Multiple sequence alignment - TraesCS1D01G287700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G287700 chr1D 100.000 9839 0 0 1 9839 386152964 386162802 0.000000e+00 18170
1 TraesCS1D01G287700 chr1D 79.478 268 50 5 61 326 141897718 141897982 1.690000e-42 185
2 TraesCS1D01G287700 chr1D 82.517 143 23 2 59 200 338746450 338746591 3.730000e-24 124
3 TraesCS1D01G287700 chr1B 97.408 3588 81 7 3863 7444 518532521 518536102 0.000000e+00 6100
4 TraesCS1D01G287700 chr1B 95.277 3049 92 10 734 3760 518529505 518532523 0.000000e+00 4785
5 TraesCS1D01G287700 chr1B 94.810 1657 56 10 7461 9092 518536477 518538128 0.000000e+00 2556
6 TraesCS1D01G287700 chr1B 75.651 538 96 25 59 565 196059680 196060213 1.650000e-57 235
7 TraesCS1D01G287700 chr1B 81.214 346 16 24 9108 9431 518538116 518538434 5.940000e-57 233
8 TraesCS1D01G287700 chr1B 94.444 126 6 1 3755 3879 687253940 687254065 1.010000e-44 193
9 TraesCS1D01G287700 chr1A 95.220 3473 102 29 6396 9839 486047691 486051128 0.000000e+00 5435
10 TraesCS1D01G287700 chr1A 95.979 2860 80 15 907 3760 486042159 486044989 0.000000e+00 4612
11 TraesCS1D01G287700 chr1A 97.733 1544 26 6 4827 6369 486046160 486047695 0.000000e+00 2649
12 TraesCS1D01G287700 chr1A 95.483 797 20 5 3863 4651 486044987 486045775 0.000000e+00 1258
13 TraesCS1D01G287700 chr1A 98.361 183 2 1 4647 4828 486045896 486046078 4.430000e-83 320
14 TraesCS1D01G287700 chr1A 95.902 122 5 0 3752 3873 309757286 309757165 2.170000e-46 198
15 TraesCS1D01G287700 chr5D 85.903 681 60 16 1714 2385 61701049 61700396 0.000000e+00 693
16 TraesCS1D01G287700 chr5B 85.384 691 67 15 1701 2382 542077889 542078554 0.000000e+00 686
17 TraesCS1D01G287700 chr5B 84.751 682 66 17 1714 2382 703729792 703730448 0.000000e+00 649
18 TraesCS1D01G287700 chr3B 84.978 679 67 15 1713 2382 720191700 720192352 0.000000e+00 656
19 TraesCS1D01G287700 chr3B 99.115 113 1 0 3755 3867 12156858 12156970 4.660000e-48 204
20 TraesCS1D01G287700 chr6A 84.728 681 70 14 1714 2385 504350045 504349390 0.000000e+00 651
21 TraesCS1D01G287700 chr6A 81.132 212 38 2 61 271 198910571 198910781 1.700000e-37 169
22 TraesCS1D01G287700 chr6D 84.402 686 71 16 1710 2385 4985109 4984450 8.330000e-180 641
23 TraesCS1D01G287700 chr7A 83.826 507 77 5 61 565 677687048 677687551 2.490000e-130 477
24 TraesCS1D01G287700 chr2A 79.958 479 86 10 61 534 513643367 513643840 2.630000e-90 344
25 TraesCS1D01G287700 chr2A 95.902 122 2 3 3753 3872 65514342 65514462 2.800000e-45 195
26 TraesCS1D01G287700 chr2A 95.122 123 4 2 3753 3873 507071157 507071279 1.010000e-44 193
27 TraesCS1D01G287700 chr2A 80.255 157 29 2 57 212 727198462 727198307 6.240000e-22 117
28 TraesCS1D01G287700 chr5A 78.516 512 88 15 61 565 283101894 283102390 5.740000e-82 316
29 TraesCS1D01G287700 chr5A 98.214 112 1 1 3758 3868 69844894 69844783 2.800000e-45 195
30 TraesCS1D01G287700 chr5A 95.868 121 3 2 3750 3868 455465765 455465645 2.800000e-45 195
31 TraesCS1D01G287700 chr3D 82.390 318 43 8 253 569 517800567 517800872 2.110000e-66 265
32 TraesCS1D01G287700 chrUn 95.200 125 4 2 3743 3866 30406077 30405954 7.800000e-46 196
33 TraesCS1D01G287700 chr2D 97.345 113 3 0 3759 3871 87035839 87035727 1.010000e-44 193
34 TraesCS1D01G287700 chr3A 83.929 168 21 1 381 548 653413990 653414151 1.320000e-33 156
35 TraesCS1D01G287700 chr7D 81.646 158 25 4 63 219 494988061 494987907 2.880000e-25 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G287700 chr1D 386152964 386162802 9838 False 18170.0 18170 100.00000 1 9839 1 chr1D.!!$F3 9838
1 TraesCS1D01G287700 chr1B 518529505 518538434 8929 False 3418.5 6100 92.17725 734 9431 4 chr1B.!!$F3 8697
2 TraesCS1D01G287700 chr1B 196059680 196060213 533 False 235.0 235 75.65100 59 565 1 chr1B.!!$F1 506
3 TraesCS1D01G287700 chr1A 486042159 486051128 8969 False 2854.8 5435 96.55520 907 9839 5 chr1A.!!$F1 8932
4 TraesCS1D01G287700 chr5D 61700396 61701049 653 True 693.0 693 85.90300 1714 2385 1 chr5D.!!$R1 671
5 TraesCS1D01G287700 chr5B 542077889 542078554 665 False 686.0 686 85.38400 1701 2382 1 chr5B.!!$F1 681
6 TraesCS1D01G287700 chr5B 703729792 703730448 656 False 649.0 649 84.75100 1714 2382 1 chr5B.!!$F2 668
7 TraesCS1D01G287700 chr3B 720191700 720192352 652 False 656.0 656 84.97800 1713 2382 1 chr3B.!!$F2 669
8 TraesCS1D01G287700 chr6A 504349390 504350045 655 True 651.0 651 84.72800 1714 2385 1 chr6A.!!$R1 671
9 TraesCS1D01G287700 chr6D 4984450 4985109 659 True 641.0 641 84.40200 1710 2385 1 chr6D.!!$R1 675
10 TraesCS1D01G287700 chr7A 677687048 677687551 503 False 477.0 477 83.82600 61 565 1 chr7A.!!$F1 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
851 870 0.031314 CATCGACTCACCCATCTCCG 59.969 60.000 0.00 0.00 0.00 4.63 F
852 871 0.106669 ATCGACTCACCCATCTCCGA 60.107 55.000 0.00 0.00 0.00 4.55 F
855 874 0.175989 GACTCACCCATCTCCGAACC 59.824 60.000 0.00 0.00 0.00 3.62 F
915 934 0.389296 GCGCAAAACCCCGCTAAATT 60.389 50.000 0.30 0.00 46.14 1.82 F
1306 1329 1.083657 CGGCCGCGACGAAATTATG 60.084 57.895 14.67 0.00 35.20 1.90 F
2520 2563 1.301716 GTTCTGGCGCTGGAGTTCA 60.302 57.895 7.64 0.00 0.00 3.18 F
3785 3831 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19 F
3797 3843 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06 F
5345 5615 1.514087 CATTTGCTTGGATGCCGCT 59.486 52.632 0.00 0.00 0.00 5.52 F
6521 6821 5.931294 TGTGTATTCTGGTGTTGTTCCTTA 58.069 37.500 0.00 0.00 0.00 2.69 F
7090 7394 1.203187 TCAAGGCTGAGACTACACCCT 60.203 52.381 0.00 0.00 0.00 4.34 F
8359 9026 0.883833 AAATCAGCTTGCAAGTCCCG 59.116 50.000 26.55 13.07 0.00 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2520 2563 3.822735 ACTGTAGCACACTTCATGCATTT 59.177 39.130 0.00 0.00 45.92 2.32 R
2628 2671 4.890158 TCAACTTGGCAGTAGATCTCAA 57.110 40.909 0.00 0.00 30.68 3.02 R
2815 2858 7.712639 GGATGCAACAATCTACAAGATCTTCTA 59.287 37.037 4.57 0.00 32.89 2.10 R
2889 2932 4.347876 TGTACCTCCTCCAACATCCATATG 59.652 45.833 0.00 0.00 39.17 1.78 R
3017 3062 6.071616 GGGACACCTGAACATTAGCATTTTTA 60.072 38.462 0.00 0.00 0.00 1.52 R
3847 3893 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55 R
4848 5113 0.030638 AAAACGCTGCACATGTCCAC 59.969 50.000 0.00 0.00 0.00 4.02 R
5601 5871 2.413437 CTAGTCCTGGATCGCCTGCG 62.413 65.000 4.92 4.92 41.35 5.18 R
6855 7159 2.076100 TGGAGCTGCGTGTAGAAAATG 58.924 47.619 0.00 0.00 0.00 2.32 R
7465 8127 1.466858 ACAAAATGGGGAGGAGGGAA 58.533 50.000 0.00 0.00 0.00 3.97 R
8799 9486 2.011947 TCATGAATCGGCAGCAAAGAG 58.988 47.619 0.00 0.00 0.00 2.85 R
9785 10512 0.254178 CCCCAGGTGAACCTCTCATG 59.746 60.000 0.00 0.00 46.65 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.029809 AAGGAAAGCGGGTCGGGG 62.030 66.667 0.00 0.00 0.00 5.73
19 20 4.340246 GGAAAGCGGGTCGGGGTT 62.340 66.667 0.00 0.00 0.00 4.11
20 21 3.053896 GAAAGCGGGTCGGGGTTG 61.054 66.667 0.00 0.00 0.00 3.77
21 22 3.837570 GAAAGCGGGTCGGGGTTGT 62.838 63.158 0.00 0.00 0.00 3.32
22 23 4.636435 AAGCGGGTCGGGGTTGTG 62.636 66.667 0.00 0.00 0.00 3.33
30 31 4.722700 CGGGGTTGTGGGCAGGAG 62.723 72.222 0.00 0.00 0.00 3.69
32 33 3.971702 GGGTTGTGGGCAGGAGCT 61.972 66.667 0.00 0.00 41.70 4.09
33 34 2.360475 GGTTGTGGGCAGGAGCTC 60.360 66.667 4.71 4.71 43.38 4.09
39 40 4.847444 GGGCAGGAGCTCGAAGGC 62.847 72.222 7.83 11.75 41.70 4.35
65 66 4.760047 GCGGTGCGGACATCCACT 62.760 66.667 9.96 0.00 35.14 4.00
101 102 2.586425 ACATGGTGACCTTCAAGTTGG 58.414 47.619 2.11 0.00 0.00 3.77
111 112 2.222027 CTTCAAGTTGGTGACTCCCAC 58.778 52.381 2.34 0.00 44.95 4.61
112 113 0.105964 TCAAGTTGGTGACTCCCACG 59.894 55.000 2.34 0.00 46.62 4.94
113 114 1.227853 AAGTTGGTGACTCCCACGC 60.228 57.895 0.00 0.00 46.62 5.34
136 138 3.744238 TGAAGGTGATCGTCTTCAACA 57.256 42.857 20.97 6.08 44.14 3.33
148 150 2.477375 GTCTTCAACAACGACGGCATTA 59.523 45.455 0.00 0.00 0.00 1.90
154 156 2.485903 ACAACGACGGCATTAAAGTGA 58.514 42.857 0.00 0.00 0.00 3.41
164 166 4.082787 CGGCATTAAAGTGATGACCAAGTT 60.083 41.667 0.00 0.00 0.00 2.66
188 190 3.109547 GGCACGACGACGCATTCA 61.110 61.111 7.30 0.00 43.96 2.57
189 191 2.452813 GGCACGACGACGCATTCAT 61.453 57.895 7.30 0.00 43.96 2.57
199 201 1.126113 GACGCATTCATCGTGAACGTT 59.874 47.619 0.00 0.00 38.57 3.99
202 204 3.369756 ACGCATTCATCGTGAACGTTTAT 59.630 39.130 0.46 0.00 39.45 1.40
212 214 4.393990 TCGTGAACGTTTATGAGAGCTCTA 59.606 41.667 18.25 5.78 40.80 2.43
219 221 5.859114 ACGTTTATGAGAGCTCTATATTGCG 59.141 40.000 18.25 18.67 0.00 4.85
221 223 3.949842 ATGAGAGCTCTATATTGCGCA 57.050 42.857 18.25 5.66 0.00 6.09
235 237 1.175347 TGCGCATGCTGGTTTGGTTA 61.175 50.000 17.13 0.00 43.34 2.85
241 243 1.588674 TGCTGGTTTGGTTACGACTG 58.411 50.000 0.00 0.00 0.00 3.51
246 248 2.093606 TGGTTTGGTTACGACTGTGTCA 60.094 45.455 0.00 0.00 32.09 3.58
249 251 4.751098 GGTTTGGTTACGACTGTGTCATAA 59.249 41.667 0.00 0.00 32.09 1.90
255 257 5.063060 GGTTACGACTGTGTCATAATGGTTC 59.937 44.000 0.00 0.00 32.09 3.62
299 301 9.919348 TTTAAGTGTCGTACTATGTTTGAAAAC 57.081 29.630 0.00 0.00 39.18 2.43
300 302 7.781548 AAGTGTCGTACTATGTTTGAAAACT 57.218 32.000 7.39 0.00 39.18 2.66
301 303 7.173863 AGTGTCGTACTATGTTTGAAAACTG 57.826 36.000 7.39 1.39 38.04 3.16
302 304 6.759827 AGTGTCGTACTATGTTTGAAAACTGT 59.240 34.615 7.39 6.34 38.04 3.55
303 305 7.279313 AGTGTCGTACTATGTTTGAAAACTGTT 59.721 33.333 7.39 0.00 38.04 3.16
304 306 7.906527 GTGTCGTACTATGTTTGAAAACTGTTT 59.093 33.333 0.00 0.00 39.59 2.83
305 307 7.906010 TGTCGTACTATGTTTGAAAACTGTTTG 59.094 33.333 6.53 0.00 39.59 2.93
306 308 8.117988 GTCGTACTATGTTTGAAAACTGTTTGA 58.882 33.333 6.53 0.00 39.59 2.69
307 309 8.666573 TCGTACTATGTTTGAAAACTGTTTGAA 58.333 29.630 6.53 0.50 39.59 2.69
308 310 9.445786 CGTACTATGTTTGAAAACTGTTTGAAT 57.554 29.630 6.53 0.00 39.59 2.57
311 313 9.868277 ACTATGTTTGAAAACTGTTTGAATTGA 57.132 25.926 6.53 0.00 39.59 2.57
353 355 9.806203 ATATGATATTTGTTTGTGTGTCATTGG 57.194 29.630 0.00 0.00 0.00 3.16
354 356 7.048629 TGATATTTGTTTGTGTGTCATTGGT 57.951 32.000 0.00 0.00 0.00 3.67
355 357 7.495901 TGATATTTGTTTGTGTGTCATTGGTT 58.504 30.769 0.00 0.00 0.00 3.67
356 358 7.984050 TGATATTTGTTTGTGTGTCATTGGTTT 59.016 29.630 0.00 0.00 0.00 3.27
357 359 5.852738 TTTGTTTGTGTGTCATTGGTTTG 57.147 34.783 0.00 0.00 0.00 2.93
358 360 4.527509 TGTTTGTGTGTCATTGGTTTGT 57.472 36.364 0.00 0.00 0.00 2.83
359 361 4.887748 TGTTTGTGTGTCATTGGTTTGTT 58.112 34.783 0.00 0.00 0.00 2.83
360 362 4.926238 TGTTTGTGTGTCATTGGTTTGTTC 59.074 37.500 0.00 0.00 0.00 3.18
361 363 3.791973 TGTGTGTCATTGGTTTGTTCC 57.208 42.857 0.00 0.00 0.00 3.62
362 364 2.098280 TGTGTGTCATTGGTTTGTTCCG 59.902 45.455 0.00 0.00 0.00 4.30
363 365 1.066303 TGTGTCATTGGTTTGTTCCGC 59.934 47.619 0.00 0.00 0.00 5.54
364 366 1.066303 GTGTCATTGGTTTGTTCCGCA 59.934 47.619 0.00 0.00 0.00 5.69
365 367 1.959985 TGTCATTGGTTTGTTCCGCAT 59.040 42.857 0.00 0.00 0.00 4.73
366 368 2.288091 TGTCATTGGTTTGTTCCGCATG 60.288 45.455 0.00 0.00 0.00 4.06
367 369 1.070038 CATTGGTTTGTTCCGCATGC 58.930 50.000 7.91 7.91 0.00 4.06
368 370 0.037419 ATTGGTTTGTTCCGCATGCC 60.037 50.000 13.15 0.00 0.00 4.40
369 371 1.112315 TTGGTTTGTTCCGCATGCCT 61.112 50.000 13.15 0.00 0.00 4.75
370 372 0.250945 TGGTTTGTTCCGCATGCCTA 60.251 50.000 13.15 0.00 0.00 3.93
371 373 0.451783 GGTTTGTTCCGCATGCCTAG 59.548 55.000 13.15 0.90 0.00 3.02
372 374 1.165270 GTTTGTTCCGCATGCCTAGT 58.835 50.000 13.15 0.00 0.00 2.57
373 375 1.135689 GTTTGTTCCGCATGCCTAGTG 60.136 52.381 13.15 0.00 0.00 2.74
374 376 0.036164 TTGTTCCGCATGCCTAGTGT 59.964 50.000 13.15 0.00 0.00 3.55
375 377 0.899019 TGTTCCGCATGCCTAGTGTA 59.101 50.000 13.15 0.00 0.00 2.90
376 378 1.484653 TGTTCCGCATGCCTAGTGTAT 59.515 47.619 13.15 0.00 0.00 2.29
377 379 2.093181 TGTTCCGCATGCCTAGTGTATT 60.093 45.455 13.15 0.00 0.00 1.89
378 380 2.238942 TCCGCATGCCTAGTGTATTG 57.761 50.000 13.15 0.00 0.00 1.90
379 381 1.760029 TCCGCATGCCTAGTGTATTGA 59.240 47.619 13.15 0.00 0.00 2.57
380 382 2.368548 TCCGCATGCCTAGTGTATTGAT 59.631 45.455 13.15 0.00 0.00 2.57
381 383 3.576550 TCCGCATGCCTAGTGTATTGATA 59.423 43.478 13.15 0.00 0.00 2.15
382 384 4.039852 TCCGCATGCCTAGTGTATTGATAA 59.960 41.667 13.15 0.00 0.00 1.75
383 385 4.152402 CCGCATGCCTAGTGTATTGATAAC 59.848 45.833 13.15 0.00 0.00 1.89
384 386 4.152402 CGCATGCCTAGTGTATTGATAACC 59.848 45.833 13.15 0.00 0.00 2.85
385 387 5.308825 GCATGCCTAGTGTATTGATAACCT 58.691 41.667 6.36 0.00 0.00 3.50
386 388 5.409826 GCATGCCTAGTGTATTGATAACCTC 59.590 44.000 6.36 0.00 0.00 3.85
387 389 6.524734 CATGCCTAGTGTATTGATAACCTCA 58.475 40.000 0.00 0.00 0.00 3.86
388 390 5.914033 TGCCTAGTGTATTGATAACCTCAC 58.086 41.667 0.00 0.00 32.17 3.51
389 391 5.163343 TGCCTAGTGTATTGATAACCTCACC 60.163 44.000 0.00 0.00 32.17 4.02
390 392 5.163343 GCCTAGTGTATTGATAACCTCACCA 60.163 44.000 0.00 0.00 32.17 4.17
391 393 6.281405 CCTAGTGTATTGATAACCTCACCAC 58.719 44.000 0.00 0.00 32.17 4.16
392 394 5.099042 AGTGTATTGATAACCTCACCACC 57.901 43.478 0.00 0.00 31.94 4.61
393 395 4.783227 AGTGTATTGATAACCTCACCACCT 59.217 41.667 0.00 0.00 31.94 4.00
394 396 5.250774 AGTGTATTGATAACCTCACCACCTT 59.749 40.000 0.00 0.00 31.94 3.50
395 397 5.585047 GTGTATTGATAACCTCACCACCTTC 59.415 44.000 0.00 0.00 32.17 3.46
396 398 4.927267 ATTGATAACCTCACCACCTTCA 57.073 40.909 0.00 0.00 32.17 3.02
397 399 3.695830 TGATAACCTCACCACCTTCAC 57.304 47.619 0.00 0.00 0.00 3.18
398 400 2.028476 TGATAACCTCACCACCTTCACG 60.028 50.000 0.00 0.00 0.00 4.35
399 401 1.707106 TAACCTCACCACCTTCACGA 58.293 50.000 0.00 0.00 0.00 4.35
400 402 0.393077 AACCTCACCACCTTCACGAG 59.607 55.000 0.00 0.00 0.00 4.18
413 415 4.727235 CTTCACGAGGAAGTTACCAAAC 57.273 45.455 11.66 0.00 46.49 2.93
414 416 3.823281 TCACGAGGAAGTTACCAAACA 57.177 42.857 0.00 0.00 38.12 2.83
415 417 4.139859 TCACGAGGAAGTTACCAAACAA 57.860 40.909 0.00 0.00 38.12 2.83
416 418 3.872771 TCACGAGGAAGTTACCAAACAAC 59.127 43.478 0.00 0.00 38.12 3.32
417 419 3.623960 CACGAGGAAGTTACCAAACAACA 59.376 43.478 0.00 0.00 38.12 3.33
418 420 4.274950 CACGAGGAAGTTACCAAACAACAT 59.725 41.667 0.00 0.00 38.12 2.71
419 421 4.274950 ACGAGGAAGTTACCAAACAACATG 59.725 41.667 0.00 0.00 38.12 3.21
420 422 4.546570 GAGGAAGTTACCAAACAACATGC 58.453 43.478 0.00 0.00 38.12 4.06
421 423 3.320826 AGGAAGTTACCAAACAACATGCC 59.679 43.478 0.00 0.00 38.12 4.40
422 424 3.554129 GGAAGTTACCAAACAACATGCCC 60.554 47.826 0.00 0.00 38.12 5.36
423 425 2.957474 AGTTACCAAACAACATGCCCT 58.043 42.857 0.00 0.00 38.12 5.19
424 426 2.627699 AGTTACCAAACAACATGCCCTG 59.372 45.455 0.00 0.00 38.12 4.45
425 427 0.965439 TACCAAACAACATGCCCTGC 59.035 50.000 0.00 0.00 0.00 4.85
426 428 1.047596 ACCAAACAACATGCCCTGCA 61.048 50.000 0.00 0.00 44.86 4.41
427 429 6.598617 GTTACCAAACAACATGCCCTGCAT 62.599 45.833 0.00 0.00 41.62 3.96
438 440 2.523245 TGCCCTGCATGTAATCAAACA 58.477 42.857 0.00 0.00 31.71 2.83
439 441 2.230992 TGCCCTGCATGTAATCAAACAC 59.769 45.455 0.00 0.00 31.71 3.32
440 442 2.417243 GCCCTGCATGTAATCAAACACC 60.417 50.000 0.00 0.00 30.75 4.16
441 443 2.824936 CCCTGCATGTAATCAAACACCA 59.175 45.455 0.00 0.00 30.75 4.17
442 444 3.448301 CCCTGCATGTAATCAAACACCAT 59.552 43.478 0.00 0.00 30.75 3.55
443 445 4.426416 CCTGCATGTAATCAAACACCATG 58.574 43.478 0.00 0.00 36.77 3.66
444 446 4.158209 CCTGCATGTAATCAAACACCATGA 59.842 41.667 0.00 0.00 35.96 3.07
445 447 5.058149 TGCATGTAATCAAACACCATGAC 57.942 39.130 0.00 0.00 35.96 3.06
446 448 4.766373 TGCATGTAATCAAACACCATGACT 59.234 37.500 0.00 0.00 35.96 3.41
447 449 5.243507 TGCATGTAATCAAACACCATGACTT 59.756 36.000 0.00 0.00 35.96 3.01
448 450 5.574055 GCATGTAATCAAACACCATGACTTG 59.426 40.000 0.00 0.00 35.96 3.16
449 451 6.680810 CATGTAATCAAACACCATGACTTGT 58.319 36.000 0.00 0.00 35.96 3.16
450 452 6.070897 TGTAATCAAACACCATGACTTGTG 57.929 37.500 0.00 0.00 38.44 3.33
456 458 3.691049 ACACCATGACTTGTGTTTTCG 57.309 42.857 0.00 0.00 42.82 3.46
457 459 2.223479 ACACCATGACTTGTGTTTTCGC 60.223 45.455 0.00 0.00 42.82 4.70
458 460 1.336755 ACCATGACTTGTGTTTTCGCC 59.663 47.619 0.00 0.00 0.00 5.54
459 461 1.608590 CCATGACTTGTGTTTTCGCCT 59.391 47.619 0.00 0.00 0.00 5.52
460 462 2.811431 CCATGACTTGTGTTTTCGCCTA 59.189 45.455 0.00 0.00 0.00 3.93
461 463 3.252215 CCATGACTTGTGTTTTCGCCTAA 59.748 43.478 0.00 0.00 0.00 2.69
462 464 4.261405 CCATGACTTGTGTTTTCGCCTAAA 60.261 41.667 0.00 0.00 0.00 1.85
463 465 4.281525 TGACTTGTGTTTTCGCCTAAAC 57.718 40.909 2.27 2.27 38.26 2.01
464 466 3.690139 TGACTTGTGTTTTCGCCTAAACA 59.310 39.130 6.87 6.87 43.62 2.83
465 467 4.156190 TGACTTGTGTTTTCGCCTAAACAA 59.844 37.500 11.34 3.27 46.27 2.83
466 468 4.668289 ACTTGTGTTTTCGCCTAAACAAG 58.332 39.130 11.34 10.84 46.27 3.16
467 469 4.157105 ACTTGTGTTTTCGCCTAAACAAGT 59.843 37.500 11.99 11.99 46.27 3.16
468 470 4.022464 TGTGTTTTCGCCTAAACAAGTG 57.978 40.909 11.34 0.00 46.27 3.16
469 471 3.181495 TGTGTTTTCGCCTAAACAAGTGG 60.181 43.478 11.34 0.00 46.27 4.00
470 472 2.359531 TGTTTTCGCCTAAACAAGTGGG 59.640 45.455 8.18 0.00 43.07 4.61
471 473 0.955905 TTTCGCCTAAACAAGTGGGC 59.044 50.000 0.00 0.00 41.02 5.36
472 474 0.179015 TTCGCCTAAACAAGTGGGCA 60.179 50.000 0.00 0.00 44.27 5.36
473 475 0.179015 TCGCCTAAACAAGTGGGCAA 60.179 50.000 0.00 0.00 44.27 4.52
474 476 0.039527 CGCCTAAACAAGTGGGCAAC 60.040 55.000 0.00 0.00 44.27 4.17
488 490 1.699730 GGCAACCAAACAACCTACCT 58.300 50.000 0.00 0.00 0.00 3.08
489 491 2.036387 GGCAACCAAACAACCTACCTT 58.964 47.619 0.00 0.00 0.00 3.50
490 492 2.432874 GGCAACCAAACAACCTACCTTT 59.567 45.455 0.00 0.00 0.00 3.11
491 493 3.491964 GGCAACCAAACAACCTACCTTTC 60.492 47.826 0.00 0.00 0.00 2.62
492 494 3.794138 GCAACCAAACAACCTACCTTTCG 60.794 47.826 0.00 0.00 0.00 3.46
493 495 3.286329 ACCAAACAACCTACCTTTCGT 57.714 42.857 0.00 0.00 0.00 3.85
494 496 3.623703 ACCAAACAACCTACCTTTCGTT 58.376 40.909 0.00 0.00 0.00 3.85
495 497 4.018490 ACCAAACAACCTACCTTTCGTTT 58.982 39.130 0.00 0.00 0.00 3.60
496 498 4.096833 ACCAAACAACCTACCTTTCGTTTC 59.903 41.667 0.00 0.00 0.00 2.78
497 499 4.276460 CAAACAACCTACCTTTCGTTTCG 58.724 43.478 0.00 0.00 0.00 3.46
498 500 3.183793 ACAACCTACCTTTCGTTTCGT 57.816 42.857 0.00 0.00 0.00 3.85
499 501 3.126073 ACAACCTACCTTTCGTTTCGTC 58.874 45.455 0.00 0.00 0.00 4.20
500 502 2.445565 ACCTACCTTTCGTTTCGTCC 57.554 50.000 0.00 0.00 0.00 4.79
501 503 1.001293 ACCTACCTTTCGTTTCGTCCC 59.999 52.381 0.00 0.00 0.00 4.46
502 504 1.001181 CCTACCTTTCGTTTCGTCCCA 59.999 52.381 0.00 0.00 0.00 4.37
503 505 2.064014 CTACCTTTCGTTTCGTCCCAC 58.936 52.381 0.00 0.00 0.00 4.61
504 506 0.877213 ACCTTTCGTTTCGTCCCACG 60.877 55.000 0.00 0.00 44.19 4.94
505 507 1.203313 CTTTCGTTTCGTCCCACGC 59.797 57.895 0.00 0.00 42.21 5.34
506 508 1.492319 CTTTCGTTTCGTCCCACGCA 61.492 55.000 0.00 0.00 42.21 5.24
507 509 1.492319 TTTCGTTTCGTCCCACGCAG 61.492 55.000 0.00 0.00 42.21 5.18
508 510 3.411351 CGTTTCGTCCCACGCAGG 61.411 66.667 0.00 0.00 42.21 4.85
509 511 3.723348 GTTTCGTCCCACGCAGGC 61.723 66.667 0.00 0.00 42.21 4.85
510 512 3.936203 TTTCGTCCCACGCAGGCT 61.936 61.111 0.00 0.00 42.21 4.58
511 513 2.575893 TTTCGTCCCACGCAGGCTA 61.576 57.895 0.00 0.00 42.21 3.93
512 514 2.501223 TTTCGTCCCACGCAGGCTAG 62.501 60.000 0.00 0.00 42.21 3.42
513 515 3.449227 CGTCCCACGCAGGCTAGA 61.449 66.667 0.00 0.00 33.65 2.43
514 516 2.978824 GTCCCACGCAGGCTAGAA 59.021 61.111 0.00 0.00 35.39 2.10
515 517 1.153549 GTCCCACGCAGGCTAGAAG 60.154 63.158 0.00 0.00 35.39 2.85
516 518 2.187946 CCCACGCAGGCTAGAAGG 59.812 66.667 0.00 0.00 35.39 3.46
517 519 2.660064 CCCACGCAGGCTAGAAGGT 61.660 63.158 0.00 0.00 35.39 3.50
518 520 1.327690 CCCACGCAGGCTAGAAGGTA 61.328 60.000 0.00 0.00 35.39 3.08
519 521 0.753262 CCACGCAGGCTAGAAGGTAT 59.247 55.000 0.00 0.00 0.00 2.73
520 522 1.539065 CCACGCAGGCTAGAAGGTATG 60.539 57.143 0.00 0.00 0.00 2.39
521 523 0.105039 ACGCAGGCTAGAAGGTATGC 59.895 55.000 0.00 0.00 0.00 3.14
522 524 0.104855 CGCAGGCTAGAAGGTATGCA 59.895 55.000 0.00 0.00 33.33 3.96
523 525 1.871408 CGCAGGCTAGAAGGTATGCAG 60.871 57.143 0.00 0.00 33.33 4.41
524 526 1.139853 GCAGGCTAGAAGGTATGCAGT 59.860 52.381 0.00 0.00 33.92 4.40
525 527 2.804933 GCAGGCTAGAAGGTATGCAGTC 60.805 54.545 0.00 0.00 33.92 3.51
526 528 2.432146 CAGGCTAGAAGGTATGCAGTCA 59.568 50.000 0.00 0.00 0.00 3.41
527 529 3.107601 AGGCTAGAAGGTATGCAGTCAA 58.892 45.455 0.00 0.00 0.00 3.18
528 530 3.118592 AGGCTAGAAGGTATGCAGTCAAC 60.119 47.826 0.00 0.00 0.00 3.18
529 531 3.198872 GCTAGAAGGTATGCAGTCAACC 58.801 50.000 0.00 0.00 0.00 3.77
530 532 3.369471 GCTAGAAGGTATGCAGTCAACCA 60.369 47.826 11.52 0.00 35.64 3.67
531 533 3.788227 AGAAGGTATGCAGTCAACCAA 57.212 42.857 11.52 0.00 35.64 3.67
532 534 4.098914 AGAAGGTATGCAGTCAACCAAA 57.901 40.909 11.52 0.00 35.64 3.28
533 535 3.821033 AGAAGGTATGCAGTCAACCAAAC 59.179 43.478 11.52 4.25 35.64 2.93
534 536 3.222173 AGGTATGCAGTCAACCAAACA 57.778 42.857 11.52 0.00 35.64 2.83
535 537 3.561143 AGGTATGCAGTCAACCAAACAA 58.439 40.909 11.52 0.00 35.64 2.83
536 538 4.151883 AGGTATGCAGTCAACCAAACAAT 58.848 39.130 11.52 0.00 35.64 2.71
537 539 5.321102 AGGTATGCAGTCAACCAAACAATA 58.679 37.500 11.52 0.00 35.64 1.90
538 540 5.951747 AGGTATGCAGTCAACCAAACAATAT 59.048 36.000 11.52 0.00 35.64 1.28
539 541 7.116075 AGGTATGCAGTCAACCAAACAATATA 58.884 34.615 11.52 0.00 35.64 0.86
540 542 7.067008 AGGTATGCAGTCAACCAAACAATATAC 59.933 37.037 11.52 0.00 35.64 1.47
541 543 6.832520 ATGCAGTCAACCAAACAATATACA 57.167 33.333 0.00 0.00 0.00 2.29
542 544 6.252967 TGCAGTCAACCAAACAATATACAG 57.747 37.500 0.00 0.00 0.00 2.74
543 545 6.000840 TGCAGTCAACCAAACAATATACAGA 58.999 36.000 0.00 0.00 0.00 3.41
544 546 6.658816 TGCAGTCAACCAAACAATATACAGAT 59.341 34.615 0.00 0.00 0.00 2.90
545 547 6.968904 GCAGTCAACCAAACAATATACAGATG 59.031 38.462 0.00 0.00 0.00 2.90
546 548 7.362056 GCAGTCAACCAAACAATATACAGATGT 60.362 37.037 0.00 0.00 0.00 3.06
547 549 8.514594 CAGTCAACCAAACAATATACAGATGTT 58.485 33.333 0.00 0.00 38.85 2.71
548 550 9.733556 AGTCAACCAAACAATATACAGATGTTA 57.266 29.630 0.00 0.00 36.33 2.41
578 580 8.939201 TTTTGCATGTTTACTTTCAATTGAGA 57.061 26.923 8.41 3.12 0.00 3.27
579 581 7.928908 TTGCATGTTTACTTTCAATTGAGAC 57.071 32.000 8.41 3.37 0.00 3.36
580 582 7.036996 TGCATGTTTACTTTCAATTGAGACA 57.963 32.000 8.41 8.35 0.00 3.41
581 583 7.660112 TGCATGTTTACTTTCAATTGAGACAT 58.340 30.769 8.41 10.01 0.00 3.06
582 584 8.791675 TGCATGTTTACTTTCAATTGAGACATA 58.208 29.630 8.41 0.00 0.00 2.29
583 585 9.282247 GCATGTTTACTTTCAATTGAGACATAG 57.718 33.333 8.41 5.39 0.00 2.23
587 589 9.495754 GTTTACTTTCAATTGAGACATAGATGC 57.504 33.333 8.41 0.00 0.00 3.91
588 590 8.791327 TTACTTTCAATTGAGACATAGATGCA 57.209 30.769 8.41 0.00 0.00 3.96
589 591 7.692460 ACTTTCAATTGAGACATAGATGCAA 57.308 32.000 8.41 0.00 0.00 4.08
590 592 8.289939 ACTTTCAATTGAGACATAGATGCAAT 57.710 30.769 8.41 0.00 0.00 3.56
591 593 8.188799 ACTTTCAATTGAGACATAGATGCAATG 58.811 33.333 8.41 0.00 30.35 2.82
592 594 6.068473 TCAATTGAGACATAGATGCAATGC 57.932 37.500 3.38 0.00 30.35 3.56
593 595 5.591067 TCAATTGAGACATAGATGCAATGCA 59.409 36.000 11.44 11.44 44.86 3.96
594 596 6.095720 TCAATTGAGACATAGATGCAATGCAA 59.904 34.615 13.45 0.00 43.62 4.08
595 597 5.494632 TTGAGACATAGATGCAATGCAAG 57.505 39.130 13.45 2.77 43.62 4.01
596 598 3.314357 TGAGACATAGATGCAATGCAAGC 59.686 43.478 13.45 7.73 43.62 4.01
597 599 3.284617 AGACATAGATGCAATGCAAGCA 58.715 40.909 13.45 17.90 43.62 3.91
598 600 3.697542 AGACATAGATGCAATGCAAGCAA 59.302 39.130 13.45 5.69 46.27 3.91
599 601 4.158949 AGACATAGATGCAATGCAAGCAAA 59.841 37.500 13.45 9.77 46.27 3.68
600 602 4.823157 ACATAGATGCAATGCAAGCAAAA 58.177 34.783 13.45 9.47 46.27 2.44
601 603 4.868171 ACATAGATGCAATGCAAGCAAAAG 59.132 37.500 13.45 11.05 46.27 2.27
602 604 3.396260 AGATGCAATGCAAGCAAAAGT 57.604 38.095 13.45 4.88 46.27 2.66
603 605 4.524316 AGATGCAATGCAAGCAAAAGTA 57.476 36.364 13.45 0.00 46.27 2.24
604 606 4.491676 AGATGCAATGCAAGCAAAAGTAG 58.508 39.130 13.45 0.00 46.27 2.57
605 607 4.219070 AGATGCAATGCAAGCAAAAGTAGA 59.781 37.500 13.45 0.00 46.27 2.59
606 608 4.524316 TGCAATGCAAGCAAAAGTAGAT 57.476 36.364 5.01 0.00 39.39 1.98
607 609 5.641783 TGCAATGCAAGCAAAAGTAGATA 57.358 34.783 5.01 0.00 39.39 1.98
608 610 5.401550 TGCAATGCAAGCAAAAGTAGATAC 58.598 37.500 5.01 0.00 39.39 2.24
609 611 4.496895 GCAATGCAAGCAAAAGTAGATACG 59.503 41.667 0.00 0.00 0.00 3.06
610 612 4.882671 ATGCAAGCAAAAGTAGATACGG 57.117 40.909 0.00 0.00 0.00 4.02
611 613 2.418628 TGCAAGCAAAAGTAGATACGGC 59.581 45.455 0.00 0.00 0.00 5.68
612 614 2.418628 GCAAGCAAAAGTAGATACGGCA 59.581 45.455 0.00 0.00 0.00 5.69
613 615 3.119990 GCAAGCAAAAGTAGATACGGCAA 60.120 43.478 0.00 0.00 0.00 4.52
614 616 4.614993 GCAAGCAAAAGTAGATACGGCAAA 60.615 41.667 0.00 0.00 0.00 3.68
615 617 4.680171 AGCAAAAGTAGATACGGCAAAC 57.320 40.909 0.00 0.00 0.00 2.93
616 618 4.069304 AGCAAAAGTAGATACGGCAAACA 58.931 39.130 0.00 0.00 0.00 2.83
617 619 4.517453 AGCAAAAGTAGATACGGCAAACAA 59.483 37.500 0.00 0.00 0.00 2.83
618 620 5.009210 AGCAAAAGTAGATACGGCAAACAAA 59.991 36.000 0.00 0.00 0.00 2.83
619 621 5.116528 GCAAAAGTAGATACGGCAAACAAAC 59.883 40.000 0.00 0.00 0.00 2.93
620 622 6.202937 CAAAAGTAGATACGGCAAACAAACA 58.797 36.000 0.00 0.00 0.00 2.83
621 623 5.352643 AAGTAGATACGGCAAACAAACAC 57.647 39.130 0.00 0.00 0.00 3.32
622 624 4.382291 AGTAGATACGGCAAACAAACACA 58.618 39.130 0.00 0.00 0.00 3.72
623 625 3.619233 AGATACGGCAAACAAACACAC 57.381 42.857 0.00 0.00 0.00 3.82
624 626 2.292292 AGATACGGCAAACAAACACACC 59.708 45.455 0.00 0.00 0.00 4.16
625 627 0.739561 TACGGCAAACAAACACACCC 59.260 50.000 0.00 0.00 0.00 4.61
626 628 1.251527 ACGGCAAACAAACACACCCA 61.252 50.000 0.00 0.00 0.00 4.51
627 629 0.103937 CGGCAAACAAACACACCCAT 59.896 50.000 0.00 0.00 0.00 4.00
628 630 1.580815 GGCAAACAAACACACCCATG 58.419 50.000 0.00 0.00 0.00 3.66
629 631 1.580815 GCAAACAAACACACCCATGG 58.419 50.000 4.14 4.14 0.00 3.66
630 632 1.134551 GCAAACAAACACACCCATGGT 60.135 47.619 11.73 0.00 35.62 3.55
641 643 1.225373 ACCCATGGTGCCTATCATGT 58.775 50.000 11.73 0.00 42.66 3.21
642 644 1.570501 ACCCATGGTGCCTATCATGTT 59.429 47.619 11.73 0.00 42.66 2.71
643 645 2.024080 ACCCATGGTGCCTATCATGTTT 60.024 45.455 11.73 0.00 42.66 2.83
644 646 3.033184 CCCATGGTGCCTATCATGTTTT 58.967 45.455 11.73 0.00 42.66 2.43
645 647 3.068590 CCCATGGTGCCTATCATGTTTTC 59.931 47.826 11.73 0.00 42.66 2.29
646 648 3.068590 CCATGGTGCCTATCATGTTTTCC 59.931 47.826 2.57 0.00 42.66 3.13
647 649 3.448093 TGGTGCCTATCATGTTTTCCA 57.552 42.857 0.00 0.00 0.00 3.53
648 650 3.772387 TGGTGCCTATCATGTTTTCCAA 58.228 40.909 0.00 0.00 0.00 3.53
649 651 4.155709 TGGTGCCTATCATGTTTTCCAAA 58.844 39.130 0.00 0.00 0.00 3.28
650 652 4.590647 TGGTGCCTATCATGTTTTCCAAAA 59.409 37.500 0.00 0.00 0.00 2.44
651 653 5.070981 TGGTGCCTATCATGTTTTCCAAAAA 59.929 36.000 0.00 0.00 0.00 1.94
698 700 6.490566 TTTTTAACAGAAATCCTCCGCTAC 57.509 37.500 0.00 0.00 0.00 3.58
699 701 4.811969 TTAACAGAAATCCTCCGCTACA 57.188 40.909 0.00 0.00 0.00 2.74
700 702 3.914426 AACAGAAATCCTCCGCTACAT 57.086 42.857 0.00 0.00 0.00 2.29
701 703 3.914426 ACAGAAATCCTCCGCTACATT 57.086 42.857 0.00 0.00 0.00 2.71
702 704 4.222124 ACAGAAATCCTCCGCTACATTT 57.778 40.909 0.00 0.00 0.00 2.32
703 705 4.589908 ACAGAAATCCTCCGCTACATTTT 58.410 39.130 0.00 0.00 0.00 1.82
704 706 5.741011 ACAGAAATCCTCCGCTACATTTTA 58.259 37.500 0.00 0.00 0.00 1.52
705 707 6.357367 ACAGAAATCCTCCGCTACATTTTAT 58.643 36.000 0.00 0.00 0.00 1.40
706 708 6.828785 ACAGAAATCCTCCGCTACATTTTATT 59.171 34.615 0.00 0.00 0.00 1.40
707 709 7.339466 ACAGAAATCCTCCGCTACATTTTATTT 59.661 33.333 0.00 0.00 0.00 1.40
708 710 8.190784 CAGAAATCCTCCGCTACATTTTATTTT 58.809 33.333 0.00 0.00 0.00 1.82
709 711 9.403583 AGAAATCCTCCGCTACATTTTATTTTA 57.596 29.630 0.00 0.00 0.00 1.52
717 719 9.589111 TCCGCTACATTTTATTTTATTTTTCCC 57.411 29.630 0.00 0.00 0.00 3.97
718 720 9.594478 CCGCTACATTTTATTTTATTTTTCCCT 57.406 29.630 0.00 0.00 0.00 4.20
756 758 4.021016 GGAGGATTTCTGCCACGATACTAT 60.021 45.833 0.00 0.00 0.00 2.12
757 759 5.140747 AGGATTTCTGCCACGATACTATC 57.859 43.478 0.00 0.00 0.00 2.08
763 765 0.314302 GCCACGATACTATCCGCACT 59.686 55.000 0.00 0.00 0.00 4.40
764 766 1.930817 GCCACGATACTATCCGCACTG 60.931 57.143 0.00 0.00 0.00 3.66
824 843 1.847968 CCCTGGACCCACCTGTCTT 60.848 63.158 0.00 0.00 39.86 3.01
848 867 1.115467 GGACATCGACTCACCCATCT 58.885 55.000 0.00 0.00 0.00 2.90
849 868 1.067821 GGACATCGACTCACCCATCTC 59.932 57.143 0.00 0.00 0.00 2.75
850 869 1.067821 GACATCGACTCACCCATCTCC 59.932 57.143 0.00 0.00 0.00 3.71
851 870 0.031314 CATCGACTCACCCATCTCCG 59.969 60.000 0.00 0.00 0.00 4.63
852 871 0.106669 ATCGACTCACCCATCTCCGA 60.107 55.000 0.00 0.00 0.00 4.55
853 872 0.323087 TCGACTCACCCATCTCCGAA 60.323 55.000 0.00 0.00 0.00 4.30
854 873 0.179134 CGACTCACCCATCTCCGAAC 60.179 60.000 0.00 0.00 0.00 3.95
855 874 0.175989 GACTCACCCATCTCCGAACC 59.824 60.000 0.00 0.00 0.00 3.62
856 875 1.141881 CTCACCCATCTCCGAACCG 59.858 63.158 0.00 0.00 0.00 4.44
857 876 2.511600 CACCCATCTCCGAACCGC 60.512 66.667 0.00 0.00 0.00 5.68
858 877 3.782443 ACCCATCTCCGAACCGCC 61.782 66.667 0.00 0.00 0.00 6.13
859 878 4.547367 CCCATCTCCGAACCGCCC 62.547 72.222 0.00 0.00 0.00 6.13
860 879 4.547367 CCATCTCCGAACCGCCCC 62.547 72.222 0.00 0.00 0.00 5.80
861 880 4.547367 CATCTCCGAACCGCCCCC 62.547 72.222 0.00 0.00 0.00 5.40
879 898 4.394712 CCTCTGTCGCCACACCCC 62.395 72.222 0.00 0.00 0.00 4.95
914 933 1.214325 GCGCAAAACCCCGCTAAAT 59.786 52.632 0.30 0.00 46.14 1.40
915 934 0.389296 GCGCAAAACCCCGCTAAATT 60.389 50.000 0.30 0.00 46.14 1.82
985 1008 1.961394 CGTCGGAGAAGATAATCCCCA 59.039 52.381 0.00 0.00 38.59 4.96
991 1014 2.640332 GAGAAGATAATCCCCAGGACCC 59.360 54.545 0.00 0.00 32.98 4.46
1023 1046 2.990479 GCCGACATCCAGAAGGGT 59.010 61.111 0.00 0.00 38.11 4.34
1081 1104 1.741732 CGAAGCTCATGAAGGTCTGGG 60.742 57.143 0.00 0.00 33.60 4.45
1109 1132 3.391382 CCCCGAGGAAACCGAGCT 61.391 66.667 0.00 0.00 33.47 4.09
1112 1135 2.646175 CCGAGGAAACCGAGCTCCA 61.646 63.158 8.47 0.00 33.83 3.86
1291 1314 1.632948 GGTTGCTTACTCGGTTCGGC 61.633 60.000 0.00 0.00 0.00 5.54
1306 1329 1.083657 CGGCCGCGACGAAATTATG 60.084 57.895 14.67 0.00 35.20 1.90
1427 1450 9.396022 ACTGTATATAGTTAAAATGCTTGCAGT 57.604 29.630 0.87 0.00 0.00 4.40
1446 1469 2.563179 AGTCTCGTGCCTAATGTCTGTT 59.437 45.455 0.00 0.00 0.00 3.16
1612 1635 4.864704 TTGGGGCAGAATTTGTTTCTAC 57.135 40.909 0.00 0.00 42.98 2.59
1613 1636 3.838565 TGGGGCAGAATTTGTTTCTACA 58.161 40.909 0.00 0.00 42.98 2.74
1614 1637 4.219115 TGGGGCAGAATTTGTTTCTACAA 58.781 39.130 0.00 0.00 42.98 2.41
1615 1638 4.837860 TGGGGCAGAATTTGTTTCTACAAT 59.162 37.500 0.00 0.00 42.98 2.71
1616 1639 5.047377 TGGGGCAGAATTTGTTTCTACAATC 60.047 40.000 0.00 0.00 42.98 2.67
1617 1640 5.185828 GGGGCAGAATTTGTTTCTACAATCT 59.814 40.000 0.00 0.00 42.98 2.40
1618 1641 6.295292 GGGGCAGAATTTGTTTCTACAATCTT 60.295 38.462 0.00 0.00 42.98 2.40
1843 1880 3.485013 GCGATAACTACCTAAAGCACGAC 59.515 47.826 0.00 0.00 0.00 4.34
1907 1944 9.646336 GTAGTTGCACAATAAATTACTAATCGG 57.354 33.333 0.00 0.00 0.00 4.18
2261 2298 7.587037 TTGATTCTTGATGTTTTCTTCAGGT 57.413 32.000 0.00 0.00 35.82 4.00
2520 2563 1.301716 GTTCTGGCGCTGGAGTTCA 60.302 57.895 7.64 0.00 0.00 3.18
2628 2671 1.384191 GGCAGAACCTTCACCCCAT 59.616 57.895 0.00 0.00 34.51 4.00
2815 2858 7.148641 CCACGAACTATAGAATGTGAGCTTAT 58.851 38.462 18.11 0.00 0.00 1.73
2889 2932 1.668751 TCGTCAAAGTGCTGAACAACC 59.331 47.619 0.00 0.00 0.00 3.77
2978 3021 9.225682 TCTGAACCTTCCTGGATACTATATTTT 57.774 33.333 0.00 0.00 39.71 1.82
3177 3222 5.566230 ACCGTATCAGGTAGTTCACAAGAAC 60.566 44.000 0.28 0.28 44.51 3.01
3178 3223 7.917141 ACCGTATCAGGTAGTTCACAAGAACA 61.917 42.308 10.56 0.00 46.64 3.18
3247 3292 5.872963 ACGTTTGTTATCCCTAAAACCTCT 58.127 37.500 0.00 0.00 30.47 3.69
3319 3364 8.370182 ACATTGTTGCTTTCTATGATTTCCTTT 58.630 29.630 0.00 0.00 0.00 3.11
3590 3636 2.518112 TGTCTTGCCGCAGCCAAA 60.518 55.556 0.00 0.00 38.69 3.28
3628 3674 1.478105 GGACAAGTTCAATCCCCATGC 59.522 52.381 0.00 0.00 0.00 4.06
3655 3701 2.026822 CAGTGCCATCAAGGGTTAGACT 60.027 50.000 0.00 0.00 38.09 3.24
3771 3817 9.597170 GATTTAATATATTACTCCCTCCGTTCC 57.403 37.037 4.61 0.00 0.00 3.62
3772 3818 8.495160 TTTAATATATTACTCCCTCCGTTCCA 57.505 34.615 4.61 0.00 0.00 3.53
3773 3819 8.495160 TTAATATATTACTCCCTCCGTTCCAA 57.505 34.615 4.61 0.00 0.00 3.53
3774 3820 7.383156 AATATATTACTCCCTCCGTTCCAAA 57.617 36.000 0.00 0.00 0.00 3.28
3775 3821 5.906772 ATATTACTCCCTCCGTTCCAAAT 57.093 39.130 0.00 0.00 0.00 2.32
3776 3822 4.586306 ATTACTCCCTCCGTTCCAAATT 57.414 40.909 0.00 0.00 0.00 1.82
3777 3823 5.703730 ATTACTCCCTCCGTTCCAAATTA 57.296 39.130 0.00 0.00 0.00 1.40
3778 3824 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
3779 3825 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
3780 3826 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
3781 3827 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
3782 3828 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
3783 3829 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
3784 3830 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
3785 3831 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
3786 3832 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
3787 3833 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
3788 3834 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
3789 3835 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
3790 3836 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3791 3837 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3792 3838 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3793 3839 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
3794 3840 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
3795 3841 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
3796 3842 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
3797 3843 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
3798 3844 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
3799 3845 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
3800 3846 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
3801 3847 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
3802 3848 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
3803 3849 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
3804 3850 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
3805 3851 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
3806 3852 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
3807 3853 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
3808 3854 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
3809 3855 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
3810 3856 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
3837 3883 6.567959 ACATCTAGATACATCCATACATGCG 58.432 40.000 4.54 0.00 0.00 4.73
3838 3884 6.378280 ACATCTAGATACATCCATACATGCGA 59.622 38.462 4.54 0.00 0.00 5.10
3839 3885 6.196079 TCTAGATACATCCATACATGCGAC 57.804 41.667 0.00 0.00 0.00 5.19
3840 3886 4.871933 AGATACATCCATACATGCGACA 57.128 40.909 0.00 0.00 0.00 4.35
3841 3887 5.213891 AGATACATCCATACATGCGACAA 57.786 39.130 0.00 0.00 0.00 3.18
3842 3888 5.233225 AGATACATCCATACATGCGACAAG 58.767 41.667 0.00 0.00 0.00 3.16
3843 3889 3.266510 ACATCCATACATGCGACAAGT 57.733 42.857 0.00 0.00 0.00 3.16
3844 3890 4.400529 ACATCCATACATGCGACAAGTA 57.599 40.909 0.00 0.00 0.00 2.24
3845 3891 4.765273 ACATCCATACATGCGACAAGTAA 58.235 39.130 0.00 0.00 0.00 2.24
3846 3892 5.368145 ACATCCATACATGCGACAAGTAAT 58.632 37.500 0.00 0.00 0.00 1.89
3847 3893 5.822519 ACATCCATACATGCGACAAGTAATT 59.177 36.000 0.00 0.00 0.00 1.40
3848 3894 5.984233 TCCATACATGCGACAAGTAATTC 57.016 39.130 0.00 0.00 0.00 2.17
3849 3895 4.506288 TCCATACATGCGACAAGTAATTCG 59.494 41.667 0.00 0.00 38.31 3.34
3850 3896 4.318760 CCATACATGCGACAAGTAATTCGG 60.319 45.833 0.00 0.00 35.73 4.30
3851 3897 2.967362 ACATGCGACAAGTAATTCGGA 58.033 42.857 0.00 0.00 40.02 4.55
3852 3898 3.331150 ACATGCGACAAGTAATTCGGAA 58.669 40.909 0.00 0.00 39.13 4.30
3853 3899 3.124636 ACATGCGACAAGTAATTCGGAAC 59.875 43.478 0.00 0.00 39.13 3.62
3952 4000 3.709653 AGTTCCTAACTGACCACAACTCA 59.290 43.478 0.00 0.00 41.01 3.41
3953 4001 4.348168 AGTTCCTAACTGACCACAACTCAT 59.652 41.667 0.00 0.00 41.01 2.90
4044 4094 3.065925 GGACTAATTGAATGCACTGGAGC 59.934 47.826 0.00 0.00 0.00 4.70
4964 5234 5.298777 GCTGTGAGGAATTGATCAAGCTATT 59.701 40.000 14.54 2.91 32.09 1.73
5063 5333 5.971202 AGAGTGCAAACTGTATTTTTGAACG 59.029 36.000 0.00 0.00 44.34 3.95
5249 5519 1.789576 AATCTTGGTGGGAAGGCGGT 61.790 55.000 0.00 0.00 0.00 5.68
5345 5615 1.514087 CATTTGCTTGGATGCCGCT 59.486 52.632 0.00 0.00 0.00 5.52
5601 5871 7.430502 GCAATCATACTCTTGCTTAATGTTGTC 59.569 37.037 0.27 0.00 43.41 3.18
5903 6173 8.912988 TGGTTTGAAGTCTTAGAATTTGTGATT 58.087 29.630 0.00 0.00 0.00 2.57
6416 6716 7.027161 ACTACAGTGTGATTGTTTTTGTCAAC 58.973 34.615 5.88 0.00 0.00 3.18
6521 6821 5.931294 TGTGTATTCTGGTGTTGTTCCTTA 58.069 37.500 0.00 0.00 0.00 2.69
6526 6826 8.919145 TGTATTCTGGTGTTGTTCCTTATTTTT 58.081 29.630 0.00 0.00 0.00 1.94
6527 6827 9.191995 GTATTCTGGTGTTGTTCCTTATTTTTG 57.808 33.333 0.00 0.00 0.00 2.44
6781 7085 7.667557 TGTCCACATCTTAAGCATATAGTACC 58.332 38.462 0.00 0.00 0.00 3.34
6833 7137 9.474313 AAATGTGTCAGGGCTTTAATCTAATTA 57.526 29.630 0.00 0.00 0.00 1.40
6945 7249 7.557719 ACAGGTCATTCTTTGGTTATTCCATAG 59.442 37.037 0.00 0.00 46.60 2.23
7090 7394 1.203187 TCAAGGCTGAGACTACACCCT 60.203 52.381 0.00 0.00 0.00 4.34
7263 7567 2.732412 TTCTTCTCTCGGCTCAAGTG 57.268 50.000 0.00 0.00 0.00 3.16
7352 7656 3.434319 GGCACACCCATCACAGCG 61.434 66.667 0.00 0.00 0.00 5.18
7619 8281 5.940617 TGGGAAAATCTGAGTTCTTTCTCA 58.059 37.500 0.00 3.36 41.40 3.27
7658 8320 7.025963 CCTCAGCAAATTACTGAATCAAACTC 58.974 38.462 11.14 0.00 43.30 3.01
8061 8723 2.555325 TGAGTTGCAGCAAAAGGATCAG 59.445 45.455 10.11 0.00 0.00 2.90
8133 8800 4.152402 GGCTGGTCTGTTATTGCATATACG 59.848 45.833 0.00 0.00 0.00 3.06
8158 8825 3.480470 ACCAACTGACATGGAAAGAGTG 58.520 45.455 1.99 0.00 40.56 3.51
8203 8870 0.952280 GGTCCTGCTATGATCGACGA 59.048 55.000 0.00 0.00 0.00 4.20
8206 8873 3.553096 GGTCCTGCTATGATCGACGAAAT 60.553 47.826 0.00 1.40 0.00 2.17
8213 8880 5.350091 TGCTATGATCGACGAAATTTTGACA 59.650 36.000 12.54 4.90 0.00 3.58
8356 9023 4.797349 GCAGATAAAATCAGCTTGCAAGTC 59.203 41.667 26.55 18.45 38.58 3.01
8359 9026 0.883833 AAATCAGCTTGCAAGTCCCG 59.116 50.000 26.55 13.07 0.00 5.14
8400 9067 1.981256 AGATTGAACAGTGCCGGTTT 58.019 45.000 1.90 0.00 0.00 3.27
8458 9125 6.882610 TTGTCTCATAAAACTGCTTGACAT 57.117 33.333 0.00 0.00 33.98 3.06
8570 9254 4.406003 GCCCTCCACTGAGAATCTAACTTA 59.594 45.833 0.00 0.00 41.42 2.24
8799 9486 7.039313 ACAAGATAACTGTTCAAAGGTTTCC 57.961 36.000 0.00 0.00 0.00 3.13
8821 9508 2.615447 TCTTTGCTGCCGATTCATGATC 59.385 45.455 0.00 0.00 0.00 2.92
8864 9554 3.857157 GGGGGATATGTTCTGCAACTA 57.143 47.619 0.00 0.00 33.17 2.24
8910 9600 5.894298 AGTCATGTGATGGCCTCTAATTA 57.106 39.130 3.32 0.00 34.84 1.40
8911 9601 6.252599 AGTCATGTGATGGCCTCTAATTAA 57.747 37.500 3.32 0.00 34.84 1.40
9156 9849 3.895656 GGAATGGAAATAACCCCTTAGGC 59.104 47.826 0.00 0.00 40.58 3.93
9189 9895 0.820482 AACCCGCTTTGCTTACGGTT 60.820 50.000 0.00 0.00 45.49 4.44
9311 10025 2.846206 AGACAAATGGAGGGCACAGATA 59.154 45.455 0.00 0.00 0.00 1.98
9363 10077 1.149401 GGCCTCCATGTTAGCCTCC 59.851 63.158 9.28 0.00 42.34 4.30
9365 10079 0.548510 GCCTCCATGTTAGCCTCCTT 59.451 55.000 0.00 0.00 0.00 3.36
9453 10168 1.202582 CTGTGCTCTACGCTTACCAGT 59.797 52.381 0.00 0.00 40.11 4.00
9492 10207 6.969473 GTGCTATCCATTTTTACAGAGAAAGC 59.031 38.462 0.00 0.00 0.00 3.51
9501 10216 6.560253 TTTTACAGAGAAAGCAGCCTTTAG 57.440 37.500 0.00 0.00 41.22 1.85
9651 10366 4.376340 AGGTTGCTTTTCACAAACTCAG 57.624 40.909 0.00 0.00 41.12 3.35
9652 10367 3.763897 AGGTTGCTTTTCACAAACTCAGT 59.236 39.130 0.00 0.00 41.12 3.41
9653 10368 4.105486 GGTTGCTTTTCACAAACTCAGTC 58.895 43.478 0.00 0.00 31.86 3.51
9654 10369 3.673746 TGCTTTTCACAAACTCAGTCG 57.326 42.857 0.00 0.00 0.00 4.18
9655 10370 2.223249 TGCTTTTCACAAACTCAGTCGC 60.223 45.455 0.00 0.00 0.00 5.19
9656 10371 2.854805 GCTTTTCACAAACTCAGTCGCC 60.855 50.000 0.00 0.00 0.00 5.54
9657 10372 2.325583 TTTCACAAACTCAGTCGCCT 57.674 45.000 0.00 0.00 0.00 5.52
9658 10373 3.462483 TTTCACAAACTCAGTCGCCTA 57.538 42.857 0.00 0.00 0.00 3.93
9659 10374 2.724977 TCACAAACTCAGTCGCCTAG 57.275 50.000 0.00 0.00 0.00 3.02
9660 10375 2.235891 TCACAAACTCAGTCGCCTAGA 58.764 47.619 0.00 0.00 0.00 2.43
9671 10386 1.400846 GTCGCCTAGACTCAACGATCA 59.599 52.381 0.00 0.00 46.13 2.92
9684 10399 5.163468 ACTCAACGATCAGTCTTGCTATCAT 60.163 40.000 0.00 0.00 0.00 2.45
9691 10406 6.920210 CGATCAGTCTTGCTATCATAGTTGAA 59.080 38.462 0.00 0.00 34.96 2.69
9693 10408 6.045318 TCAGTCTTGCTATCATAGTTGAAGC 58.955 40.000 0.00 0.00 36.94 3.86
9700 10423 3.753294 ATCATAGTTGAAGCCTACCCG 57.247 47.619 0.00 0.00 34.96 5.28
9728 10451 3.072468 ATTTGCAGCGCCATGGCT 61.072 55.556 33.07 14.30 46.13 4.75
9734 10457 4.479993 AGCGCCATGGCTGACCTC 62.480 66.667 33.07 14.89 42.86 3.85
9735 10458 4.783621 GCGCCATGGCTGACCTCA 62.784 66.667 33.07 0.00 39.32 3.86
9736 10459 2.046023 CGCCATGGCTGACCTCAA 60.046 61.111 33.07 0.00 39.32 3.02
9739 10462 0.682209 GCCATGGCTGACCTCAACAT 60.682 55.000 29.98 0.00 38.26 2.71
9740 10463 1.386533 CCATGGCTGACCTCAACATC 58.613 55.000 0.00 0.00 36.63 3.06
9741 10464 1.386533 CATGGCTGACCTCAACATCC 58.613 55.000 0.00 0.00 36.63 3.51
9742 10465 1.064906 CATGGCTGACCTCAACATCCT 60.065 52.381 0.00 0.00 36.63 3.24
9743 10466 1.067295 TGGCTGACCTCAACATCCTT 58.933 50.000 0.00 0.00 36.63 3.36
9744 10467 1.425066 TGGCTGACCTCAACATCCTTT 59.575 47.619 0.00 0.00 36.63 3.11
9745 10468 2.158475 TGGCTGACCTCAACATCCTTTT 60.158 45.455 0.00 0.00 36.63 2.27
9746 10469 2.893489 GGCTGACCTCAACATCCTTTTT 59.107 45.455 0.00 0.00 0.00 1.94
9785 10512 1.747355 CTCACATCTTGGGCATGAACC 59.253 52.381 0.00 0.00 0.00 3.62
9792 10519 2.022195 CTTGGGCATGAACCATGAGAG 58.978 52.381 10.77 4.97 43.81 3.20
9794 10521 0.257039 GGGCATGAACCATGAGAGGT 59.743 55.000 10.77 0.00 43.81 3.85
9819 10547 2.262303 GGGGTCGATCGATCTCGCT 61.262 63.158 26.40 0.00 38.52 4.93
9822 10550 0.384974 GGTCGATCGATCTCGCTCAC 60.385 60.000 22.50 5.14 38.52 3.51
9825 10553 1.727723 GATCGATCTCGCTCACGCC 60.728 63.158 18.29 0.00 39.84 5.68
9831 10559 4.430423 CTCGCTCACGCCGTTTGC 62.430 66.667 0.00 0.00 39.84 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.881104 ACAACCCCGACCCGCTTT 61.881 61.111 0.00 0.00 0.00 3.51
5 6 4.636435 CACAACCCCGACCCGCTT 62.636 66.667 0.00 0.00 0.00 4.68
13 14 4.722700 CTCCTGCCCACAACCCCG 62.723 72.222 0.00 0.00 0.00 5.73
15 16 3.927481 GAGCTCCTGCCCACAACCC 62.927 68.421 0.87 0.00 40.80 4.11
16 17 2.360475 GAGCTCCTGCCCACAACC 60.360 66.667 0.87 0.00 40.80 3.77
17 18 2.731691 TTCGAGCTCCTGCCCACAAC 62.732 60.000 8.47 0.00 40.80 3.32
18 19 2.454832 CTTCGAGCTCCTGCCCACAA 62.455 60.000 8.47 0.00 40.80 3.33
19 20 2.922503 TTCGAGCTCCTGCCCACA 60.923 61.111 8.47 0.00 40.80 4.17
20 21 2.125350 CTTCGAGCTCCTGCCCAC 60.125 66.667 8.47 0.00 40.80 4.61
21 22 3.393970 CCTTCGAGCTCCTGCCCA 61.394 66.667 8.47 0.00 40.80 5.36
22 23 4.847444 GCCTTCGAGCTCCTGCCC 62.847 72.222 8.47 0.00 40.80 5.36
53 54 2.362397 TCTTGATCTAGTGGATGTCCGC 59.638 50.000 4.43 4.43 46.57 5.54
54 55 4.614764 CGATCTTGATCTAGTGGATGTCCG 60.615 50.000 4.06 0.00 39.43 4.79
55 56 4.321601 CCGATCTTGATCTAGTGGATGTCC 60.322 50.000 4.06 0.00 34.33 4.02
56 57 4.321601 CCCGATCTTGATCTAGTGGATGTC 60.322 50.000 4.06 0.00 34.33 3.06
57 58 3.576118 CCCGATCTTGATCTAGTGGATGT 59.424 47.826 4.06 0.00 34.33 3.06
58 59 3.576118 ACCCGATCTTGATCTAGTGGATG 59.424 47.826 4.06 0.00 34.33 3.51
59 60 3.850752 ACCCGATCTTGATCTAGTGGAT 58.149 45.455 4.06 0.00 37.37 3.41
65 66 4.280929 CACCATGTACCCGATCTTGATCTA 59.719 45.833 8.70 0.00 0.00 1.98
101 102 3.509137 TTCACGGCGTGGGAGTCAC 62.509 63.158 36.30 0.00 42.74 3.67
111 112 2.126071 ACGATCACCTTCACGGCG 60.126 61.111 4.80 4.80 35.61 6.46
112 113 0.389948 AAGACGATCACCTTCACGGC 60.390 55.000 0.00 0.00 35.61 5.68
113 114 1.067846 TGAAGACGATCACCTTCACGG 60.068 52.381 17.76 0.00 42.48 4.94
136 138 3.124636 GTCATCACTTTAATGCCGTCGTT 59.875 43.478 0.00 0.00 0.00 3.85
148 150 2.624838 CCTGCAACTTGGTCATCACTTT 59.375 45.455 0.00 0.00 0.00 2.66
154 156 0.610232 GCCTCCTGCAACTTGGTCAT 60.610 55.000 0.00 0.00 40.77 3.06
184 186 5.005779 GCTCTCATAAACGTTCACGATGAAT 59.994 40.000 6.30 0.00 38.79 2.57
188 190 4.106197 GAGCTCTCATAAACGTTCACGAT 58.894 43.478 6.43 0.00 43.02 3.73
189 191 3.190744 AGAGCTCTCATAAACGTTCACGA 59.809 43.478 11.45 0.00 43.02 4.35
199 201 5.391312 TGCGCAATATAGAGCTCTCATAA 57.609 39.130 22.17 2.19 35.23 1.90
202 204 3.582780 CATGCGCAATATAGAGCTCTCA 58.417 45.455 22.17 10.17 35.23 3.27
212 214 1.202440 CCAAACCAGCATGCGCAATAT 60.202 47.619 17.11 0.00 42.27 1.28
219 221 0.878416 TCGTAACCAAACCAGCATGC 59.122 50.000 10.51 10.51 31.97 4.06
221 223 2.151202 CAGTCGTAACCAAACCAGCAT 58.849 47.619 0.00 0.00 0.00 3.79
235 237 3.250744 CGAACCATTATGACACAGTCGT 58.749 45.455 0.00 0.00 34.95 4.34
241 243 5.365403 TTTCAACCGAACCATTATGACAC 57.635 39.130 0.00 0.00 0.00 3.67
246 248 7.754851 AAGTAGTTTTCAACCGAACCATTAT 57.245 32.000 0.00 0.00 0.00 1.28
249 251 7.754851 ATTAAGTAGTTTTCAACCGAACCAT 57.245 32.000 0.00 0.00 0.00 3.55
255 257 9.940166 ACACTTAAATTAAGTAGTTTTCAACCG 57.060 29.630 16.94 4.46 46.66 4.44
327 329 9.806203 CCAATGACACACAAACAAATATCATAT 57.194 29.630 0.00 0.00 0.00 1.78
328 330 8.801299 ACCAATGACACACAAACAAATATCATA 58.199 29.630 0.00 0.00 0.00 2.15
329 331 7.669427 ACCAATGACACACAAACAAATATCAT 58.331 30.769 0.00 0.00 0.00 2.45
330 332 7.048629 ACCAATGACACACAAACAAATATCA 57.951 32.000 0.00 0.00 0.00 2.15
331 333 7.945033 AACCAATGACACACAAACAAATATC 57.055 32.000 0.00 0.00 0.00 1.63
332 334 7.768120 ACAAACCAATGACACACAAACAAATAT 59.232 29.630 0.00 0.00 0.00 1.28
333 335 7.099764 ACAAACCAATGACACACAAACAAATA 58.900 30.769 0.00 0.00 0.00 1.40
334 336 5.936956 ACAAACCAATGACACACAAACAAAT 59.063 32.000 0.00 0.00 0.00 2.32
335 337 5.300752 ACAAACCAATGACACACAAACAAA 58.699 33.333 0.00 0.00 0.00 2.83
336 338 4.887748 ACAAACCAATGACACACAAACAA 58.112 34.783 0.00 0.00 0.00 2.83
337 339 4.527509 ACAAACCAATGACACACAAACA 57.472 36.364 0.00 0.00 0.00 2.83
338 340 4.328712 GGAACAAACCAATGACACACAAAC 59.671 41.667 0.00 0.00 0.00 2.93
339 341 4.499183 GGAACAAACCAATGACACACAAA 58.501 39.130 0.00 0.00 0.00 2.83
340 342 3.428180 CGGAACAAACCAATGACACACAA 60.428 43.478 0.00 0.00 0.00 3.33
341 343 2.098280 CGGAACAAACCAATGACACACA 59.902 45.455 0.00 0.00 0.00 3.72
342 344 2.726633 CGGAACAAACCAATGACACAC 58.273 47.619 0.00 0.00 0.00 3.82
343 345 1.066303 GCGGAACAAACCAATGACACA 59.934 47.619 0.00 0.00 0.00 3.72
344 346 1.066303 TGCGGAACAAACCAATGACAC 59.934 47.619 0.00 0.00 0.00 3.67
345 347 1.393603 TGCGGAACAAACCAATGACA 58.606 45.000 0.00 0.00 0.00 3.58
346 348 2.327568 CATGCGGAACAAACCAATGAC 58.672 47.619 0.00 0.00 0.00 3.06
347 349 1.336702 GCATGCGGAACAAACCAATGA 60.337 47.619 0.00 0.00 0.00 2.57
348 350 1.070038 GCATGCGGAACAAACCAATG 58.930 50.000 0.00 0.00 0.00 2.82
349 351 0.037419 GGCATGCGGAACAAACCAAT 60.037 50.000 12.44 0.00 0.00 3.16
350 352 1.112315 AGGCATGCGGAACAAACCAA 61.112 50.000 12.44 0.00 31.26 3.67
351 353 0.250945 TAGGCATGCGGAACAAACCA 60.251 50.000 12.44 0.00 31.26 3.67
352 354 0.451783 CTAGGCATGCGGAACAAACC 59.548 55.000 12.44 0.00 0.00 3.27
353 355 1.135689 CACTAGGCATGCGGAACAAAC 60.136 52.381 12.44 0.00 0.00 2.93
354 356 1.164411 CACTAGGCATGCGGAACAAA 58.836 50.000 12.44 0.00 0.00 2.83
355 357 0.036164 ACACTAGGCATGCGGAACAA 59.964 50.000 12.44 0.00 0.00 2.83
356 358 0.899019 TACACTAGGCATGCGGAACA 59.101 50.000 12.44 0.00 0.00 3.18
357 359 2.240493 ATACACTAGGCATGCGGAAC 57.760 50.000 12.44 0.00 0.00 3.62
358 360 2.169561 TCAATACACTAGGCATGCGGAA 59.830 45.455 12.44 0.00 0.00 4.30
359 361 1.760029 TCAATACACTAGGCATGCGGA 59.240 47.619 12.44 0.19 0.00 5.54
360 362 2.238942 TCAATACACTAGGCATGCGG 57.761 50.000 12.44 6.99 0.00 5.69
361 363 4.152402 GGTTATCAATACACTAGGCATGCG 59.848 45.833 12.44 0.00 0.00 4.73
362 364 5.308825 AGGTTATCAATACACTAGGCATGC 58.691 41.667 9.90 9.90 0.00 4.06
363 365 6.425114 GTGAGGTTATCAATACACTAGGCATG 59.575 42.308 0.00 0.00 40.43 4.06
364 366 6.464465 GGTGAGGTTATCAATACACTAGGCAT 60.464 42.308 0.00 0.00 40.43 4.40
365 367 5.163343 GGTGAGGTTATCAATACACTAGGCA 60.163 44.000 0.00 0.00 40.43 4.75
366 368 5.163343 TGGTGAGGTTATCAATACACTAGGC 60.163 44.000 0.00 0.00 40.43 3.93
367 369 6.281405 GTGGTGAGGTTATCAATACACTAGG 58.719 44.000 0.00 0.00 40.43 3.02
368 370 6.098409 AGGTGGTGAGGTTATCAATACACTAG 59.902 42.308 0.00 0.00 40.43 2.57
369 371 5.962031 AGGTGGTGAGGTTATCAATACACTA 59.038 40.000 0.00 0.00 40.43 2.74
370 372 4.783227 AGGTGGTGAGGTTATCAATACACT 59.217 41.667 0.00 0.00 40.43 3.55
371 373 5.099042 AGGTGGTGAGGTTATCAATACAC 57.901 43.478 0.00 0.00 40.43 2.90
372 374 5.249622 TGAAGGTGGTGAGGTTATCAATACA 59.750 40.000 0.00 0.00 40.43 2.29
373 375 5.585047 GTGAAGGTGGTGAGGTTATCAATAC 59.415 44.000 0.00 0.00 40.43 1.89
374 376 5.625886 CGTGAAGGTGGTGAGGTTATCAATA 60.626 44.000 0.00 0.00 40.43 1.90
375 377 4.589908 GTGAAGGTGGTGAGGTTATCAAT 58.410 43.478 0.00 0.00 40.43 2.57
376 378 3.556213 CGTGAAGGTGGTGAGGTTATCAA 60.556 47.826 0.00 0.00 40.43 2.57
377 379 2.028476 CGTGAAGGTGGTGAGGTTATCA 60.028 50.000 0.00 0.00 34.79 2.15
378 380 2.232941 TCGTGAAGGTGGTGAGGTTATC 59.767 50.000 0.00 0.00 0.00 1.75
379 381 2.233922 CTCGTGAAGGTGGTGAGGTTAT 59.766 50.000 0.00 0.00 0.00 1.89
380 382 1.616865 CTCGTGAAGGTGGTGAGGTTA 59.383 52.381 0.00 0.00 0.00 2.85
381 383 0.393077 CTCGTGAAGGTGGTGAGGTT 59.607 55.000 0.00 0.00 0.00 3.50
382 384 1.472662 CCTCGTGAAGGTGGTGAGGT 61.473 60.000 0.00 0.00 41.04 3.85
383 385 1.185618 TCCTCGTGAAGGTGGTGAGG 61.186 60.000 0.12 0.12 46.32 3.86
384 386 0.679505 TTCCTCGTGAAGGTGGTGAG 59.320 55.000 0.00 0.00 46.32 3.51
385 387 0.679505 CTTCCTCGTGAAGGTGGTGA 59.320 55.000 8.86 0.00 45.66 4.02
386 388 3.217242 CTTCCTCGTGAAGGTGGTG 57.783 57.895 8.86 0.00 45.66 4.17
393 395 4.139859 TGTTTGGTAACTTCCTCGTGAA 57.860 40.909 0.00 0.00 35.24 3.18
394 396 3.823281 TGTTTGGTAACTTCCTCGTGA 57.177 42.857 0.00 0.00 35.24 4.35
395 397 3.623960 TGTTGTTTGGTAACTTCCTCGTG 59.376 43.478 0.00 0.00 35.24 4.35
396 398 3.876341 TGTTGTTTGGTAACTTCCTCGT 58.124 40.909 0.00 0.00 35.24 4.18
397 399 4.783242 CATGTTGTTTGGTAACTTCCTCG 58.217 43.478 0.00 0.00 35.24 4.63
398 400 4.546570 GCATGTTGTTTGGTAACTTCCTC 58.453 43.478 0.00 0.00 35.24 3.71
399 401 3.320826 GGCATGTTGTTTGGTAACTTCCT 59.679 43.478 0.00 0.00 35.24 3.36
400 402 3.554129 GGGCATGTTGTTTGGTAACTTCC 60.554 47.826 0.00 0.00 35.24 3.46
401 403 3.320826 AGGGCATGTTGTTTGGTAACTTC 59.679 43.478 0.00 0.00 35.24 3.01
402 404 3.069443 CAGGGCATGTTGTTTGGTAACTT 59.931 43.478 0.00 0.00 35.24 2.66
403 405 2.627699 CAGGGCATGTTGTTTGGTAACT 59.372 45.455 0.00 0.00 35.24 2.24
404 406 2.866065 GCAGGGCATGTTGTTTGGTAAC 60.866 50.000 0.00 0.00 34.75 2.50
405 407 1.342819 GCAGGGCATGTTGTTTGGTAA 59.657 47.619 0.00 0.00 0.00 2.85
406 408 0.965439 GCAGGGCATGTTGTTTGGTA 59.035 50.000 0.00 0.00 0.00 3.25
407 409 1.047596 TGCAGGGCATGTTGTTTGGT 61.048 50.000 0.00 0.00 31.71 3.67
408 410 1.747145 TGCAGGGCATGTTGTTTGG 59.253 52.632 0.00 0.00 31.71 3.28
418 420 2.230992 GTGTTTGATTACATGCAGGGCA 59.769 45.455 2.31 0.00 44.86 5.36
419 421 2.417243 GGTGTTTGATTACATGCAGGGC 60.417 50.000 2.31 0.00 0.00 5.19
420 422 2.824936 TGGTGTTTGATTACATGCAGGG 59.175 45.455 2.31 0.00 0.00 4.45
421 423 4.158209 TCATGGTGTTTGATTACATGCAGG 59.842 41.667 0.00 0.00 38.92 4.85
422 424 5.097529 GTCATGGTGTTTGATTACATGCAG 58.902 41.667 0.00 0.00 38.92 4.41
423 425 4.766373 AGTCATGGTGTTTGATTACATGCA 59.234 37.500 0.00 0.00 38.92 3.96
424 426 5.314923 AGTCATGGTGTTTGATTACATGC 57.685 39.130 0.00 0.00 38.92 4.06
425 427 6.583427 CACAAGTCATGGTGTTTGATTACATG 59.417 38.462 0.00 0.00 40.06 3.21
426 428 6.265196 ACACAAGTCATGGTGTTTGATTACAT 59.735 34.615 0.21 0.00 45.39 2.29
427 429 5.592282 ACACAAGTCATGGTGTTTGATTACA 59.408 36.000 0.21 0.00 45.39 2.41
428 430 6.072112 ACACAAGTCATGGTGTTTGATTAC 57.928 37.500 0.21 0.00 45.39 1.89
437 439 2.384382 GCGAAAACACAAGTCATGGTG 58.616 47.619 0.00 0.00 40.78 4.17
438 440 1.336755 GGCGAAAACACAAGTCATGGT 59.663 47.619 0.00 0.00 0.00 3.55
439 441 1.608590 AGGCGAAAACACAAGTCATGG 59.391 47.619 0.00 0.00 0.00 3.66
440 442 4.481930 TTAGGCGAAAACACAAGTCATG 57.518 40.909 0.00 0.00 0.00 3.07
441 443 4.336993 TGTTTAGGCGAAAACACAAGTCAT 59.663 37.500 14.54 0.00 42.78 3.06
442 444 3.690139 TGTTTAGGCGAAAACACAAGTCA 59.310 39.130 14.54 0.00 42.78 3.41
443 445 4.281525 TGTTTAGGCGAAAACACAAGTC 57.718 40.909 14.54 0.00 42.78 3.01
444 446 4.157105 ACTTGTTTAGGCGAAAACACAAGT 59.843 37.500 17.68 17.68 46.20 3.16
445 447 4.499040 CACTTGTTTAGGCGAAAACACAAG 59.501 41.667 17.15 16.92 46.20 3.16
446 448 4.416620 CACTTGTTTAGGCGAAAACACAA 58.583 39.130 17.15 7.93 46.20 3.33
447 449 3.181495 CCACTTGTTTAGGCGAAAACACA 60.181 43.478 17.15 10.09 46.20 3.72
448 450 3.368495 CCACTTGTTTAGGCGAAAACAC 58.632 45.455 17.15 0.00 46.20 3.32
449 451 2.359531 CCCACTTGTTTAGGCGAAAACA 59.640 45.455 14.54 14.54 45.20 2.83
450 452 2.860971 GCCCACTTGTTTAGGCGAAAAC 60.861 50.000 10.42 10.42 39.35 2.43
451 453 1.338655 GCCCACTTGTTTAGGCGAAAA 59.661 47.619 0.00 0.00 35.30 2.29
452 454 0.955905 GCCCACTTGTTTAGGCGAAA 59.044 50.000 0.00 0.00 35.30 3.46
453 455 2.636299 GCCCACTTGTTTAGGCGAA 58.364 52.632 0.00 0.00 35.30 4.70
454 456 4.390048 GCCCACTTGTTTAGGCGA 57.610 55.556 0.00 0.00 35.30 5.54
456 458 0.317160 GGTTGCCCACTTGTTTAGGC 59.683 55.000 0.00 0.00 45.96 3.93
457 459 1.698506 TGGTTGCCCACTTGTTTAGG 58.301 50.000 0.00 0.00 35.17 2.69
458 460 3.118956 TGTTTGGTTGCCCACTTGTTTAG 60.119 43.478 0.00 0.00 41.67 1.85
459 461 2.832129 TGTTTGGTTGCCCACTTGTTTA 59.168 40.909 0.00 0.00 41.67 2.01
460 462 1.625818 TGTTTGGTTGCCCACTTGTTT 59.374 42.857 0.00 0.00 41.67 2.83
461 463 1.270907 TGTTTGGTTGCCCACTTGTT 58.729 45.000 0.00 0.00 41.67 2.83
462 464 1.066502 GTTGTTTGGTTGCCCACTTGT 60.067 47.619 0.00 0.00 41.67 3.16
463 465 1.650825 GTTGTTTGGTTGCCCACTTG 58.349 50.000 0.00 0.00 41.67 3.16
464 466 0.539518 GGTTGTTTGGTTGCCCACTT 59.460 50.000 0.00 0.00 41.67 3.16
465 467 0.325203 AGGTTGTTTGGTTGCCCACT 60.325 50.000 0.00 0.00 41.67 4.00
466 468 1.067974 GTAGGTTGTTTGGTTGCCCAC 59.932 52.381 0.00 0.00 41.67 4.61
467 469 1.404843 GTAGGTTGTTTGGTTGCCCA 58.595 50.000 0.00 0.00 39.65 5.36
468 470 0.677288 GGTAGGTTGTTTGGTTGCCC 59.323 55.000 0.00 0.00 0.00 5.36
469 471 1.699730 AGGTAGGTTGTTTGGTTGCC 58.300 50.000 0.00 0.00 0.00 4.52
470 472 3.713288 GAAAGGTAGGTTGTTTGGTTGC 58.287 45.455 0.00 0.00 0.00 4.17
471 473 3.379057 ACGAAAGGTAGGTTGTTTGGTTG 59.621 43.478 0.00 0.00 0.00 3.77
472 474 3.623703 ACGAAAGGTAGGTTGTTTGGTT 58.376 40.909 0.00 0.00 0.00 3.67
473 475 3.286329 ACGAAAGGTAGGTTGTTTGGT 57.714 42.857 0.00 0.00 0.00 3.67
474 476 4.603985 GAAACGAAAGGTAGGTTGTTTGG 58.396 43.478 0.00 0.00 30.40 3.28
475 477 4.201841 ACGAAACGAAAGGTAGGTTGTTTG 60.202 41.667 0.00 0.00 30.40 2.93
476 478 3.940852 ACGAAACGAAAGGTAGGTTGTTT 59.059 39.130 0.00 0.00 32.70 2.83
477 479 3.534554 ACGAAACGAAAGGTAGGTTGTT 58.465 40.909 0.00 0.00 0.00 2.83
478 480 3.126073 GACGAAACGAAAGGTAGGTTGT 58.874 45.455 0.00 0.00 0.00 3.32
479 481 2.477754 GGACGAAACGAAAGGTAGGTTG 59.522 50.000 0.00 0.00 0.00 3.77
480 482 2.548707 GGGACGAAACGAAAGGTAGGTT 60.549 50.000 0.00 0.00 0.00 3.50
481 483 1.001293 GGGACGAAACGAAAGGTAGGT 59.999 52.381 0.00 0.00 0.00 3.08
482 484 1.001181 TGGGACGAAACGAAAGGTAGG 59.999 52.381 0.00 0.00 0.00 3.18
483 485 2.064014 GTGGGACGAAACGAAAGGTAG 58.936 52.381 0.00 0.00 0.00 3.18
484 486 1.602668 CGTGGGACGAAACGAAAGGTA 60.603 52.381 0.00 0.00 46.05 3.08
485 487 0.877213 CGTGGGACGAAACGAAAGGT 60.877 55.000 0.00 0.00 46.05 3.50
486 488 1.857364 CGTGGGACGAAACGAAAGG 59.143 57.895 0.00 0.00 46.05 3.11
487 489 1.203313 GCGTGGGACGAAACGAAAG 59.797 57.895 0.00 0.00 46.05 2.62
488 490 1.492319 CTGCGTGGGACGAAACGAAA 61.492 55.000 0.00 0.00 46.05 3.46
489 491 1.952133 CTGCGTGGGACGAAACGAA 60.952 57.895 0.00 0.00 46.05 3.85
490 492 2.355363 CTGCGTGGGACGAAACGA 60.355 61.111 0.00 0.00 46.05 3.85
491 493 3.411351 CCTGCGTGGGACGAAACG 61.411 66.667 0.00 0.00 46.05 3.60
492 494 2.775032 TAGCCTGCGTGGGACGAAAC 62.775 60.000 0.00 0.00 46.05 2.78
493 495 2.501223 CTAGCCTGCGTGGGACGAAA 62.501 60.000 0.00 0.00 46.05 3.46
494 496 2.992689 TAGCCTGCGTGGGACGAA 60.993 61.111 0.00 0.00 46.05 3.85
495 497 3.449227 CTAGCCTGCGTGGGACGA 61.449 66.667 0.00 0.00 46.05 4.20
496 498 2.890847 CTTCTAGCCTGCGTGGGACG 62.891 65.000 0.00 0.00 45.88 4.79
497 499 1.153549 CTTCTAGCCTGCGTGGGAC 60.154 63.158 0.12 0.00 36.00 4.46
498 500 2.359169 CCTTCTAGCCTGCGTGGGA 61.359 63.158 0.12 0.00 36.00 4.37
499 501 1.327690 TACCTTCTAGCCTGCGTGGG 61.328 60.000 0.00 0.00 36.00 4.61
500 502 0.753262 ATACCTTCTAGCCTGCGTGG 59.247 55.000 0.00 0.00 39.35 4.94
501 503 1.858091 CATACCTTCTAGCCTGCGTG 58.142 55.000 0.00 0.00 0.00 5.34
502 504 0.105039 GCATACCTTCTAGCCTGCGT 59.895 55.000 0.00 0.00 0.00 5.24
503 505 0.104855 TGCATACCTTCTAGCCTGCG 59.895 55.000 0.00 0.00 32.42 5.18
504 506 1.139853 ACTGCATACCTTCTAGCCTGC 59.860 52.381 0.00 0.00 0.00 4.85
505 507 2.432146 TGACTGCATACCTTCTAGCCTG 59.568 50.000 0.00 0.00 0.00 4.85
506 508 2.752030 TGACTGCATACCTTCTAGCCT 58.248 47.619 0.00 0.00 0.00 4.58
507 509 3.198872 GTTGACTGCATACCTTCTAGCC 58.801 50.000 0.00 0.00 0.00 3.93
508 510 3.198872 GGTTGACTGCATACCTTCTAGC 58.801 50.000 0.00 0.00 0.00 3.42
509 511 4.471904 TGGTTGACTGCATACCTTCTAG 57.528 45.455 8.36 0.00 33.05 2.43
510 512 4.901197 TTGGTTGACTGCATACCTTCTA 57.099 40.909 8.36 0.00 33.05 2.10
511 513 3.788227 TTGGTTGACTGCATACCTTCT 57.212 42.857 8.36 0.00 33.05 2.85
512 514 3.568007 TGTTTGGTTGACTGCATACCTTC 59.432 43.478 8.36 1.99 33.05 3.46
513 515 3.561143 TGTTTGGTTGACTGCATACCTT 58.439 40.909 8.36 0.00 33.05 3.50
514 516 3.222173 TGTTTGGTTGACTGCATACCT 57.778 42.857 8.36 0.00 33.05 3.08
515 517 4.519540 ATTGTTTGGTTGACTGCATACC 57.480 40.909 0.00 0.00 0.00 2.73
516 518 7.757526 TGTATATTGTTTGGTTGACTGCATAC 58.242 34.615 0.00 0.00 0.00 2.39
517 519 7.826744 TCTGTATATTGTTTGGTTGACTGCATA 59.173 33.333 0.00 0.00 0.00 3.14
518 520 6.658816 TCTGTATATTGTTTGGTTGACTGCAT 59.341 34.615 0.00 0.00 0.00 3.96
519 521 6.000840 TCTGTATATTGTTTGGTTGACTGCA 58.999 36.000 0.00 0.00 0.00 4.41
520 522 6.494893 TCTGTATATTGTTTGGTTGACTGC 57.505 37.500 0.00 0.00 0.00 4.40
521 523 8.044060 ACATCTGTATATTGTTTGGTTGACTG 57.956 34.615 0.00 0.00 0.00 3.51
522 524 8.635765 AACATCTGTATATTGTTTGGTTGACT 57.364 30.769 0.00 0.00 29.60 3.41
552 554 9.376075 TCTCAATTGAAAGTAAACATGCAAAAA 57.624 25.926 9.88 0.00 0.00 1.94
553 555 8.816144 GTCTCAATTGAAAGTAAACATGCAAAA 58.184 29.630 9.88 0.00 0.00 2.44
554 556 7.978414 TGTCTCAATTGAAAGTAAACATGCAAA 59.022 29.630 9.88 0.00 0.00 3.68
555 557 7.487484 TGTCTCAATTGAAAGTAAACATGCAA 58.513 30.769 9.88 0.00 0.00 4.08
556 558 7.036996 TGTCTCAATTGAAAGTAAACATGCA 57.963 32.000 9.88 0.00 0.00 3.96
557 559 9.282247 CTATGTCTCAATTGAAAGTAAACATGC 57.718 33.333 9.88 0.00 0.00 4.06
561 563 9.495754 GCATCTATGTCTCAATTGAAAGTAAAC 57.504 33.333 9.88 2.42 0.00 2.01
562 564 9.230122 TGCATCTATGTCTCAATTGAAAGTAAA 57.770 29.630 9.88 0.00 0.00 2.01
563 565 8.791327 TGCATCTATGTCTCAATTGAAAGTAA 57.209 30.769 9.88 0.00 0.00 2.24
564 566 8.791327 TTGCATCTATGTCTCAATTGAAAGTA 57.209 30.769 9.88 0.28 0.00 2.24
565 567 7.692460 TTGCATCTATGTCTCAATTGAAAGT 57.308 32.000 9.88 0.00 0.00 2.66
566 568 7.167635 GCATTGCATCTATGTCTCAATTGAAAG 59.832 37.037 9.88 0.00 0.00 2.62
567 569 6.976349 GCATTGCATCTATGTCTCAATTGAAA 59.024 34.615 9.88 0.00 0.00 2.69
568 570 6.095720 TGCATTGCATCTATGTCTCAATTGAA 59.904 34.615 7.38 0.00 31.71 2.69
569 571 5.591067 TGCATTGCATCTATGTCTCAATTGA 59.409 36.000 7.38 8.12 31.71 2.57
570 572 5.827666 TGCATTGCATCTATGTCTCAATTG 58.172 37.500 7.38 0.00 31.71 2.32
571 573 6.459670 TTGCATTGCATCTATGTCTCAATT 57.540 33.333 12.95 0.00 38.76 2.32
572 574 5.507482 GCTTGCATTGCATCTATGTCTCAAT 60.507 40.000 12.95 0.00 38.76 2.57
573 575 4.201980 GCTTGCATTGCATCTATGTCTCAA 60.202 41.667 12.95 0.00 38.76 3.02
574 576 3.314357 GCTTGCATTGCATCTATGTCTCA 59.686 43.478 12.95 0.00 38.76 3.27
575 577 3.314357 TGCTTGCATTGCATCTATGTCTC 59.686 43.478 12.95 0.00 38.76 3.36
576 578 3.284617 TGCTTGCATTGCATCTATGTCT 58.715 40.909 12.95 0.00 38.76 3.41
577 579 3.703286 TGCTTGCATTGCATCTATGTC 57.297 42.857 12.95 0.00 38.76 3.06
578 580 4.459390 TTTGCTTGCATTGCATCTATGT 57.541 36.364 12.95 0.00 38.76 2.29
579 581 4.868171 ACTTTTGCTTGCATTGCATCTATG 59.132 37.500 12.95 3.07 38.76 2.23
580 582 5.080969 ACTTTTGCTTGCATTGCATCTAT 57.919 34.783 12.95 1.20 38.76 1.98
581 583 4.524316 ACTTTTGCTTGCATTGCATCTA 57.476 36.364 12.95 2.09 38.76 1.98
582 584 3.396260 ACTTTTGCTTGCATTGCATCT 57.604 38.095 12.95 0.00 38.76 2.90
583 585 4.487948 TCTACTTTTGCTTGCATTGCATC 58.512 39.130 12.95 8.20 38.76 3.91
584 586 4.524316 TCTACTTTTGCTTGCATTGCAT 57.476 36.364 12.95 0.00 38.76 3.96
585 587 4.524316 ATCTACTTTTGCTTGCATTGCA 57.476 36.364 7.38 7.38 38.80 4.08
586 588 4.496895 CGTATCTACTTTTGCTTGCATTGC 59.503 41.667 0.46 0.46 0.00 3.56
587 589 5.030295 CCGTATCTACTTTTGCTTGCATTG 58.970 41.667 0.00 0.00 0.00 2.82
588 590 4.438744 GCCGTATCTACTTTTGCTTGCATT 60.439 41.667 0.00 0.00 0.00 3.56
589 591 3.065371 GCCGTATCTACTTTTGCTTGCAT 59.935 43.478 0.00 0.00 0.00 3.96
590 592 2.418628 GCCGTATCTACTTTTGCTTGCA 59.581 45.455 0.00 0.00 0.00 4.08
591 593 2.418628 TGCCGTATCTACTTTTGCTTGC 59.581 45.455 0.00 0.00 0.00 4.01
592 594 4.678509 TTGCCGTATCTACTTTTGCTTG 57.321 40.909 0.00 0.00 0.00 4.01
593 595 4.517453 TGTTTGCCGTATCTACTTTTGCTT 59.483 37.500 0.00 0.00 0.00 3.91
594 596 4.069304 TGTTTGCCGTATCTACTTTTGCT 58.931 39.130 0.00 0.00 0.00 3.91
595 597 4.413495 TGTTTGCCGTATCTACTTTTGC 57.587 40.909 0.00 0.00 0.00 3.68
596 598 6.141685 GTGTTTGTTTGCCGTATCTACTTTTG 59.858 38.462 0.00 0.00 0.00 2.44
597 599 6.183360 TGTGTTTGTTTGCCGTATCTACTTTT 60.183 34.615 0.00 0.00 0.00 2.27
598 600 5.297278 TGTGTTTGTTTGCCGTATCTACTTT 59.703 36.000 0.00 0.00 0.00 2.66
599 601 4.817464 TGTGTTTGTTTGCCGTATCTACTT 59.183 37.500 0.00 0.00 0.00 2.24
600 602 4.212636 GTGTGTTTGTTTGCCGTATCTACT 59.787 41.667 0.00 0.00 0.00 2.57
601 603 4.460505 GTGTGTTTGTTTGCCGTATCTAC 58.539 43.478 0.00 0.00 0.00 2.59
602 604 3.499157 GGTGTGTTTGTTTGCCGTATCTA 59.501 43.478 0.00 0.00 0.00 1.98
603 605 2.292292 GGTGTGTTTGTTTGCCGTATCT 59.708 45.455 0.00 0.00 0.00 1.98
604 606 2.606065 GGGTGTGTTTGTTTGCCGTATC 60.606 50.000 0.00 0.00 0.00 2.24
605 607 1.338655 GGGTGTGTTTGTTTGCCGTAT 59.661 47.619 0.00 0.00 0.00 3.06
606 608 0.739561 GGGTGTGTTTGTTTGCCGTA 59.260 50.000 0.00 0.00 0.00 4.02
607 609 1.251527 TGGGTGTGTTTGTTTGCCGT 61.252 50.000 0.00 0.00 0.00 5.68
608 610 0.103937 ATGGGTGTGTTTGTTTGCCG 59.896 50.000 0.00 0.00 0.00 5.69
609 611 1.580815 CATGGGTGTGTTTGTTTGCC 58.419 50.000 0.00 0.00 0.00 4.52
610 612 1.134551 ACCATGGGTGTGTTTGTTTGC 60.135 47.619 18.09 0.00 32.98 3.68
611 613 2.977772 ACCATGGGTGTGTTTGTTTG 57.022 45.000 18.09 0.00 32.98 2.93
622 624 1.225373 ACATGATAGGCACCATGGGT 58.775 50.000 18.09 0.00 43.16 4.51
623 625 2.369983 AACATGATAGGCACCATGGG 57.630 50.000 18.09 6.26 43.16 4.00
624 626 3.068590 GGAAAACATGATAGGCACCATGG 59.931 47.826 11.19 11.19 43.16 3.66
625 627 3.700539 TGGAAAACATGATAGGCACCATG 59.299 43.478 0.00 10.73 44.12 3.66
626 628 3.979911 TGGAAAACATGATAGGCACCAT 58.020 40.909 0.00 0.00 0.00 3.55
627 629 3.448093 TGGAAAACATGATAGGCACCA 57.552 42.857 0.00 0.00 0.00 4.17
628 630 4.799564 TTTGGAAAACATGATAGGCACC 57.200 40.909 0.00 0.00 0.00 5.01
648 650 2.327228 CCTTCGGAGGTGCGTTTTT 58.673 52.632 0.00 0.00 38.32 1.94
649 651 4.058797 CCTTCGGAGGTGCGTTTT 57.941 55.556 0.00 0.00 38.32 2.43
675 677 5.998981 TGTAGCGGAGGATTTCTGTTAAAAA 59.001 36.000 0.00 0.00 34.46 1.94
676 678 5.553123 TGTAGCGGAGGATTTCTGTTAAAA 58.447 37.500 0.00 0.00 34.46 1.52
677 679 5.155278 TGTAGCGGAGGATTTCTGTTAAA 57.845 39.130 0.00 0.00 34.46 1.52
678 680 4.811969 TGTAGCGGAGGATTTCTGTTAA 57.188 40.909 0.00 0.00 34.46 2.01
679 681 5.353394 AATGTAGCGGAGGATTTCTGTTA 57.647 39.130 0.00 0.00 34.46 2.41
680 682 3.914426 ATGTAGCGGAGGATTTCTGTT 57.086 42.857 0.00 0.00 34.46 3.16
681 683 3.914426 AATGTAGCGGAGGATTTCTGT 57.086 42.857 0.00 0.00 34.46 3.41
682 684 6.867662 ATAAAATGTAGCGGAGGATTTCTG 57.132 37.500 0.00 0.00 35.13 3.02
683 685 7.881775 AAATAAAATGTAGCGGAGGATTTCT 57.118 32.000 0.00 0.00 0.00 2.52
691 693 9.589111 GGGAAAAATAAAATAAAATGTAGCGGA 57.411 29.630 0.00 0.00 0.00 5.54
692 694 9.594478 AGGGAAAAATAAAATAAAATGTAGCGG 57.406 29.630 0.00 0.00 0.00 5.52
723 725 3.057245 GCAGAAATCCTCCGCTTCTTTTT 60.057 43.478 0.00 0.00 0.00 1.94
724 726 2.489722 GCAGAAATCCTCCGCTTCTTTT 59.510 45.455 0.00 0.00 0.00 2.27
725 727 2.087646 GCAGAAATCCTCCGCTTCTTT 58.912 47.619 0.00 0.00 0.00 2.52
726 728 1.680249 GGCAGAAATCCTCCGCTTCTT 60.680 52.381 0.00 0.00 0.00 2.52
727 729 0.107459 GGCAGAAATCCTCCGCTTCT 60.107 55.000 0.00 0.00 0.00 2.85
728 730 0.392998 TGGCAGAAATCCTCCGCTTC 60.393 55.000 0.00 0.00 0.00 3.86
729 731 0.678048 GTGGCAGAAATCCTCCGCTT 60.678 55.000 0.00 0.00 0.00 4.68
730 732 1.078143 GTGGCAGAAATCCTCCGCT 60.078 57.895 0.00 0.00 0.00 5.52
731 733 2.464459 CGTGGCAGAAATCCTCCGC 61.464 63.158 0.00 0.00 0.00 5.54
732 734 0.179073 ATCGTGGCAGAAATCCTCCG 60.179 55.000 0.00 0.00 0.00 4.63
808 827 1.127567 TGGAAGACAGGTGGGTCCAG 61.128 60.000 0.00 0.00 38.59 3.86
824 843 1.592400 GGTGAGTCGATGTCCGTGGA 61.592 60.000 0.00 0.00 39.75 4.02
859 878 4.394712 GTGTGGCGACAGAGGGGG 62.395 72.222 0.12 0.00 44.46 5.40
860 879 4.394712 GGTGTGGCGACAGAGGGG 62.395 72.222 0.12 0.00 44.46 4.79
861 880 4.394712 GGGTGTGGCGACAGAGGG 62.395 72.222 0.12 0.00 44.46 4.30
862 881 4.394712 GGGGTGTGGCGACAGAGG 62.395 72.222 0.12 0.00 44.46 3.69
863 882 4.394712 GGGGGTGTGGCGACAGAG 62.395 72.222 0.12 0.00 44.46 3.35
953 972 1.858091 CTCCGACGATTTGGAGGATG 58.142 55.000 0.00 0.00 46.65 3.51
958 977 4.994907 TTATCTTCTCCGACGATTTGGA 57.005 40.909 0.00 0.00 33.72 3.53
991 1014 1.111116 TCGGCGTACATCCCTAAGGG 61.111 60.000 6.85 0.00 46.11 3.95
1054 1077 0.252761 TTCATGAGCTTCGCCATGGA 59.747 50.000 18.40 2.18 37.60 3.41
1055 1078 0.661552 CTTCATGAGCTTCGCCATGG 59.338 55.000 7.63 7.63 37.60 3.66
1058 1081 0.391661 GACCTTCATGAGCTTCGCCA 60.392 55.000 0.00 0.00 0.00 5.69
1063 1086 0.034670 GCCCAGACCTTCATGAGCTT 60.035 55.000 0.00 0.00 0.00 3.74
1065 1088 1.817099 CGCCCAGACCTTCATGAGC 60.817 63.158 0.00 0.00 0.00 4.26
1070 1093 1.077805 TACCTCGCCCAGACCTTCA 59.922 57.895 0.00 0.00 0.00 3.02
1072 1095 0.544595 AAGTACCTCGCCCAGACCTT 60.545 55.000 0.00 0.00 0.00 3.50
1073 1096 0.971447 GAAGTACCTCGCCCAGACCT 60.971 60.000 0.00 0.00 0.00 3.85
1291 1314 1.083657 CGCCATAATTTCGTCGCGG 60.084 57.895 6.13 0.00 36.16 6.46
1297 1320 1.826327 CAGCAACCGCCATAATTTCG 58.174 50.000 0.00 0.00 39.83 3.46
1427 1450 3.325870 CAAACAGACATTAGGCACGAGA 58.674 45.455 0.00 0.00 0.00 4.04
1446 1469 8.713708 TCAGGAACTTAAATAATTGGAACCAA 57.286 30.769 8.75 8.75 34.60 3.67
1612 1635 7.473366 CATTGAGACCTTGATCTTGAAGATTG 58.527 38.462 9.35 3.41 34.53 2.67
1613 1636 6.095160 GCATTGAGACCTTGATCTTGAAGATT 59.905 38.462 9.35 0.00 34.53 2.40
1614 1637 5.589452 GCATTGAGACCTTGATCTTGAAGAT 59.411 40.000 7.53 7.53 37.73 2.40
1615 1638 4.940046 GCATTGAGACCTTGATCTTGAAGA 59.060 41.667 0.00 0.00 0.00 2.87
1616 1639 4.201792 CGCATTGAGACCTTGATCTTGAAG 60.202 45.833 0.00 0.00 0.00 3.02
1617 1640 3.686241 CGCATTGAGACCTTGATCTTGAA 59.314 43.478 0.00 0.00 0.00 2.69
1618 1641 3.055891 TCGCATTGAGACCTTGATCTTGA 60.056 43.478 0.00 0.00 0.00 3.02
1843 1880 6.225703 TCATTTTTCAATTGGAACATTGCG 57.774 33.333 5.42 0.00 39.30 4.85
1907 1944 5.288472 GCGATGTGTTTAAATCATTTCCACC 59.712 40.000 9.21 0.00 0.00 4.61
2520 2563 3.822735 ACTGTAGCACACTTCATGCATTT 59.177 39.130 0.00 0.00 45.92 2.32
2628 2671 4.890158 TCAACTTGGCAGTAGATCTCAA 57.110 40.909 0.00 0.00 30.68 3.02
2815 2858 7.712639 GGATGCAACAATCTACAAGATCTTCTA 59.287 37.037 4.57 0.00 32.89 2.10
2889 2932 4.347876 TGTACCTCCTCCAACATCCATATG 59.652 45.833 0.00 0.00 39.17 1.78
3017 3062 6.071616 GGGACACCTGAACATTAGCATTTTTA 60.072 38.462 0.00 0.00 0.00 1.52
3590 3636 1.427072 CCTCCCCTCACCCACAACTT 61.427 60.000 0.00 0.00 0.00 2.66
3628 3674 0.107312 CCTTGATGGCACTGAGGAGG 60.107 60.000 6.10 0.00 0.00 4.30
3655 3701 6.493802 CCTACCACCTATAATCTGCTCTAACA 59.506 42.308 0.00 0.00 0.00 2.41
3759 3805 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
3760 3806 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
3761 3807 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3762 3808 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3763 3809 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
3764 3810 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
3765 3811 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
3766 3812 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
3767 3813 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
3768 3814 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
3769 3815 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
3770 3816 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
3771 3817 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
3772 3818 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
3773 3819 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
3774 3820 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
3775 3821 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
3776 3822 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
3777 3823 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
3778 3824 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
3779 3825 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
3780 3826 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
3781 3827 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
3782 3828 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
3783 3829 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
3784 3830 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
3811 3857 8.355913 CGCATGTATGGATGTATCTAGATGTAT 58.644 37.037 15.79 9.11 0.00 2.29
3812 3858 7.556275 TCGCATGTATGGATGTATCTAGATGTA 59.444 37.037 15.79 4.44 0.00 2.29
3813 3859 6.378280 TCGCATGTATGGATGTATCTAGATGT 59.622 38.462 15.79 1.25 0.00 3.06
3814 3860 6.694844 GTCGCATGTATGGATGTATCTAGATG 59.305 42.308 15.79 0.00 0.00 2.90
3815 3861 6.378280 TGTCGCATGTATGGATGTATCTAGAT 59.622 38.462 10.73 10.73 0.00 1.98
3816 3862 5.710099 TGTCGCATGTATGGATGTATCTAGA 59.290 40.000 0.00 0.00 0.00 2.43
3817 3863 5.954335 TGTCGCATGTATGGATGTATCTAG 58.046 41.667 0.00 0.00 0.00 2.43
3818 3864 5.975693 TGTCGCATGTATGGATGTATCTA 57.024 39.130 0.00 0.00 0.00 1.98
3819 3865 4.871933 TGTCGCATGTATGGATGTATCT 57.128 40.909 0.00 0.00 0.00 1.98
3820 3866 4.991056 ACTTGTCGCATGTATGGATGTATC 59.009 41.667 0.00 0.00 0.00 2.24
3821 3867 4.960938 ACTTGTCGCATGTATGGATGTAT 58.039 39.130 0.00 0.00 0.00 2.29
3822 3868 4.400529 ACTTGTCGCATGTATGGATGTA 57.599 40.909 0.00 0.00 0.00 2.29
3823 3869 3.266510 ACTTGTCGCATGTATGGATGT 57.733 42.857 0.00 0.00 0.00 3.06
3824 3870 5.929697 ATTACTTGTCGCATGTATGGATG 57.070 39.130 0.00 0.00 0.00 3.51
3825 3871 5.177511 CGAATTACTTGTCGCATGTATGGAT 59.822 40.000 0.00 0.00 0.00 3.41
3826 3872 4.506288 CGAATTACTTGTCGCATGTATGGA 59.494 41.667 0.00 0.00 0.00 3.41
3827 3873 4.318760 CCGAATTACTTGTCGCATGTATGG 60.319 45.833 0.00 4.42 35.93 2.74
3828 3874 4.506288 TCCGAATTACTTGTCGCATGTATG 59.494 41.667 0.00 0.00 35.93 2.39
3829 3875 4.689071 TCCGAATTACTTGTCGCATGTAT 58.311 39.130 0.00 0.00 35.93 2.29
3830 3876 4.112716 TCCGAATTACTTGTCGCATGTA 57.887 40.909 0.00 2.87 35.93 2.29
3831 3877 2.967362 TCCGAATTACTTGTCGCATGT 58.033 42.857 0.00 4.39 35.93 3.21
3832 3878 3.670203 GTTCCGAATTACTTGTCGCATG 58.330 45.455 0.00 0.00 35.93 4.06
3833 3879 2.347452 CGTTCCGAATTACTTGTCGCAT 59.653 45.455 0.00 0.00 35.93 4.73
3834 3880 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
3835 3881 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
3836 3882 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
3837 3883 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3838 3884 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3839 3885 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3840 3886 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
3841 3887 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
3842 3888 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
3843 3889 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
3844 3890 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
3845 3891 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
3846 3892 0.251297 TGTACTCCCTCCGTTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
3847 3893 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
3848 3894 0.822164 AATGTACTCCCTCCGTTCCG 59.178 55.000 0.00 0.00 0.00 4.30
3849 3895 2.762327 TGTAATGTACTCCCTCCGTTCC 59.238 50.000 0.00 0.00 0.00 3.62
3850 3896 3.446516 ACTGTAATGTACTCCCTCCGTTC 59.553 47.826 0.00 0.00 0.00 3.95
3851 3897 3.438183 ACTGTAATGTACTCCCTCCGTT 58.562 45.455 0.00 0.00 0.00 4.44
3852 3898 3.097342 ACTGTAATGTACTCCCTCCGT 57.903 47.619 0.00 0.00 0.00 4.69
3853 3899 3.181478 GGAACTGTAATGTACTCCCTCCG 60.181 52.174 0.00 0.00 0.00 4.63
3854 3900 4.031611 AGGAACTGTAATGTACTCCCTCC 58.968 47.826 0.00 0.00 37.18 4.30
3855 3901 5.678955 AAGGAACTGTAATGTACTCCCTC 57.321 43.478 0.00 0.00 40.86 4.30
3856 3902 7.182206 ACATAAAGGAACTGTAATGTACTCCCT 59.818 37.037 0.00 0.00 40.86 4.20
3857 3903 7.336396 ACATAAAGGAACTGTAATGTACTCCC 58.664 38.462 0.00 0.00 40.86 4.30
3858 3904 9.530633 CTACATAAAGGAACTGTAATGTACTCC 57.469 37.037 0.00 0.00 40.86 3.85
4044 4094 0.387202 CTGGCTGTCTATGACTCGGG 59.613 60.000 0.00 0.00 33.15 5.14
4101 4151 3.535561 CCTAGAATACAGGCCAGTTGTG 58.464 50.000 5.94 0.00 0.00 3.33
4249 4305 4.631131 CACCGGCATCAGACTAATATGAA 58.369 43.478 0.00 0.00 27.73 2.57
4848 5113 0.030638 AAAACGCTGCACATGTCCAC 59.969 50.000 0.00 0.00 0.00 4.02
4932 5201 4.106029 CAATTCCTCACAGCTGAATTGG 57.894 45.455 23.35 15.94 45.81 3.16
4942 5211 7.496920 CACTAATAGCTTGATCAATTCCTCACA 59.503 37.037 8.96 0.00 0.00 3.58
4964 5234 2.832129 CCCCTTACTGAACTCTGCACTA 59.168 50.000 0.00 0.00 0.00 2.74
5345 5615 8.026607 ACAAAGAAACAAAACGAATCAGAAGAA 58.973 29.630 0.00 0.00 0.00 2.52
5420 5690 2.472695 AAAGCGCAAGAGTGATACCA 57.527 45.000 11.47 0.00 43.02 3.25
5601 5871 2.413437 CTAGTCCTGGATCGCCTGCG 62.413 65.000 4.92 4.92 41.35 5.18
5903 6173 8.469200 CCAAGAGCTTAACATTATTTTGATCCA 58.531 33.333 0.00 0.00 0.00 3.41
6379 6679 4.625311 TCACACTGTAGTAATTGCACATCG 59.375 41.667 0.00 0.00 0.00 3.84
6416 6716 5.171337 GTGTGAGTGCAAAAAGAACATTACG 59.829 40.000 0.00 0.00 0.00 3.18
6479 6779 6.909550 ACACAAGGAAATGGTATTTGCTTA 57.090 33.333 16.89 0.00 37.86 3.09
6521 6821 5.779529 ACATCTCACTGACAAGCAAAAAT 57.220 34.783 0.00 0.00 0.00 1.82
6526 6826 2.899900 ACCTACATCTCACTGACAAGCA 59.100 45.455 0.00 0.00 0.00 3.91
6527 6827 3.601443 ACCTACATCTCACTGACAAGC 57.399 47.619 0.00 0.00 0.00 4.01
6781 7085 7.832503 TTATATGTGGTGATATTGCTCATCG 57.167 36.000 0.00 0.00 0.00 3.84
6851 7155 2.878406 AGCTGCGTGTAGAAAATGTTGT 59.122 40.909 0.00 0.00 0.00 3.32
6855 7159 2.076100 TGGAGCTGCGTGTAGAAAATG 58.924 47.619 0.00 0.00 0.00 2.32
6945 7249 9.255304 TCACATGTAAAAAGGAACTAAAAATGC 57.745 29.630 0.00 0.00 38.49 3.56
7090 7394 5.568825 CGGAACAAAGTCCCTATCTTTCTCA 60.569 44.000 0.00 0.00 33.58 3.27
7263 7567 2.320587 CCGCTGCTGGTTCTGACAC 61.321 63.158 0.00 0.00 0.00 3.67
7292 7596 8.243426 TGCGCTCTCAAATTCAAGTAATATTTT 58.757 29.630 9.73 0.00 0.00 1.82
7352 7656 3.569701 TCACAAGGCTTTCCAATTGTCTC 59.430 43.478 4.43 0.00 30.87 3.36
7465 8127 1.466858 ACAAAATGGGGAGGAGGGAA 58.533 50.000 0.00 0.00 0.00 3.97
7619 8281 4.226427 TGCTGAGGATGAAAACTAGCAT 57.774 40.909 0.00 0.00 35.06 3.79
7818 8480 6.332735 TCTTGATGTCATCTAACTATCCGG 57.667 41.667 13.90 0.00 0.00 5.14
8061 8723 3.619233 TTGCTTACGGCTCTTGAAAAC 57.381 42.857 0.00 0.00 42.39 2.43
8102 8765 2.957402 AACAGACCAGCCTTTCATCA 57.043 45.000 0.00 0.00 0.00 3.07
8133 8800 3.068024 TCTTTCCATGTCAGTTGGTTTGC 59.932 43.478 0.00 0.00 35.64 3.68
8142 8809 2.189594 TGGCACTCTTTCCATGTCAG 57.810 50.000 0.00 0.00 0.00 3.51
8158 8825 8.915654 CAGAATTGTAACTGAACTAAAATTGGC 58.084 33.333 0.00 0.00 36.38 4.52
8203 8870 7.909641 GCACAAAAAGCAAGTATGTCAAAATTT 59.090 29.630 0.00 0.00 0.00 1.82
8206 8873 5.871524 TGCACAAAAAGCAAGTATGTCAAAA 59.128 32.000 0.00 0.00 39.39 2.44
8213 8880 7.733402 ATCAAAATGCACAAAAAGCAAGTAT 57.267 28.000 0.00 0.00 46.27 2.12
8356 9023 9.113838 CTTTCCATAATATCATCTAAATCCGGG 57.886 37.037 0.00 0.00 0.00 5.73
8799 9486 2.011947 TCATGAATCGGCAGCAAAGAG 58.988 47.619 0.00 0.00 0.00 2.85
8851 9540 4.680708 CGGTCCATACTAGTTGCAGAACAT 60.681 45.833 0.00 0.00 34.17 2.71
8864 9554 7.941238 ACTATACTGTACATAACGGTCCATACT 59.059 37.037 0.00 0.00 44.84 2.12
8910 9600 2.991250 ACAGAGCTATCCGCACATTTT 58.009 42.857 0.00 0.00 42.61 1.82
8911 9601 2.698855 ACAGAGCTATCCGCACATTT 57.301 45.000 0.00 0.00 42.61 2.32
8984 9674 6.770785 TGTTTCTTTAACATGCTGGAACTAGT 59.229 34.615 0.00 0.00 41.73 2.57
9156 9849 1.401905 GCGGGTTTGCTATTTCTCAGG 59.598 52.381 0.00 0.00 0.00 3.86
9189 9895 5.998553 TGCGTTCGTCCAAATAAAAACATA 58.001 33.333 0.00 0.00 0.00 2.29
9453 10168 4.517075 TGGATAGCACACAAAACAATTCGA 59.483 37.500 0.00 0.00 0.00 3.71
9492 10207 5.571784 TTGATTGAGCAATCTAAAGGCTG 57.428 39.130 20.24 0.00 45.55 4.85
9501 10216 8.246180 TGAAAAAGACCTATTGATTGAGCAATC 58.754 33.333 14.62 14.62 45.55 2.67
9651 10366 1.400846 TGATCGTTGAGTCTAGGCGAC 59.599 52.381 0.00 0.00 43.17 5.19
9652 10367 1.671328 CTGATCGTTGAGTCTAGGCGA 59.329 52.381 0.00 0.00 36.02 5.54
9653 10368 1.402259 ACTGATCGTTGAGTCTAGGCG 59.598 52.381 0.00 0.00 0.00 5.52
9654 10369 2.685897 AGACTGATCGTTGAGTCTAGGC 59.314 50.000 13.09 0.00 45.73 3.93
9655 10370 4.667262 CAAGACTGATCGTTGAGTCTAGG 58.333 47.826 14.74 7.83 46.65 3.02
9656 10371 4.101942 GCAAGACTGATCGTTGAGTCTAG 58.898 47.826 14.74 0.00 46.65 2.43
9657 10372 3.759086 AGCAAGACTGATCGTTGAGTCTA 59.241 43.478 14.74 0.00 46.65 2.59
9659 10374 2.953020 AGCAAGACTGATCGTTGAGTC 58.047 47.619 5.09 5.09 39.18 3.36
9660 10375 4.158579 TGATAGCAAGACTGATCGTTGAGT 59.841 41.667 0.00 0.00 0.00 3.41
9661 10376 4.676546 TGATAGCAAGACTGATCGTTGAG 58.323 43.478 0.00 0.00 0.00 3.02
9671 10386 5.130145 AGGCTTCAACTATGATAGCAAGACT 59.870 40.000 8.31 8.31 39.43 3.24
9684 10399 1.648116 AACCGGGTAGGCTTCAACTA 58.352 50.000 6.32 0.00 46.52 2.24
9771 10498 1.634973 TCTCATGGTTCATGCCCAAGA 59.365 47.619 7.86 8.12 41.18 3.02
9785 10512 0.254178 CCCCAGGTGAACCTCTCATG 59.746 60.000 0.00 0.00 46.65 3.07
9792 10519 1.221021 GATCGACCCCAGGTGAACC 59.779 63.158 0.00 0.00 35.25 3.62
9794 10521 0.686441 ATCGATCGACCCCAGGTGAA 60.686 55.000 22.06 0.00 35.25 3.18
9796 10523 1.109920 AGATCGATCGACCCCAGGTG 61.110 60.000 22.06 0.00 35.25 4.00
9797 10524 0.824182 GAGATCGATCGACCCCAGGT 60.824 60.000 22.06 1.65 39.44 4.00
9798 10525 1.857318 CGAGATCGATCGACCCCAGG 61.857 65.000 22.06 4.17 45.56 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.