Multiple sequence alignment - TraesCS1D01G288200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G288200 chr1D 100.000 2348 0 0 1 2348 386788106 386785759 0.000000e+00 4337.0
1 TraesCS1D01G288200 chr1D 81.784 1334 116 49 681 1928 386750481 386749189 0.000000e+00 1000.0
2 TraesCS1D01G288200 chr1D 98.175 274 5 0 410 683 405382401 405382674 1.630000e-131 479.0
3 TraesCS1D01G288200 chr1D 97.122 278 6 2 406 683 380770901 380771176 3.530000e-128 468.0
4 TraesCS1D01G288200 chr1D 100.000 69 0 0 1 69 386797772 386797704 6.810000e-26 128.0
5 TraesCS1D01G288200 chr1D 98.077 52 0 1 130 181 386787376 386787326 3.210000e-14 89.8
6 TraesCS1D01G288200 chr1D 98.077 52 0 1 731 781 386787977 386787926 3.210000e-14 89.8
7 TraesCS1D01G288200 chr1A 89.064 1335 78 35 685 1993 486598856 486597564 0.000000e+00 1594.0
8 TraesCS1D01G288200 chr1A 81.883 1264 111 64 732 1926 486581680 486580466 0.000000e+00 957.0
9 TraesCS1D01G288200 chr1A 90.260 308 22 4 2043 2348 486597569 486597268 1.690000e-106 396.0
10 TraesCS1D01G288200 chr1A 89.732 224 16 4 190 411 486599072 486598854 1.780000e-71 279.0
11 TraesCS1D01G288200 chr1A 82.400 125 5 6 70 177 486598886 486598762 2.480000e-15 93.5
12 TraesCS1D01G288200 chr1B 86.646 981 52 26 688 1609 520277580 520276620 0.000000e+00 1013.0
13 TraesCS1D01G288200 chr1B 90.579 605 40 14 1596 2197 520276329 520275739 0.000000e+00 785.0
14 TraesCS1D01G288200 chr1B 83.333 612 49 34 1357 1926 520144918 520144318 1.240000e-142 516.0
15 TraesCS1D01G288200 chr1B 81.121 535 33 37 1369 1849 520242785 520242265 1.330000e-97 366.0
16 TraesCS1D01G288200 chr1B 86.594 276 25 9 1075 1350 520243105 520242842 6.350000e-76 294.0
17 TraesCS1D01G288200 chr1B 91.525 118 7 1 293 410 520277696 520277582 2.420000e-35 159.0
18 TraesCS1D01G288200 chr1B 83.871 124 4 6 70 177 520277613 520277490 1.150000e-18 104.0
19 TraesCS1D01G288200 chr1B 100.000 52 0 0 1 52 624072700 624072649 1.920000e-16 97.1
20 TraesCS1D01G288200 chr1B 100.000 45 0 0 2304 2348 520275733 520275689 1.500000e-12 84.2
21 TraesCS1D01G288200 chr2D 98.201 278 4 1 406 683 648643072 648643348 3.510000e-133 484.0
22 TraesCS1D01G288200 chr2D 97.810 274 6 0 410 683 170607988 170607715 7.590000e-130 473.0
23 TraesCS1D01G288200 chr7D 98.175 274 5 0 410 683 38661946 38661673 1.630000e-131 479.0
24 TraesCS1D01G288200 chr7D 98.630 73 0 1 1 73 88084043 88083972 6.810000e-26 128.0
25 TraesCS1D01G288200 chr7D 98.551 69 1 0 1 69 88132040 88131972 3.170000e-24 122.0
26 TraesCS1D01G288200 chrUn 97.810 274 6 0 410 683 68214721 68214448 7.590000e-130 473.0
27 TraesCS1D01G288200 chr5D 97.810 274 6 0 410 683 416871374 416871647 7.590000e-130 473.0
28 TraesCS1D01G288200 chr5D 97.810 274 6 0 410 683 487560164 487559891 7.590000e-130 473.0
29 TraesCS1D01G288200 chr3D 97.810 274 6 0 410 683 83890887 83890614 7.590000e-130 473.0
30 TraesCS1D01G288200 chr4D 96.552 58 2 0 1 58 35382814 35382871 1.920000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G288200 chr1D 386785759 386788106 2347 True 1505.533333 4337 98.7180 1 2348 3 chr1D.!!$R3 2347
1 TraesCS1D01G288200 chr1D 386749189 386750481 1292 True 1000.000000 1000 81.7840 681 1928 1 chr1D.!!$R1 1247
2 TraesCS1D01G288200 chr1A 486580466 486581680 1214 True 957.000000 957 81.8830 732 1926 1 chr1A.!!$R1 1194
3 TraesCS1D01G288200 chr1A 486597268 486599072 1804 True 590.625000 1594 87.8640 70 2348 4 chr1A.!!$R2 2278
4 TraesCS1D01G288200 chr1B 520144318 520144918 600 True 516.000000 516 83.3330 1357 1926 1 chr1B.!!$R1 569
5 TraesCS1D01G288200 chr1B 520275689 520277696 2007 True 429.040000 1013 90.5242 70 2348 5 chr1B.!!$R4 2278
6 TraesCS1D01G288200 chr1B 520242265 520243105 840 True 330.000000 366 83.8575 1075 1849 2 chr1B.!!$R3 774

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
182 183 0.039035 AAAGCGGGCCCACAATTCTA 59.961 50.0 24.92 0.0 0.0 2.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1777 2281 0.386476 CGGACGGATCGGACCATAAA 59.614 55.0 18.79 0.0 0.0 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.075678 ACCCAATCTTCAATCAATGAGAATATC 57.924 33.333 0.00 0.00 39.77 1.63
27 28 8.521176 CCCAATCTTCAATCAATGAGAATATCC 58.479 37.037 0.00 0.00 39.77 2.59
28 29 9.298250 CCAATCTTCAATCAATGAGAATATCCT 57.702 33.333 0.00 0.00 39.77 3.24
32 33 9.347240 TCTTCAATCAATGAGAATATCCTTTCC 57.653 33.333 0.00 0.00 39.77 3.13
33 34 9.128404 CTTCAATCAATGAGAATATCCTTTCCA 57.872 33.333 0.00 0.00 39.77 3.53
34 35 9.650714 TTCAATCAATGAGAATATCCTTTCCAT 57.349 29.630 0.00 0.00 39.77 3.41
35 36 9.293404 TCAATCAATGAGAATATCCTTTCCATC 57.707 33.333 0.00 0.00 33.04 3.51
36 37 9.074576 CAATCAATGAGAATATCCTTTCCATCA 57.925 33.333 0.00 0.00 0.00 3.07
37 38 9.824216 AATCAATGAGAATATCCTTTCCATCAT 57.176 29.630 0.00 0.00 0.00 2.45
38 39 9.824216 ATCAATGAGAATATCCTTTCCATCATT 57.176 29.630 0.00 0.00 33.90 2.57
39 40 9.650714 TCAATGAGAATATCCTTTCCATCATTT 57.349 29.630 0.00 0.00 32.52 2.32
40 41 9.692749 CAATGAGAATATCCTTTCCATCATTTG 57.307 33.333 0.00 0.00 32.52 2.32
41 42 7.281040 TGAGAATATCCTTTCCATCATTTGC 57.719 36.000 0.00 0.00 0.00 3.68
42 43 7.064866 TGAGAATATCCTTTCCATCATTTGCT 58.935 34.615 0.00 0.00 0.00 3.91
43 44 7.230108 TGAGAATATCCTTTCCATCATTTGCTC 59.770 37.037 0.00 0.00 0.00 4.26
44 45 7.296098 AGAATATCCTTTCCATCATTTGCTCT 58.704 34.615 0.00 0.00 0.00 4.09
45 46 7.447853 AGAATATCCTTTCCATCATTTGCTCTC 59.552 37.037 0.00 0.00 0.00 3.20
46 47 3.624777 TCCTTTCCATCATTTGCTCTCC 58.375 45.455 0.00 0.00 0.00 3.71
47 48 2.692041 CCTTTCCATCATTTGCTCTCCC 59.308 50.000 0.00 0.00 0.00 4.30
48 49 3.626729 CCTTTCCATCATTTGCTCTCCCT 60.627 47.826 0.00 0.00 0.00 4.20
49 50 3.287867 TTCCATCATTTGCTCTCCCTC 57.712 47.619 0.00 0.00 0.00 4.30
50 51 2.485659 TCCATCATTTGCTCTCCCTCT 58.514 47.619 0.00 0.00 0.00 3.69
51 52 2.437281 TCCATCATTTGCTCTCCCTCTC 59.563 50.000 0.00 0.00 0.00 3.20
52 53 2.438763 CCATCATTTGCTCTCCCTCTCT 59.561 50.000 0.00 0.00 0.00 3.10
53 54 3.494749 CCATCATTTGCTCTCCCTCTCTC 60.495 52.174 0.00 0.00 0.00 3.20
54 55 1.753649 TCATTTGCTCTCCCTCTCTCG 59.246 52.381 0.00 0.00 0.00 4.04
55 56 1.480137 CATTTGCTCTCCCTCTCTCGT 59.520 52.381 0.00 0.00 0.00 4.18
56 57 1.633774 TTTGCTCTCCCTCTCTCGTT 58.366 50.000 0.00 0.00 0.00 3.85
57 58 1.633774 TTGCTCTCCCTCTCTCGTTT 58.366 50.000 0.00 0.00 0.00 3.60
58 59 1.178276 TGCTCTCCCTCTCTCGTTTC 58.822 55.000 0.00 0.00 0.00 2.78
59 60 1.272203 TGCTCTCCCTCTCTCGTTTCT 60.272 52.381 0.00 0.00 0.00 2.52
60 61 1.404035 GCTCTCCCTCTCTCGTTTCTC 59.596 57.143 0.00 0.00 0.00 2.87
61 62 2.944094 GCTCTCCCTCTCTCGTTTCTCT 60.944 54.545 0.00 0.00 0.00 3.10
62 63 2.943033 CTCTCCCTCTCTCGTTTCTCTC 59.057 54.545 0.00 0.00 0.00 3.20
63 64 2.574369 TCTCCCTCTCTCGTTTCTCTCT 59.426 50.000 0.00 0.00 0.00 3.10
64 65 3.775866 TCTCCCTCTCTCGTTTCTCTCTA 59.224 47.826 0.00 0.00 0.00 2.43
65 66 4.225492 TCTCCCTCTCTCGTTTCTCTCTAA 59.775 45.833 0.00 0.00 0.00 2.10
66 67 4.919793 TCCCTCTCTCGTTTCTCTCTAAA 58.080 43.478 0.00 0.00 0.00 1.85
67 68 4.701171 TCCCTCTCTCGTTTCTCTCTAAAC 59.299 45.833 0.00 0.00 36.26 2.01
68 69 4.459685 CCCTCTCTCGTTTCTCTCTAAACA 59.540 45.833 0.00 0.00 38.93 2.83
69 70 5.392595 CCCTCTCTCGTTTCTCTCTAAACAG 60.393 48.000 0.00 0.00 38.93 3.16
70 71 5.413213 CCTCTCTCGTTTCTCTCTAAACAGA 59.587 44.000 0.00 0.00 38.93 3.41
71 72 6.243811 TCTCTCGTTTCTCTCTAAACAGAC 57.756 41.667 0.00 0.00 38.93 3.51
72 73 5.998981 TCTCTCGTTTCTCTCTAAACAGACT 59.001 40.000 0.00 0.00 38.93 3.24
73 74 6.487331 TCTCTCGTTTCTCTCTAAACAGACTT 59.513 38.462 0.00 0.00 38.93 3.01
74 75 6.439599 TCTCGTTTCTCTCTAAACAGACTTG 58.560 40.000 0.00 0.00 38.93 3.16
75 76 6.262496 TCTCGTTTCTCTCTAAACAGACTTGA 59.738 38.462 0.00 0.00 38.93 3.02
76 77 6.207213 TCGTTTCTCTCTAAACAGACTTGAC 58.793 40.000 0.00 0.00 38.93 3.18
77 78 5.115773 CGTTTCTCTCTAAACAGACTTGACG 59.884 44.000 0.00 0.00 38.93 4.35
78 79 6.207213 GTTTCTCTCTAAACAGACTTGACGA 58.793 40.000 0.00 0.00 38.85 4.20
79 80 5.614923 TCTCTCTAAACAGACTTGACGAG 57.385 43.478 0.00 0.00 0.00 4.18
80 81 4.083217 TCTCTCTAAACAGACTTGACGAGC 60.083 45.833 0.00 0.00 0.00 5.03
81 82 2.911723 CTCTAAACAGACTTGACGAGCG 59.088 50.000 0.00 0.00 0.00 5.03
82 83 2.551032 TCTAAACAGACTTGACGAGCGA 59.449 45.455 0.00 0.00 0.00 4.93
83 84 1.488527 AAACAGACTTGACGAGCGAC 58.511 50.000 0.00 0.00 0.00 5.19
84 85 0.384309 AACAGACTTGACGAGCGACA 59.616 50.000 0.00 0.00 0.00 4.35
85 86 0.039978 ACAGACTTGACGAGCGACAG 60.040 55.000 0.00 0.00 0.00 3.51
86 87 1.081108 AGACTTGACGAGCGACAGC 60.081 57.895 0.00 0.00 45.58 4.40
97 98 2.022902 CGACAGCGCGATACGTCT 59.977 61.111 12.10 0.00 46.11 4.18
98 99 1.582937 CGACAGCGCGATACGTCTT 60.583 57.895 12.10 0.00 46.11 3.01
99 100 1.521749 CGACAGCGCGATACGTCTTC 61.522 60.000 12.10 0.00 46.11 2.87
100 101 0.522705 GACAGCGCGATACGTCTTCA 60.523 55.000 12.10 0.00 46.11 3.02
101 102 0.100682 ACAGCGCGATACGTCTTCAT 59.899 50.000 12.10 0.00 46.11 2.57
102 103 0.500178 CAGCGCGATACGTCTTCATG 59.500 55.000 12.10 0.00 46.11 3.07
103 104 0.100682 AGCGCGATACGTCTTCATGT 59.899 50.000 12.10 0.00 46.11 3.21
104 105 0.921347 GCGCGATACGTCTTCATGTT 59.079 50.000 12.10 0.00 46.11 2.71
105 106 1.323534 GCGCGATACGTCTTCATGTTT 59.676 47.619 12.10 0.00 46.11 2.83
106 107 2.594498 GCGCGATACGTCTTCATGTTTC 60.594 50.000 12.10 0.00 46.11 2.78
107 108 2.852413 CGCGATACGTCTTCATGTTTCT 59.148 45.455 0.00 0.00 36.87 2.52
108 109 3.303495 CGCGATACGTCTTCATGTTTCTT 59.697 43.478 0.00 0.00 36.87 2.52
109 110 4.546456 CGCGATACGTCTTCATGTTTCTTC 60.546 45.833 0.00 0.00 36.87 2.87
110 111 4.546456 GCGATACGTCTTCATGTTTCTTCG 60.546 45.833 0.00 0.00 0.00 3.79
111 112 4.791676 CGATACGTCTTCATGTTTCTTCGA 59.208 41.667 0.00 0.00 0.00 3.71
112 113 5.052960 CGATACGTCTTCATGTTTCTTCGAG 60.053 44.000 0.00 0.00 0.00 4.04
113 114 4.238761 ACGTCTTCATGTTTCTTCGAGA 57.761 40.909 0.00 0.00 0.00 4.04
114 115 4.617959 ACGTCTTCATGTTTCTTCGAGAA 58.382 39.130 0.00 0.00 31.28 2.87
115 116 5.047847 ACGTCTTCATGTTTCTTCGAGAAA 58.952 37.500 6.10 6.10 41.51 2.52
123 124 3.963383 TTTCTTCGAGAAACCTTGCAC 57.037 42.857 6.10 0.00 39.13 4.57
124 125 2.910688 TCTTCGAGAAACCTTGCACT 57.089 45.000 0.00 0.00 0.00 4.40
125 126 2.483876 TCTTCGAGAAACCTTGCACTG 58.516 47.619 0.00 0.00 0.00 3.66
126 127 0.944386 TTCGAGAAACCTTGCACTGC 59.056 50.000 0.00 0.00 0.00 4.40
127 128 0.106708 TCGAGAAACCTTGCACTGCT 59.893 50.000 1.98 0.00 0.00 4.24
128 129 0.236711 CGAGAAACCTTGCACTGCTG 59.763 55.000 1.98 0.00 0.00 4.41
129 130 1.597742 GAGAAACCTTGCACTGCTGA 58.402 50.000 1.98 0.00 0.00 4.26
130 131 1.534595 GAGAAACCTTGCACTGCTGAG 59.465 52.381 1.98 0.64 0.00 3.35
131 132 0.039708 GAAACCTTGCACTGCTGAGC 60.040 55.000 0.00 0.00 0.00 4.26
132 133 1.458639 AAACCTTGCACTGCTGAGCC 61.459 55.000 0.23 0.00 0.00 4.70
133 134 2.281970 CCTTGCACTGCTGAGCCA 60.282 61.111 0.23 0.00 0.00 4.75
134 135 2.623915 CCTTGCACTGCTGAGCCAC 61.624 63.158 0.23 0.00 0.00 5.01
135 136 1.600076 CTTGCACTGCTGAGCCACT 60.600 57.895 0.23 0.00 0.00 4.00
136 137 0.321034 CTTGCACTGCTGAGCCACTA 60.321 55.000 0.23 0.00 0.00 2.74
137 138 0.321034 TTGCACTGCTGAGCCACTAG 60.321 55.000 0.23 0.00 0.00 2.57
138 139 2.105466 GCACTGCTGAGCCACTAGC 61.105 63.158 0.23 0.00 44.25 3.42
139 140 1.294459 CACTGCTGAGCCACTAGCA 59.706 57.895 0.23 0.00 46.79 3.49
147 148 3.507009 GCCACTAGCAGCAGCAGC 61.507 66.667 3.17 0.46 45.49 5.25
148 149 2.823147 CCACTAGCAGCAGCAGCC 60.823 66.667 6.10 0.00 45.49 4.85
149 150 2.046604 CACTAGCAGCAGCAGCCA 60.047 61.111 6.10 0.00 45.49 4.75
150 151 1.673337 CACTAGCAGCAGCAGCCAA 60.673 57.895 6.10 0.00 45.49 4.52
151 152 1.673665 ACTAGCAGCAGCAGCCAAC 60.674 57.895 6.10 0.00 45.49 3.77
152 153 2.743538 TAGCAGCAGCAGCCAACG 60.744 61.111 6.10 0.00 45.49 4.10
153 154 3.535629 TAGCAGCAGCAGCCAACGT 62.536 57.895 6.10 0.00 45.49 3.99
154 155 4.695231 GCAGCAGCAGCCAACGTG 62.695 66.667 0.00 0.00 43.56 4.49
155 156 4.034258 CAGCAGCAGCCAACGTGG 62.034 66.667 0.00 0.00 43.56 4.94
156 157 4.254709 AGCAGCAGCCAACGTGGA 62.255 61.111 8.04 0.00 40.96 4.02
157 158 3.286751 GCAGCAGCCAACGTGGAA 61.287 61.111 8.04 0.00 40.96 3.53
158 159 2.844451 GCAGCAGCCAACGTGGAAA 61.844 57.895 8.04 0.00 40.96 3.13
159 160 1.283793 CAGCAGCCAACGTGGAAAG 59.716 57.895 8.04 0.00 40.96 2.62
160 161 1.152963 AGCAGCCAACGTGGAAAGT 60.153 52.632 8.04 0.00 40.96 2.66
161 162 0.107831 AGCAGCCAACGTGGAAAGTA 59.892 50.000 8.04 0.00 40.96 2.24
162 163 0.237498 GCAGCCAACGTGGAAAGTAC 59.763 55.000 8.04 0.00 40.96 2.73
163 164 1.588674 CAGCCAACGTGGAAAGTACA 58.411 50.000 8.04 0.00 40.96 2.90
164 165 1.944024 CAGCCAACGTGGAAAGTACAA 59.056 47.619 8.04 0.00 40.96 2.41
165 166 2.356382 CAGCCAACGTGGAAAGTACAAA 59.644 45.455 8.04 0.00 40.96 2.83
166 167 2.616842 AGCCAACGTGGAAAGTACAAAG 59.383 45.455 8.04 0.00 40.96 2.77
167 168 2.857104 GCCAACGTGGAAAGTACAAAGC 60.857 50.000 8.04 0.00 40.96 3.51
168 169 2.601266 CCAACGTGGAAAGTACAAAGCG 60.601 50.000 0.00 0.00 40.96 4.68
169 170 1.223187 ACGTGGAAAGTACAAAGCGG 58.777 50.000 0.00 0.00 0.00 5.52
170 171 0.515564 CGTGGAAAGTACAAAGCGGG 59.484 55.000 0.00 0.00 0.00 6.13
171 172 0.240145 GTGGAAAGTACAAAGCGGGC 59.760 55.000 0.00 0.00 0.00 6.13
172 173 0.891904 TGGAAAGTACAAAGCGGGCC 60.892 55.000 0.00 0.00 0.00 5.80
173 174 1.592400 GGAAAGTACAAAGCGGGCCC 61.592 60.000 13.57 13.57 0.00 5.80
174 175 0.891904 GAAAGTACAAAGCGGGCCCA 60.892 55.000 24.92 0.00 0.00 5.36
175 176 1.176619 AAAGTACAAAGCGGGCCCAC 61.177 55.000 24.92 13.54 0.00 4.61
176 177 2.281900 GTACAAAGCGGGCCCACA 60.282 61.111 24.92 0.00 0.00 4.17
177 178 1.899534 GTACAAAGCGGGCCCACAA 60.900 57.895 24.92 0.00 0.00 3.33
178 179 1.075836 TACAAAGCGGGCCCACAAT 59.924 52.632 24.92 1.74 0.00 2.71
179 180 0.540830 TACAAAGCGGGCCCACAATT 60.541 50.000 24.92 8.92 0.00 2.32
180 181 1.079888 CAAAGCGGGCCCACAATTC 60.080 57.895 24.92 2.67 0.00 2.17
181 182 1.228862 AAAGCGGGCCCACAATTCT 60.229 52.632 24.92 5.19 0.00 2.40
182 183 0.039035 AAAGCGGGCCCACAATTCTA 59.961 50.000 24.92 0.00 0.00 2.10
183 184 0.258774 AAGCGGGCCCACAATTCTAT 59.741 50.000 24.92 0.00 0.00 1.98
184 185 1.136828 AGCGGGCCCACAATTCTATA 58.863 50.000 24.92 0.00 0.00 1.31
185 186 1.705186 AGCGGGCCCACAATTCTATAT 59.295 47.619 24.92 0.00 0.00 0.86
186 187 1.812571 GCGGGCCCACAATTCTATATG 59.187 52.381 24.92 0.60 0.00 1.78
187 188 2.814097 GCGGGCCCACAATTCTATATGT 60.814 50.000 24.92 0.00 0.00 2.29
188 189 3.074412 CGGGCCCACAATTCTATATGTC 58.926 50.000 24.92 0.00 0.00 3.06
189 190 3.495983 CGGGCCCACAATTCTATATGTCA 60.496 47.826 24.92 0.00 0.00 3.58
190 191 4.666512 GGGCCCACAATTCTATATGTCAT 58.333 43.478 19.95 0.00 0.00 3.06
191 192 4.460382 GGGCCCACAATTCTATATGTCATG 59.540 45.833 19.95 0.00 0.00 3.07
192 193 5.072741 GGCCCACAATTCTATATGTCATGT 58.927 41.667 0.00 0.00 0.00 3.21
193 194 5.048504 GGCCCACAATTCTATATGTCATGTG 60.049 44.000 0.00 0.00 37.14 3.21
213 214 3.323136 CGCGCCTTTCTCCGATCG 61.323 66.667 8.51 8.51 0.00 3.69
264 265 3.239861 GCTCAAGCTAGCACTTGGT 57.760 52.632 18.83 0.00 45.77 3.67
266 267 1.446907 CTCAAGCTAGCACTTGGTGG 58.553 55.000 18.83 4.57 45.77 4.61
267 268 0.764890 TCAAGCTAGCACTTGGTGGT 59.235 50.000 18.83 7.50 45.77 4.16
269 270 2.370519 TCAAGCTAGCACTTGGTGGTAA 59.629 45.455 18.83 0.00 44.15 2.85
270 271 3.009033 TCAAGCTAGCACTTGGTGGTAAT 59.991 43.478 18.83 0.00 44.15 1.89
279 280 3.074412 ACTTGGTGGTAATGAAAGCGAG 58.926 45.455 0.00 0.00 0.00 5.03
344 345 5.105064 CCAATCTGCTTCTTCCCATGATTTT 60.105 40.000 0.00 0.00 0.00 1.82
394 397 0.933509 GACTTGACGAGCGACAACGT 60.934 55.000 3.86 6.74 45.32 3.99
399 402 1.181001 GACGAGCGACAACGTGATAG 58.819 55.000 0.00 0.00 42.74 2.08
400 403 0.520404 ACGAGCGACAACGTGATAGT 59.480 50.000 0.00 0.00 41.17 2.12
401 404 1.733912 ACGAGCGACAACGTGATAGTA 59.266 47.619 0.00 0.00 41.17 1.82
413 416 4.861389 CGTGATAGTACGTCTTCAGACT 57.139 45.455 5.44 0.00 42.66 3.24
414 417 5.963140 CGTGATAGTACGTCTTCAGACTA 57.037 43.478 5.44 0.00 42.66 2.59
415 418 5.965202 CGTGATAGTACGTCTTCAGACTAG 58.035 45.833 5.44 0.00 42.66 2.57
416 419 5.556758 CGTGATAGTACGTCTTCAGACTAGC 60.557 48.000 5.44 0.00 42.66 3.42
417 420 4.815308 TGATAGTACGTCTTCAGACTAGCC 59.185 45.833 6.70 0.14 42.66 3.93
418 421 3.069079 AGTACGTCTTCAGACTAGCCA 57.931 47.619 5.44 0.00 42.66 4.75
419 422 2.748532 AGTACGTCTTCAGACTAGCCAC 59.251 50.000 5.44 0.00 42.66 5.01
420 423 1.617322 ACGTCTTCAGACTAGCCACA 58.383 50.000 5.44 0.00 42.66 4.17
421 424 1.542030 ACGTCTTCAGACTAGCCACAG 59.458 52.381 5.44 0.00 42.66 3.66
422 425 1.542030 CGTCTTCAGACTAGCCACAGT 59.458 52.381 5.44 0.00 42.66 3.55
423 426 2.669670 CGTCTTCAGACTAGCCACAGTG 60.670 54.545 5.44 0.00 42.66 3.66
424 427 1.895798 TCTTCAGACTAGCCACAGTGG 59.104 52.381 16.16 16.16 41.55 4.00
425 428 0.976641 TTCAGACTAGCCACAGTGGG 59.023 55.000 21.77 7.25 38.19 4.61
426 429 0.114364 TCAGACTAGCCACAGTGGGA 59.886 55.000 21.77 5.05 38.19 4.37
427 430 0.534412 CAGACTAGCCACAGTGGGAG 59.466 60.000 21.77 0.00 38.19 4.30
428 431 0.115349 AGACTAGCCACAGTGGGAGT 59.885 55.000 21.77 2.87 38.19 3.85
429 432 1.358103 AGACTAGCCACAGTGGGAGTA 59.642 52.381 21.77 0.00 38.19 2.59
430 433 2.176889 GACTAGCCACAGTGGGAGTAA 58.823 52.381 21.77 0.00 38.19 2.24
431 434 1.900486 ACTAGCCACAGTGGGAGTAAC 59.100 52.381 21.77 3.06 38.19 2.50
432 435 2.180276 CTAGCCACAGTGGGAGTAACT 58.820 52.381 21.77 10.69 38.19 2.24
433 436 1.435256 AGCCACAGTGGGAGTAACTT 58.565 50.000 21.77 0.00 38.19 2.66
434 437 1.348036 AGCCACAGTGGGAGTAACTTC 59.652 52.381 21.77 0.78 38.19 3.01
435 438 1.939838 GCCACAGTGGGAGTAACTTCG 60.940 57.143 21.77 0.00 38.19 3.79
436 439 1.337823 CCACAGTGGGAGTAACTTCGG 60.338 57.143 12.40 0.00 32.67 4.30
437 440 1.343465 CACAGTGGGAGTAACTTCGGT 59.657 52.381 0.00 0.00 0.00 4.69
438 441 2.559668 CACAGTGGGAGTAACTTCGGTA 59.440 50.000 0.00 0.00 0.00 4.02
439 442 2.824341 ACAGTGGGAGTAACTTCGGTAG 59.176 50.000 0.00 0.00 0.00 3.18
440 443 2.824341 CAGTGGGAGTAACTTCGGTAGT 59.176 50.000 0.00 0.00 39.32 2.73
441 444 4.012374 CAGTGGGAGTAACTTCGGTAGTA 58.988 47.826 0.00 0.00 35.54 1.82
442 445 4.460382 CAGTGGGAGTAACTTCGGTAGTAA 59.540 45.833 0.00 0.00 35.54 2.24
443 446 4.460731 AGTGGGAGTAACTTCGGTAGTAAC 59.539 45.833 0.00 0.00 35.54 2.50
444 447 4.218417 GTGGGAGTAACTTCGGTAGTAACA 59.782 45.833 0.00 0.00 35.54 2.41
445 448 5.018809 TGGGAGTAACTTCGGTAGTAACAT 58.981 41.667 0.00 0.00 35.54 2.71
446 449 5.126061 TGGGAGTAACTTCGGTAGTAACATC 59.874 44.000 0.00 0.00 35.54 3.06
447 450 5.269313 GGAGTAACTTCGGTAGTAACATCG 58.731 45.833 0.00 0.00 35.54 3.84
448 451 5.065218 GGAGTAACTTCGGTAGTAACATCGA 59.935 44.000 0.00 0.00 35.54 3.59
449 452 6.116680 AGTAACTTCGGTAGTAACATCGAG 57.883 41.667 0.00 0.00 35.54 4.04
450 453 5.645497 AGTAACTTCGGTAGTAACATCGAGT 59.355 40.000 0.00 0.00 35.54 4.18
451 454 4.612932 ACTTCGGTAGTAACATCGAGTC 57.387 45.455 0.00 0.00 34.56 3.36
452 455 3.376546 ACTTCGGTAGTAACATCGAGTCC 59.623 47.826 0.00 0.00 34.56 3.85
453 456 2.989909 TCGGTAGTAACATCGAGTCCA 58.010 47.619 0.00 0.00 0.00 4.02
454 457 3.346315 TCGGTAGTAACATCGAGTCCAA 58.654 45.455 0.00 0.00 0.00 3.53
455 458 3.127548 TCGGTAGTAACATCGAGTCCAAC 59.872 47.826 0.00 0.00 0.00 3.77
456 459 3.128242 CGGTAGTAACATCGAGTCCAACT 59.872 47.826 0.00 0.00 0.00 3.16
457 460 4.670347 GGTAGTAACATCGAGTCCAACTC 58.330 47.826 0.00 0.00 41.71 3.01
458 461 4.157289 GGTAGTAACATCGAGTCCAACTCA 59.843 45.833 7.78 0.00 45.30 3.41
459 462 4.442375 AGTAACATCGAGTCCAACTCAG 57.558 45.455 7.78 1.37 45.30 3.35
460 463 2.086054 AACATCGAGTCCAACTCAGC 57.914 50.000 7.78 0.00 45.30 4.26
461 464 0.969149 ACATCGAGTCCAACTCAGCA 59.031 50.000 7.78 0.00 45.30 4.41
462 465 1.344438 ACATCGAGTCCAACTCAGCAA 59.656 47.619 7.78 0.00 45.30 3.91
463 466 2.027745 ACATCGAGTCCAACTCAGCAAT 60.028 45.455 7.78 0.00 45.30 3.56
464 467 2.839486 TCGAGTCCAACTCAGCAATT 57.161 45.000 7.78 0.00 45.30 2.32
465 468 3.126001 TCGAGTCCAACTCAGCAATTT 57.874 42.857 7.78 0.00 45.30 1.82
466 469 3.476552 TCGAGTCCAACTCAGCAATTTT 58.523 40.909 7.78 0.00 45.30 1.82
467 470 3.250762 TCGAGTCCAACTCAGCAATTTTG 59.749 43.478 7.78 0.00 45.30 2.44
468 471 3.311966 GAGTCCAACTCAGCAATTTTGC 58.688 45.455 7.19 7.19 44.45 3.68
483 486 6.102006 CAATTTTGCTTATGTGGCAATGAG 57.898 37.500 2.01 0.00 46.81 2.90
484 487 4.870123 TTTTGCTTATGTGGCAATGAGT 57.130 36.364 2.01 0.00 46.81 3.41
485 488 4.870123 TTTGCTTATGTGGCAATGAGTT 57.130 36.364 2.01 0.00 46.81 3.01
486 489 5.973899 TTTGCTTATGTGGCAATGAGTTA 57.026 34.783 2.01 0.00 46.81 2.24
487 490 5.973899 TTGCTTATGTGGCAATGAGTTAA 57.026 34.783 0.00 0.00 43.50 2.01
488 491 6.528537 TTGCTTATGTGGCAATGAGTTAAT 57.471 33.333 0.00 0.00 43.50 1.40
489 492 5.893687 TGCTTATGTGGCAATGAGTTAATG 58.106 37.500 0.00 0.00 36.71 1.90
490 493 5.651576 TGCTTATGTGGCAATGAGTTAATGA 59.348 36.000 0.00 0.00 36.71 2.57
491 494 6.183360 TGCTTATGTGGCAATGAGTTAATGAG 60.183 38.462 0.00 0.00 36.71 2.90
492 495 6.698008 TTATGTGGCAATGAGTTAATGAGG 57.302 37.500 0.00 0.00 0.00 3.86
493 496 4.299586 TGTGGCAATGAGTTAATGAGGA 57.700 40.909 0.00 0.00 0.00 3.71
494 497 4.264253 TGTGGCAATGAGTTAATGAGGAG 58.736 43.478 0.00 0.00 0.00 3.69
495 498 4.019411 TGTGGCAATGAGTTAATGAGGAGA 60.019 41.667 0.00 0.00 0.00 3.71
496 499 4.574013 GTGGCAATGAGTTAATGAGGAGAG 59.426 45.833 0.00 0.00 0.00 3.20
497 500 4.471025 TGGCAATGAGTTAATGAGGAGAGA 59.529 41.667 0.00 0.00 0.00 3.10
498 501 5.131642 TGGCAATGAGTTAATGAGGAGAGAT 59.868 40.000 0.00 0.00 0.00 2.75
499 502 5.469421 GGCAATGAGTTAATGAGGAGAGATG 59.531 44.000 0.00 0.00 0.00 2.90
500 503 6.054295 GCAATGAGTTAATGAGGAGAGATGT 58.946 40.000 0.00 0.00 0.00 3.06
501 504 7.212976 GCAATGAGTTAATGAGGAGAGATGTA 58.787 38.462 0.00 0.00 0.00 2.29
502 505 7.384660 GCAATGAGTTAATGAGGAGAGATGTAG 59.615 40.741 0.00 0.00 0.00 2.74
503 506 8.420222 CAATGAGTTAATGAGGAGAGATGTAGT 58.580 37.037 0.00 0.00 0.00 2.73
504 507 9.647918 AATGAGTTAATGAGGAGAGATGTAGTA 57.352 33.333 0.00 0.00 0.00 1.82
505 508 8.453238 TGAGTTAATGAGGAGAGATGTAGTAC 57.547 38.462 0.00 0.00 0.00 2.73
506 509 8.275758 TGAGTTAATGAGGAGAGATGTAGTACT 58.724 37.037 0.00 0.00 0.00 2.73
507 510 9.781633 GAGTTAATGAGGAGAGATGTAGTACTA 57.218 37.037 0.00 0.00 0.00 1.82
508 511 9.787435 AGTTAATGAGGAGAGATGTAGTACTAG 57.213 37.037 1.87 0.00 0.00 2.57
509 512 9.563748 GTTAATGAGGAGAGATGTAGTACTAGT 57.436 37.037 1.87 0.00 0.00 2.57
512 515 9.563748 AATGAGGAGAGATGTAGTACTAGTAAC 57.436 37.037 3.61 0.77 0.00 2.50
513 516 8.321621 TGAGGAGAGATGTAGTACTAGTAACT 57.678 38.462 3.61 7.14 0.00 2.24
514 517 8.770322 TGAGGAGAGATGTAGTACTAGTAACTT 58.230 37.037 3.61 0.00 0.00 2.66
517 520 8.992073 GGAGAGATGTAGTACTAGTAACTTAGC 58.008 40.741 3.61 0.00 0.00 3.09
518 521 9.768662 GAGAGATGTAGTACTAGTAACTTAGCT 57.231 37.037 3.61 0.33 0.00 3.32
535 538 8.983307 AACTTAGCTAGTTACTGTAACATCAC 57.017 34.615 27.12 15.70 45.22 3.06
536 539 8.118976 ACTTAGCTAGTTACTGTAACATCACA 57.881 34.615 27.12 10.61 41.07 3.58
537 540 8.750298 ACTTAGCTAGTTACTGTAACATCACAT 58.250 33.333 27.12 11.85 41.07 3.21
538 541 8.926715 TTAGCTAGTTACTGTAACATCACATG 57.073 34.615 27.12 12.57 41.07 3.21
540 543 7.036220 AGCTAGTTACTGTAACATCACATGTC 58.964 38.462 27.12 9.51 44.07 3.06
541 544 6.255887 GCTAGTTACTGTAACATCACATGTCC 59.744 42.308 27.12 1.73 44.07 4.02
542 545 5.488341 AGTTACTGTAACATCACATGTCCC 58.512 41.667 27.12 1.55 44.07 4.46
543 546 5.012664 AGTTACTGTAACATCACATGTCCCA 59.987 40.000 27.12 0.00 44.07 4.37
544 547 4.365514 ACTGTAACATCACATGTCCCAA 57.634 40.909 0.00 0.00 44.07 4.12
545 548 4.922206 ACTGTAACATCACATGTCCCAAT 58.078 39.130 0.00 0.00 44.07 3.16
546 549 4.701651 ACTGTAACATCACATGTCCCAATG 59.298 41.667 0.00 0.45 44.07 2.82
547 550 3.443329 TGTAACATCACATGTCCCAATGC 59.557 43.478 0.00 0.00 44.07 3.56
548 551 2.219080 ACATCACATGTCCCAATGCA 57.781 45.000 0.00 0.00 39.92 3.96
549 552 2.527497 ACATCACATGTCCCAATGCAA 58.473 42.857 0.00 0.00 39.92 4.08
550 553 3.101437 ACATCACATGTCCCAATGCAAT 58.899 40.909 0.00 0.00 39.92 3.56
551 554 4.279982 ACATCACATGTCCCAATGCAATA 58.720 39.130 0.00 0.00 39.92 1.90
552 555 4.897076 ACATCACATGTCCCAATGCAATAT 59.103 37.500 0.00 0.00 39.92 1.28
553 556 4.922471 TCACATGTCCCAATGCAATATG 57.078 40.909 0.00 0.00 0.00 1.78
554 557 4.534797 TCACATGTCCCAATGCAATATGA 58.465 39.130 0.00 0.00 0.00 2.15
555 558 4.954826 TCACATGTCCCAATGCAATATGAA 59.045 37.500 0.00 0.00 0.00 2.57
556 559 5.599242 TCACATGTCCCAATGCAATATGAAT 59.401 36.000 0.00 0.00 0.00 2.57
557 560 5.924254 CACATGTCCCAATGCAATATGAATC 59.076 40.000 0.00 0.00 0.00 2.52
558 561 5.836898 ACATGTCCCAATGCAATATGAATCT 59.163 36.000 0.00 0.00 0.00 2.40
559 562 7.005902 ACATGTCCCAATGCAATATGAATCTA 58.994 34.615 0.00 0.00 0.00 1.98
560 563 7.672660 ACATGTCCCAATGCAATATGAATCTAT 59.327 33.333 0.00 0.00 0.00 1.98
561 564 9.181061 CATGTCCCAATGCAATATGAATCTATA 57.819 33.333 0.00 0.00 0.00 1.31
562 565 9.758021 ATGTCCCAATGCAATATGAATCTATAA 57.242 29.630 0.00 0.00 0.00 0.98
563 566 9.758021 TGTCCCAATGCAATATGAATCTATAAT 57.242 29.630 0.00 0.00 0.00 1.28
565 568 9.758021 TCCCAATGCAATATGAATCTATAATGT 57.242 29.630 0.00 0.00 0.00 2.71
587 590 9.439500 AATGTAATAAATGAAGCTTTGCATGTT 57.561 25.926 0.00 1.51 0.00 2.71
589 592 9.352784 TGTAATAAATGAAGCTTTGCATGTTAC 57.647 29.630 0.00 10.91 0.00 2.50
590 593 7.832503 AATAAATGAAGCTTTGCATGTTACC 57.167 32.000 0.00 0.00 0.00 2.85
591 594 4.870123 AATGAAGCTTTGCATGTTACCA 57.130 36.364 0.00 0.00 0.00 3.25
592 595 3.641437 TGAAGCTTTGCATGTTACCAC 57.359 42.857 0.00 0.00 0.00 4.16
593 596 2.954989 TGAAGCTTTGCATGTTACCACA 59.045 40.909 0.00 0.00 37.31 4.17
594 597 3.243367 TGAAGCTTTGCATGTTACCACAC 60.243 43.478 0.00 0.00 35.03 3.82
595 598 2.586425 AGCTTTGCATGTTACCACACT 58.414 42.857 0.00 0.00 35.03 3.55
596 599 2.958355 AGCTTTGCATGTTACCACACTT 59.042 40.909 0.00 0.00 35.03 3.16
597 600 4.141287 AGCTTTGCATGTTACCACACTTA 58.859 39.130 0.00 0.00 35.03 2.24
598 601 4.766891 AGCTTTGCATGTTACCACACTTAT 59.233 37.500 0.00 0.00 35.03 1.73
599 602 4.858692 GCTTTGCATGTTACCACACTTATG 59.141 41.667 0.00 0.00 35.03 1.90
600 603 4.433186 TTGCATGTTACCACACTTATGC 57.567 40.909 0.00 0.00 36.24 3.14
601 604 3.684908 TGCATGTTACCACACTTATGCT 58.315 40.909 0.00 0.00 36.52 3.79
602 605 4.837972 TGCATGTTACCACACTTATGCTA 58.162 39.130 0.00 0.00 36.52 3.49
603 606 4.634004 TGCATGTTACCACACTTATGCTAC 59.366 41.667 0.00 0.00 36.52 3.58
604 607 4.876107 GCATGTTACCACACTTATGCTACT 59.124 41.667 0.00 0.00 33.92 2.57
605 608 6.046593 GCATGTTACCACACTTATGCTACTA 58.953 40.000 0.00 0.00 33.92 1.82
606 609 6.018994 GCATGTTACCACACTTATGCTACTAC 60.019 42.308 0.00 0.00 33.92 2.73
607 610 5.969423 TGTTACCACACTTATGCTACTACC 58.031 41.667 0.00 0.00 0.00 3.18
608 611 5.105228 TGTTACCACACTTATGCTACTACCC 60.105 44.000 0.00 0.00 0.00 3.69
609 612 3.446968 ACCACACTTATGCTACTACCCA 58.553 45.455 0.00 0.00 0.00 4.51
610 613 3.197116 ACCACACTTATGCTACTACCCAC 59.803 47.826 0.00 0.00 0.00 4.61
611 614 3.451178 CCACACTTATGCTACTACCCACT 59.549 47.826 0.00 0.00 0.00 4.00
612 615 4.647853 CCACACTTATGCTACTACCCACTA 59.352 45.833 0.00 0.00 0.00 2.74
613 616 5.304614 CCACACTTATGCTACTACCCACTAT 59.695 44.000 0.00 0.00 0.00 2.12
614 617 6.183360 CCACACTTATGCTACTACCCACTATT 60.183 42.308 0.00 0.00 0.00 1.73
615 618 6.701841 CACACTTATGCTACTACCCACTATTG 59.298 42.308 0.00 0.00 0.00 1.90
616 619 6.610020 ACACTTATGCTACTACCCACTATTGA 59.390 38.462 0.00 0.00 0.00 2.57
617 620 7.148641 CACTTATGCTACTACCCACTATTGAG 58.851 42.308 0.00 0.00 0.00 3.02
618 621 6.267928 ACTTATGCTACTACCCACTATTGAGG 59.732 42.308 0.00 0.00 0.00 3.86
619 622 3.990369 TGCTACTACCCACTATTGAGGT 58.010 45.455 0.00 0.00 37.69 3.85
620 623 5.133383 TGCTACTACCCACTATTGAGGTA 57.867 43.478 0.00 0.00 35.02 3.08
627 630 7.598759 CTACCCACTATTGAGGTAGTAACAT 57.401 40.000 14.91 0.00 45.39 2.71
628 631 8.701908 CTACCCACTATTGAGGTAGTAACATA 57.298 38.462 14.91 0.00 45.39 2.29
629 632 7.598759 ACCCACTATTGAGGTAGTAACATAG 57.401 40.000 0.00 0.00 33.29 2.23
630 633 7.359849 ACCCACTATTGAGGTAGTAACATAGA 58.640 38.462 0.00 0.00 33.29 1.98
631 634 7.506261 ACCCACTATTGAGGTAGTAACATAGAG 59.494 40.741 0.00 0.00 33.29 2.43
632 635 7.506261 CCCACTATTGAGGTAGTAACATAGAGT 59.494 40.741 0.00 0.00 33.29 3.24
633 636 9.570468 CCACTATTGAGGTAGTAACATAGAGTA 57.430 37.037 0.00 0.00 33.29 2.59
639 642 9.964354 TTGAGGTAGTAACATAGAGTACTAACA 57.036 33.333 0.00 1.25 35.72 2.41
642 645 9.352191 AGGTAGTAACATAGAGTACTAACATGG 57.648 37.037 0.00 0.00 35.72 3.66
643 646 8.574737 GGTAGTAACATAGAGTACTAACATGGG 58.425 40.741 0.00 0.00 34.01 4.00
644 647 7.052142 AGTAACATAGAGTACTAACATGGGC 57.948 40.000 0.00 0.00 32.04 5.36
645 648 5.950544 AACATAGAGTACTAACATGGGCA 57.049 39.130 0.00 0.00 32.04 5.36
646 649 6.500589 AACATAGAGTACTAACATGGGCAT 57.499 37.500 0.00 0.00 32.04 4.40
647 650 5.858381 ACATAGAGTACTAACATGGGCATG 58.142 41.667 0.00 0.00 44.15 4.06
661 664 5.858381 CATGGGCATGTTACTACTCTATGT 58.142 41.667 0.00 0.00 34.23 2.29
662 665 5.950544 TGGGCATGTTACTACTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
663 666 7.441836 CATGGGCATGTTACTACTCTATGTTA 58.558 38.462 0.00 0.00 34.23 2.41
664 667 6.812998 TGGGCATGTTACTACTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
665 668 6.610020 TGGGCATGTTACTACTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
666 669 7.781219 TGGGCATGTTACTACTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
667 670 8.081025 GGGCATGTTACTACTCTATGTTACTAC 58.919 40.741 0.00 0.00 0.00 2.73
668 671 8.081025 GGCATGTTACTACTCTATGTTACTACC 58.919 40.741 0.00 0.00 0.00 3.18
669 672 8.081025 GCATGTTACTACTCTATGTTACTACCC 58.919 40.741 0.00 0.00 0.00 3.69
670 673 9.128404 CATGTTACTACTCTATGTTACTACCCA 57.872 37.037 0.00 0.00 0.00 4.51
671 674 9.878737 ATGTTACTACTCTATGTTACTACCCAT 57.121 33.333 0.00 0.00 0.00 4.00
672 675 9.705103 TGTTACTACTCTATGTTACTACCCATT 57.295 33.333 0.00 0.00 0.00 3.16
673 676 9.962783 GTTACTACTCTATGTTACTACCCATTG 57.037 37.037 0.00 0.00 0.00 2.82
674 677 9.705103 TTACTACTCTATGTTACTACCCATTGT 57.295 33.333 0.00 0.00 0.00 2.71
675 678 8.008513 ACTACTCTATGTTACTACCCATTGTG 57.991 38.462 0.00 0.00 0.00 3.33
676 679 6.235231 ACTCTATGTTACTACCCATTGTGG 57.765 41.667 0.00 0.00 37.25 4.17
677 680 5.031066 TCTATGTTACTACCCATTGTGGC 57.969 43.478 0.00 0.00 35.79 5.01
678 681 4.719773 TCTATGTTACTACCCATTGTGGCT 59.280 41.667 0.00 0.00 35.79 4.75
679 682 5.900699 TCTATGTTACTACCCATTGTGGCTA 59.099 40.000 0.00 0.00 35.79 3.93
680 683 4.481368 TGTTACTACCCATTGTGGCTAG 57.519 45.455 0.00 0.00 35.79 3.42
681 684 3.841845 TGTTACTACCCATTGTGGCTAGT 59.158 43.478 8.55 8.55 35.79 2.57
682 685 4.081309 TGTTACTACCCATTGTGGCTAGTC 60.081 45.833 7.13 0.00 35.79 2.59
683 686 1.838077 ACTACCCATTGTGGCTAGTCC 59.162 52.381 0.00 0.00 35.79 3.85
694 697 0.992695 GGCTAGTCCCAGGTTCCTTT 59.007 55.000 0.00 0.00 0.00 3.11
696 699 1.340114 GCTAGTCCCAGGTTCCTTTGG 60.340 57.143 0.00 0.00 0.00 3.28
766 778 2.356382 CAGCCAACGTGGAAAGTACAAA 59.644 45.455 8.04 0.00 40.96 2.83
904 943 3.710722 CTGGTTGAGCCCGAGCCT 61.711 66.667 0.00 0.00 41.25 4.58
954 1007 3.801068 CTTTTGGGACCCGCCACCA 62.801 63.158 5.91 0.00 38.95 4.17
955 1008 3.801068 TTTTGGGACCCGCCACCAG 62.801 63.158 5.91 0.00 38.95 4.00
972 1025 1.150536 AGTGCTCTTTTCCGGCCAA 59.849 52.632 2.24 0.00 0.00 4.52
1181 1255 4.988598 CGGCAGCGACAACAGGGT 62.989 66.667 0.00 0.00 0.00 4.34
1536 1709 3.202373 TCTCTCCATCCCTAGTTTCTCGA 59.798 47.826 0.00 0.00 0.00 4.04
1546 1719 5.533154 TCCCTAGTTTCTCGATGATCTTCTC 59.467 44.000 6.99 0.00 0.00 2.87
1564 1745 2.595463 GCTGCTGCTGGTTGGTGA 60.595 61.111 8.53 0.00 36.03 4.02
1601 1785 3.164269 ATCTCGGGGGCTGCGAAT 61.164 61.111 0.00 0.00 0.00 3.34
1678 2165 0.248539 GCAGGTCTGGTCGATCGTAC 60.249 60.000 15.94 11.61 0.00 3.67
1713 2204 1.371389 GTGTGCTGCTGCTTGCTTC 60.371 57.895 17.00 11.07 43.37 3.86
1727 2218 3.705604 CTTGCTTCGGTTTGATTGTGTT 58.294 40.909 0.00 0.00 0.00 3.32
1728 2219 3.077229 TGCTTCGGTTTGATTGTGTTG 57.923 42.857 0.00 0.00 0.00 3.33
1729 2220 2.425312 TGCTTCGGTTTGATTGTGTTGT 59.575 40.909 0.00 0.00 0.00 3.32
1730 2221 2.788786 GCTTCGGTTTGATTGTGTTGTG 59.211 45.455 0.00 0.00 0.00 3.33
1731 2222 3.733684 GCTTCGGTTTGATTGTGTTGTGT 60.734 43.478 0.00 0.00 0.00 3.72
1776 2280 2.641815 GGAGGGATGGATCAGCAAGTAT 59.358 50.000 0.00 0.00 0.00 2.12
1777 2281 3.073650 GGAGGGATGGATCAGCAAGTATT 59.926 47.826 0.00 0.00 0.00 1.89
1853 2360 7.747155 TGGTTCCGTTCTTTATCAAAACATA 57.253 32.000 0.00 0.00 0.00 2.29
1943 2468 8.844441 TTCAAGTTTTGTACTAACATTTTCGG 57.156 30.769 12.04 0.00 35.54 4.30
1944 2469 7.419204 TCAAGTTTTGTACTAACATTTTCGGG 58.581 34.615 12.04 0.00 35.54 5.14
2007 2532 1.241165 TCATGTGTGCTGCAAGGAAG 58.759 50.000 2.77 0.00 34.45 3.46
2011 2536 2.098614 TGTGTGCTGCAAGGAAGAAAA 58.901 42.857 2.77 0.00 34.45 2.29
2013 2538 3.132646 TGTGTGCTGCAAGGAAGAAAAAT 59.867 39.130 2.77 0.00 34.45 1.82
2014 2539 4.340666 TGTGTGCTGCAAGGAAGAAAAATA 59.659 37.500 2.77 0.00 34.45 1.40
2015 2540 5.010922 TGTGTGCTGCAAGGAAGAAAAATAT 59.989 36.000 2.77 0.00 34.45 1.28
2038 2564 2.639327 GCGCTGTTTGAGGGGCAAT 61.639 57.895 0.00 0.00 40.38 3.56
2109 2635 4.109766 TGGTGATATCTTACGACGCAAAG 58.890 43.478 3.98 0.00 0.00 2.77
2130 2656 1.001068 CGCAGCTCATGATGGATCTCT 59.999 52.381 0.00 0.00 0.00 3.10
2167 2694 2.803817 AAGTCAAGTCACCGCCCGT 61.804 57.895 0.00 0.00 0.00 5.28
2234 2763 4.083003 CGCAAACTAGCCCTAAACAAATCA 60.083 41.667 0.00 0.00 0.00 2.57
2287 2816 0.394899 GGCCCATTAGCAGCTTCAGT 60.395 55.000 0.00 0.00 0.00 3.41
2292 2821 3.366679 CCCATTAGCAGCTTCAGTGTTTG 60.367 47.826 0.00 0.00 0.00 2.93
2301 2830 6.865205 AGCAGCTTCAGTGTTTGATTATTTTC 59.135 34.615 0.00 0.00 35.27 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.521176 GGATATTCTCATTGATTGAAGATTGGG 58.479 37.037 0.00 0.00 32.78 4.12
6 7 9.347240 GGAAAGGATATTCTCATTGATTGAAGA 57.653 33.333 0.00 0.00 32.78 2.87
7 8 9.128404 TGGAAAGGATATTCTCATTGATTGAAG 57.872 33.333 0.00 0.00 32.78 3.02
8 9 9.650714 ATGGAAAGGATATTCTCATTGATTGAA 57.349 29.630 0.00 0.00 32.78 2.69
10 11 9.074576 TGATGGAAAGGATATTCTCATTGATTG 57.925 33.333 0.00 0.00 0.00 2.67
11 12 9.824216 ATGATGGAAAGGATATTCTCATTGATT 57.176 29.630 0.00 0.00 0.00 2.57
13 14 9.650714 AAATGATGGAAAGGATATTCTCATTGA 57.349 29.630 0.00 0.00 35.80 2.57
14 15 9.692749 CAAATGATGGAAAGGATATTCTCATTG 57.307 33.333 0.00 0.00 35.80 2.82
15 16 8.365647 GCAAATGATGGAAAGGATATTCTCATT 58.634 33.333 0.00 0.00 36.53 2.57
16 17 7.728981 AGCAAATGATGGAAAGGATATTCTCAT 59.271 33.333 0.00 0.00 30.08 2.90
17 18 7.064866 AGCAAATGATGGAAAGGATATTCTCA 58.935 34.615 0.00 0.00 0.00 3.27
18 19 7.447853 AGAGCAAATGATGGAAAGGATATTCTC 59.552 37.037 0.00 0.00 0.00 2.87
19 20 7.296098 AGAGCAAATGATGGAAAGGATATTCT 58.704 34.615 0.00 0.00 0.00 2.40
20 21 7.309073 GGAGAGCAAATGATGGAAAGGATATTC 60.309 40.741 0.00 0.00 0.00 1.75
21 22 6.492772 GGAGAGCAAATGATGGAAAGGATATT 59.507 38.462 0.00 0.00 0.00 1.28
22 23 6.008960 GGAGAGCAAATGATGGAAAGGATAT 58.991 40.000 0.00 0.00 0.00 1.63
23 24 5.380043 GGAGAGCAAATGATGGAAAGGATA 58.620 41.667 0.00 0.00 0.00 2.59
24 25 4.213513 GGAGAGCAAATGATGGAAAGGAT 58.786 43.478 0.00 0.00 0.00 3.24
25 26 3.624777 GGAGAGCAAATGATGGAAAGGA 58.375 45.455 0.00 0.00 0.00 3.36
26 27 2.692041 GGGAGAGCAAATGATGGAAAGG 59.308 50.000 0.00 0.00 0.00 3.11
27 28 3.629087 AGGGAGAGCAAATGATGGAAAG 58.371 45.455 0.00 0.00 0.00 2.62
28 29 3.267812 AGAGGGAGAGCAAATGATGGAAA 59.732 43.478 0.00 0.00 0.00 3.13
29 30 2.848694 AGAGGGAGAGCAAATGATGGAA 59.151 45.455 0.00 0.00 0.00 3.53
30 31 2.437281 GAGAGGGAGAGCAAATGATGGA 59.563 50.000 0.00 0.00 0.00 3.41
31 32 2.438763 AGAGAGGGAGAGCAAATGATGG 59.561 50.000 0.00 0.00 0.00 3.51
32 33 3.731089 GAGAGAGGGAGAGCAAATGATG 58.269 50.000 0.00 0.00 0.00 3.07
33 34 2.364970 CGAGAGAGGGAGAGCAAATGAT 59.635 50.000 0.00 0.00 0.00 2.45
34 35 1.753649 CGAGAGAGGGAGAGCAAATGA 59.246 52.381 0.00 0.00 0.00 2.57
35 36 1.480137 ACGAGAGAGGGAGAGCAAATG 59.520 52.381 0.00 0.00 0.00 2.32
36 37 1.859302 ACGAGAGAGGGAGAGCAAAT 58.141 50.000 0.00 0.00 0.00 2.32
37 38 1.633774 AACGAGAGAGGGAGAGCAAA 58.366 50.000 0.00 0.00 0.00 3.68
38 39 1.546476 GAAACGAGAGAGGGAGAGCAA 59.454 52.381 0.00 0.00 0.00 3.91
39 40 1.178276 GAAACGAGAGAGGGAGAGCA 58.822 55.000 0.00 0.00 0.00 4.26
40 41 1.404035 GAGAAACGAGAGAGGGAGAGC 59.596 57.143 0.00 0.00 0.00 4.09
41 42 2.943033 GAGAGAAACGAGAGAGGGAGAG 59.057 54.545 0.00 0.00 0.00 3.20
42 43 2.574369 AGAGAGAAACGAGAGAGGGAGA 59.426 50.000 0.00 0.00 0.00 3.71
43 44 2.999331 AGAGAGAAACGAGAGAGGGAG 58.001 52.381 0.00 0.00 0.00 4.30
44 45 4.571369 TTAGAGAGAAACGAGAGAGGGA 57.429 45.455 0.00 0.00 0.00 4.20
45 46 4.459685 TGTTTAGAGAGAAACGAGAGAGGG 59.540 45.833 0.00 0.00 41.36 4.30
46 47 5.413213 TCTGTTTAGAGAGAAACGAGAGAGG 59.587 44.000 0.00 0.00 41.36 3.69
47 48 6.148811 AGTCTGTTTAGAGAGAAACGAGAGAG 59.851 42.308 0.00 0.00 41.36 3.20
48 49 5.998981 AGTCTGTTTAGAGAGAAACGAGAGA 59.001 40.000 0.00 0.00 41.36 3.10
49 50 6.249035 AGTCTGTTTAGAGAGAAACGAGAG 57.751 41.667 0.00 0.00 41.36 3.20
50 51 6.262496 TCAAGTCTGTTTAGAGAGAAACGAGA 59.738 38.462 0.00 0.00 41.36 4.04
51 52 6.361214 GTCAAGTCTGTTTAGAGAGAAACGAG 59.639 42.308 0.00 0.00 41.36 4.18
52 53 6.207213 GTCAAGTCTGTTTAGAGAGAAACGA 58.793 40.000 0.00 0.00 41.36 3.85
53 54 5.115773 CGTCAAGTCTGTTTAGAGAGAAACG 59.884 44.000 0.00 0.00 41.36 3.60
54 55 6.207213 TCGTCAAGTCTGTTTAGAGAGAAAC 58.793 40.000 0.00 0.00 39.35 2.78
55 56 6.387041 TCGTCAAGTCTGTTTAGAGAGAAA 57.613 37.500 0.00 0.00 32.48 2.52
56 57 5.563085 GCTCGTCAAGTCTGTTTAGAGAGAA 60.563 44.000 0.00 0.00 32.48 2.87
57 58 4.083217 GCTCGTCAAGTCTGTTTAGAGAGA 60.083 45.833 0.00 0.00 32.48 3.10
58 59 4.162812 GCTCGTCAAGTCTGTTTAGAGAG 58.837 47.826 0.00 0.00 32.48 3.20
59 60 3.365064 CGCTCGTCAAGTCTGTTTAGAGA 60.365 47.826 0.00 0.00 32.48 3.10
60 61 2.911723 CGCTCGTCAAGTCTGTTTAGAG 59.088 50.000 0.00 0.00 32.48 2.43
61 62 2.551032 TCGCTCGTCAAGTCTGTTTAGA 59.449 45.455 0.00 0.00 0.00 2.10
62 63 2.657372 GTCGCTCGTCAAGTCTGTTTAG 59.343 50.000 0.00 0.00 0.00 1.85
63 64 2.033675 TGTCGCTCGTCAAGTCTGTTTA 59.966 45.455 0.00 0.00 0.00 2.01
64 65 1.202371 TGTCGCTCGTCAAGTCTGTTT 60.202 47.619 0.00 0.00 0.00 2.83
65 66 0.384309 TGTCGCTCGTCAAGTCTGTT 59.616 50.000 0.00 0.00 0.00 3.16
66 67 0.039978 CTGTCGCTCGTCAAGTCTGT 60.040 55.000 0.00 0.00 0.00 3.41
67 68 1.340657 GCTGTCGCTCGTCAAGTCTG 61.341 60.000 0.00 0.00 0.00 3.51
68 69 1.081108 GCTGTCGCTCGTCAAGTCT 60.081 57.895 0.00 0.00 0.00 3.24
69 70 2.429351 CGCTGTCGCTCGTCAAGTC 61.429 63.158 0.00 0.00 0.00 3.01
70 71 2.429236 CGCTGTCGCTCGTCAAGT 60.429 61.111 0.00 0.00 0.00 3.16
80 81 1.521749 GAAGACGTATCGCGCTGTCG 61.522 60.000 5.56 7.70 46.11 4.35
81 82 0.522705 TGAAGACGTATCGCGCTGTC 60.523 55.000 5.56 6.49 46.11 3.51
82 83 0.100682 ATGAAGACGTATCGCGCTGT 59.899 50.000 5.56 0.00 46.11 4.40
83 84 0.500178 CATGAAGACGTATCGCGCTG 59.500 55.000 5.56 0.00 46.11 5.18
84 85 0.100682 ACATGAAGACGTATCGCGCT 59.899 50.000 5.56 0.00 46.11 5.92
85 86 0.921347 AACATGAAGACGTATCGCGC 59.079 50.000 0.00 0.00 46.11 6.86
87 88 4.546456 CGAAGAAACATGAAGACGTATCGC 60.546 45.833 0.00 0.00 0.00 4.58
88 89 4.791676 TCGAAGAAACATGAAGACGTATCG 59.208 41.667 0.00 0.00 0.00 2.92
89 90 6.028368 TCTCGAAGAAACATGAAGACGTATC 58.972 40.000 0.00 0.00 34.09 2.24
90 91 5.950883 TCTCGAAGAAACATGAAGACGTAT 58.049 37.500 0.00 0.00 34.09 3.06
91 92 5.366829 TCTCGAAGAAACATGAAGACGTA 57.633 39.130 0.00 0.00 34.09 3.57
92 93 4.238761 TCTCGAAGAAACATGAAGACGT 57.761 40.909 0.00 0.00 34.09 4.34
93 94 5.576337 TTTCTCGAAGAAACATGAAGACG 57.424 39.130 0.00 0.00 39.13 4.18
103 104 3.312421 CAGTGCAAGGTTTCTCGAAGAAA 59.688 43.478 0.00 6.10 41.51 2.52
104 105 2.872245 CAGTGCAAGGTTTCTCGAAGAA 59.128 45.455 0.00 0.00 34.09 2.52
105 106 2.483876 CAGTGCAAGGTTTCTCGAAGA 58.516 47.619 0.00 0.00 0.00 2.87
106 107 1.069636 GCAGTGCAAGGTTTCTCGAAG 60.070 52.381 11.09 0.00 0.00 3.79
107 108 0.944386 GCAGTGCAAGGTTTCTCGAA 59.056 50.000 11.09 0.00 0.00 3.71
108 109 0.106708 AGCAGTGCAAGGTTTCTCGA 59.893 50.000 19.20 0.00 0.00 4.04
109 110 0.236711 CAGCAGTGCAAGGTTTCTCG 59.763 55.000 19.20 0.00 0.00 4.04
110 111 1.534595 CTCAGCAGTGCAAGGTTTCTC 59.465 52.381 19.20 0.00 0.00 2.87
111 112 1.602311 CTCAGCAGTGCAAGGTTTCT 58.398 50.000 19.20 0.00 0.00 2.52
112 113 0.039708 GCTCAGCAGTGCAAGGTTTC 60.040 55.000 19.20 0.00 34.50 2.78
113 114 1.458639 GGCTCAGCAGTGCAAGGTTT 61.459 55.000 19.20 0.00 36.01 3.27
114 115 1.900498 GGCTCAGCAGTGCAAGGTT 60.900 57.895 19.20 0.00 36.01 3.50
115 116 2.282040 GGCTCAGCAGTGCAAGGT 60.282 61.111 19.20 0.00 36.01 3.50
116 117 2.281970 TGGCTCAGCAGTGCAAGG 60.282 61.111 19.20 6.50 36.01 3.61
117 118 0.321034 TAGTGGCTCAGCAGTGCAAG 60.321 55.000 19.20 15.02 36.01 4.01
118 119 0.321034 CTAGTGGCTCAGCAGTGCAA 60.321 55.000 19.20 3.78 36.01 4.08
119 120 1.294459 CTAGTGGCTCAGCAGTGCA 59.706 57.895 19.20 0.00 36.01 4.57
120 121 2.105466 GCTAGTGGCTCAGCAGTGC 61.105 63.158 7.13 7.13 37.73 4.40
121 122 1.294459 TGCTAGTGGCTCAGCAGTG 59.706 57.895 0.00 0.00 42.68 3.66
122 123 3.797331 TGCTAGTGGCTCAGCAGT 58.203 55.556 0.00 0.00 42.68 4.40
126 127 1.814586 GCTGCTGCTAGTGGCTCAG 60.815 63.158 8.53 13.90 41.46 3.35
127 128 2.267006 GCTGCTGCTAGTGGCTCA 59.733 61.111 8.53 0.00 42.39 4.26
128 129 1.814586 CTGCTGCTGCTAGTGGCTC 60.815 63.158 17.00 0.00 42.39 4.70
129 130 2.268280 CTGCTGCTGCTAGTGGCT 59.732 61.111 17.00 0.00 42.39 4.75
130 131 3.507009 GCTGCTGCTGCTAGTGGC 61.507 66.667 22.10 9.14 40.48 5.01
131 132 2.823147 GGCTGCTGCTGCTAGTGG 60.823 66.667 26.79 3.49 40.48 4.00
132 133 1.673337 TTGGCTGCTGCTGCTAGTG 60.673 57.895 26.79 5.75 40.48 2.74
133 134 1.673665 GTTGGCTGCTGCTGCTAGT 60.674 57.895 26.79 0.00 40.48 2.57
134 135 2.747822 CGTTGGCTGCTGCTGCTAG 61.748 63.158 26.79 12.70 40.48 3.42
135 136 2.743538 CGTTGGCTGCTGCTGCTA 60.744 61.111 26.79 20.56 40.48 3.49
136 137 4.943252 ACGTTGGCTGCTGCTGCT 62.943 61.111 26.79 7.80 40.48 4.24
137 138 4.695231 CACGTTGGCTGCTGCTGC 62.695 66.667 21.42 21.42 39.59 5.25
138 139 4.034258 CCACGTTGGCTGCTGCTG 62.034 66.667 15.64 0.77 39.59 4.41
139 140 3.772853 TTCCACGTTGGCTGCTGCT 62.773 57.895 15.64 0.00 37.47 4.24
140 141 2.737932 CTTTCCACGTTGGCTGCTGC 62.738 60.000 7.10 7.10 37.47 5.25
141 142 1.283793 CTTTCCACGTTGGCTGCTG 59.716 57.895 0.00 0.00 37.47 4.41
142 143 0.107831 TACTTTCCACGTTGGCTGCT 59.892 50.000 0.00 0.00 37.47 4.24
143 144 0.237498 GTACTTTCCACGTTGGCTGC 59.763 55.000 0.00 0.00 37.47 5.25
144 145 1.588674 TGTACTTTCCACGTTGGCTG 58.411 50.000 0.00 0.00 37.47 4.85
145 146 2.335316 TTGTACTTTCCACGTTGGCT 57.665 45.000 0.00 0.00 37.47 4.75
146 147 2.857104 GCTTTGTACTTTCCACGTTGGC 60.857 50.000 0.00 0.00 37.47 4.52
147 148 2.601266 CGCTTTGTACTTTCCACGTTGG 60.601 50.000 0.00 0.00 39.43 3.77
148 149 2.601266 CCGCTTTGTACTTTCCACGTTG 60.601 50.000 0.00 0.00 0.00 4.10
149 150 1.600485 CCGCTTTGTACTTTCCACGTT 59.400 47.619 0.00 0.00 0.00 3.99
150 151 1.223187 CCGCTTTGTACTTTCCACGT 58.777 50.000 0.00 0.00 0.00 4.49
151 152 0.515564 CCCGCTTTGTACTTTCCACG 59.484 55.000 0.00 0.00 0.00 4.94
152 153 0.240145 GCCCGCTTTGTACTTTCCAC 59.760 55.000 0.00 0.00 0.00 4.02
153 154 0.891904 GGCCCGCTTTGTACTTTCCA 60.892 55.000 0.00 0.00 0.00 3.53
154 155 1.592400 GGGCCCGCTTTGTACTTTCC 61.592 60.000 5.69 0.00 0.00 3.13
155 156 0.891904 TGGGCCCGCTTTGTACTTTC 60.892 55.000 19.37 0.00 0.00 2.62
156 157 1.151908 TGGGCCCGCTTTGTACTTT 59.848 52.632 19.37 0.00 0.00 2.66
157 158 1.602605 GTGGGCCCGCTTTGTACTT 60.603 57.895 28.79 0.00 0.00 2.24
158 159 2.033602 GTGGGCCCGCTTTGTACT 59.966 61.111 28.79 0.00 0.00 2.73
159 160 1.248101 ATTGTGGGCCCGCTTTGTAC 61.248 55.000 34.52 17.62 0.00 2.90
160 161 0.540830 AATTGTGGGCCCGCTTTGTA 60.541 50.000 34.52 12.85 0.00 2.41
161 162 1.815817 GAATTGTGGGCCCGCTTTGT 61.816 55.000 34.52 17.86 0.00 2.83
162 163 1.079888 GAATTGTGGGCCCGCTTTG 60.080 57.895 34.52 0.00 0.00 2.77
163 164 0.039035 TAGAATTGTGGGCCCGCTTT 59.961 50.000 34.52 26.60 0.00 3.51
164 165 0.258774 ATAGAATTGTGGGCCCGCTT 59.741 50.000 34.52 22.41 0.00 4.68
165 166 1.136828 TATAGAATTGTGGGCCCGCT 58.863 50.000 34.52 16.52 0.00 5.52
166 167 1.812571 CATATAGAATTGTGGGCCCGC 59.187 52.381 29.34 29.34 0.00 6.13
167 168 3.074412 GACATATAGAATTGTGGGCCCG 58.926 50.000 19.37 0.00 0.00 6.13
168 169 4.098914 TGACATATAGAATTGTGGGCCC 57.901 45.455 17.59 17.59 0.00 5.80
169 170 5.048504 CACATGACATATAGAATTGTGGGCC 60.049 44.000 0.00 0.00 31.67 5.80
170 171 5.764686 TCACATGACATATAGAATTGTGGGC 59.235 40.000 0.00 0.00 35.05 5.36
171 172 7.518848 CGTTCACATGACATATAGAATTGTGGG 60.519 40.741 0.00 0.00 35.05 4.61
172 173 7.347448 CGTTCACATGACATATAGAATTGTGG 58.653 38.462 0.00 0.00 35.05 4.17
173 174 6.847792 GCGTTCACATGACATATAGAATTGTG 59.152 38.462 0.00 0.00 35.49 3.33
174 175 6.292328 CGCGTTCACATGACATATAGAATTGT 60.292 38.462 0.00 0.00 0.00 2.71
175 176 6.067039 CGCGTTCACATGACATATAGAATTG 58.933 40.000 0.00 0.00 0.00 2.32
176 177 5.333339 GCGCGTTCACATGACATATAGAATT 60.333 40.000 8.43 0.00 0.00 2.17
177 178 4.150627 GCGCGTTCACATGACATATAGAAT 59.849 41.667 8.43 0.00 0.00 2.40
178 179 3.489416 GCGCGTTCACATGACATATAGAA 59.511 43.478 8.43 0.00 0.00 2.10
179 180 3.049912 GCGCGTTCACATGACATATAGA 58.950 45.455 8.43 0.00 0.00 1.98
180 181 2.155732 GGCGCGTTCACATGACATATAG 59.844 50.000 8.43 0.00 0.00 1.31
181 182 2.131972 GGCGCGTTCACATGACATATA 58.868 47.619 8.43 0.00 0.00 0.86
182 183 0.937304 GGCGCGTTCACATGACATAT 59.063 50.000 8.43 0.00 0.00 1.78
183 184 0.108377 AGGCGCGTTCACATGACATA 60.108 50.000 8.43 0.00 0.00 2.29
184 185 0.955428 AAGGCGCGTTCACATGACAT 60.955 50.000 10.00 0.00 0.00 3.06
185 186 1.163420 AAAGGCGCGTTCACATGACA 61.163 50.000 16.62 0.00 0.00 3.58
186 187 0.452784 GAAAGGCGCGTTCACATGAC 60.453 55.000 16.62 0.00 0.00 3.06
187 188 0.602638 AGAAAGGCGCGTTCACATGA 60.603 50.000 16.62 0.00 0.00 3.07
188 189 0.179215 GAGAAAGGCGCGTTCACATG 60.179 55.000 16.62 0.00 0.00 3.21
189 190 1.298859 GGAGAAAGGCGCGTTCACAT 61.299 55.000 16.62 0.00 0.00 3.21
190 191 1.959226 GGAGAAAGGCGCGTTCACA 60.959 57.895 16.62 0.00 0.00 3.58
191 192 2.861006 GGAGAAAGGCGCGTTCAC 59.139 61.111 16.62 12.80 0.00 3.18
192 193 2.501223 ATCGGAGAAAGGCGCGTTCA 62.501 55.000 16.62 0.00 43.58 3.18
193 194 1.753468 GATCGGAGAAAGGCGCGTTC 61.753 60.000 16.62 14.61 43.58 3.95
256 257 2.668279 CGCTTTCATTACCACCAAGTGC 60.668 50.000 0.00 0.00 31.34 4.40
257 258 2.811431 TCGCTTTCATTACCACCAAGTG 59.189 45.455 0.00 0.00 0.00 3.16
259 260 3.334691 TCTCGCTTTCATTACCACCAAG 58.665 45.455 0.00 0.00 0.00 3.61
263 264 2.094417 GTGCTCTCGCTTTCATTACCAC 59.906 50.000 0.00 0.00 36.97 4.16
264 265 2.346803 GTGCTCTCGCTTTCATTACCA 58.653 47.619 0.00 0.00 36.97 3.25
266 267 1.993370 ACGTGCTCTCGCTTTCATTAC 59.007 47.619 0.00 0.00 36.97 1.89
267 268 2.259618 GACGTGCTCTCGCTTTCATTA 58.740 47.619 0.00 0.00 36.97 1.90
269 270 0.737715 GGACGTGCTCTCGCTTTCAT 60.738 55.000 0.00 0.00 36.97 2.57
270 271 1.372997 GGACGTGCTCTCGCTTTCA 60.373 57.895 0.00 0.00 36.97 2.69
285 286 2.325857 GCATCTTCATGCGCGGAC 59.674 61.111 8.83 0.00 46.06 4.79
317 318 3.744940 TGGGAAGAAGCAGATTGGATT 57.255 42.857 0.00 0.00 0.00 3.01
344 345 0.994247 ATGTTGGGAGTGATGCAGGA 59.006 50.000 0.00 0.00 0.00 3.86
403 406 2.353208 CCACTGTGGCTAGTCTGAAGAC 60.353 54.545 14.87 2.06 45.08 3.01
405 408 1.066573 CCCACTGTGGCTAGTCTGAAG 60.067 57.143 21.47 0.00 35.79 3.02
406 409 0.976641 CCCACTGTGGCTAGTCTGAA 59.023 55.000 21.47 0.00 35.79 3.02
407 410 0.114364 TCCCACTGTGGCTAGTCTGA 59.886 55.000 21.47 8.36 35.79 3.27
408 411 0.534412 CTCCCACTGTGGCTAGTCTG 59.466 60.000 21.47 6.01 35.79 3.51
409 412 0.115349 ACTCCCACTGTGGCTAGTCT 59.885 55.000 21.47 3.44 35.79 3.24
410 413 1.848652 TACTCCCACTGTGGCTAGTC 58.151 55.000 26.56 0.00 35.79 2.59
411 414 1.900486 GTTACTCCCACTGTGGCTAGT 59.100 52.381 26.22 26.22 35.79 2.57
412 415 2.180276 AGTTACTCCCACTGTGGCTAG 58.820 52.381 21.47 20.51 35.79 3.42
413 416 2.320681 AGTTACTCCCACTGTGGCTA 57.679 50.000 21.47 10.31 35.79 3.93
414 417 1.348036 GAAGTTACTCCCACTGTGGCT 59.652 52.381 21.47 8.83 35.79 4.75
415 418 1.809684 GAAGTTACTCCCACTGTGGC 58.190 55.000 21.47 6.54 35.79 5.01
416 419 1.337823 CCGAAGTTACTCCCACTGTGG 60.338 57.143 20.01 20.01 37.25 4.17
417 420 1.343465 ACCGAAGTTACTCCCACTGTG 59.657 52.381 0.00 0.00 0.00 3.66
418 421 1.713297 ACCGAAGTTACTCCCACTGT 58.287 50.000 0.00 0.00 0.00 3.55
419 422 2.824341 ACTACCGAAGTTACTCCCACTG 59.176 50.000 0.00 0.00 33.35 3.66
420 423 3.166560 ACTACCGAAGTTACTCCCACT 57.833 47.619 0.00 0.00 33.35 4.00
421 424 4.218417 TGTTACTACCGAAGTTACTCCCAC 59.782 45.833 8.00 0.00 39.80 4.61
422 425 4.406456 TGTTACTACCGAAGTTACTCCCA 58.594 43.478 8.00 0.00 39.80 4.37
423 426 5.586339 GATGTTACTACCGAAGTTACTCCC 58.414 45.833 8.00 0.00 39.80 4.30
424 427 5.065218 TCGATGTTACTACCGAAGTTACTCC 59.935 44.000 8.00 1.54 39.80 3.85
425 428 6.111768 TCGATGTTACTACCGAAGTTACTC 57.888 41.667 8.00 4.02 39.80 2.59
426 429 5.645497 ACTCGATGTTACTACCGAAGTTACT 59.355 40.000 8.00 0.00 39.80 2.24
427 430 5.873732 ACTCGATGTTACTACCGAAGTTAC 58.126 41.667 0.00 0.00 39.80 2.50
428 431 5.065218 GGACTCGATGTTACTACCGAAGTTA 59.935 44.000 0.00 0.00 39.80 2.24
429 432 4.142513 GGACTCGATGTTACTACCGAAGTT 60.143 45.833 0.00 0.00 39.80 2.66
430 433 3.376546 GGACTCGATGTTACTACCGAAGT 59.623 47.826 0.00 0.00 42.62 3.01
431 434 3.376234 TGGACTCGATGTTACTACCGAAG 59.624 47.826 0.00 0.00 0.00 3.79
432 435 3.346315 TGGACTCGATGTTACTACCGAA 58.654 45.455 0.00 0.00 0.00 4.30
433 436 2.989909 TGGACTCGATGTTACTACCGA 58.010 47.619 0.00 0.00 0.00 4.69
434 437 3.128242 AGTTGGACTCGATGTTACTACCG 59.872 47.826 0.00 0.00 0.00 4.02
435 438 4.670347 GAGTTGGACTCGATGTTACTACC 58.330 47.826 0.00 0.00 35.28 3.18
466 469 5.651576 TCATTAACTCATTGCCACATAAGCA 59.348 36.000 0.00 0.00 38.81 3.91
467 470 6.135290 TCATTAACTCATTGCCACATAAGC 57.865 37.500 0.00 0.00 0.00 3.09
468 471 6.543465 TCCTCATTAACTCATTGCCACATAAG 59.457 38.462 0.00 0.00 0.00 1.73
469 472 6.422333 TCCTCATTAACTCATTGCCACATAA 58.578 36.000 0.00 0.00 0.00 1.90
470 473 6.000246 TCCTCATTAACTCATTGCCACATA 58.000 37.500 0.00 0.00 0.00 2.29
471 474 4.858850 TCCTCATTAACTCATTGCCACAT 58.141 39.130 0.00 0.00 0.00 3.21
472 475 4.019411 TCTCCTCATTAACTCATTGCCACA 60.019 41.667 0.00 0.00 0.00 4.17
473 476 4.517285 TCTCCTCATTAACTCATTGCCAC 58.483 43.478 0.00 0.00 0.00 5.01
474 477 4.471025 TCTCTCCTCATTAACTCATTGCCA 59.529 41.667 0.00 0.00 0.00 4.92
475 478 5.028549 TCTCTCCTCATTAACTCATTGCC 57.971 43.478 0.00 0.00 0.00 4.52
476 479 6.054295 ACATCTCTCCTCATTAACTCATTGC 58.946 40.000 0.00 0.00 0.00 3.56
477 480 8.420222 ACTACATCTCTCCTCATTAACTCATTG 58.580 37.037 0.00 0.00 0.00 2.82
478 481 8.546083 ACTACATCTCTCCTCATTAACTCATT 57.454 34.615 0.00 0.00 0.00 2.57
479 482 9.073475 GTACTACATCTCTCCTCATTAACTCAT 57.927 37.037 0.00 0.00 0.00 2.90
480 483 8.275758 AGTACTACATCTCTCCTCATTAACTCA 58.724 37.037 0.00 0.00 0.00 3.41
481 484 8.685838 AGTACTACATCTCTCCTCATTAACTC 57.314 38.462 0.00 0.00 0.00 3.01
482 485 9.787435 CTAGTACTACATCTCTCCTCATTAACT 57.213 37.037 0.00 0.00 0.00 2.24
483 486 9.563748 ACTAGTACTACATCTCTCCTCATTAAC 57.436 37.037 0.00 0.00 0.00 2.01
486 489 9.563748 GTTACTAGTACTACATCTCTCCTCATT 57.436 37.037 0.91 0.00 0.00 2.57
487 490 8.940982 AGTTACTAGTACTACATCTCTCCTCAT 58.059 37.037 0.91 0.00 0.00 2.90
488 491 8.321621 AGTTACTAGTACTACATCTCTCCTCA 57.678 38.462 0.91 0.00 0.00 3.86
491 494 8.992073 GCTAAGTTACTAGTACTACATCTCTCC 58.008 40.741 0.91 0.00 0.00 3.71
492 495 9.768662 AGCTAAGTTACTAGTACTACATCTCTC 57.231 37.037 0.91 0.00 0.00 3.20
511 514 8.118976 TGTGATGTTACAGTAACTAGCTAAGT 57.881 34.615 21.56 0.00 41.49 2.24
512 515 9.025020 CATGTGATGTTACAGTAACTAGCTAAG 57.975 37.037 21.56 6.36 39.38 2.18
513 516 8.528643 ACATGTGATGTTACAGTAACTAGCTAA 58.471 33.333 21.56 3.59 41.63 3.09
514 517 8.063200 ACATGTGATGTTACAGTAACTAGCTA 57.937 34.615 21.56 4.25 41.63 3.32
515 518 6.936279 ACATGTGATGTTACAGTAACTAGCT 58.064 36.000 21.56 6.57 41.63 3.32
516 519 6.255887 GGACATGTGATGTTACAGTAACTAGC 59.744 42.308 21.56 12.59 45.03 3.42
517 520 6.757010 GGGACATGTGATGTTACAGTAACTAG 59.243 42.308 21.56 8.25 45.03 2.57
518 521 6.211785 TGGGACATGTGATGTTACAGTAACTA 59.788 38.462 21.56 10.50 45.03 2.24
519 522 5.012664 TGGGACATGTGATGTTACAGTAACT 59.987 40.000 21.56 9.41 45.03 2.24
520 523 5.242434 TGGGACATGTGATGTTACAGTAAC 58.758 41.667 15.58 15.58 45.03 2.50
521 524 5.491323 TGGGACATGTGATGTTACAGTAA 57.509 39.130 1.15 0.00 45.03 2.24
522 525 5.491323 TTGGGACATGTGATGTTACAGTA 57.509 39.130 1.15 0.00 45.03 2.74
523 526 4.365514 TTGGGACATGTGATGTTACAGT 57.634 40.909 1.15 0.00 45.03 3.55
524 527 4.439153 GCATTGGGACATGTGATGTTACAG 60.439 45.833 1.15 0.00 45.03 2.74
525 528 3.443329 GCATTGGGACATGTGATGTTACA 59.557 43.478 1.15 0.00 45.03 2.41
526 529 3.443329 TGCATTGGGACATGTGATGTTAC 59.557 43.478 1.15 0.00 45.03 2.50
527 530 3.694926 TGCATTGGGACATGTGATGTTA 58.305 40.909 1.15 0.00 45.03 2.41
528 531 2.527497 TGCATTGGGACATGTGATGTT 58.473 42.857 1.15 0.00 45.03 2.71
530 533 3.812156 ATTGCATTGGGACATGTGATG 57.188 42.857 1.15 3.48 39.30 3.07
531 534 5.141910 TCATATTGCATTGGGACATGTGAT 58.858 37.500 1.15 0.00 39.30 3.06
532 535 4.534797 TCATATTGCATTGGGACATGTGA 58.465 39.130 1.15 0.00 39.30 3.58
533 536 4.922471 TCATATTGCATTGGGACATGTG 57.078 40.909 1.15 0.00 39.30 3.21
534 537 5.836898 AGATTCATATTGCATTGGGACATGT 59.163 36.000 0.00 0.00 39.30 3.21
535 538 6.340962 AGATTCATATTGCATTGGGACATG 57.659 37.500 0.00 0.00 39.30 3.21
536 539 9.758021 TTATAGATTCATATTGCATTGGGACAT 57.242 29.630 0.00 0.00 39.30 3.06
537 540 9.758021 ATTATAGATTCATATTGCATTGGGACA 57.242 29.630 0.00 0.00 0.00 4.02
539 542 9.758021 ACATTATAGATTCATATTGCATTGGGA 57.242 29.630 0.00 0.00 0.00 4.37
561 564 9.439500 AACATGCAAAGCTTCATTTATTACATT 57.561 25.926 0.00 0.00 0.00 2.71
563 566 9.352784 GTAACATGCAAAGCTTCATTTATTACA 57.647 29.630 0.00 0.00 0.00 2.41
564 567 8.807581 GGTAACATGCAAAGCTTCATTTATTAC 58.192 33.333 0.00 8.32 0.00 1.89
565 568 8.526978 TGGTAACATGCAAAGCTTCATTTATTA 58.473 29.630 0.00 0.00 46.17 0.98
566 569 7.385267 TGGTAACATGCAAAGCTTCATTTATT 58.615 30.769 0.00 0.00 46.17 1.40
567 570 6.934056 TGGTAACATGCAAAGCTTCATTTAT 58.066 32.000 0.00 0.00 46.17 1.40
568 571 6.338214 TGGTAACATGCAAAGCTTCATTTA 57.662 33.333 0.00 0.18 46.17 1.40
569 572 5.212532 TGGTAACATGCAAAGCTTCATTT 57.787 34.783 0.00 1.04 46.17 2.32
570 573 4.870123 TGGTAACATGCAAAGCTTCATT 57.130 36.364 0.00 0.00 46.17 2.57
585 588 5.105228 TGGGTAGTAGCATAAGTGTGGTAAC 60.105 44.000 1.13 0.00 34.25 2.50
586 589 5.024785 TGGGTAGTAGCATAAGTGTGGTAA 58.975 41.667 1.13 0.00 34.25 2.85
587 590 4.403432 GTGGGTAGTAGCATAAGTGTGGTA 59.597 45.833 1.13 0.00 0.00 3.25
588 591 3.197116 GTGGGTAGTAGCATAAGTGTGGT 59.803 47.826 1.13 0.00 0.00 4.16
589 592 3.451178 AGTGGGTAGTAGCATAAGTGTGG 59.549 47.826 1.13 0.00 0.00 4.17
590 593 4.737855 AGTGGGTAGTAGCATAAGTGTG 57.262 45.455 1.13 0.00 0.00 3.82
591 594 6.610020 TCAATAGTGGGTAGTAGCATAAGTGT 59.390 38.462 1.13 0.00 0.00 3.55
592 595 7.050970 TCAATAGTGGGTAGTAGCATAAGTG 57.949 40.000 1.13 0.00 0.00 3.16
593 596 6.267928 CCTCAATAGTGGGTAGTAGCATAAGT 59.732 42.308 1.13 0.00 0.00 2.24
594 597 6.267928 ACCTCAATAGTGGGTAGTAGCATAAG 59.732 42.308 1.13 0.00 32.64 1.73
595 598 6.141083 ACCTCAATAGTGGGTAGTAGCATAA 58.859 40.000 1.13 0.00 32.64 1.90
596 599 5.712752 ACCTCAATAGTGGGTAGTAGCATA 58.287 41.667 1.13 0.00 32.64 3.14
597 600 4.557705 ACCTCAATAGTGGGTAGTAGCAT 58.442 43.478 1.13 0.00 32.64 3.79
598 601 3.990369 ACCTCAATAGTGGGTAGTAGCA 58.010 45.455 1.13 0.00 32.64 3.49
599 602 5.708877 CTACCTCAATAGTGGGTAGTAGC 57.291 47.826 20.63 0.00 40.39 3.58
603 606 7.598759 ATGTTACTACCTCAATAGTGGGTAG 57.401 40.000 24.28 24.28 45.24 3.18
604 607 8.505246 TCTATGTTACTACCTCAATAGTGGGTA 58.495 37.037 9.29 9.29 36.09 3.69
605 608 7.359849 TCTATGTTACTACCTCAATAGTGGGT 58.640 38.462 8.14 8.14 36.09 4.51
606 609 7.506261 ACTCTATGTTACTACCTCAATAGTGGG 59.494 40.741 0.00 0.00 36.09 4.61
607 610 8.466617 ACTCTATGTTACTACCTCAATAGTGG 57.533 38.462 0.00 0.00 36.09 4.00
613 616 9.964354 TGTTAGTACTCTATGTTACTACCTCAA 57.036 33.333 0.00 0.00 0.00 3.02
616 619 9.352191 CCATGTTAGTACTCTATGTTACTACCT 57.648 37.037 0.00 0.00 0.00 3.08
617 620 8.574737 CCCATGTTAGTACTCTATGTTACTACC 58.425 40.741 0.00 0.00 0.00 3.18
618 621 8.081025 GCCCATGTTAGTACTCTATGTTACTAC 58.919 40.741 0.00 0.00 0.00 2.73
619 622 7.781219 TGCCCATGTTAGTACTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
620 623 6.610020 TGCCCATGTTAGTACTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
621 624 6.812998 TGCCCATGTTAGTACTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
622 625 7.441836 CATGCCCATGTTAGTACTCTATGTTA 58.558 38.462 0.00 0.00 34.23 2.41
623 626 5.950544 TGCCCATGTTAGTACTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
624 627 5.858381 CATGCCCATGTTAGTACTCTATGT 58.142 41.667 0.00 0.00 34.23 2.29
638 641 5.858381 ACATAGAGTAGTAACATGCCCATG 58.142 41.667 6.71 6.71 44.15 3.66
639 642 6.500589 AACATAGAGTAGTAACATGCCCAT 57.499 37.500 0.00 0.00 0.00 4.00
640 643 5.950544 AACATAGAGTAGTAACATGCCCA 57.049 39.130 0.00 0.00 0.00 5.36
641 644 7.052142 AGTAACATAGAGTAGTAACATGCCC 57.948 40.000 0.00 0.00 0.00 5.36
642 645 8.081025 GGTAGTAACATAGAGTAGTAACATGCC 58.919 40.741 0.00 0.00 0.00 4.40
643 646 8.081025 GGGTAGTAACATAGAGTAGTAACATGC 58.919 40.741 0.00 0.00 0.00 4.06
644 647 9.128404 TGGGTAGTAACATAGAGTAGTAACATG 57.872 37.037 0.00 0.00 0.00 3.21
645 648 9.878737 ATGGGTAGTAACATAGAGTAGTAACAT 57.121 33.333 0.00 0.00 0.00 2.71
646 649 9.705103 AATGGGTAGTAACATAGAGTAGTAACA 57.295 33.333 0.00 0.00 0.00 2.41
647 650 9.962783 CAATGGGTAGTAACATAGAGTAGTAAC 57.037 37.037 0.00 0.00 0.00 2.50
648 651 9.705103 ACAATGGGTAGTAACATAGAGTAGTAA 57.295 33.333 0.00 0.00 0.00 2.24
649 652 9.128404 CACAATGGGTAGTAACATAGAGTAGTA 57.872 37.037 0.00 0.00 0.00 1.82
650 653 7.069578 CCACAATGGGTAGTAACATAGAGTAGT 59.930 40.741 0.00 0.00 32.67 2.73
651 654 7.434492 CCACAATGGGTAGTAACATAGAGTAG 58.566 42.308 0.00 0.00 32.67 2.57
652 655 6.183360 GCCACAATGGGTAGTAACATAGAGTA 60.183 42.308 0.00 0.00 38.19 2.59
653 656 5.396436 GCCACAATGGGTAGTAACATAGAGT 60.396 44.000 0.00 0.00 38.19 3.24
654 657 5.057149 GCCACAATGGGTAGTAACATAGAG 58.943 45.833 0.00 0.00 38.19 2.43
655 658 5.031066 GCCACAATGGGTAGTAACATAGA 57.969 43.478 0.00 0.00 38.19 1.98
667 670 0.107017 CTGGGACTAGCCACAATGGG 60.107 60.000 5.70 0.00 38.19 4.00
668 671 0.107017 CCTGGGACTAGCCACAATGG 60.107 60.000 5.70 0.00 41.55 3.16
669 672 0.620556 ACCTGGGACTAGCCACAATG 59.379 55.000 0.00 0.00 38.95 2.82
670 673 1.282157 GAACCTGGGACTAGCCACAAT 59.718 52.381 0.00 0.00 38.95 2.71
671 674 0.690762 GAACCTGGGACTAGCCACAA 59.309 55.000 0.00 0.00 38.95 3.33
672 675 1.198759 GGAACCTGGGACTAGCCACA 61.199 60.000 0.00 0.00 38.95 4.17
673 676 0.910088 AGGAACCTGGGACTAGCCAC 60.910 60.000 0.00 0.00 38.95 5.01
674 677 0.178873 AAGGAACCTGGGACTAGCCA 60.179 55.000 0.00 0.00 38.95 4.75
675 678 0.992695 AAAGGAACCTGGGACTAGCC 59.007 55.000 0.00 0.00 0.00 3.93
676 679 1.340114 CCAAAGGAACCTGGGACTAGC 60.340 57.143 0.00 0.00 0.00 3.42
677 680 2.789409 CCAAAGGAACCTGGGACTAG 57.211 55.000 0.00 0.00 0.00 2.57
694 697 1.419762 TCAGTACTGCAAGCTTTCCCA 59.580 47.619 18.45 0.00 37.60 4.37
696 699 2.772287 AGTCAGTACTGCAAGCTTTCC 58.228 47.619 18.45 0.00 37.60 3.13
701 704 0.519077 GGCAAGTCAGTACTGCAAGC 59.481 55.000 18.45 17.04 37.60 4.01
766 778 4.778143 GTCGAATGTGGGCCCGCT 62.778 66.667 34.52 17.34 0.00 5.52
904 943 1.379309 GGGCCCCAAAAGCGTATCA 60.379 57.895 12.23 0.00 0.00 2.15
954 1007 1.150536 TTGGCCGGAAAAGAGCACT 59.849 52.632 5.05 0.00 0.00 4.40
955 1008 1.285950 GTTGGCCGGAAAAGAGCAC 59.714 57.895 5.05 0.00 0.00 4.40
994 1047 1.972795 AGCGGGATTAAATAGGCGGTA 59.027 47.619 0.00 0.00 0.00 4.02
1168 1242 4.988598 CGGCACCCTGTTGTCGCT 62.989 66.667 0.00 0.00 37.86 4.93
1172 1246 2.113139 CCTTCGGCACCCTGTTGT 59.887 61.111 0.00 0.00 0.00 3.32
1181 1255 4.802051 GCATGCTCCCCTTCGGCA 62.802 66.667 11.37 0.00 40.32 5.69
1536 1709 2.989196 GCAGCAGCGAGAAGATCAT 58.011 52.632 0.00 0.00 0.00 2.45
1620 2107 0.734889 GCAGCGGCAAACATATCAGT 59.265 50.000 3.18 0.00 40.72 3.41
1678 2165 1.202533 ACACAACCTGAAGACCAGACG 60.203 52.381 0.00 0.00 45.78 4.18
1713 2204 1.851666 GCACACAACACAATCAAACCG 59.148 47.619 0.00 0.00 0.00 4.44
1727 2218 1.409790 AGTACCGTACACAAGCACACA 59.590 47.619 11.26 0.00 0.00 3.72
1728 2219 1.790623 CAGTACCGTACACAAGCACAC 59.209 52.381 11.26 0.00 0.00 3.82
1729 2220 1.409790 ACAGTACCGTACACAAGCACA 59.590 47.619 11.26 0.00 0.00 4.57
1730 2221 2.144482 ACAGTACCGTACACAAGCAC 57.856 50.000 11.26 0.00 0.00 4.40
1731 2222 4.319139 TTTACAGTACCGTACACAAGCA 57.681 40.909 11.26 0.00 0.00 3.91
1776 2280 1.202440 CGGACGGATCGGACCATAAAA 60.202 52.381 18.79 0.00 0.00 1.52
1777 2281 0.386476 CGGACGGATCGGACCATAAA 59.614 55.000 18.79 0.00 0.00 1.40
1943 2468 3.127548 CACTCATCATGCACAAGGTTACC 59.872 47.826 0.00 0.00 0.00 2.85
1944 2469 3.426695 GCACTCATCATGCACAAGGTTAC 60.427 47.826 0.00 0.00 42.88 2.50
2007 2532 6.183360 CCTCAAACAGCGCAGAAATATTTTTC 60.183 38.462 11.47 0.77 41.34 2.29
2011 2536 3.129287 CCCTCAAACAGCGCAGAAATATT 59.871 43.478 11.47 0.00 0.00 1.28
2013 2538 2.083774 CCCTCAAACAGCGCAGAAATA 58.916 47.619 11.47 0.00 0.00 1.40
2014 2539 0.883833 CCCTCAAACAGCGCAGAAAT 59.116 50.000 11.47 0.00 0.00 2.17
2015 2540 1.172180 CCCCTCAAACAGCGCAGAAA 61.172 55.000 11.47 0.00 0.00 2.52
2038 2564 4.157849 TGGGAATATTACCACGATTGCA 57.842 40.909 15.97 0.00 35.85 4.08
2109 2635 0.603172 AGATCCATCATGAGCTGCGC 60.603 55.000 0.00 0.00 27.97 6.09
2167 2694 1.089112 CATCGGCAGCAAGTTGATCA 58.911 50.000 7.16 0.00 0.00 2.92
2200 2729 0.249531 TAGTTTGCGCGAGGTTGTCA 60.250 50.000 12.10 0.00 0.00 3.58
2261 2790 0.394352 CTGCTAATGGGCCCTCGTTT 60.394 55.000 25.70 13.67 0.00 3.60
2262 2791 1.224592 CTGCTAATGGGCCCTCGTT 59.775 57.895 25.70 17.27 0.00 3.85
2272 2801 4.754372 TCAAACACTGAAGCTGCTAATG 57.246 40.909 0.90 1.67 0.00 1.90
2287 2816 7.505585 AGTCAAGACCTGGAAAATAATCAAACA 59.494 33.333 0.00 0.00 0.00 2.83
2292 2821 8.341892 AGAAAGTCAAGACCTGGAAAATAATC 57.658 34.615 0.00 0.00 0.00 1.75
2301 2830 2.810852 GAGCAAGAAAGTCAAGACCTGG 59.189 50.000 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.