61.111 7.64 0.00 46.97 3.93
1131 1924 3.112709 GCGACGGCTCACTGGTTC 61.113 66.667 0.00 0.00 35.83 3.62
1200 1998 1.752833 GGGTGACTGTTTCCTCCGT 59.247 57.895 3.11 0.00 0.00 4.69
1270 2125 1.077716 GCACTAACCGGGGCATCTT 60.078 57.895 6.32 0.00 0.00 2.40
1271 2126 2.590092 GCACTAACCGGGGCATCT 59.410 61.111 6.32 0.00 0.00 2.90
1272 2127 2.516225 GGCACTAACCGGGGCATC 60.516 66.667 6.32 0.00 0.00 3.91
1273 2128 2.612493 AAGGCACTAACCGGGGCAT 61.612 57.895 6.32 0.00 38.49 4.40
1274 2129 3.253838 AAGGCACTAACCGGGGCA 61.254 61.111 6.32 0.00 38.49 5.36
1276 2131 1.376812 GACAAGGCACTAACCGGGG 60.377 63.158 6.32 0.00 38.49 5.73
1277 2132 1.740296 CGACAAGGCACTAACCGGG 60.740 63.158 6.32 0.00 38.49 5.73
1279 2134 1.342082 CGTCGACAAGGCACTAACCG 61.342 60.000 17.16 0.00 38.49 4.44
1282 2151 1.364536 TGCGTCGACAAGGCACTAA 59.635 52.632 17.16 0.00 43.50 2.24
1347 2221 2.916716 CGCACATGTTAATTTGTCCTGC 59.083 45.455 0.00 0.00 0.00 4.85
1411 2292 5.297029 GGTGAAAAGAATTTATAGGCGAGCT 59.703 40.000 0.00 0.00 37.28 4.09
1461 2342 2.362397 TCTCCTTGTGAGTGAGTGTGTC 59.638 50.000 0.00 0.00 42.12 3.67
1509 2432 3.389329 TGGCTCTTCTTTCTCTGTTGTCT 59.611 43.478 0.00 0.00 0.00 3.41
1551 2496 0.673333 TGGTAGTGATGCCGCTGTTG 60.673 55.000 0.00 0.00 34.50 3.33
1552 2497 0.036164 TTGGTAGTGATGCCGCTGTT 59.964 50.000 0.00 0.00 34.50 3.16
1553 2498 0.673644 GTTGGTAGTGATGCCGCTGT 60.674 55.000 0.00 0.00 34.50 4.40
1554 2499 0.391661 AGTTGGTAGTGATGCCGCTG 60.392 55.000 0.00 0.00 34.50 5.18
1555 2500 1.134788 GTAGTTGGTAGTGATGCCGCT 60.135 52.381 0.00 0.00 36.94 5.52
1556 2501 1.287425 GTAGTTGGTAGTGATGCCGC 58.713 55.000 0.00 0.00 0.00 6.53
1557 2502 1.556564 CGTAGTTGGTAGTGATGCCG 58.443 55.000 0.00 0.00 0.00 5.69
1558 2503 1.935933 CCGTAGTTGGTAGTGATGCC 58.064 55.000 0.00 0.00 0.00 4.40
1559 2504 1.287425 GCCGTAGTTGGTAGTGATGC 58.713 55.000 0.00 0.00 0.00 3.91
1560 2505 1.556564 CGCCGTAGTTGGTAGTGATG 58.443 55.000 0.00 0.00 0.00 3.07
1561 2506 0.458669 CCGCCGTAGTTGGTAGTGAT 59.541 55.000 0.00 0.00 0.00 3.06
1562 2507 1.885157 CCGCCGTAGTTGGTAGTGA 59.115 57.895 0.00 0.00 0.00 3.41
1563 2508 1.808390 GCCGCCGTAGTTGGTAGTG 60.808 63.158 0.00 0.00 0.00 2.74
1564 2509 2.575461 GCCGCCGTAGTTGGTAGT 59.425 61.111 0.00 0.00 0.00 2.73
1565 2510 2.581409 CGCCGCCGTAGTTGGTAG 60.581 66.667 0.00 0.00 0.00 3.18
1566 2511 4.799824 GCGCCGCCGTAGTTGGTA 62.800 66.667 0.00 0.00 36.67 3.25
1579 2524 2.124942 CCTCCTCTCCTTTGCGCC 60.125 66.667 4.18 0.00 0.00 6.53
1707 2661 1.153706 GTTGTAGGCGCCGAAGCTA 60.154 57.895 23.20 4.16 36.60 3.32
1774 2781 5.940470 AGAAAAACCAGTATGAAGCTACCAG 59.060 40.000 0.00 0.00 39.69 4.00
1812 2828 2.496070 CAGAACTCTGTACAATCGGGGA 59.504 50.000 0.00 0.00 39.09 4.81
1834 2850 7.904558 ACCTCTCTATTCATCTGTACAATCA 57.095 36.000 0.00 0.00 0.00 2.57
1886 2928 1.878088 AGCACTGCATCACAAAGTGAG 59.122 47.619 3.30 0.27 46.04 3.51
1932 2994 0.941542 GTTCTACGCACAGCCAAACA 59.058 50.000 0.00 0.00 0.00 2.83
1933 2995 0.110823 CGTTCTACGCACAGCCAAAC 60.111 55.000 0.00 0.00 33.65 2.93
2073 3179 1.777272 AGGAGGGATAAACATCCTGGC 59.223 52.381 0.00 0.00 40.69 4.85
2075 3181 6.100424 ACTTCTAAGGAGGGATAAACATCCTG 59.900 42.308 0.00 0.00 41.36 3.86
2119 3225 7.081976 GCAAATTAACACCAACGATTAAGTCT 58.918 34.615 0.00 0.00 0.00 3.24
2126 3232 3.251245 TCGTGCAAATTAACACCAACGAT 59.749 39.130 0.00 0.00 33.09 3.73
2144 3250 2.324330 TGTGCCGCAAATCCTCGTG 61.324 57.895 0.00 0.00 0.00 4.35
2236 3473 6.017934 TCACTCGTACAGTCGTACTAAGTTTT 60.018 38.462 0.00 0.00 44.97 2.43
2244 3481 4.910746 TTAGTCACTCGTACAGTCGTAC 57.089 45.455 0.00 0.00 43.91 3.67
2245 3482 7.595311 TTTATTAGTCACTCGTACAGTCGTA 57.405 36.000 0.00 0.00 30.26 3.43
2246 3483 6.486253 TTTATTAGTCACTCGTACAGTCGT 57.514 37.500 0.00 0.00 30.26 4.34
2247 3484 7.786305 TTTTTATTAGTCACTCGTACAGTCG 57.214 36.000 0.00 0.00 30.26 4.18
2417 3925 4.084745 TCACGATTTGCGAAGTAGTTGAAC 60.085 41.667 0.00 0.00 44.57 3.18
2455 3963 2.599578 CCTGCCAAAGCCTGCTGT 60.600 61.111 0.00 0.00 38.69 4.40
2553 4063 2.236146 ACCACGATACAAGGCAATGAGA 59.764 45.455 0.00 0.00 0.00 3.27
2754 4264 4.398358 CCCTGTAGTAAACTCATGAGTCGA 59.602 45.833 28.01 16.14 41.58 4.20
2761 4271 3.838317 TGCACTCCCTGTAGTAAACTCAT 59.162 43.478 0.00 0.00 0.00 2.90
2781 4291 0.171455 TTTTTGGTGGTGTCGTGTGC 59.829 50.000 0.00 0.00 0.00 4.57
2871 4392 4.870123 TGCATTGAATGGCTAAAAGTGT 57.130 36.364 7.35 0.00 0.00 3.55
3021 4543 5.373812 AAAGGAGGAAGAGTGAAAAGTGA 57.626 39.130 0.00 0.00 0.00 3.41
3155 4678 3.456277 ACTCCAACCCAGATCACCTATTC 59.544 47.826 0.00 0.00 0.00 1.75
3220 4744 2.833943 GGACCCCCTACTACTCGAAAAA 59.166 50.000 0.00 0.00 0.00 1.94
3221 4745 2.460669 GGACCCCCTACTACTCGAAAA 58.539 52.381 0.00 0.00 0.00 2.29
3222 4746 1.683011 CGGACCCCCTACTACTCGAAA 60.683 57.143 0.00 0.00 0.00 3.46
3223 4747 0.107017 CGGACCCCCTACTACTCGAA 60.107 60.000 0.00 0.00 0.00 3.71
3224 4748 1.528824 CGGACCCCCTACTACTCGA 59.471 63.158 0.00 0.00 0.00 4.04
3225 4749 1.527844 CCGGACCCCCTACTACTCG 60.528 68.421 0.00 0.00 0.00 4.18
3226 4750 1.152589 CCCGGACCCCCTACTACTC 60.153 68.421 0.73 0.00 0.00 2.59
3227 4751 1.938062 ACCCGGACCCCCTACTACT 60.938 63.158 0.73 0.00 0.00 2.57
3228 4752 1.759692 CACCCGGACCCCCTACTAC 60.760 68.421 0.73 0.00 0.00 2.73
3229 4753 2.691732 CACCCGGACCCCCTACTA 59.308 66.667 0.73 0.00 0.00 1.82
3230 4754 4.410033 CCACCCGGACCCCCTACT 62.410 72.222 0.73 0.00 0.00 2.57
3238 4762 3.572222 TTGTTCCCCCACCCGGAC 61.572 66.667 0.73 0.00 0.00 4.79
3239 4763 3.572222 GTTGTTCCCCCACCCGGA 61.572 66.667 0.73 0.00 0.00 5.14
3240 4764 3.562732 GAGTTGTTCCCCCACCCGG 62.563 68.421 0.00 0.00 0.00 5.73
3241 4765 2.033602 GAGTTGTTCCCCCACCCG 59.966 66.667 0.00 0.00 0.00 5.28
3242 4766 2.439245 GGAGTTGTTCCCCCACCC 59.561 66.667 0.00 0.00 40.37 4.61
3249 4773 2.671963 GCGGTGGGGAGTTGTTCC 60.672 66.667 0.00 0.00 46.00 3.62
3250 4774 1.228154 AAGCGGTGGGGAGTTGTTC 60.228 57.895 0.00 0.00 0.00 3.18
3251 4775 1.528309 CAAGCGGTGGGGAGTTGTT 60.528 57.895 0.00 0.00 0.00 2.83
3252 4776 2.113139 CAAGCGGTGGGGAGTTGT 59.887 61.111 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.