Multiple sequence alignment - TraesCS1D01G286900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G286900 chr1D 100.000 3658 0 0 1 3658 385054569 385050912 0.000000e+00 6756.0
1 TraesCS1D01G286900 chr1D 88.636 572 56 4 1535 2105 298606734 298606171 0.000000e+00 688.0
2 TraesCS1D01G286900 chr1D 89.452 493 27 4 2229 2717 298606170 298605699 1.880000e-167 599.0
3 TraesCS1D01G286900 chr1D 100.000 33 0 0 3238 3270 479771470 479771502 1.100000e-05 62.1
4 TraesCS1D01G286900 chr1B 94.579 2066 73 12 1184 3240 517508372 517506337 0.000000e+00 3158.0
5 TraesCS1D01G286900 chr1B 90.841 939 84 2 1647 2584 402044428 402043491 0.000000e+00 1256.0
6 TraesCS1D01G286900 chr1B 95.562 338 14 1 3270 3607 592344572 592344908 1.160000e-149 540.0
7 TraesCS1D01G286900 chr1B 85.177 479 51 12 510 975 517895342 517894871 1.190000e-129 473.0
8 TraesCS1D01G286900 chr1B 94.902 255 13 0 1 255 685742223 685741969 2.050000e-107 399.0
9 TraesCS1D01G286900 chr1B 94.902 255 13 0 1 255 685780849 685780595 2.050000e-107 399.0
10 TraesCS1D01G286900 chr1B 94.902 255 13 0 1 255 685895116 685894862 2.050000e-107 399.0
11 TraesCS1D01G286900 chr1B 94.510 255 14 0 1 255 685867142 685866888 9.520000e-106 394.0
12 TraesCS1D01G286900 chr1B 94.118 255 15 0 1 255 685827729 685827475 4.430000e-104 388.0
13 TraesCS1D01G286900 chr1B 92.810 153 7 1 2569 2717 402041903 402041751 6.150000e-53 219.0
14 TraesCS1D01G286900 chr1B 92.174 115 9 0 1535 1649 402047937 402047823 2.920000e-36 163.0
15 TraesCS1D01G286900 chr1B 94.118 102 6 0 969 1070 517894842 517894741 4.890000e-34 156.0
16 TraesCS1D01G286900 chr1B 90.909 88 8 0 1228 1315 402050342 402050255 6.420000e-23 119.0
17 TraesCS1D01G286900 chr1B 100.000 33 0 0 810 842 517895006 517894974 1.100000e-05 62.1
18 TraesCS1D01G286900 chr1B 100.000 28 0 0 1085 1112 517894696 517894669 7.000000e-03 52.8
19 TraesCS1D01G286900 chr1A 94.544 1503 60 6 1153 2642 485216062 485214569 0.000000e+00 2302.0
20 TraesCS1D01G286900 chr1A 91.075 549 46 3 1967 2514 372396247 372395701 0.000000e+00 739.0
21 TraesCS1D01G286900 chr1A 85.960 698 51 16 297 975 485216999 485216330 0.000000e+00 702.0
22 TraesCS1D01G286900 chr1A 85.308 211 23 6 3033 3240 1605877 1606082 1.030000e-50 211.0
23 TraesCS1D01G286900 chr1A 98.148 54 1 0 1085 1138 485216180 485216127 1.080000e-15 95.3
24 TraesCS1D01G286900 chr1A 97.826 46 1 0 1025 1070 485216268 485216223 3.030000e-11 80.5
25 TraesCS1D01G286900 chr1A 97.143 35 1 0 3234 3268 556419875 556419909 3.940000e-05 60.2
26 TraesCS1D01G286900 chr4D 95.894 341 12 2 3270 3610 58646557 58646219 5.340000e-153 551.0
27 TraesCS1D01G286900 chr4D 95.308 341 15 1 3270 3610 509484695 509485034 1.160000e-149 540.0
28 TraesCS1D01G286900 chr6D 95.601 341 14 1 3270 3610 306705896 306706235 2.480000e-151 545.0
29 TraesCS1D01G286900 chr6D 94.721 341 16 2 3270 3610 473081846 473081508 2.500000e-146 529.0
30 TraesCS1D01G286900 chr6D 96.169 261 10 0 1 261 87377059 87376799 9.390000e-116 427.0
31 TraesCS1D01G286900 chr6D 87.895 190 20 2 3053 3240 181729538 181729726 1.710000e-53 220.0
32 TraesCS1D01G286900 chr7D 95.308 341 15 1 3270 3610 603385766 603386105 1.160000e-149 540.0
33 TraesCS1D01G286900 chr7D 94.902 255 13 0 1 255 519290040 519290294 2.050000e-107 399.0
34 TraesCS1D01G286900 chr7D 86.667 120 10 3 2626 2740 168811102 168810984 1.070000e-25 128.0
35 TraesCS1D01G286900 chr7D 97.368 38 1 0 1535 1572 169040983 169040946 8.480000e-07 65.8
36 TraesCS1D01G286900 chrUn 95.029 342 14 3 3270 3610 132111930 132111591 5.380000e-148 534.0
37 TraesCS1D01G286900 chrUn 94.902 255 13 0 1 255 303752508 303752254 2.050000e-107 399.0
38 TraesCS1D01G286900 chr5B 95.015 341 16 1 3270 3610 391640798 391640459 5.380000e-148 534.0
39 TraesCS1D01G286900 chr5B 88.710 186 17 3 3047 3229 15669008 15669192 1.320000e-54 224.0
40 TraesCS1D01G286900 chr5B 87.565 193 20 4 3051 3240 473808038 473808229 1.710000e-53 220.0
41 TraesCS1D01G286900 chr2D 95.015 341 16 1 3270 3610 13883702 13883363 5.380000e-148 534.0
42 TraesCS1D01G286900 chr2D 89.011 182 18 2 3050 3229 401288918 401289099 1.320000e-54 224.0
43 TraesCS1D01G286900 chr7B 74.409 1270 232 50 1535 2749 134304979 134303748 3.330000e-125 459.0
44 TraesCS1D01G286900 chr7B 87.958 191 19 3 3053 3240 521121070 521120881 4.750000e-54 222.0
45 TraesCS1D01G286900 chr7B 85.000 120 11 4 2626 2740 134303637 134303520 8.300000e-22 115.0
46 TraesCS1D01G286900 chr7B 92.857 42 1 1 3238 3277 688586531 688586490 3.940000e-05 60.2
47 TraesCS1D01G286900 chr7B 100.000 30 0 0 3241 3270 744044717 744044746 5.100000e-04 56.5
48 TraesCS1D01G286900 chr4A 92.157 255 20 0 1 255 612613002 612612748 9.660000e-96 361.0
49 TraesCS1D01G286900 chr7A 83.846 260 32 7 2488 2740 171273746 171273490 4.720000e-59 239.0
50 TraesCS1D01G286900 chr7A 100.000 32 0 0 3238 3269 183836776 183836745 3.940000e-05 60.2
51 TraesCS1D01G286900 chr2A 88.205 195 17 5 3050 3240 127001506 127001698 1.020000e-55 228.0
52 TraesCS1D01G286900 chr2B 88.083 193 19 3 3051 3240 171459768 171459959 3.680000e-55 226.0
53 TraesCS1D01G286900 chr2B 100.000 32 0 0 3238 3269 26954355 26954324 3.940000e-05 60.2
54 TraesCS1D01G286900 chr2B 100.000 31 0 0 3240 3270 115973195 115973165 1.420000e-04 58.4
55 TraesCS1D01G286900 chr2B 100.000 31 0 0 3238 3268 768536758 768536788 1.420000e-04 58.4
56 TraesCS1D01G286900 chr3D 85.784 204 24 4 3041 3240 586959179 586958977 1.030000e-50 211.0
57 TraesCS1D01G286900 chr3D 100.000 29 0 0 492 520 133089972 133089944 2.000000e-03 54.7
58 TraesCS1D01G286900 chr3A 82.993 147 24 1 3090 3235 726971614 726971468 8.240000e-27 132.0
59 TraesCS1D01G286900 chr3A 100.000 31 0 0 3238 3268 27681772 27681742 1.420000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G286900 chr1D 385050912 385054569 3657 True 6756.00 6756 100.0000 1 3658 1 chr1D.!!$R1 3657
1 TraesCS1D01G286900 chr1D 298605699 298606734 1035 True 643.50 688 89.0440 1535 2717 2 chr1D.!!$R2 1182
2 TraesCS1D01G286900 chr1B 517506337 517508372 2035 True 3158.00 3158 94.5790 1184 3240 1 chr1B.!!$R1 2056
3 TraesCS1D01G286900 chr1B 402041751 402050342 8591 True 439.25 1256 91.6835 1228 2717 4 chr1B.!!$R7 1489
4 TraesCS1D01G286900 chr1A 485214569 485216999 2430 True 794.95 2302 94.1195 297 2642 4 chr1A.!!$R2 2345
5 TraesCS1D01G286900 chr1A 372395701 372396247 546 True 739.00 739 91.0750 1967 2514 1 chr1A.!!$R1 547
6 TraesCS1D01G286900 chr7B 134303520 134304979 1459 True 287.00 459 79.7045 1535 2749 2 chr7B.!!$R3 1214

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
282 283 0.039074 GAGCCATCCTCGTCCGTATG 60.039 60.0 0.0 0.0 0.0 2.39 F
1013 1068 0.179176 CAGGTTCTCGTCTCTCTGCG 60.179 60.0 0.0 0.0 0.0 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1492 3700 0.454600 GGTCGCAATCGAGGTGTAGA 59.545 55.0 0.0 0.0 46.46 2.59 R
3012 10542 0.107945 GGCCTGAGAGGTTAGCTGTG 60.108 60.0 0.0 0.0 37.80 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.147436 GAGGCATCATCCTCGAACTC 57.853 55.000 0.00 0.00 42.74 3.01
24 25 0.755686 AGGCATCATCCTCGAACTCC 59.244 55.000 0.00 0.00 0.00 3.85
25 26 0.465705 GGCATCATCCTCGAACTCCA 59.534 55.000 0.00 0.00 0.00 3.86
26 27 1.134401 GGCATCATCCTCGAACTCCAA 60.134 52.381 0.00 0.00 0.00 3.53
27 28 2.208431 GCATCATCCTCGAACTCCAAG 58.792 52.381 0.00 0.00 0.00 3.61
28 29 2.208431 CATCATCCTCGAACTCCAAGC 58.792 52.381 0.00 0.00 0.00 4.01
29 30 0.537188 TCATCCTCGAACTCCAAGCC 59.463 55.000 0.00 0.00 0.00 4.35
30 31 0.462759 CATCCTCGAACTCCAAGCCC 60.463 60.000 0.00 0.00 0.00 5.19
31 32 0.909610 ATCCTCGAACTCCAAGCCCA 60.910 55.000 0.00 0.00 0.00 5.36
32 33 0.909610 TCCTCGAACTCCAAGCCCAT 60.910 55.000 0.00 0.00 0.00 4.00
33 34 0.745845 CCTCGAACTCCAAGCCCATG 60.746 60.000 0.00 0.00 0.00 3.66
34 35 0.745845 CTCGAACTCCAAGCCCATGG 60.746 60.000 4.14 4.14 42.12 3.66
53 54 4.365111 ATTGCCGCAGCCCAGGAA 62.365 61.111 0.00 0.00 38.69 3.36
77 78 4.704833 GAGCGCAACCTGCCCTGA 62.705 66.667 11.47 0.00 41.12 3.86
78 79 3.984193 GAGCGCAACCTGCCCTGAT 62.984 63.158 11.47 0.00 41.12 2.90
79 80 3.064324 GCGCAACCTGCCCTGATT 61.064 61.111 0.30 0.00 41.12 2.57
80 81 2.639327 GCGCAACCTGCCCTGATTT 61.639 57.895 0.30 0.00 41.12 2.17
81 82 1.966762 CGCAACCTGCCCTGATTTT 59.033 52.632 0.00 0.00 41.12 1.82
82 83 1.173043 CGCAACCTGCCCTGATTTTA 58.827 50.000 0.00 0.00 41.12 1.52
83 84 1.135402 CGCAACCTGCCCTGATTTTAC 60.135 52.381 0.00 0.00 41.12 2.01
84 85 1.892474 GCAACCTGCCCTGATTTTACA 59.108 47.619 0.00 0.00 37.42 2.41
85 86 2.497273 GCAACCTGCCCTGATTTTACAT 59.503 45.455 0.00 0.00 37.42 2.29
86 87 3.699038 GCAACCTGCCCTGATTTTACATA 59.301 43.478 0.00 0.00 37.42 2.29
87 88 4.159506 GCAACCTGCCCTGATTTTACATAA 59.840 41.667 0.00 0.00 37.42 1.90
88 89 5.679638 GCAACCTGCCCTGATTTTACATAAG 60.680 44.000 0.00 0.00 37.42 1.73
89 90 4.536765 ACCTGCCCTGATTTTACATAAGG 58.463 43.478 0.00 0.00 0.00 2.69
90 91 3.319122 CCTGCCCTGATTTTACATAAGGC 59.681 47.826 0.00 0.00 39.64 4.35
91 92 2.948979 TGCCCTGATTTTACATAAGGCG 59.051 45.455 0.00 0.00 42.14 5.52
92 93 2.293399 GCCCTGATTTTACATAAGGCGG 59.707 50.000 0.00 0.00 0.00 6.13
93 94 2.884639 CCCTGATTTTACATAAGGCGGG 59.115 50.000 0.00 0.00 0.00 6.13
94 95 3.551846 CCTGATTTTACATAAGGCGGGT 58.448 45.455 0.00 0.00 0.00 5.28
95 96 3.564225 CCTGATTTTACATAAGGCGGGTC 59.436 47.826 0.00 0.00 0.00 4.46
96 97 4.196193 CTGATTTTACATAAGGCGGGTCA 58.804 43.478 0.00 0.00 0.00 4.02
97 98 4.590918 TGATTTTACATAAGGCGGGTCAA 58.409 39.130 0.00 0.00 0.00 3.18
98 99 5.010933 TGATTTTACATAAGGCGGGTCAAA 58.989 37.500 0.00 0.00 0.00 2.69
99 100 5.477291 TGATTTTACATAAGGCGGGTCAAAA 59.523 36.000 0.00 0.00 0.00 2.44
100 101 5.786264 TTTTACATAAGGCGGGTCAAAAA 57.214 34.783 0.00 0.00 0.00 1.94
116 117 1.185315 AAAAATGGCGATGGTGGAGG 58.815 50.000 0.00 0.00 0.00 4.30
117 118 0.331278 AAAATGGCGATGGTGGAGGA 59.669 50.000 0.00 0.00 0.00 3.71
118 119 0.107017 AAATGGCGATGGTGGAGGAG 60.107 55.000 0.00 0.00 0.00 3.69
119 120 2.615227 AATGGCGATGGTGGAGGAGC 62.615 60.000 0.00 0.00 0.00 4.70
120 121 3.474570 GGCGATGGTGGAGGAGCT 61.475 66.667 0.00 0.00 0.00 4.09
121 122 2.134287 GGCGATGGTGGAGGAGCTA 61.134 63.158 0.00 0.00 0.00 3.32
122 123 1.068250 GCGATGGTGGAGGAGCTAC 59.932 63.158 0.00 0.00 0.00 3.58
123 124 1.395826 GCGATGGTGGAGGAGCTACT 61.396 60.000 0.00 0.00 0.00 2.57
124 125 0.387202 CGATGGTGGAGGAGCTACTG 59.613 60.000 0.99 0.00 0.00 2.74
125 126 1.490574 GATGGTGGAGGAGCTACTGT 58.509 55.000 0.99 0.00 0.00 3.55
126 127 1.137872 GATGGTGGAGGAGCTACTGTG 59.862 57.143 0.99 0.00 0.00 3.66
127 128 0.904865 TGGTGGAGGAGCTACTGTGG 60.905 60.000 0.99 0.00 0.00 4.17
128 129 1.617947 GGTGGAGGAGCTACTGTGGG 61.618 65.000 0.99 0.00 0.00 4.61
129 130 1.306141 TGGAGGAGCTACTGTGGGG 60.306 63.158 0.99 0.00 0.00 4.96
130 131 1.001760 GGAGGAGCTACTGTGGGGA 59.998 63.158 0.99 0.00 0.00 4.81
131 132 1.045911 GGAGGAGCTACTGTGGGGAG 61.046 65.000 0.99 0.00 0.00 4.30
132 133 1.002274 AGGAGCTACTGTGGGGAGG 59.998 63.158 0.00 0.00 0.00 4.30
133 134 1.001760 GGAGCTACTGTGGGGAGGA 59.998 63.158 0.00 0.00 0.00 3.71
134 135 1.045911 GGAGCTACTGTGGGGAGGAG 61.046 65.000 0.00 0.00 0.00 3.69
135 136 2.904131 GCTACTGTGGGGAGGAGC 59.096 66.667 0.00 0.00 42.76 4.70
136 137 1.687493 GCTACTGTGGGGAGGAGCT 60.687 63.158 0.00 0.00 45.38 4.09
137 138 1.681486 GCTACTGTGGGGAGGAGCTC 61.681 65.000 4.71 4.71 45.38 4.09
138 139 1.379977 TACTGTGGGGAGGAGCTCG 60.380 63.158 7.83 0.00 0.00 5.03
139 140 2.151307 TACTGTGGGGAGGAGCTCGT 62.151 60.000 9.04 9.04 0.00 4.18
140 141 2.680352 TGTGGGGAGGAGCTCGTC 60.680 66.667 24.90 24.90 0.00 4.20
141 142 2.363147 GTGGGGAGGAGCTCGTCT 60.363 66.667 29.69 13.67 0.00 4.18
142 143 1.076923 GTGGGGAGGAGCTCGTCTA 60.077 63.158 29.69 16.96 0.00 2.59
143 144 1.104577 GTGGGGAGGAGCTCGTCTAG 61.105 65.000 29.69 0.00 0.00 2.43
144 145 1.279749 TGGGGAGGAGCTCGTCTAGA 61.280 60.000 29.69 14.61 0.00 2.43
146 147 0.536460 GGGAGGAGCTCGTCTAGAGG 60.536 65.000 29.69 6.08 46.91 3.69
147 148 0.470766 GGAGGAGCTCGTCTAGAGGA 59.529 60.000 29.69 14.14 46.91 3.71
148 149 1.589803 GAGGAGCTCGTCTAGAGGAC 58.410 60.000 25.45 8.55 46.91 3.85
149 150 1.140252 GAGGAGCTCGTCTAGAGGACT 59.860 57.143 25.45 12.64 46.91 3.85
150 151 1.134220 AGGAGCTCGTCTAGAGGACTG 60.134 57.143 11.05 4.40 46.91 3.51
151 152 1.305201 GAGCTCGTCTAGAGGACTGG 58.695 60.000 11.05 3.72 46.91 4.00
152 153 0.621609 AGCTCGTCTAGAGGACTGGT 59.378 55.000 11.05 5.89 46.91 4.00
153 154 0.736053 GCTCGTCTAGAGGACTGGTG 59.264 60.000 11.05 3.03 46.91 4.17
154 155 1.384525 CTCGTCTAGAGGACTGGTGG 58.615 60.000 11.05 0.00 43.20 4.61
155 156 0.680280 TCGTCTAGAGGACTGGTGGC 60.680 60.000 11.05 0.00 42.44 5.01
156 157 0.681564 CGTCTAGAGGACTGGTGGCT 60.682 60.000 6.59 0.00 42.44 4.75
157 158 1.408405 CGTCTAGAGGACTGGTGGCTA 60.408 57.143 6.59 0.00 42.44 3.93
158 159 2.303175 GTCTAGAGGACTGGTGGCTAG 58.697 57.143 0.00 0.00 41.46 3.42
159 160 2.092321 GTCTAGAGGACTGGTGGCTAGA 60.092 54.545 0.00 0.00 41.46 2.43
160 161 2.173782 TCTAGAGGACTGGTGGCTAGAG 59.826 54.545 0.00 0.00 34.32 2.43
161 162 0.707616 AGAGGACTGGTGGCTAGAGT 59.292 55.000 0.00 0.00 0.00 3.24
162 163 1.077993 AGAGGACTGGTGGCTAGAGTT 59.922 52.381 0.00 0.00 0.00 3.01
163 164 1.205893 GAGGACTGGTGGCTAGAGTTG 59.794 57.143 0.00 0.00 0.00 3.16
164 165 0.250513 GGACTGGTGGCTAGAGTTGG 59.749 60.000 0.00 0.00 0.00 3.77
165 166 0.391793 GACTGGTGGCTAGAGTTGGC 60.392 60.000 0.00 0.00 0.00 4.52
166 167 0.838122 ACTGGTGGCTAGAGTTGGCT 60.838 55.000 0.00 0.00 0.00 4.75
167 168 0.107945 CTGGTGGCTAGAGTTGGCTC 60.108 60.000 0.00 0.00 41.94 4.70
168 169 1.222113 GGTGGCTAGAGTTGGCTCC 59.778 63.158 0.00 0.00 42.59 4.70
169 170 1.153549 GTGGCTAGAGTTGGCTCCG 60.154 63.158 0.00 0.00 42.59 4.63
170 171 2.359169 TGGCTAGAGTTGGCTCCGG 61.359 63.158 0.00 0.00 42.59 5.14
171 172 2.202946 GCTAGAGTTGGCTCCGGC 60.203 66.667 0.00 0.00 42.59 6.13
172 173 2.105128 CTAGAGTTGGCTCCGGCG 59.895 66.667 0.00 0.00 42.59 6.46
173 174 2.361992 TAGAGTTGGCTCCGGCGA 60.362 61.111 9.30 0.00 42.59 5.54
174 175 2.343163 CTAGAGTTGGCTCCGGCGAG 62.343 65.000 9.30 5.11 42.59 5.03
175 176 2.831894 TAGAGTTGGCTCCGGCGAGA 62.832 60.000 9.30 2.74 42.59 4.04
176 177 3.296709 GAGTTGGCTCCGGCGAGAA 62.297 63.158 9.30 0.00 38.52 2.87
177 178 2.815647 GTTGGCTCCGGCGAGAAG 60.816 66.667 9.30 3.78 38.52 2.85
178 179 4.082523 TTGGCTCCGGCGAGAAGG 62.083 66.667 9.30 0.00 38.52 3.46
180 181 4.821589 GGCTCCGGCGAGAAGGTG 62.822 72.222 9.30 0.00 38.52 4.00
181 182 4.821589 GCTCCGGCGAGAAGGTGG 62.822 72.222 9.30 0.00 38.52 4.61
182 183 4.821589 CTCCGGCGAGAAGGTGGC 62.822 72.222 9.30 0.00 38.52 5.01
187 188 4.821589 GCGAGAAGGTGGCCGGAG 62.822 72.222 5.05 0.00 0.00 4.63
200 201 3.047735 CGGAGGTTTTTGGGTGGC 58.952 61.111 0.00 0.00 0.00 5.01
201 202 1.530655 CGGAGGTTTTTGGGTGGCT 60.531 57.895 0.00 0.00 0.00 4.75
202 203 1.805428 CGGAGGTTTTTGGGTGGCTG 61.805 60.000 0.00 0.00 0.00 4.85
203 204 1.471829 GGAGGTTTTTGGGTGGCTGG 61.472 60.000 0.00 0.00 0.00 4.85
204 205 0.759060 GAGGTTTTTGGGTGGCTGGT 60.759 55.000 0.00 0.00 0.00 4.00
205 206 1.048160 AGGTTTTTGGGTGGCTGGTG 61.048 55.000 0.00 0.00 0.00 4.17
206 207 1.445518 GTTTTTGGGTGGCTGGTGG 59.554 57.895 0.00 0.00 0.00 4.61
207 208 1.002274 TTTTTGGGTGGCTGGTGGT 59.998 52.632 0.00 0.00 0.00 4.16
208 209 0.618968 TTTTTGGGTGGCTGGTGGTT 60.619 50.000 0.00 0.00 0.00 3.67
209 210 1.333636 TTTTGGGTGGCTGGTGGTTG 61.334 55.000 0.00 0.00 0.00 3.77
210 211 3.747521 TTGGGTGGCTGGTGGTTGG 62.748 63.158 0.00 0.00 0.00 3.77
217 218 3.260100 CTGGTGGTTGGCCCTCCT 61.260 66.667 13.33 0.00 45.59 3.69
218 219 3.256960 TGGTGGTTGGCCCTCCTC 61.257 66.667 13.33 9.98 45.59 3.71
219 220 4.048470 GGTGGTTGGCCCTCCTCC 62.048 72.222 15.41 15.41 42.63 4.30
220 221 4.410400 GTGGTTGGCCCTCCTCCG 62.410 72.222 13.33 0.00 32.56 4.63
223 224 4.410400 GTTGGCCCTCCTCCGGTG 62.410 72.222 0.00 0.00 0.00 4.94
224 225 4.649705 TTGGCCCTCCTCCGGTGA 62.650 66.667 4.76 0.31 0.00 4.02
226 227 4.779733 GGCCCTCCTCCGGTGAGA 62.780 72.222 20.62 9.22 41.42 3.27
227 228 2.444895 GCCCTCCTCCGGTGAGAT 60.445 66.667 20.62 0.00 41.42 2.75
228 229 2.801631 GCCCTCCTCCGGTGAGATG 61.802 68.421 20.62 13.76 41.42 2.90
229 230 2.136878 CCCTCCTCCGGTGAGATGG 61.137 68.421 20.62 12.62 41.42 3.51
230 231 1.075970 CCTCCTCCGGTGAGATGGA 60.076 63.158 20.62 10.65 41.42 3.41
233 234 3.543537 CTCCGGTGAGATGGAGGG 58.456 66.667 0.00 0.00 46.55 4.30
234 235 2.041922 TCCGGTGAGATGGAGGGG 60.042 66.667 0.00 0.00 0.00 4.79
235 236 3.164269 CCGGTGAGATGGAGGGGG 61.164 72.222 0.00 0.00 0.00 5.40
277 278 3.917760 CGGGAGCCATCCTCGTCC 61.918 72.222 0.00 0.00 45.85 4.79
278 279 3.917760 GGGAGCCATCCTCGTCCG 61.918 72.222 0.00 0.00 45.85 4.79
279 280 3.148279 GGAGCCATCCTCGTCCGT 61.148 66.667 0.00 0.00 42.94 4.69
280 281 1.826921 GGAGCCATCCTCGTCCGTA 60.827 63.158 0.00 0.00 42.94 4.02
281 282 1.179814 GGAGCCATCCTCGTCCGTAT 61.180 60.000 0.00 0.00 42.94 3.06
282 283 0.039074 GAGCCATCCTCGTCCGTATG 60.039 60.000 0.00 0.00 0.00 2.39
283 284 1.006102 GCCATCCTCGTCCGTATGG 60.006 63.158 0.00 0.00 41.55 2.74
284 285 1.461091 GCCATCCTCGTCCGTATGGA 61.461 60.000 16.72 0.00 41.20 3.41
315 316 2.355007 CGGGTTTGGGATAAGGTTACGT 60.355 50.000 0.00 0.00 0.00 3.57
318 319 3.119743 GGTTTGGGATAAGGTTACGTTGC 60.120 47.826 0.00 0.00 0.00 4.17
328 329 1.539827 GGTTACGTTGCCTGCTTTGAT 59.460 47.619 0.00 0.00 0.00 2.57
345 347 5.967674 GCTTTGATATTGTAGTGACACATGC 59.032 40.000 8.59 0.00 34.48 4.06
352 354 0.603065 TAGTGACACATGCTCACGCT 59.397 50.000 8.59 8.92 42.52 5.07
359 361 2.812609 ATGCTCACGCTGTCGCTG 60.813 61.111 0.00 0.00 39.84 5.18
368 370 2.024319 GCTGTCGCTGTGGTCTCAC 61.024 63.158 0.00 0.00 43.87 3.51
455 457 1.759293 CGCTGACGTGGCATCTGATG 61.759 60.000 13.26 13.26 33.53 3.07
457 459 1.471501 GCTGACGTGGCATCTGATGTA 60.472 52.381 18.19 6.14 0.00 2.29
460 462 2.159240 TGACGTGGCATCTGATGTAGAC 60.159 50.000 18.19 11.29 38.49 2.59
462 464 2.159184 ACGTGGCATCTGATGTAGACAG 60.159 50.000 18.19 8.45 38.49 3.51
467 469 3.118992 GGCATCTGATGTAGACAGTGTGA 60.119 47.826 18.19 0.00 38.49 3.58
486 488 8.506437 CAGTGTGAATGTAAAGAGAATTGCTAA 58.494 33.333 0.00 0.00 0.00 3.09
495 497 7.610305 TGTAAAGAGAATTGCTAAAAGTAGGGG 59.390 37.037 0.00 0.00 0.00 4.79
598 607 1.915141 CTTGAGGCAATGGTCCAACT 58.085 50.000 0.00 0.00 0.00 3.16
608 617 4.380867 GCAATGGTCCAACTAAAGGTCATG 60.381 45.833 0.00 0.00 0.00 3.07
610 619 2.092323 GGTCCAACTAAAGGTCATGGC 58.908 52.381 0.00 0.00 0.00 4.40
611 620 2.554344 GGTCCAACTAAAGGTCATGGCA 60.554 50.000 0.00 0.00 0.00 4.92
612 621 2.749621 GTCCAACTAAAGGTCATGGCAG 59.250 50.000 0.00 0.00 0.00 4.85
613 622 1.474077 CCAACTAAAGGTCATGGCAGC 59.526 52.381 0.00 0.00 0.00 5.25
617 633 1.214305 TAAAGGTCATGGCAGCCCCT 61.214 55.000 9.64 4.87 0.00 4.79
624 640 3.307089 ATGGCAGCCCCTCCCTTTG 62.307 63.158 9.64 0.00 0.00 2.77
625 641 3.984732 GGCAGCCCCTCCCTTTGT 61.985 66.667 0.00 0.00 0.00 2.83
627 643 1.382629 GCAGCCCCTCCCTTTGTTA 59.617 57.895 0.00 0.00 0.00 2.41
721 737 4.863152 AAAACTGAAACAGCAAATGCAC 57.137 36.364 8.28 0.00 45.16 4.57
722 738 2.514205 ACTGAAACAGCAAATGCACC 57.486 45.000 8.28 0.00 45.16 5.01
723 739 1.269206 ACTGAAACAGCAAATGCACCG 60.269 47.619 8.28 0.00 45.16 4.94
724 740 0.743688 TGAAACAGCAAATGCACCGT 59.256 45.000 8.28 0.00 45.16 4.83
725 741 1.130955 GAAACAGCAAATGCACCGTG 58.869 50.000 8.28 0.00 45.16 4.94
726 742 0.743688 AAACAGCAAATGCACCGTGA 59.256 45.000 8.28 0.00 45.16 4.35
727 743 0.743688 AACAGCAAATGCACCGTGAA 59.256 45.000 8.28 0.00 45.16 3.18
728 744 0.743688 ACAGCAAATGCACCGTGAAA 59.256 45.000 8.28 0.00 45.16 2.69
729 745 1.269206 ACAGCAAATGCACCGTGAAAG 60.269 47.619 8.28 0.00 45.16 2.62
730 746 1.001487 CAGCAAATGCACCGTGAAAGA 60.001 47.619 8.28 0.00 45.16 2.52
731 747 1.680735 AGCAAATGCACCGTGAAAGAA 59.319 42.857 8.28 0.00 45.16 2.52
732 748 2.297033 AGCAAATGCACCGTGAAAGAAT 59.703 40.909 8.28 0.00 45.16 2.40
733 749 3.059166 GCAAATGCACCGTGAAAGAATT 58.941 40.909 1.65 0.00 41.59 2.17
734 750 3.494251 GCAAATGCACCGTGAAAGAATTT 59.506 39.130 1.65 0.00 40.68 1.82
735 751 4.024977 GCAAATGCACCGTGAAAGAATTTT 60.025 37.500 1.65 0.00 38.85 1.82
736 752 5.669122 CAAATGCACCGTGAAAGAATTTTC 58.331 37.500 1.65 0.00 39.27 2.29
737 753 3.363341 TGCACCGTGAAAGAATTTTCC 57.637 42.857 1.65 0.00 39.27 3.13
738 754 2.955660 TGCACCGTGAAAGAATTTTCCT 59.044 40.909 1.65 0.00 39.27 3.36
739 755 3.004315 TGCACCGTGAAAGAATTTTCCTC 59.996 43.478 1.65 0.00 39.27 3.71
740 756 3.004315 GCACCGTGAAAGAATTTTCCTCA 59.996 43.478 1.65 0.00 39.27 3.86
741 757 4.537015 CACCGTGAAAGAATTTTCCTCAC 58.463 43.478 10.79 10.79 39.27 3.51
742 758 4.036262 CACCGTGAAAGAATTTTCCTCACA 59.964 41.667 16.89 0.00 39.27 3.58
743 759 4.827284 ACCGTGAAAGAATTTTCCTCACAT 59.173 37.500 16.89 7.16 39.27 3.21
751 767 7.595819 AAGAATTTTCCTCACATGGTTAACA 57.404 32.000 8.10 0.00 0.00 2.41
753 769 8.193953 AGAATTTTCCTCACATGGTTAACATT 57.806 30.769 8.10 0.00 37.84 2.71
792 808 3.452627 AGATGACTACACCCTGAATCCAC 59.547 47.826 0.00 0.00 0.00 4.02
799 815 1.378514 CCCTGAATCCACCCCAACG 60.379 63.158 0.00 0.00 0.00 4.10
805 821 1.539827 GAATCCACCCCAACGAACTTG 59.460 52.381 0.00 0.00 0.00 3.16
819 835 5.654603 ACGAACTTGGATGTATACTGTCA 57.345 39.130 4.17 0.00 0.00 3.58
820 836 6.032956 ACGAACTTGGATGTATACTGTCAA 57.967 37.500 4.17 5.09 0.00 3.18
821 837 6.640518 ACGAACTTGGATGTATACTGTCAAT 58.359 36.000 4.17 0.00 0.00 2.57
822 838 7.103641 ACGAACTTGGATGTATACTGTCAATT 58.896 34.615 4.17 0.00 0.00 2.32
823 839 7.606456 ACGAACTTGGATGTATACTGTCAATTT 59.394 33.333 4.17 6.28 0.00 1.82
824 840 7.904977 CGAACTTGGATGTATACTGTCAATTTG 59.095 37.037 4.17 0.00 0.00 2.32
825 841 8.862325 AACTTGGATGTATACTGTCAATTTGA 57.138 30.769 4.17 0.00 0.00 2.69
826 842 9.466497 AACTTGGATGTATACTGTCAATTTGAT 57.534 29.630 1.78 0.00 0.00 2.57
827 843 9.113838 ACTTGGATGTATACTGTCAATTTGATC 57.886 33.333 1.78 0.00 0.00 2.92
828 844 9.112725 CTTGGATGTATACTGTCAATTTGATCA 57.887 33.333 1.78 0.00 0.00 2.92
830 846 7.224557 TGGATGTATACTGTCAATTTGATCACG 59.775 37.037 1.78 0.00 0.00 4.35
831 847 6.344572 TGTATACTGTCAATTTGATCACGC 57.655 37.500 1.78 0.00 0.00 5.34
832 848 5.872070 TGTATACTGTCAATTTGATCACGCA 59.128 36.000 1.78 0.00 0.00 5.24
845 864 7.433708 TTTGATCACGCAAAAGAATAAGAGA 57.566 32.000 0.00 0.00 35.03 3.10
947 966 1.464997 GTCGAGGATCAGTGGCAAAAC 59.535 52.381 0.00 0.00 33.17 2.43
1000 1055 6.261381 TCAAACACATACAGGTTTACAGGTTC 59.739 38.462 0.00 0.00 35.59 3.62
1001 1056 5.562298 ACACATACAGGTTTACAGGTTCT 57.438 39.130 0.00 0.00 0.00 3.01
1002 1057 5.548406 ACACATACAGGTTTACAGGTTCTC 58.452 41.667 0.00 0.00 0.00 2.87
1003 1058 4.625742 CACATACAGGTTTACAGGTTCTCG 59.374 45.833 0.00 0.00 0.00 4.04
1004 1059 4.282703 ACATACAGGTTTACAGGTTCTCGT 59.717 41.667 0.00 0.00 0.00 4.18
1005 1060 3.382048 ACAGGTTTACAGGTTCTCGTC 57.618 47.619 0.00 0.00 0.00 4.20
1006 1061 2.963782 ACAGGTTTACAGGTTCTCGTCT 59.036 45.455 0.00 0.00 0.00 4.18
1007 1062 3.005578 ACAGGTTTACAGGTTCTCGTCTC 59.994 47.826 0.00 0.00 0.00 3.36
1008 1063 3.256136 CAGGTTTACAGGTTCTCGTCTCT 59.744 47.826 0.00 0.00 0.00 3.10
1009 1064 3.506844 AGGTTTACAGGTTCTCGTCTCTC 59.493 47.826 0.00 0.00 0.00 3.20
1010 1065 3.506844 GGTTTACAGGTTCTCGTCTCTCT 59.493 47.826 0.00 0.00 0.00 3.10
1011 1066 4.477780 GTTTACAGGTTCTCGTCTCTCTG 58.522 47.826 0.00 0.00 0.00 3.35
1012 1067 0.885196 ACAGGTTCTCGTCTCTCTGC 59.115 55.000 0.00 0.00 0.00 4.26
1013 1068 0.179176 CAGGTTCTCGTCTCTCTGCG 60.179 60.000 0.00 0.00 0.00 5.18
1014 1069 0.606944 AGGTTCTCGTCTCTCTGCGT 60.607 55.000 0.00 0.00 0.00 5.24
1015 1070 0.455295 GGTTCTCGTCTCTCTGCGTG 60.455 60.000 0.00 0.00 0.00 5.34
1016 1071 0.517755 GTTCTCGTCTCTCTGCGTGA 59.482 55.000 0.00 0.00 0.00 4.35
1017 1072 0.517755 TTCTCGTCTCTCTGCGTGAC 59.482 55.000 0.00 0.00 31.76 3.67
1018 1073 1.135731 CTCGTCTCTCTGCGTGACC 59.864 63.158 0.00 0.00 33.63 4.02
1019 1074 1.578206 CTCGTCTCTCTGCGTGACCA 61.578 60.000 0.00 0.00 33.63 4.02
1020 1075 1.442857 CGTCTCTCTGCGTGACCAC 60.443 63.158 0.00 0.00 33.63 4.16
1021 1076 1.857318 CGTCTCTCTGCGTGACCACT 61.857 60.000 0.00 0.00 33.63 4.00
1022 1077 0.387878 GTCTCTCTGCGTGACCACTG 60.388 60.000 0.00 0.00 31.57 3.66
1023 1078 1.735920 CTCTCTGCGTGACCACTGC 60.736 63.158 9.03 9.03 0.00 4.40
1059 1114 4.352887 AGAGCGCTACGAAAATAGAACTC 58.647 43.478 11.50 0.00 0.00 3.01
1070 1125 3.784701 AATAGAACTCGACGAGCATGT 57.215 42.857 24.38 14.33 32.04 3.21
1071 1126 4.895224 AATAGAACTCGACGAGCATGTA 57.105 40.909 24.38 15.93 32.04 2.29
1072 1127 2.546195 AGAACTCGACGAGCATGTAC 57.454 50.000 24.38 9.52 32.04 2.90
1073 1128 1.810755 AGAACTCGACGAGCATGTACA 59.189 47.619 24.38 0.00 32.04 2.90
1075 1130 1.450025 ACTCGACGAGCATGTACAGA 58.550 50.000 24.38 0.00 32.04 3.41
1077 1132 2.177977 CTCGACGAGCATGTACAGAAC 58.822 52.381 12.67 0.00 0.00 3.01
1078 1133 1.810755 TCGACGAGCATGTACAGAACT 59.189 47.619 0.33 0.00 0.00 3.01
1080 1135 3.099362 CGACGAGCATGTACAGAACTAC 58.901 50.000 0.33 0.00 0.00 2.73
1082 1137 4.344448 GACGAGCATGTACAGAACTACTC 58.656 47.826 0.33 1.16 0.00 2.59
1083 1138 3.128938 ACGAGCATGTACAGAACTACTCC 59.871 47.826 0.33 0.00 0.00 3.85
1143 1226 4.025401 CAACCACAGCGCGGGTTC 62.025 66.667 24.74 0.00 45.32 3.62
1191 1324 1.435515 GCTCGGCGACTCTCATTCT 59.564 57.895 4.99 0.00 0.00 2.40
1247 1380 3.485431 CGCGCTGAGGTCTTGCAG 61.485 66.667 5.56 0.00 35.28 4.41
1405 2358 7.726033 AGGCAGACAGGGTCTATATAAATAG 57.274 40.000 0.00 0.00 41.37 1.73
1451 3653 2.630592 GAAGCCCCCGTCAGATCGAC 62.631 65.000 7.40 7.40 41.62 4.20
1479 3687 3.776969 TCTGCACCTATTCCAGATCTGTT 59.223 43.478 21.11 8.41 31.16 3.16
1483 3691 4.439289 GCACCTATTCCAGATCTGTTTTGC 60.439 45.833 21.11 14.28 0.00 3.68
1492 3700 2.954318 AGATCTGTTTTGCTGTGTTGCT 59.046 40.909 0.00 0.00 0.00 3.91
1518 3728 2.556622 ACCTCGATTGCGACCAAAATTT 59.443 40.909 0.00 0.00 42.51 1.82
1519 3729 3.005367 ACCTCGATTGCGACCAAAATTTT 59.995 39.130 0.00 0.00 42.51 1.82
1528 3738 5.897050 TGCGACCAAAATTTTGTCTTTAGT 58.103 33.333 25.25 16.33 36.45 2.24
1529 3739 7.028926 TGCGACCAAAATTTTGTCTTTAGTA 57.971 32.000 25.25 10.15 36.45 1.82
1579 3824 2.264794 GGATGTCCAAGCGTCGGT 59.735 61.111 0.00 0.00 35.64 4.69
1680 7325 0.038744 ATGACTGGACCAAGGGCTTG 59.961 55.000 0.00 0.00 40.13 4.01
1696 7341 4.907875 AGGGCTTGGCTATCTACAAGATTA 59.092 41.667 8.45 0.00 45.22 1.75
1743 7394 2.935481 CTGGACTTGGAGCCCCCA 60.935 66.667 0.00 0.00 44.93 4.96
1771 7423 2.094700 CGGCTAGTGTCAGCTTCACTAA 60.095 50.000 21.38 11.07 44.32 2.24
1819 7471 2.291465 GCAGCAATATCTTCATGGCGAA 59.709 45.455 0.00 0.00 0.00 4.70
1997 7652 2.105477 ACAGTCATTTGAGGTGCTGTCT 59.895 45.455 0.00 0.00 32.46 3.41
2038 7702 3.449737 CCACATCCTTCAAATCCAAGCAT 59.550 43.478 0.00 0.00 0.00 3.79
2106 7770 4.346418 AGGATGACATGATCAACTCCTACC 59.654 45.833 14.01 0.00 42.68 3.18
2328 7995 4.717629 TCGCTTCCTGCACCGACG 62.718 66.667 0.00 0.00 43.06 5.12
2741 10265 1.202580 TGGCAATTTTTGTGGAACCCG 60.203 47.619 0.00 0.00 34.36 5.28
2756 10280 2.684843 CCCGCTGAGCTGCTGTTTC 61.685 63.158 7.01 0.00 0.00 2.78
2766 10290 1.241165 CTGCTGTTTCTGCATGTCCA 58.759 50.000 0.00 0.00 37.65 4.02
2807 10331 9.573166 AGATGCCTGCAGTTTAATTACATATAA 57.427 29.630 13.81 0.00 0.00 0.98
2857 10381 8.239314 TGCATTTTCATACAAAAACTTGCAAAA 58.761 25.926 0.00 0.00 39.39 2.44
2869 10393 7.432350 AAAACTTGCAAAATGACTCAAACAA 57.568 28.000 0.00 0.00 0.00 2.83
2930 10454 1.210967 TGCATAAAACCCCCGTCCTAG 59.789 52.381 0.00 0.00 0.00 3.02
2983 10507 0.179108 GGCAGCCGTAAGAGTACCAG 60.179 60.000 0.00 0.00 43.02 4.00
3005 10535 6.293407 CCAGAATTACCCTGTGCATAATAACG 60.293 42.308 0.00 0.00 0.00 3.18
3012 10542 3.304659 CCTGTGCATAATAACGGATTGCC 60.305 47.826 0.00 0.00 0.00 4.52
3037 10567 2.436173 GCTAACCTCTCAGGCCTTGTAT 59.564 50.000 0.00 0.00 39.63 2.29
3042 10572 3.181450 ACCTCTCAGGCCTTGTATAATGC 60.181 47.826 0.00 0.00 39.63 3.56
3045 10575 5.052693 TCTCAGGCCTTGTATAATGCAAT 57.947 39.130 0.00 0.00 0.00 3.56
3059 10589 0.889994 TGCAATGTGCTTAGGCCTTG 59.110 50.000 12.58 5.72 45.31 3.61
3078 10608 5.163754 GCCTTGTACAATGTTAGGTGCTTAG 60.164 44.000 9.13 0.00 0.00 2.18
3079 10609 5.354234 CCTTGTACAATGTTAGGTGCTTAGG 59.646 44.000 9.13 0.00 0.00 2.69
3080 10610 4.839121 TGTACAATGTTAGGTGCTTAGGG 58.161 43.478 0.00 0.00 0.00 3.53
3081 10611 4.532916 TGTACAATGTTAGGTGCTTAGGGA 59.467 41.667 0.00 0.00 0.00 4.20
3082 10612 3.951663 ACAATGTTAGGTGCTTAGGGAC 58.048 45.455 0.00 0.00 0.00 4.46
3083 10613 2.936498 CAATGTTAGGTGCTTAGGGACG 59.064 50.000 0.00 0.00 34.50 4.79
3084 10614 1.636148 TGTTAGGTGCTTAGGGACGT 58.364 50.000 0.00 0.00 36.06 4.34
3085 10615 1.274167 TGTTAGGTGCTTAGGGACGTG 59.726 52.381 0.00 0.00 34.09 4.49
3086 10616 0.248289 TTAGGTGCTTAGGGACGTGC 59.752 55.000 0.00 0.00 34.09 5.34
3087 10617 0.613853 TAGGTGCTTAGGGACGTGCT 60.614 55.000 7.11 0.00 34.09 4.40
3088 10618 1.003718 GGTGCTTAGGGACGTGCTT 60.004 57.895 7.11 0.80 34.50 3.91
3109 10639 7.866898 GTGCTTAAAAATAAACCGGGTTTTCTA 59.133 33.333 28.50 12.84 37.01 2.10
3134 10664 1.485066 ACCGGTGCCTATTTCTACAGG 59.515 52.381 6.12 0.00 35.04 4.00
3135 10665 1.760613 CCGGTGCCTATTTCTACAGGA 59.239 52.381 0.00 0.00 33.42 3.86
3140 10670 4.202172 GGTGCCTATTTCTACAGGAGAGAC 60.202 50.000 0.00 0.00 34.93 3.36
3152 10682 3.181474 ACAGGAGAGACGCCTAATTAAGC 60.181 47.826 0.00 0.00 31.11 3.09
3177 10707 6.982141 CGTTTATCCTATACAAGTAAGCACCA 59.018 38.462 0.00 0.00 0.00 4.17
3178 10708 7.493320 CGTTTATCCTATACAAGTAAGCACCAA 59.507 37.037 0.00 0.00 0.00 3.67
3231 10761 1.072331 CACCTCACCTAAGCACCTTGT 59.928 52.381 0.00 0.00 0.00 3.16
3235 10765 4.042934 ACCTCACCTAAGCACCTTGTATTT 59.957 41.667 0.00 0.00 0.00 1.40
3236 10766 4.396166 CCTCACCTAAGCACCTTGTATTTG 59.604 45.833 0.00 0.00 0.00 2.32
3237 10767 4.980573 TCACCTAAGCACCTTGTATTTGT 58.019 39.130 0.00 0.00 0.00 2.83
3238 10768 6.116711 TCACCTAAGCACCTTGTATTTGTA 57.883 37.500 0.00 0.00 0.00 2.41
3239 10769 5.935789 TCACCTAAGCACCTTGTATTTGTAC 59.064 40.000 0.00 0.00 0.00 2.90
3240 10770 5.123344 CACCTAAGCACCTTGTATTTGTACC 59.877 44.000 0.00 0.00 0.00 3.34
3241 10771 4.331717 CCTAAGCACCTTGTATTTGTACCG 59.668 45.833 0.00 0.00 0.00 4.02
3242 10772 3.688694 AGCACCTTGTATTTGTACCGA 57.311 42.857 0.00 0.00 0.00 4.69
3243 10773 4.010667 AGCACCTTGTATTTGTACCGAA 57.989 40.909 0.00 0.00 0.00 4.30
3244 10774 4.391155 AGCACCTTGTATTTGTACCGAAA 58.609 39.130 0.00 0.00 0.00 3.46
3245 10775 4.822896 AGCACCTTGTATTTGTACCGAAAA 59.177 37.500 0.00 0.00 0.00 2.29
3246 10776 5.299782 AGCACCTTGTATTTGTACCGAAAAA 59.700 36.000 0.00 0.00 0.00 1.94
3247 10777 5.627780 GCACCTTGTATTTGTACCGAAAAAG 59.372 40.000 0.00 0.00 0.00 2.27
3248 10778 6.146898 CACCTTGTATTTGTACCGAAAAAGG 58.853 40.000 8.13 8.13 38.09 3.11
3249 10779 5.242171 ACCTTGTATTTGTACCGAAAAAGGG 59.758 40.000 12.30 0.00 36.74 3.95
3250 10780 5.242171 CCTTGTATTTGTACCGAAAAAGGGT 59.758 40.000 0.00 0.00 41.62 4.34
3251 10781 6.239092 CCTTGTATTTGTACCGAAAAAGGGTT 60.239 38.462 0.00 0.00 38.99 4.11
3252 10782 6.712179 TGTATTTGTACCGAAAAAGGGTTT 57.288 33.333 0.00 0.00 38.99 3.27
3253 10783 6.737118 TGTATTTGTACCGAAAAAGGGTTTC 58.263 36.000 0.00 0.00 38.99 2.78
3254 10784 4.652421 TTTGTACCGAAAAAGGGTTTCC 57.348 40.909 0.00 0.00 38.99 3.13
3255 10785 2.585330 TGTACCGAAAAAGGGTTTCCC 58.415 47.619 0.00 0.00 45.90 3.97
3279 10809 7.958088 CCCCCACTTTGTATTAAAGAAAAAGA 58.042 34.615 9.35 0.00 33.19 2.52
3280 10810 8.425703 CCCCCACTTTGTATTAAAGAAAAAGAA 58.574 33.333 9.35 0.00 33.19 2.52
3281 10811 9.476202 CCCCACTTTGTATTAAAGAAAAAGAAG 57.524 33.333 9.35 3.62 33.19 2.85
3295 10825 7.776933 AGAAAAAGAAGAAGAAACAAATGCC 57.223 32.000 0.00 0.00 0.00 4.40
3296 10826 7.330262 AGAAAAAGAAGAAGAAACAAATGCCA 58.670 30.769 0.00 0.00 0.00 4.92
3297 10827 7.823799 AGAAAAAGAAGAAGAAACAAATGCCAA 59.176 29.630 0.00 0.00 0.00 4.52
3298 10828 6.908870 AAAGAAGAAGAAACAAATGCCAAC 57.091 33.333 0.00 0.00 0.00 3.77
3299 10829 4.948847 AGAAGAAGAAACAAATGCCAACC 58.051 39.130 0.00 0.00 0.00 3.77
3300 10830 4.405358 AGAAGAAGAAACAAATGCCAACCA 59.595 37.500 0.00 0.00 0.00 3.67
3301 10831 4.058721 AGAAGAAACAAATGCCAACCAC 57.941 40.909 0.00 0.00 0.00 4.16
3302 10832 3.450457 AGAAGAAACAAATGCCAACCACA 59.550 39.130 0.00 0.00 0.00 4.17
3303 10833 3.457610 AGAAACAAATGCCAACCACAG 57.542 42.857 0.00 0.00 0.00 3.66
3304 10834 1.866601 GAAACAAATGCCAACCACAGC 59.133 47.619 0.00 0.00 0.00 4.40
3305 10835 0.829333 AACAAATGCCAACCACAGCA 59.171 45.000 0.00 0.00 44.45 4.41
3306 10836 0.390124 ACAAATGCCAACCACAGCAG 59.610 50.000 0.00 0.00 43.38 4.24
3307 10837 0.947180 CAAATGCCAACCACAGCAGC 60.947 55.000 0.00 0.00 43.38 5.25
3308 10838 1.117142 AAATGCCAACCACAGCAGCT 61.117 50.000 0.00 0.00 43.38 4.24
3309 10839 1.530013 AATGCCAACCACAGCAGCTC 61.530 55.000 0.00 0.00 43.38 4.09
3310 10840 3.730761 GCCAACCACAGCAGCTCG 61.731 66.667 0.00 0.00 0.00 5.03
3311 10841 3.052082 CCAACCACAGCAGCTCGG 61.052 66.667 5.91 5.91 0.00 4.63
3312 10842 3.730761 CAACCACAGCAGCTCGGC 61.731 66.667 7.24 0.00 0.00 5.54
3313 10843 4.254709 AACCACAGCAGCTCGGCA 62.255 61.111 7.24 0.00 35.83 5.69
3314 10844 3.772853 AACCACAGCAGCTCGGCAA 62.773 57.895 7.24 0.00 35.83 4.52
3315 10845 2.979676 CCACAGCAGCTCGGCAAA 60.980 61.111 0.00 0.00 35.83 3.68
3316 10846 2.559840 CACAGCAGCTCGGCAAAG 59.440 61.111 0.00 0.00 35.83 2.77
3317 10847 3.360340 ACAGCAGCTCGGCAAAGC 61.360 61.111 0.00 1.50 42.82 3.51
3325 10855 4.751093 TCGGCAAAGCGCGGATGA 62.751 61.111 8.83 0.70 44.29 2.92
3326 10856 4.520846 CGGCAAAGCGCGGATGAC 62.521 66.667 8.83 9.66 43.37 3.06
3327 10857 4.179579 GGCAAAGCGCGGATGACC 62.180 66.667 8.83 9.91 43.84 4.02
3328 10858 4.179579 GCAAAGCGCGGATGACCC 62.180 66.667 8.83 0.00 0.00 4.46
3354 10884 4.476752 GGCGCCCACCGGATACAA 62.477 66.667 18.11 0.00 37.44 2.41
3355 10885 2.437002 GCGCCCACCGGATACAAA 60.437 61.111 9.46 0.00 37.44 2.83
3356 10886 2.757056 GCGCCCACCGGATACAAAC 61.757 63.158 9.46 0.00 37.44 2.93
3357 10887 2.110352 CGCCCACCGGATACAAACC 61.110 63.158 9.46 0.00 0.00 3.27
3358 10888 1.001887 GCCCACCGGATACAAACCA 60.002 57.895 9.46 0.00 0.00 3.67
3359 10889 1.310216 GCCCACCGGATACAAACCAC 61.310 60.000 9.46 0.00 0.00 4.16
3360 10890 0.678684 CCCACCGGATACAAACCACC 60.679 60.000 9.46 0.00 0.00 4.61
3361 10891 0.037017 CCACCGGATACAAACCACCA 59.963 55.000 9.46 0.00 0.00 4.17
3362 10892 1.161843 CACCGGATACAAACCACCAC 58.838 55.000 9.46 0.00 0.00 4.16
3363 10893 0.766131 ACCGGATACAAACCACCACA 59.234 50.000 9.46 0.00 0.00 4.17
3364 10894 1.271163 ACCGGATACAAACCACCACAG 60.271 52.381 9.46 0.00 0.00 3.66
3365 10895 1.002659 CCGGATACAAACCACCACAGA 59.997 52.381 0.00 0.00 0.00 3.41
3366 10896 2.073816 CGGATACAAACCACCACAGAC 58.926 52.381 0.00 0.00 0.00 3.51
3367 10897 2.433436 GGATACAAACCACCACAGACC 58.567 52.381 0.00 0.00 0.00 3.85
3368 10898 2.073816 GATACAAACCACCACAGACCG 58.926 52.381 0.00 0.00 0.00 4.79
3369 10899 1.121378 TACAAACCACCACAGACCGA 58.879 50.000 0.00 0.00 0.00 4.69
3370 10900 0.179056 ACAAACCACCACAGACCGAG 60.179 55.000 0.00 0.00 0.00 4.63
3371 10901 0.884704 CAAACCACCACAGACCGAGG 60.885 60.000 0.00 0.00 0.00 4.63
3372 10902 1.342672 AAACCACCACAGACCGAGGT 61.343 55.000 0.00 0.00 39.49 3.85
3373 10903 1.342672 AACCACCACAGACCGAGGTT 61.343 55.000 0.00 0.00 36.27 3.50
3374 10904 1.004918 CCACCACAGACCGAGGTTC 60.005 63.158 0.00 0.00 36.27 3.62
3375 10905 1.004918 CACCACAGACCGAGGTTCC 60.005 63.158 0.00 0.00 36.27 3.62
3376 10906 2.261671 CCACAGACCGAGGTTCCG 59.738 66.667 0.00 0.00 0.00 4.30
3377 10907 2.273179 CCACAGACCGAGGTTCCGA 61.273 63.158 0.00 0.00 0.00 4.55
3378 10908 1.663739 CACAGACCGAGGTTCCGAA 59.336 57.895 0.00 0.00 0.00 4.30
3379 10909 0.666577 CACAGACCGAGGTTCCGAAC 60.667 60.000 2.37 2.37 0.00 3.95
3393 10923 3.484547 GAACCGCCGCGTACCAAG 61.485 66.667 12.58 0.00 0.00 3.61
3399 10929 3.788766 CCGCGTACCAAGCAGCAC 61.789 66.667 4.92 0.00 34.19 4.40
3400 10930 3.788766 CGCGTACCAAGCAGCACC 61.789 66.667 0.00 0.00 34.19 5.01
3401 10931 2.358737 GCGTACCAAGCAGCACCT 60.359 61.111 0.00 0.00 34.19 4.00
3402 10932 2.391389 GCGTACCAAGCAGCACCTC 61.391 63.158 0.00 0.00 34.19 3.85
3403 10933 1.741770 CGTACCAAGCAGCACCTCC 60.742 63.158 0.00 0.00 0.00 4.30
3404 10934 1.374947 GTACCAAGCAGCACCTCCA 59.625 57.895 0.00 0.00 0.00 3.86
3405 10935 0.250727 GTACCAAGCAGCACCTCCAA 60.251 55.000 0.00 0.00 0.00 3.53
3406 10936 0.036732 TACCAAGCAGCACCTCCAAG 59.963 55.000 0.00 0.00 0.00 3.61
3407 10937 1.073722 CCAAGCAGCACCTCCAAGA 59.926 57.895 0.00 0.00 0.00 3.02
3408 10938 0.538057 CCAAGCAGCACCTCCAAGAA 60.538 55.000 0.00 0.00 0.00 2.52
3409 10939 0.879765 CAAGCAGCACCTCCAAGAAG 59.120 55.000 0.00 0.00 0.00 2.85
3410 10940 0.251077 AAGCAGCACCTCCAAGAAGG 60.251 55.000 0.00 0.00 42.55 3.46
3411 10941 1.130054 AGCAGCACCTCCAAGAAGGA 61.130 55.000 0.00 0.00 46.75 3.36
3420 10950 1.808411 TCCAAGAAGGAATGCGACAC 58.192 50.000 0.00 0.00 45.65 3.67
3421 10951 0.804989 CCAAGAAGGAATGCGACACC 59.195 55.000 0.00 0.00 41.22 4.16
3422 10952 0.443869 CAAGAAGGAATGCGACACCG 59.556 55.000 0.00 0.00 39.16 4.94
3423 10953 0.320374 AAGAAGGAATGCGACACCGA 59.680 50.000 0.00 0.00 38.22 4.69
3424 10954 0.389948 AGAAGGAATGCGACACCGAC 60.390 55.000 0.00 0.00 38.22 4.79
3425 10955 1.683790 GAAGGAATGCGACACCGACG 61.684 60.000 0.00 0.00 38.22 5.12
3426 10956 2.126228 GGAATGCGACACCGACGA 60.126 61.111 0.00 0.00 38.22 4.20
3427 10957 2.442188 GGAATGCGACACCGACGAC 61.442 63.158 0.00 0.00 38.22 4.34
3428 10958 2.774951 GAATGCGACACCGACGACG 61.775 63.158 0.00 0.00 38.22 5.12
3433 10963 4.702081 GACACCGACGACGCTGCT 62.702 66.667 0.64 0.00 38.29 4.24
3446 10976 2.743928 CTGCTGCCCGGACAAGTC 60.744 66.667 0.73 0.00 0.00 3.01
3447 10977 4.329545 TGCTGCCCGGACAAGTCC 62.330 66.667 0.73 9.22 46.18 3.85
3452 10982 2.732619 GCCCGGACAAGTCCTAGGG 61.733 68.421 21.41 21.41 46.90 3.53
3457 10987 2.783609 GGACAAGTCCTAGGGTTTCC 57.216 55.000 9.46 8.94 46.16 3.13
3458 10988 1.281287 GGACAAGTCCTAGGGTTTCCC 59.719 57.143 9.46 4.10 46.16 3.97
3485 11015 3.330720 GGAGGGAGGTGGGTGGTG 61.331 72.222 0.00 0.00 0.00 4.17
3486 11016 2.203938 GAGGGAGGTGGGTGGTGA 60.204 66.667 0.00 0.00 0.00 4.02
3487 11017 1.846124 GAGGGAGGTGGGTGGTGAA 60.846 63.158 0.00 0.00 0.00 3.18
3488 11018 1.151587 AGGGAGGTGGGTGGTGAAT 60.152 57.895 0.00 0.00 0.00 2.57
3489 11019 0.120377 AGGGAGGTGGGTGGTGAATA 59.880 55.000 0.00 0.00 0.00 1.75
3490 11020 0.255033 GGGAGGTGGGTGGTGAATAC 59.745 60.000 0.00 0.00 0.00 1.89
3501 11031 3.148340 GTGAATACCACCCGACACC 57.852 57.895 0.00 0.00 39.86 4.16
3502 11032 0.392060 GTGAATACCACCCGACACCC 60.392 60.000 0.00 0.00 39.86 4.61
3503 11033 0.545787 TGAATACCACCCGACACCCT 60.546 55.000 0.00 0.00 0.00 4.34
3504 11034 0.177373 GAATACCACCCGACACCCTC 59.823 60.000 0.00 0.00 0.00 4.30
3505 11035 1.269703 AATACCACCCGACACCCTCC 61.270 60.000 0.00 0.00 0.00 4.30
3506 11036 2.465010 ATACCACCCGACACCCTCCA 62.465 60.000 0.00 0.00 0.00 3.86
3507 11037 3.706373 CCACCCGACACCCTCCAG 61.706 72.222 0.00 0.00 0.00 3.86
3508 11038 3.706373 CACCCGACACCCTCCAGG 61.706 72.222 0.00 0.00 43.78 4.45
3509 11039 3.923645 ACCCGACACCCTCCAGGA 61.924 66.667 0.00 0.00 39.89 3.86
3510 11040 2.606519 CCCGACACCCTCCAGGAA 60.607 66.667 0.00 0.00 39.89 3.36
3511 11041 2.660064 CCCGACACCCTCCAGGAAG 61.660 68.421 0.00 0.00 39.89 3.46
3512 11042 2.660064 CCGACACCCTCCAGGAAGG 61.660 68.421 1.97 1.97 39.89 3.46
3513 11043 1.609501 CGACACCCTCCAGGAAGGA 60.610 63.158 11.56 0.00 46.75 3.36
3521 11051 1.691219 TCCAGGAAGGAATGGTGGC 59.309 57.895 0.00 0.00 45.65 5.01
3522 11052 1.139498 TCCAGGAAGGAATGGTGGCA 61.139 55.000 0.00 0.00 45.65 4.92
3523 11053 0.967380 CCAGGAAGGAATGGTGGCAC 60.967 60.000 9.70 9.70 41.22 5.01
3524 11054 0.967380 CAGGAAGGAATGGTGGCACC 60.967 60.000 29.75 29.75 39.22 5.01
3525 11055 1.682344 GGAAGGAATGGTGGCACCC 60.682 63.158 32.61 17.83 37.50 4.61
3526 11056 2.035626 AAGGAATGGTGGCACCCG 59.964 61.111 32.61 0.00 37.50 5.28
3527 11057 4.740822 AGGAATGGTGGCACCCGC 62.741 66.667 32.61 20.81 37.50 6.13
3529 11059 3.443045 GAATGGTGGCACCCGCAG 61.443 66.667 32.61 0.00 41.24 5.18
3542 11072 3.036084 CGCAGGTGTCACCACGTC 61.036 66.667 24.02 8.48 41.95 4.34
3543 11073 3.036084 GCAGGTGTCACCACGTCG 61.036 66.667 24.02 7.75 41.95 5.12
3544 11074 2.725641 CAGGTGTCACCACGTCGA 59.274 61.111 24.02 0.00 41.95 4.20
3545 11075 1.371758 CAGGTGTCACCACGTCGAG 60.372 63.158 24.02 1.21 41.95 4.04
3546 11076 2.049433 GGTGTCACCACGTCGAGG 60.049 66.667 17.59 7.20 42.80 4.63
3547 11077 2.733593 GTGTCACCACGTCGAGGC 60.734 66.667 8.77 0.00 0.00 4.70
3548 11078 3.986006 TGTCACCACGTCGAGGCC 61.986 66.667 8.77 0.00 0.00 5.19
3565 11095 2.438434 CGAAGCCGGCAGGGATTT 60.438 61.111 31.54 13.38 46.60 2.17
3566 11096 2.472909 CGAAGCCGGCAGGGATTTC 61.473 63.158 31.54 20.65 46.60 2.17
3567 11097 1.077429 GAAGCCGGCAGGGATTTCT 60.077 57.895 31.54 0.00 46.60 2.52
3568 11098 1.077429 AAGCCGGCAGGGATTTCTC 60.077 57.895 31.54 0.00 43.35 2.87
3569 11099 2.517166 GCCGGCAGGGATTTCTCC 60.517 66.667 24.80 0.00 41.26 3.71
3578 11108 3.808984 GGATTTCTCCCGCATTCCT 57.191 52.632 0.00 0.00 35.28 3.36
3579 11109 2.930826 GGATTTCTCCCGCATTCCTA 57.069 50.000 0.00 0.00 35.28 2.94
3580 11110 2.772287 GGATTTCTCCCGCATTCCTAG 58.228 52.381 0.00 0.00 35.28 3.02
3581 11111 2.368875 GGATTTCTCCCGCATTCCTAGA 59.631 50.000 0.00 0.00 35.28 2.43
3582 11112 2.981859 TTTCTCCCGCATTCCTAGAC 57.018 50.000 0.00 0.00 0.00 2.59
3583 11113 1.120530 TTCTCCCGCATTCCTAGACC 58.879 55.000 0.00 0.00 0.00 3.85
3584 11114 0.759436 TCTCCCGCATTCCTAGACCC 60.759 60.000 0.00 0.00 0.00 4.46
3585 11115 1.002403 TCCCGCATTCCTAGACCCA 59.998 57.895 0.00 0.00 0.00 4.51
3586 11116 0.619255 TCCCGCATTCCTAGACCCAA 60.619 55.000 0.00 0.00 0.00 4.12
3587 11117 0.463833 CCCGCATTCCTAGACCCAAC 60.464 60.000 0.00 0.00 0.00 3.77
3588 11118 0.463833 CCGCATTCCTAGACCCAACC 60.464 60.000 0.00 0.00 0.00 3.77
3589 11119 0.810031 CGCATTCCTAGACCCAACCG 60.810 60.000 0.00 0.00 0.00 4.44
3590 11120 1.095807 GCATTCCTAGACCCAACCGC 61.096 60.000 0.00 0.00 0.00 5.68
3591 11121 0.463833 CATTCCTAGACCCAACCGCC 60.464 60.000 0.00 0.00 0.00 6.13
3592 11122 1.632965 ATTCCTAGACCCAACCGCCC 61.633 60.000 0.00 0.00 0.00 6.13
3593 11123 3.006728 CCTAGACCCAACCGCCCA 61.007 66.667 0.00 0.00 0.00 5.36
3594 11124 2.598787 CCTAGACCCAACCGCCCAA 61.599 63.158 0.00 0.00 0.00 4.12
3595 11125 1.376812 CTAGACCCAACCGCCCAAC 60.377 63.158 0.00 0.00 0.00 3.77
3596 11126 2.814913 CTAGACCCAACCGCCCAACC 62.815 65.000 0.00 0.00 0.00 3.77
3605 11135 3.131478 CGCCCAACCGGATGGAAC 61.131 66.667 30.96 20.55 43.54 3.62
3606 11136 2.754254 GCCCAACCGGATGGAACC 60.754 66.667 30.96 15.04 43.54 3.62
3615 11145 3.446507 GGATGGAACCGACGCTTAA 57.553 52.632 0.00 0.00 0.00 1.85
3616 11146 1.949465 GGATGGAACCGACGCTTAAT 58.051 50.000 0.00 0.00 0.00 1.40
3617 11147 2.285977 GGATGGAACCGACGCTTAATT 58.714 47.619 0.00 0.00 0.00 1.40
3618 11148 3.460103 GGATGGAACCGACGCTTAATTA 58.540 45.455 0.00 0.00 0.00 1.40
3619 11149 3.493503 GGATGGAACCGACGCTTAATTAG 59.506 47.826 0.00 0.00 0.00 1.73
3620 11150 2.896168 TGGAACCGACGCTTAATTAGG 58.104 47.619 0.00 0.00 0.00 2.69
3621 11151 1.596260 GGAACCGACGCTTAATTAGGC 59.404 52.381 9.43 9.43 0.00 3.93
3630 11160 4.175787 CGCTTAATTAGGCGTATCTCCT 57.824 45.455 28.00 0.00 45.15 3.69
3631 11161 3.921021 CGCTTAATTAGGCGTATCTCCTG 59.079 47.826 28.00 2.95 45.15 3.86
3632 11162 4.558898 CGCTTAATTAGGCGTATCTCCTGT 60.559 45.833 28.00 0.00 45.15 4.00
3633 11163 5.335426 CGCTTAATTAGGCGTATCTCCTGTA 60.335 44.000 28.00 0.00 45.15 2.74
3634 11164 6.094061 GCTTAATTAGGCGTATCTCCTGTAG 58.906 44.000 3.59 0.00 35.21 2.74
3635 11165 6.072064 GCTTAATTAGGCGTATCTCCTGTAGA 60.072 42.308 3.59 0.00 39.02 2.59
3636 11166 7.523380 GCTTAATTAGGCGTATCTCCTGTAGAA 60.523 40.741 3.59 0.00 37.89 2.10
3637 11167 6.726490 AATTAGGCGTATCTCCTGTAGAAA 57.274 37.500 0.00 0.00 37.89 2.52
3638 11168 6.919775 ATTAGGCGTATCTCCTGTAGAAAT 57.080 37.500 0.00 0.00 37.89 2.17
3639 11169 8.418597 AATTAGGCGTATCTCCTGTAGAAATA 57.581 34.615 0.00 0.00 37.89 1.40
3640 11170 5.968528 AGGCGTATCTCCTGTAGAAATAG 57.031 43.478 0.00 0.00 37.89 1.73
3641 11171 4.767928 AGGCGTATCTCCTGTAGAAATAGG 59.232 45.833 0.00 0.00 37.89 2.57
3642 11172 4.487019 GCGTATCTCCTGTAGAAATAGGC 58.513 47.826 0.00 0.00 37.89 3.93
3643 11173 4.022242 GCGTATCTCCTGTAGAAATAGGCA 60.022 45.833 0.00 0.00 37.89 4.75
3644 11174 5.704888 CGTATCTCCTGTAGAAATAGGCAG 58.295 45.833 0.00 0.00 37.89 4.85
3645 11175 5.241949 CGTATCTCCTGTAGAAATAGGCAGT 59.758 44.000 0.00 0.00 37.89 4.40
3646 11176 6.430308 CGTATCTCCTGTAGAAATAGGCAGTA 59.570 42.308 0.00 0.00 37.89 2.74
3647 11177 7.040617 CGTATCTCCTGTAGAAATAGGCAGTAA 60.041 40.741 0.00 0.00 37.89 2.24
3648 11178 7.863901 ATCTCCTGTAGAAATAGGCAGTAAT 57.136 36.000 0.00 0.00 37.89 1.89
3649 11179 8.958060 ATCTCCTGTAGAAATAGGCAGTAATA 57.042 34.615 0.00 0.00 37.89 0.98
3650 11180 8.179509 TCTCCTGTAGAAATAGGCAGTAATAC 57.820 38.462 0.00 0.00 34.08 1.89
3651 11181 8.005388 TCTCCTGTAGAAATAGGCAGTAATACT 58.995 37.037 0.00 0.00 34.08 2.12
3652 11182 8.548880 TCCTGTAGAAATAGGCAGTAATACTT 57.451 34.615 0.00 0.00 34.08 2.24
3653 11183 8.639761 TCCTGTAGAAATAGGCAGTAATACTTC 58.360 37.037 0.00 0.00 34.08 3.01
3654 11184 8.421784 CCTGTAGAAATAGGCAGTAATACTTCA 58.578 37.037 0.00 0.00 0.00 3.02
3655 11185 9.469807 CTGTAGAAATAGGCAGTAATACTTCAG 57.530 37.037 0.00 0.00 0.00 3.02
3656 11186 9.197306 TGTAGAAATAGGCAGTAATACTTCAGA 57.803 33.333 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.755686 GGAGTTCGAGGATGATGCCT 59.244 55.000 0.00 0.00 42.17 4.75
6 7 0.465705 TGGAGTTCGAGGATGATGCC 59.534 55.000 0.00 0.00 0.00 4.40
7 8 2.208431 CTTGGAGTTCGAGGATGATGC 58.792 52.381 0.00 0.00 0.00 3.91
8 9 2.208431 GCTTGGAGTTCGAGGATGATG 58.792 52.381 0.00 0.00 0.00 3.07
9 10 1.139853 GGCTTGGAGTTCGAGGATGAT 59.860 52.381 0.00 0.00 0.00 2.45
10 11 0.537188 GGCTTGGAGTTCGAGGATGA 59.463 55.000 0.00 0.00 0.00 2.92
11 12 0.462759 GGGCTTGGAGTTCGAGGATG 60.463 60.000 0.00 0.00 0.00 3.51
12 13 0.909610 TGGGCTTGGAGTTCGAGGAT 60.910 55.000 0.00 0.00 0.00 3.24
13 14 0.909610 ATGGGCTTGGAGTTCGAGGA 60.910 55.000 0.00 0.00 0.00 3.71
14 15 0.745845 CATGGGCTTGGAGTTCGAGG 60.746 60.000 0.00 0.00 0.00 4.63
15 16 0.745845 CCATGGGCTTGGAGTTCGAG 60.746 60.000 2.85 0.00 39.25 4.04
16 17 1.299648 CCATGGGCTTGGAGTTCGA 59.700 57.895 2.85 0.00 39.25 3.71
17 18 2.409870 GCCATGGGCTTGGAGTTCG 61.410 63.158 15.13 0.00 46.69 3.95
18 19 3.608432 GCCATGGGCTTGGAGTTC 58.392 61.111 15.13 0.00 46.69 3.01
36 37 4.365111 TTCCTGGGCTGCGGCAAT 62.365 61.111 21.31 0.00 40.87 3.56
63 64 1.135402 GTAAAATCAGGGCAGGTTGCG 60.135 52.381 0.00 0.00 46.21 4.85
64 65 1.892474 TGTAAAATCAGGGCAGGTTGC 59.108 47.619 0.00 0.00 44.08 4.17
65 66 5.163519 CCTTATGTAAAATCAGGGCAGGTTG 60.164 44.000 0.00 0.00 0.00 3.77
66 67 4.956075 CCTTATGTAAAATCAGGGCAGGTT 59.044 41.667 0.00 0.00 0.00 3.50
67 68 4.536765 CCTTATGTAAAATCAGGGCAGGT 58.463 43.478 0.00 0.00 0.00 4.00
68 69 3.319122 GCCTTATGTAAAATCAGGGCAGG 59.681 47.826 0.00 0.00 38.35 4.85
69 70 3.003689 CGCCTTATGTAAAATCAGGGCAG 59.996 47.826 0.00 0.00 38.37 4.85
70 71 2.948979 CGCCTTATGTAAAATCAGGGCA 59.051 45.455 0.00 0.00 38.37 5.36
71 72 2.293399 CCGCCTTATGTAAAATCAGGGC 59.707 50.000 0.00 0.00 35.53 5.19
72 73 2.884639 CCCGCCTTATGTAAAATCAGGG 59.115 50.000 0.00 0.00 0.00 4.45
73 74 3.551846 ACCCGCCTTATGTAAAATCAGG 58.448 45.455 0.00 0.00 0.00 3.86
74 75 4.196193 TGACCCGCCTTATGTAAAATCAG 58.804 43.478 0.00 0.00 0.00 2.90
75 76 4.223556 TGACCCGCCTTATGTAAAATCA 57.776 40.909 0.00 0.00 0.00 2.57
76 77 5.570234 TTTGACCCGCCTTATGTAAAATC 57.430 39.130 0.00 0.00 0.00 2.17
77 78 5.986501 TTTTGACCCGCCTTATGTAAAAT 57.013 34.783 0.00 0.00 0.00 1.82
78 79 5.786264 TTTTTGACCCGCCTTATGTAAAA 57.214 34.783 0.00 0.00 0.00 1.52
97 98 1.185315 CCTCCACCATCGCCATTTTT 58.815 50.000 0.00 0.00 0.00 1.94
98 99 0.331278 TCCTCCACCATCGCCATTTT 59.669 50.000 0.00 0.00 0.00 1.82
99 100 0.107017 CTCCTCCACCATCGCCATTT 60.107 55.000 0.00 0.00 0.00 2.32
100 101 1.528824 CTCCTCCACCATCGCCATT 59.471 57.895 0.00 0.00 0.00 3.16
101 102 3.112205 GCTCCTCCACCATCGCCAT 62.112 63.158 0.00 0.00 0.00 4.40
102 103 2.871795 TAGCTCCTCCACCATCGCCA 62.872 60.000 0.00 0.00 0.00 5.69
103 104 2.134287 TAGCTCCTCCACCATCGCC 61.134 63.158 0.00 0.00 0.00 5.54
104 105 1.068250 GTAGCTCCTCCACCATCGC 59.932 63.158 0.00 0.00 0.00 4.58
105 106 0.387202 CAGTAGCTCCTCCACCATCG 59.613 60.000 0.00 0.00 0.00 3.84
106 107 1.137872 CACAGTAGCTCCTCCACCATC 59.862 57.143 0.00 0.00 0.00 3.51
107 108 1.198713 CACAGTAGCTCCTCCACCAT 58.801 55.000 0.00 0.00 0.00 3.55
108 109 0.904865 CCACAGTAGCTCCTCCACCA 60.905 60.000 0.00 0.00 0.00 4.17
109 110 1.617947 CCCACAGTAGCTCCTCCACC 61.618 65.000 0.00 0.00 0.00 4.61
110 111 1.617947 CCCCACAGTAGCTCCTCCAC 61.618 65.000 0.00 0.00 0.00 4.02
111 112 1.306141 CCCCACAGTAGCTCCTCCA 60.306 63.158 0.00 0.00 0.00 3.86
112 113 1.001760 TCCCCACAGTAGCTCCTCC 59.998 63.158 0.00 0.00 0.00 4.30
113 114 1.045911 CCTCCCCACAGTAGCTCCTC 61.046 65.000 0.00 0.00 0.00 3.71
114 115 1.002274 CCTCCCCACAGTAGCTCCT 59.998 63.158 0.00 0.00 0.00 3.69
115 116 1.001760 TCCTCCCCACAGTAGCTCC 59.998 63.158 0.00 0.00 0.00 4.70
116 117 1.681486 GCTCCTCCCCACAGTAGCTC 61.681 65.000 0.00 0.00 0.00 4.09
117 118 1.687493 GCTCCTCCCCACAGTAGCT 60.687 63.158 0.00 0.00 0.00 3.32
118 119 1.681486 GAGCTCCTCCCCACAGTAGC 61.681 65.000 0.87 0.00 0.00 3.58
119 120 1.388065 CGAGCTCCTCCCCACAGTAG 61.388 65.000 8.47 0.00 0.00 2.57
120 121 1.379977 CGAGCTCCTCCCCACAGTA 60.380 63.158 8.47 0.00 0.00 2.74
121 122 2.681778 CGAGCTCCTCCCCACAGT 60.682 66.667 8.47 0.00 0.00 3.55
122 123 2.681778 ACGAGCTCCTCCCCACAG 60.682 66.667 8.47 0.00 0.00 3.66
123 124 1.859841 TAGACGAGCTCCTCCCCACA 61.860 60.000 8.47 0.00 0.00 4.17
124 125 1.076923 TAGACGAGCTCCTCCCCAC 60.077 63.158 8.47 0.00 0.00 4.61
125 126 1.227664 CTAGACGAGCTCCTCCCCA 59.772 63.158 8.47 0.00 0.00 4.96
126 127 0.536460 CTCTAGACGAGCTCCTCCCC 60.536 65.000 8.47 0.00 31.99 4.81
127 128 0.536460 CCTCTAGACGAGCTCCTCCC 60.536 65.000 8.47 0.00 38.49 4.30
128 129 0.470766 TCCTCTAGACGAGCTCCTCC 59.529 60.000 8.47 0.00 38.49 4.30
129 130 1.589803 GTCCTCTAGACGAGCTCCTC 58.410 60.000 8.47 6.36 38.49 3.71
130 131 3.792712 GTCCTCTAGACGAGCTCCT 57.207 57.895 8.47 2.67 38.49 3.69
138 139 2.092321 TCTAGCCACCAGTCCTCTAGAC 60.092 54.545 0.00 0.00 46.71 2.59
139 140 2.173782 CTCTAGCCACCAGTCCTCTAGA 59.826 54.545 0.00 0.00 35.71 2.43
140 141 2.092103 ACTCTAGCCACCAGTCCTCTAG 60.092 54.545 0.00 0.00 0.00 2.43
141 142 1.923850 ACTCTAGCCACCAGTCCTCTA 59.076 52.381 0.00 0.00 0.00 2.43
142 143 0.707616 ACTCTAGCCACCAGTCCTCT 59.292 55.000 0.00 0.00 0.00 3.69
143 144 1.205893 CAACTCTAGCCACCAGTCCTC 59.794 57.143 0.00 0.00 0.00 3.71
144 145 1.270907 CAACTCTAGCCACCAGTCCT 58.729 55.000 0.00 0.00 0.00 3.85
145 146 0.250513 CCAACTCTAGCCACCAGTCC 59.749 60.000 0.00 0.00 0.00 3.85
146 147 0.391793 GCCAACTCTAGCCACCAGTC 60.392 60.000 0.00 0.00 0.00 3.51
147 148 0.838122 AGCCAACTCTAGCCACCAGT 60.838 55.000 0.00 0.00 0.00 4.00
148 149 0.107945 GAGCCAACTCTAGCCACCAG 60.108 60.000 0.00 0.00 40.03 4.00
149 150 1.553690 GGAGCCAACTCTAGCCACCA 61.554 60.000 0.00 0.00 42.98 4.17
150 151 1.222113 GGAGCCAACTCTAGCCACC 59.778 63.158 0.00 0.00 42.98 4.61
151 152 1.153549 CGGAGCCAACTCTAGCCAC 60.154 63.158 0.00 0.00 42.98 5.01
152 153 2.359169 CCGGAGCCAACTCTAGCCA 61.359 63.158 0.00 0.00 42.98 4.75
153 154 2.501610 CCGGAGCCAACTCTAGCC 59.498 66.667 0.00 0.00 42.98 3.93
154 155 2.202946 GCCGGAGCCAACTCTAGC 60.203 66.667 5.05 0.00 42.98 3.42
155 156 2.105128 CGCCGGAGCCAACTCTAG 59.895 66.667 5.05 0.00 42.98 2.43
156 157 2.361992 TCGCCGGAGCCAACTCTA 60.362 61.111 5.05 0.00 42.98 2.43
157 158 3.764466 CTCGCCGGAGCCAACTCT 61.764 66.667 5.05 0.00 42.98 3.24
158 159 3.296709 TTCTCGCCGGAGCCAACTC 62.297 63.158 5.05 0.00 40.26 3.01
159 160 3.302347 CTTCTCGCCGGAGCCAACT 62.302 63.158 5.05 0.00 40.26 3.16
160 161 2.815647 CTTCTCGCCGGAGCCAAC 60.816 66.667 5.05 0.00 40.26 3.77
161 162 4.082523 CCTTCTCGCCGGAGCCAA 62.083 66.667 5.05 0.00 40.26 4.52
163 164 4.821589 CACCTTCTCGCCGGAGCC 62.822 72.222 5.05 0.00 40.26 4.70
164 165 4.821589 CCACCTTCTCGCCGGAGC 62.822 72.222 5.05 0.00 40.26 4.70
165 166 4.821589 GCCACCTTCTCGCCGGAG 62.822 72.222 5.05 0.00 41.89 4.63
170 171 4.821589 CTCCGGCCACCTTCTCGC 62.822 72.222 2.24 0.00 0.00 5.03
171 172 4.148825 CCTCCGGCCACCTTCTCG 62.149 72.222 2.24 0.00 0.00 4.04
172 173 2.125766 AAACCTCCGGCCACCTTCTC 62.126 60.000 2.24 0.00 0.00 2.87
173 174 1.716028 AAAACCTCCGGCCACCTTCT 61.716 55.000 2.24 0.00 0.00 2.85
174 175 0.826256 AAAAACCTCCGGCCACCTTC 60.826 55.000 2.24 0.00 0.00 3.46
175 176 1.112916 CAAAAACCTCCGGCCACCTT 61.113 55.000 2.24 0.00 0.00 3.50
176 177 1.530655 CAAAAACCTCCGGCCACCT 60.531 57.895 2.24 0.00 0.00 4.00
177 178 2.570284 CCAAAAACCTCCGGCCACC 61.570 63.158 2.24 0.00 0.00 4.61
178 179 2.570284 CCCAAAAACCTCCGGCCAC 61.570 63.158 2.24 0.00 0.00 5.01
179 180 2.203567 CCCAAAAACCTCCGGCCA 60.204 61.111 2.24 0.00 0.00 5.36
180 181 2.203582 ACCCAAAAACCTCCGGCC 60.204 61.111 0.00 0.00 0.00 6.13
181 182 2.570284 CCACCCAAAAACCTCCGGC 61.570 63.158 0.00 0.00 0.00 6.13
182 183 2.570284 GCCACCCAAAAACCTCCGG 61.570 63.158 0.00 0.00 0.00 5.14
183 184 1.530655 AGCCACCCAAAAACCTCCG 60.531 57.895 0.00 0.00 0.00 4.63
184 185 1.471829 CCAGCCACCCAAAAACCTCC 61.472 60.000 0.00 0.00 0.00 4.30
185 186 0.759060 ACCAGCCACCCAAAAACCTC 60.759 55.000 0.00 0.00 0.00 3.85
186 187 1.048160 CACCAGCCACCCAAAAACCT 61.048 55.000 0.00 0.00 0.00 3.50
187 188 1.445518 CACCAGCCACCCAAAAACC 59.554 57.895 0.00 0.00 0.00 3.27
188 189 1.334384 ACCACCAGCCACCCAAAAAC 61.334 55.000 0.00 0.00 0.00 2.43
189 190 0.618968 AACCACCAGCCACCCAAAAA 60.619 50.000 0.00 0.00 0.00 1.94
190 191 1.002274 AACCACCAGCCACCCAAAA 59.998 52.632 0.00 0.00 0.00 2.44
191 192 1.760086 CAACCACCAGCCACCCAAA 60.760 57.895 0.00 0.00 0.00 3.28
192 193 2.123511 CAACCACCAGCCACCCAA 60.124 61.111 0.00 0.00 0.00 4.12
193 194 4.217210 CCAACCACCAGCCACCCA 62.217 66.667 0.00 0.00 0.00 4.51
203 204 4.410400 CGGAGGAGGGCCAACCAC 62.410 72.222 19.17 13.72 43.89 4.16
217 218 2.041922 CCCCTCCATCTCACCGGA 60.042 66.667 9.46 0.00 0.00 5.14
218 219 3.164269 CCCCCTCCATCTCACCGG 61.164 72.222 0.00 0.00 0.00 5.28
256 257 3.934962 GAGGATGGCTCCCGCTCC 61.935 72.222 0.16 0.00 43.21 4.70
257 258 4.292178 CGAGGATGGCTCCCGCTC 62.292 72.222 0.16 0.00 43.21 5.03
259 260 4.593864 GACGAGGATGGCTCCCGC 62.594 72.222 0.00 2.92 43.21 6.13
260 261 3.917760 GGACGAGGATGGCTCCCG 61.918 72.222 0.00 10.09 43.21 5.14
261 262 3.917760 CGGACGAGGATGGCTCCC 61.918 72.222 0.00 0.00 43.21 4.30
262 263 1.179814 ATACGGACGAGGATGGCTCC 61.180 60.000 0.00 0.00 42.43 4.70
263 264 0.039074 CATACGGACGAGGATGGCTC 60.039 60.000 0.00 0.00 0.00 4.70
264 265 1.464376 CCATACGGACGAGGATGGCT 61.464 60.000 8.20 0.00 32.90 4.75
265 266 1.006102 CCATACGGACGAGGATGGC 60.006 63.158 8.20 0.00 32.90 4.40
266 267 1.257743 ATCCATACGGACGAGGATGG 58.742 55.000 12.96 12.96 46.79 3.51
267 268 2.354109 CATCCATACGGACGAGGATG 57.646 55.000 21.01 21.01 46.79 3.51
268 269 1.203013 TCCATCCATACGGACGAGGAT 60.203 52.381 0.00 5.60 46.79 3.24
269 270 0.184211 TCCATCCATACGGACGAGGA 59.816 55.000 0.00 3.37 46.79 3.71
270 271 1.037493 TTCCATCCATACGGACGAGG 58.963 55.000 0.00 0.00 46.79 4.63
271 272 2.882927 TTTCCATCCATACGGACGAG 57.117 50.000 0.00 0.00 46.79 4.18
272 273 4.380128 CGATATTTCCATCCATACGGACGA 60.380 45.833 0.00 0.00 46.79 4.20
273 274 3.857665 CGATATTTCCATCCATACGGACG 59.142 47.826 0.00 0.00 46.79 4.79
274 275 4.181578 CCGATATTTCCATCCATACGGAC 58.818 47.826 0.00 0.00 46.79 4.79
276 277 3.055385 ACCCGATATTTCCATCCATACGG 60.055 47.826 0.00 0.00 37.98 4.02
277 278 4.202245 ACCCGATATTTCCATCCATACG 57.798 45.455 0.00 0.00 0.00 3.06
278 279 5.183140 CCAAACCCGATATTTCCATCCATAC 59.817 44.000 0.00 0.00 0.00 2.39
279 280 5.321102 CCAAACCCGATATTTCCATCCATA 58.679 41.667 0.00 0.00 0.00 2.74
280 281 4.151883 CCAAACCCGATATTTCCATCCAT 58.848 43.478 0.00 0.00 0.00 3.41
281 282 3.561143 CCAAACCCGATATTTCCATCCA 58.439 45.455 0.00 0.00 0.00 3.41
282 283 2.890945 CCCAAACCCGATATTTCCATCC 59.109 50.000 0.00 0.00 0.00 3.51
283 284 3.827722 TCCCAAACCCGATATTTCCATC 58.172 45.455 0.00 0.00 0.00 3.51
284 285 3.963476 TCCCAAACCCGATATTTCCAT 57.037 42.857 0.00 0.00 0.00 3.41
285 286 3.963476 ATCCCAAACCCGATATTTCCA 57.037 42.857 0.00 0.00 0.00 3.53
286 287 4.765339 CCTTATCCCAAACCCGATATTTCC 59.235 45.833 0.00 0.00 0.00 3.13
287 288 5.382616 ACCTTATCCCAAACCCGATATTTC 58.617 41.667 0.00 0.00 0.00 2.17
288 289 5.397553 ACCTTATCCCAAACCCGATATTT 57.602 39.130 0.00 0.00 0.00 1.40
289 290 5.397553 AACCTTATCCCAAACCCGATATT 57.602 39.130 0.00 0.00 0.00 1.28
290 291 5.511888 CGTAACCTTATCCCAAACCCGATAT 60.512 44.000 0.00 0.00 0.00 1.63
291 292 4.202243 CGTAACCTTATCCCAAACCCGATA 60.202 45.833 0.00 0.00 0.00 2.92
292 293 3.432608 CGTAACCTTATCCCAAACCCGAT 60.433 47.826 0.00 0.00 0.00 4.18
293 294 2.093553 CGTAACCTTATCCCAAACCCGA 60.094 50.000 0.00 0.00 0.00 5.14
294 295 2.282407 CGTAACCTTATCCCAAACCCG 58.718 52.381 0.00 0.00 0.00 5.28
295 296 3.354948 ACGTAACCTTATCCCAAACCC 57.645 47.619 0.00 0.00 0.00 4.11
315 316 5.123820 GTCACTACAATATCAAAGCAGGCAA 59.876 40.000 0.00 0.00 0.00 4.52
318 319 5.643348 TGTGTCACTACAATATCAAAGCAGG 59.357 40.000 4.27 0.00 37.36 4.85
328 329 4.173256 CGTGAGCATGTGTCACTACAATA 58.827 43.478 21.05 0.00 41.91 1.90
352 354 2.011741 AACGTGAGACCACAGCGACA 62.012 55.000 0.00 0.00 43.34 4.35
359 361 1.941812 CAGCCAAACGTGAGACCAC 59.058 57.895 0.00 0.00 39.86 4.16
407 409 7.170658 CAGTTTCCAAAACAACAACTTTCAGAA 59.829 33.333 5.46 0.00 0.00 3.02
408 410 6.644592 CAGTTTCCAAAACAACAACTTTCAGA 59.355 34.615 5.46 0.00 0.00 3.27
409 411 6.644592 TCAGTTTCCAAAACAACAACTTTCAG 59.355 34.615 5.46 0.00 0.00 3.02
410 412 6.516718 TCAGTTTCCAAAACAACAACTTTCA 58.483 32.000 5.46 0.00 0.00 2.69
412 414 6.074034 CGTTCAGTTTCCAAAACAACAACTTT 60.074 34.615 5.46 0.00 0.00 2.66
413 415 5.404066 CGTTCAGTTTCCAAAACAACAACTT 59.596 36.000 5.46 0.00 0.00 2.66
455 457 8.764524 ATTCTCTTTACATTCACACTGTCTAC 57.235 34.615 0.00 0.00 0.00 2.59
457 459 7.308229 GCAATTCTCTTTACATTCACACTGTCT 60.308 37.037 0.00 0.00 0.00 3.41
460 462 6.906659 AGCAATTCTCTTTACATTCACACTG 58.093 36.000 0.00 0.00 0.00 3.66
462 464 9.677567 TTTTAGCAATTCTCTTTACATTCACAC 57.322 29.630 0.00 0.00 0.00 3.82
486 488 6.758806 TCTTAAGAAGTTGACCCCTACTTT 57.241 37.500 1.68 0.00 38.21 2.66
491 493 5.584551 ACATTCTTAAGAAGTTGACCCCT 57.415 39.130 21.75 0.60 37.48 4.79
598 607 1.214305 AGGGGCTGCCATGACCTTTA 61.214 55.000 22.05 0.00 34.90 1.85
608 617 2.150014 TAACAAAGGGAGGGGCTGCC 62.150 60.000 11.05 11.05 42.52 4.85
610 619 0.323451 GGTAACAAAGGGAGGGGCTG 60.323 60.000 0.00 0.00 0.00 4.85
611 620 0.477795 AGGTAACAAAGGGAGGGGCT 60.478 55.000 0.00 0.00 41.41 5.19
612 621 0.408309 AAGGTAACAAAGGGAGGGGC 59.592 55.000 0.00 0.00 41.41 5.80
613 622 1.272480 CCAAGGTAACAAAGGGAGGGG 60.272 57.143 0.00 0.00 41.41 4.79
617 633 1.215673 TGCACCAAGGTAACAAAGGGA 59.784 47.619 0.00 0.00 41.41 4.20
713 729 5.333263 GGAAAATTCTTTCACGGTGCATTTG 60.333 40.000 2.51 0.00 42.44 2.32
716 732 3.573967 AGGAAAATTCTTTCACGGTGCAT 59.426 39.130 2.51 0.00 42.44 3.96
717 733 2.955660 AGGAAAATTCTTTCACGGTGCA 59.044 40.909 2.51 0.00 42.44 4.57
718 734 3.004315 TGAGGAAAATTCTTTCACGGTGC 59.996 43.478 2.51 0.00 42.44 5.01
719 735 4.036262 TGTGAGGAAAATTCTTTCACGGTG 59.964 41.667 17.80 0.56 42.44 4.94
721 737 4.829064 TGTGAGGAAAATTCTTTCACGG 57.171 40.909 17.80 0.00 42.44 4.94
722 738 5.156355 CCATGTGAGGAAAATTCTTTCACG 58.844 41.667 17.80 10.19 42.44 4.35
723 739 6.089249 ACCATGTGAGGAAAATTCTTTCAC 57.911 37.500 16.95 16.95 42.44 3.18
724 740 6.729690 AACCATGTGAGGAAAATTCTTTCA 57.270 33.333 0.00 0.00 42.44 2.69
725 741 8.141268 TGTTAACCATGTGAGGAAAATTCTTTC 58.859 33.333 2.48 0.00 40.31 2.62
726 742 8.017418 TGTTAACCATGTGAGGAAAATTCTTT 57.983 30.769 2.48 0.00 0.00 2.52
727 743 7.595819 TGTTAACCATGTGAGGAAAATTCTT 57.404 32.000 2.48 0.00 0.00 2.52
728 744 7.781324 ATGTTAACCATGTGAGGAAAATTCT 57.219 32.000 2.48 0.00 30.69 2.40
729 745 7.872483 ACAATGTTAACCATGTGAGGAAAATTC 59.128 33.333 11.33 0.00 32.82 2.17
730 746 7.734942 ACAATGTTAACCATGTGAGGAAAATT 58.265 30.769 11.33 0.00 32.82 1.82
731 747 7.301868 ACAATGTTAACCATGTGAGGAAAAT 57.698 32.000 11.33 0.00 32.82 1.82
732 748 6.723298 ACAATGTTAACCATGTGAGGAAAA 57.277 33.333 11.33 0.00 32.82 2.29
733 749 7.450014 ACATACAATGTTAACCATGTGAGGAAA 59.550 33.333 18.49 3.53 41.63 3.13
734 750 6.945435 ACATACAATGTTAACCATGTGAGGAA 59.055 34.615 18.49 4.08 41.63 3.36
735 751 6.480763 ACATACAATGTTAACCATGTGAGGA 58.519 36.000 18.49 4.37 41.63 3.71
736 752 6.757897 ACATACAATGTTAACCATGTGAGG 57.242 37.500 18.49 12.02 41.63 3.86
753 769 9.750125 GTAGTCATCTGATTGTATCAACATACA 57.250 33.333 0.00 0.00 42.72 2.29
761 777 6.040955 TCAGGGTGTAGTCATCTGATTGTATC 59.959 42.308 0.00 0.00 34.47 2.24
799 815 8.946085 TCAAATTGACAGTATACATCCAAGTTC 58.054 33.333 5.50 0.00 0.00 3.01
805 821 7.567571 CGTGATCAAATTGACAGTATACATCC 58.432 38.462 5.50 0.00 0.00 3.51
810 826 6.976636 TTGCGTGATCAAATTGACAGTATA 57.023 33.333 0.00 0.00 0.00 1.47
811 827 5.878332 TTGCGTGATCAAATTGACAGTAT 57.122 34.783 0.00 0.00 0.00 2.12
813 829 4.566545 TTTGCGTGATCAAATTGACAGT 57.433 36.364 0.00 0.00 31.64 3.55
815 831 5.180367 TCTTTTGCGTGATCAAATTGACA 57.820 34.783 0.00 0.00 36.04 3.58
816 832 6.695292 ATTCTTTTGCGTGATCAAATTGAC 57.305 33.333 0.00 0.00 36.04 3.18
819 835 8.514594 TCTCTTATTCTTTTGCGTGATCAAATT 58.485 29.630 0.00 0.00 36.04 1.82
820 836 8.044060 TCTCTTATTCTTTTGCGTGATCAAAT 57.956 30.769 0.00 0.00 36.04 2.32
821 837 7.433708 TCTCTTATTCTTTTGCGTGATCAAA 57.566 32.000 0.00 0.00 34.47 2.69
822 838 7.615582 ATCTCTTATTCTTTTGCGTGATCAA 57.384 32.000 0.00 0.00 0.00 2.57
823 839 7.615582 AATCTCTTATTCTTTTGCGTGATCA 57.384 32.000 0.00 0.00 0.00 2.92
826 842 9.817809 AGTATAATCTCTTATTCTTTTGCGTGA 57.182 29.630 0.00 0.00 0.00 4.35
914 933 3.665675 CTCGACCCTTTCCTGCCCG 62.666 68.421 0.00 0.00 0.00 6.13
917 936 0.179070 GATCCTCGACCCTTTCCTGC 60.179 60.000 0.00 0.00 0.00 4.85
986 1041 3.256136 AGAGACGAGAACCTGTAAACCTG 59.744 47.826 0.00 0.00 0.00 4.00
1000 1055 1.135731 GGTCACGCAGAGAGACGAG 59.864 63.158 0.00 0.00 33.18 4.18
1001 1056 1.599797 TGGTCACGCAGAGAGACGA 60.600 57.895 0.00 0.00 33.18 4.20
1002 1057 1.442857 GTGGTCACGCAGAGAGACG 60.443 63.158 0.00 0.00 33.18 4.18
1003 1058 0.387878 CAGTGGTCACGCAGAGAGAC 60.388 60.000 0.00 0.00 36.20 3.36
1004 1059 1.959848 CAGTGGTCACGCAGAGAGA 59.040 57.895 0.00 0.00 36.20 3.10
1005 1060 1.735920 GCAGTGGTCACGCAGAGAG 60.736 63.158 11.04 0.00 36.20 3.20
1006 1061 2.340078 GCAGTGGTCACGCAGAGA 59.660 61.111 11.04 0.00 36.20 3.10
1007 1062 2.740055 GGCAGTGGTCACGCAGAG 60.740 66.667 15.43 0.63 36.20 3.35
1008 1063 3.545574 TGGCAGTGGTCACGCAGA 61.546 61.111 15.43 3.90 36.20 4.26
1009 1064 3.349006 GTGGCAGTGGTCACGCAG 61.349 66.667 15.43 4.41 40.26 5.18
1013 1068 1.079127 ATAGCGTGGCAGTGGTCAC 60.079 57.895 0.00 0.00 46.16 3.67
1014 1069 1.218047 GATAGCGTGGCAGTGGTCA 59.782 57.895 0.00 0.00 0.00 4.02
1015 1070 0.391130 TTGATAGCGTGGCAGTGGTC 60.391 55.000 0.00 0.00 0.00 4.02
1016 1071 0.253044 ATTGATAGCGTGGCAGTGGT 59.747 50.000 0.00 0.00 0.00 4.16
1017 1072 1.382522 AATTGATAGCGTGGCAGTGG 58.617 50.000 0.00 0.00 0.00 4.00
1018 1073 3.457234 TCTAATTGATAGCGTGGCAGTG 58.543 45.455 0.00 0.00 0.00 3.66
1019 1074 3.722147 CTCTAATTGATAGCGTGGCAGT 58.278 45.455 0.00 0.00 0.00 4.40
1020 1075 2.478134 GCTCTAATTGATAGCGTGGCAG 59.522 50.000 0.00 0.00 0.00 4.85
1021 1076 2.483876 GCTCTAATTGATAGCGTGGCA 58.516 47.619 0.00 0.00 0.00 4.92
1059 1114 2.264109 AGTTCTGTACATGCTCGTCG 57.736 50.000 0.00 0.00 0.00 5.12
1148 1231 1.011968 CGCGTTGATCAGGACGGAAA 61.012 55.000 18.77 0.00 39.52 3.13
1151 1234 1.683790 GAACGCGTTGATCAGGACGG 61.684 60.000 31.89 12.31 39.52 4.79
1191 1324 1.884075 CGACTGGTTGGGGATCGTGA 61.884 60.000 0.00 0.00 0.00 4.35
1405 2358 3.684788 ACGTAATCTGCAGGTTCATGTTC 59.315 43.478 17.29 0.72 0.00 3.18
1492 3700 0.454600 GGTCGCAATCGAGGTGTAGA 59.545 55.000 0.00 0.00 46.46 2.59
1528 3738 1.819288 CTGCTCCTCCGAGTTTGTCTA 59.181 52.381 0.00 0.00 38.49 2.59
1529 3739 0.605589 CTGCTCCTCCGAGTTTGTCT 59.394 55.000 0.00 0.00 38.49 3.41
1532 3742 1.480137 AGATCTGCTCCTCCGAGTTTG 59.520 52.381 0.00 0.00 38.49 2.93
1533 3743 1.859302 AGATCTGCTCCTCCGAGTTT 58.141 50.000 0.00 0.00 38.49 2.66
1579 3824 2.667470 CCTGTAGCTTACCTGCTCCTA 58.333 52.381 0.00 0.00 42.97 2.94
1608 3853 1.139058 ACAGACCGCAACTTCTTGTCT 59.861 47.619 0.00 0.00 36.77 3.41
1644 3892 3.078097 GTCATCTAGCGCCAGATAGAGA 58.922 50.000 18.04 8.94 46.87 3.10
1680 7325 7.115095 GTGTCGATGTTAATCTTGTAGATAGCC 59.885 40.741 0.00 0.00 32.89 3.93
1696 7341 1.878102 GCTGTCCAAGGTGTCGATGTT 60.878 52.381 0.00 0.00 0.00 2.71
1743 7394 1.178276 CTGACACTAGCCGGAGAACT 58.822 55.000 5.05 0.00 0.00 3.01
1771 7423 3.403038 GCAGCGAAGTACATGGGATAAT 58.597 45.455 0.00 0.00 0.00 1.28
1819 7471 2.127232 GTGCCAGGGTGTTTGCTGT 61.127 57.895 0.00 0.00 0.00 4.40
1952 7607 7.120579 TGTCGCATTTCCTTGATGTTATACTTT 59.879 33.333 0.00 0.00 0.00 2.66
2038 7702 1.451504 CTTGTCCAGCACCAGTCCA 59.548 57.895 0.00 0.00 0.00 4.02
2106 7770 3.807839 TCCATCCGGGTGCATGGG 61.808 66.667 9.99 0.00 40.21 4.00
2328 7995 2.084546 GTCAGGTTGCATGGTACCTTC 58.915 52.381 14.36 2.61 42.01 3.46
2741 10265 1.209640 GCAGAAACAGCAGCTCAGC 59.790 57.895 0.00 0.00 0.00 4.26
2766 10290 5.279910 GCAGGCATCTATCTAGTTCCAGAAT 60.280 44.000 0.00 0.00 0.00 2.40
2776 10300 8.428852 TGTAATTAAACTGCAGGCATCTATCTA 58.571 33.333 19.93 0.00 0.00 1.98
2807 10331 3.678289 TGCAGTGCAAGATCATGTACTT 58.322 40.909 17.26 2.84 42.57 2.24
2857 10381 7.224557 GCAAATTTAGTGGTTTGTTTGAGTCAT 59.775 33.333 0.00 0.00 37.57 3.06
2869 10393 3.801594 CGTGCAAAGCAAATTTAGTGGTT 59.198 39.130 0.00 0.00 41.47 3.67
2897 10421 5.390040 GGGTTTTATGCAAATAAACAACGGC 60.390 40.000 17.76 5.68 34.32 5.68
2898 10422 5.120986 GGGGTTTTATGCAAATAAACAACGG 59.879 40.000 17.76 0.00 34.32 4.44
2930 10454 1.235281 GGCGGGTTCAGTTCTTCCAC 61.235 60.000 0.00 0.00 0.00 4.02
2983 10507 5.761234 TCCGTTATTATGCACAGGGTAATTC 59.239 40.000 0.00 0.00 0.00 2.17
3005 10535 1.065126 AGAGGTTAGCTGTGGCAATCC 60.065 52.381 0.00 0.00 41.70 3.01
3012 10542 0.107945 GGCCTGAGAGGTTAGCTGTG 60.108 60.000 0.00 0.00 37.80 3.66
3042 10572 3.081061 TGTACAAGGCCTAAGCACATTG 58.919 45.455 5.16 0.00 42.56 2.82
3045 10575 2.940994 TTGTACAAGGCCTAAGCACA 57.059 45.000 5.16 6.37 42.56 4.57
3059 10589 4.874396 GTCCCTAAGCACCTAACATTGTAC 59.126 45.833 0.00 0.00 0.00 2.90
3078 10608 4.160594 CGGTTTATTTTTAAGCACGTCCC 58.839 43.478 0.00 0.00 0.00 4.46
3079 10609 4.160594 CCGGTTTATTTTTAAGCACGTCC 58.839 43.478 0.00 0.00 0.00 4.79
3080 10610 4.160594 CCCGGTTTATTTTTAAGCACGTC 58.839 43.478 0.00 0.00 0.00 4.34
3081 10611 3.569277 ACCCGGTTTATTTTTAAGCACGT 59.431 39.130 0.00 0.00 0.00 4.49
3082 10612 4.163458 ACCCGGTTTATTTTTAAGCACG 57.837 40.909 0.00 0.00 0.00 5.34
3083 10613 6.702723 AGAAAACCCGGTTTATTTTTAAGCAC 59.297 34.615 16.03 0.00 34.43 4.40
3084 10614 6.818233 AGAAAACCCGGTTTATTTTTAAGCA 58.182 32.000 16.03 0.00 34.43 3.91
3085 10615 8.815141 TTAGAAAACCCGGTTTATTTTTAAGC 57.185 30.769 16.03 0.00 34.43 3.09
3087 10617 9.258826 GCTTTAGAAAACCCGGTTTATTTTTAA 57.741 29.630 16.03 4.40 34.43 1.52
3088 10618 8.419442 TGCTTTAGAAAACCCGGTTTATTTTTA 58.581 29.630 16.03 0.00 34.43 1.52
3152 10682 6.982141 TGGTGCTTACTTGTATAGGATAAACG 59.018 38.462 0.00 0.00 0.00 3.60
3210 10740 1.072331 CAAGGTGCTTAGGTGAGGTGT 59.928 52.381 0.00 0.00 0.00 4.16
3231 10761 6.330004 GGAAACCCTTTTTCGGTACAAATA 57.670 37.500 0.00 0.00 31.69 1.40
3254 10784 7.958088 TCTTTTTCTTTAATACAAAGTGGGGG 58.042 34.615 0.00 0.00 0.00 5.40
3255 10785 9.476202 CTTCTTTTTCTTTAATACAAAGTGGGG 57.524 33.333 0.00 0.00 0.00 4.96
3269 10799 8.668353 GGCATTTGTTTCTTCTTCTTTTTCTTT 58.332 29.630 0.00 0.00 0.00 2.52
3270 10800 7.823799 TGGCATTTGTTTCTTCTTCTTTTTCTT 59.176 29.630 0.00 0.00 0.00 2.52
3271 10801 7.330262 TGGCATTTGTTTCTTCTTCTTTTTCT 58.670 30.769 0.00 0.00 0.00 2.52
3272 10802 7.538303 TGGCATTTGTTTCTTCTTCTTTTTC 57.462 32.000 0.00 0.00 0.00 2.29
3273 10803 7.148255 GGTTGGCATTTGTTTCTTCTTCTTTTT 60.148 33.333 0.00 0.00 0.00 1.94
3274 10804 6.316140 GGTTGGCATTTGTTTCTTCTTCTTTT 59.684 34.615 0.00 0.00 0.00 2.27
3275 10805 5.817296 GGTTGGCATTTGTTTCTTCTTCTTT 59.183 36.000 0.00 0.00 0.00 2.52
3276 10806 5.104982 TGGTTGGCATTTGTTTCTTCTTCTT 60.105 36.000 0.00 0.00 0.00 2.52
3277 10807 4.405358 TGGTTGGCATTTGTTTCTTCTTCT 59.595 37.500 0.00 0.00 0.00 2.85
3278 10808 4.507756 GTGGTTGGCATTTGTTTCTTCTTC 59.492 41.667 0.00 0.00 0.00 2.87
3279 10809 4.081198 TGTGGTTGGCATTTGTTTCTTCTT 60.081 37.500 0.00 0.00 0.00 2.52
3280 10810 3.450457 TGTGGTTGGCATTTGTTTCTTCT 59.550 39.130 0.00 0.00 0.00 2.85
3281 10811 3.791245 TGTGGTTGGCATTTGTTTCTTC 58.209 40.909 0.00 0.00 0.00 2.87
3282 10812 3.795877 CTGTGGTTGGCATTTGTTTCTT 58.204 40.909 0.00 0.00 0.00 2.52
3283 10813 2.483538 GCTGTGGTTGGCATTTGTTTCT 60.484 45.455 0.00 0.00 0.00 2.52
3284 10814 1.866601 GCTGTGGTTGGCATTTGTTTC 59.133 47.619 0.00 0.00 0.00 2.78
3285 10815 1.209019 TGCTGTGGTTGGCATTTGTTT 59.791 42.857 0.00 0.00 33.23 2.83
3286 10816 0.829333 TGCTGTGGTTGGCATTTGTT 59.171 45.000 0.00 0.00 33.23 2.83
3287 10817 0.390124 CTGCTGTGGTTGGCATTTGT 59.610 50.000 0.00 0.00 37.83 2.83
3288 10818 0.947180 GCTGCTGTGGTTGGCATTTG 60.947 55.000 0.00 0.00 37.83 2.32
3289 10819 1.117142 AGCTGCTGTGGTTGGCATTT 61.117 50.000 0.00 0.00 37.83 2.32
3290 10820 1.530013 GAGCTGCTGTGGTTGGCATT 61.530 55.000 7.01 0.00 37.83 3.56
3291 10821 1.975407 GAGCTGCTGTGGTTGGCAT 60.975 57.895 7.01 0.00 37.83 4.40
3292 10822 2.595463 GAGCTGCTGTGGTTGGCA 60.595 61.111 7.01 0.00 36.94 4.92
3293 10823 3.730761 CGAGCTGCTGTGGTTGGC 61.731 66.667 7.01 0.00 0.00 4.52
3294 10824 3.052082 CCGAGCTGCTGTGGTTGG 61.052 66.667 7.01 0.00 33.32 3.77
3295 10825 3.730761 GCCGAGCTGCTGTGGTTG 61.731 66.667 7.01 0.00 0.00 3.77
3296 10826 3.772853 TTGCCGAGCTGCTGTGGTT 62.773 57.895 7.01 0.00 0.00 3.67
3297 10827 3.772853 TTTGCCGAGCTGCTGTGGT 62.773 57.895 7.01 0.00 0.00 4.16
3298 10828 2.974489 CTTTGCCGAGCTGCTGTGG 61.974 63.158 7.01 10.21 0.00 4.17
3299 10829 2.559840 CTTTGCCGAGCTGCTGTG 59.440 61.111 7.01 0.00 0.00 3.66
3300 10830 3.360340 GCTTTGCCGAGCTGCTGT 61.360 61.111 7.01 0.00 39.57 4.40
3301 10831 4.456253 CGCTTTGCCGAGCTGCTG 62.456 66.667 7.01 0.00 40.52 4.41
3307 10837 4.228097 CATCCGCGCTTTGCCGAG 62.228 66.667 5.56 0.00 42.08 4.63
3308 10838 4.751093 TCATCCGCGCTTTGCCGA 62.751 61.111 5.56 0.00 42.08 5.54
3309 10839 4.520846 GTCATCCGCGCTTTGCCG 62.521 66.667 5.56 0.00 42.08 5.69
3310 10840 4.179579 GGTCATCCGCGCTTTGCC 62.180 66.667 5.56 2.72 42.08 4.52
3311 10841 4.179579 GGGTCATCCGCGCTTTGC 62.180 66.667 5.56 0.00 41.47 3.68
3337 10867 3.980442 TTTGTATCCGGTGGGCGCC 62.980 63.158 21.18 21.18 0.00 6.53
3338 10868 2.437002 TTTGTATCCGGTGGGCGC 60.437 61.111 0.00 0.00 0.00 6.53
3339 10869 2.110352 GGTTTGTATCCGGTGGGCG 61.110 63.158 0.00 0.00 0.00 6.13
3340 10870 1.001887 TGGTTTGTATCCGGTGGGC 60.002 57.895 0.00 0.00 0.00 5.36
3341 10871 0.678684 GGTGGTTTGTATCCGGTGGG 60.679 60.000 0.00 0.00 0.00 4.61
3342 10872 0.037017 TGGTGGTTTGTATCCGGTGG 59.963 55.000 0.00 0.00 0.00 4.61
3343 10873 1.161843 GTGGTGGTTTGTATCCGGTG 58.838 55.000 0.00 0.00 0.00 4.94
3344 10874 0.766131 TGTGGTGGTTTGTATCCGGT 59.234 50.000 0.00 0.00 0.00 5.28
3345 10875 1.002659 TCTGTGGTGGTTTGTATCCGG 59.997 52.381 0.00 0.00 0.00 5.14
3346 10876 2.073816 GTCTGTGGTGGTTTGTATCCG 58.926 52.381 0.00 0.00 0.00 4.18
3347 10877 2.433436 GGTCTGTGGTGGTTTGTATCC 58.567 52.381 0.00 0.00 0.00 2.59
3348 10878 2.073816 CGGTCTGTGGTGGTTTGTATC 58.926 52.381 0.00 0.00 0.00 2.24
3349 10879 1.695242 TCGGTCTGTGGTGGTTTGTAT 59.305 47.619 0.00 0.00 0.00 2.29
3350 10880 1.069513 CTCGGTCTGTGGTGGTTTGTA 59.930 52.381 0.00 0.00 0.00 2.41
3351 10881 0.179056 CTCGGTCTGTGGTGGTTTGT 60.179 55.000 0.00 0.00 0.00 2.83
3352 10882 0.884704 CCTCGGTCTGTGGTGGTTTG 60.885 60.000 0.00 0.00 0.00 2.93
3353 10883 1.342672 ACCTCGGTCTGTGGTGGTTT 61.343 55.000 4.56 0.00 42.75 3.27
3354 10884 1.342672 AACCTCGGTCTGTGGTGGTT 61.343 55.000 6.17 0.00 43.56 3.67
3355 10885 1.755393 GAACCTCGGTCTGTGGTGGT 61.755 60.000 6.17 0.00 43.56 4.16
3356 10886 1.004918 GAACCTCGGTCTGTGGTGG 60.005 63.158 6.17 0.00 43.56 4.61
3357 10887 1.004918 GGAACCTCGGTCTGTGGTG 60.005 63.158 6.17 0.00 43.56 4.17
3358 10888 2.571216 CGGAACCTCGGTCTGTGGT 61.571 63.158 0.00 0.00 46.25 4.16
3359 10889 1.812686 TTCGGAACCTCGGTCTGTGG 61.813 60.000 0.00 0.00 37.26 4.17
3360 10890 0.666577 GTTCGGAACCTCGGTCTGTG 60.667 60.000 9.75 0.00 0.00 3.66
3361 10891 1.664306 GTTCGGAACCTCGGTCTGT 59.336 57.895 9.75 0.00 0.00 3.41
3362 10892 4.573162 GTTCGGAACCTCGGTCTG 57.427 61.111 9.75 0.00 0.00 3.51
3376 10906 3.484547 CTTGGTACGCGGCGGTTC 61.485 66.667 27.37 15.19 0.00 3.62
3382 10912 3.788766 GTGCTGCTTGGTACGCGG 61.789 66.667 12.47 0.00 36.84 6.46
3383 10913 3.788766 GGTGCTGCTTGGTACGCG 61.789 66.667 3.53 3.53 0.00 6.01
3384 10914 2.358737 AGGTGCTGCTTGGTACGC 60.359 61.111 0.00 0.00 0.00 4.42
3385 10915 1.741770 GGAGGTGCTGCTTGGTACG 60.742 63.158 0.00 0.00 0.00 3.67
3386 10916 0.250727 TTGGAGGTGCTGCTTGGTAC 60.251 55.000 0.00 0.00 0.00 3.34
3387 10917 0.036732 CTTGGAGGTGCTGCTTGGTA 59.963 55.000 0.00 0.00 0.00 3.25
3388 10918 1.228367 CTTGGAGGTGCTGCTTGGT 60.228 57.895 0.00 0.00 0.00 3.67
3389 10919 0.538057 TTCTTGGAGGTGCTGCTTGG 60.538 55.000 0.00 0.00 0.00 3.61
3390 10920 0.879765 CTTCTTGGAGGTGCTGCTTG 59.120 55.000 0.00 0.00 0.00 4.01
3391 10921 0.251077 CCTTCTTGGAGGTGCTGCTT 60.251 55.000 0.00 0.00 38.35 3.91
3392 10922 1.130054 TCCTTCTTGGAGGTGCTGCT 61.130 55.000 0.00 0.00 40.56 4.24
3393 10923 1.376466 TCCTTCTTGGAGGTGCTGC 59.624 57.895 0.00 0.00 40.56 5.25
3401 10931 1.610624 GGTGTCGCATTCCTTCTTGGA 60.611 52.381 0.00 0.00 44.51 3.53
3402 10932 0.804989 GGTGTCGCATTCCTTCTTGG 59.195 55.000 0.00 0.00 37.10 3.61
3403 10933 0.443869 CGGTGTCGCATTCCTTCTTG 59.556 55.000 0.00 0.00 0.00 3.02
3404 10934 0.320374 TCGGTGTCGCATTCCTTCTT 59.680 50.000 0.00 0.00 36.13 2.52
3405 10935 0.389948 GTCGGTGTCGCATTCCTTCT 60.390 55.000 0.00 0.00 36.13 2.85
3406 10936 1.683790 CGTCGGTGTCGCATTCCTTC 61.684 60.000 0.00 0.00 36.13 3.46
3407 10937 1.736645 CGTCGGTGTCGCATTCCTT 60.737 57.895 0.00 0.00 36.13 3.36
3408 10938 2.126071 CGTCGGTGTCGCATTCCT 60.126 61.111 0.00 0.00 36.13 3.36
3409 10939 2.126228 TCGTCGGTGTCGCATTCC 60.126 61.111 0.00 0.00 36.13 3.01
3410 10940 2.774951 CGTCGTCGGTGTCGCATTC 61.775 63.158 0.00 0.00 36.13 2.67
3411 10941 2.803670 CGTCGTCGGTGTCGCATT 60.804 61.111 0.00 0.00 36.13 3.56
3429 10959 2.743928 GACTTGTCCGGGCAGCAG 60.744 66.667 9.61 7.67 0.00 4.24
3430 10960 4.329545 GGACTTGTCCGGGCAGCA 62.330 66.667 9.61 0.00 0.00 4.41
3431 10961 2.579684 CTAGGACTTGTCCGGGCAGC 62.580 65.000 9.61 2.60 34.28 5.25
3432 10962 1.517832 CTAGGACTTGTCCGGGCAG 59.482 63.158 9.61 6.39 34.28 4.85
3433 10963 1.987855 CCTAGGACTTGTCCGGGCA 60.988 63.158 3.51 3.51 34.28 5.36
3434 10964 2.732619 CCCTAGGACTTGTCCGGGC 61.733 68.421 11.48 0.00 34.28 6.13
3435 10965 0.908180 AACCCTAGGACTTGTCCGGG 60.908 60.000 22.86 22.86 36.74 5.73
3436 10966 0.981943 AAACCCTAGGACTTGTCCGG 59.018 55.000 11.48 11.34 34.28 5.14
3437 10967 1.066358 GGAAACCCTAGGACTTGTCCG 60.066 57.143 11.48 3.02 34.28 4.79
3438 10968 2.783609 GGAAACCCTAGGACTTGTCC 57.216 55.000 11.48 11.59 0.00 4.02
3468 10998 3.330720 CACCACCCACCTCCCTCC 61.331 72.222 0.00 0.00 0.00 4.30
3469 10999 1.208165 ATTCACCACCCACCTCCCTC 61.208 60.000 0.00 0.00 0.00 4.30
3470 11000 0.120377 TATTCACCACCCACCTCCCT 59.880 55.000 0.00 0.00 0.00 4.20
3471 11001 0.255033 GTATTCACCACCCACCTCCC 59.745 60.000 0.00 0.00 0.00 4.30
3472 11002 0.255033 GGTATTCACCACCCACCTCC 59.745 60.000 0.00 0.00 45.04 4.30
3473 11003 3.875865 GGTATTCACCACCCACCTC 57.124 57.895 0.00 0.00 45.04 3.85
3483 11013 0.392060 GGGTGTCGGGTGGTATTCAC 60.392 60.000 0.00 0.00 45.34 3.18
3484 11014 0.545787 AGGGTGTCGGGTGGTATTCA 60.546 55.000 0.00 0.00 0.00 2.57
3485 11015 0.177373 GAGGGTGTCGGGTGGTATTC 59.823 60.000 0.00 0.00 0.00 1.75
3486 11016 1.269703 GGAGGGTGTCGGGTGGTATT 61.270 60.000 0.00 0.00 0.00 1.89
3487 11017 1.688187 GGAGGGTGTCGGGTGGTAT 60.688 63.158 0.00 0.00 0.00 2.73
3488 11018 2.284112 GGAGGGTGTCGGGTGGTA 60.284 66.667 0.00 0.00 0.00 3.25
3489 11019 4.567597 TGGAGGGTGTCGGGTGGT 62.568 66.667 0.00 0.00 0.00 4.16
3490 11020 3.706373 CTGGAGGGTGTCGGGTGG 61.706 72.222 0.00 0.00 0.00 4.61
3491 11021 3.706373 CCTGGAGGGTGTCGGGTG 61.706 72.222 0.00 0.00 0.00 4.61
3492 11022 3.477956 TTCCTGGAGGGTGTCGGGT 62.478 63.158 0.00 0.00 36.25 5.28
3493 11023 2.606519 TTCCTGGAGGGTGTCGGG 60.607 66.667 0.00 0.00 36.25 5.14
3494 11024 2.660064 CCTTCCTGGAGGGTGTCGG 61.660 68.421 16.37 0.00 38.35 4.79
3495 11025 1.609501 TCCTTCCTGGAGGGTGTCG 60.610 63.158 22.72 0.00 40.56 4.35
3496 11026 4.561155 TCCTTCCTGGAGGGTGTC 57.439 61.111 22.72 0.00 40.56 3.67
3498 11028 2.466724 ACCATTCCTTCCTGGAGGGTG 61.467 57.143 22.72 15.02 46.18 4.61
3503 11033 1.139498 TGCCACCATTCCTTCCTGGA 61.139 55.000 0.00 0.00 44.51 3.86
3504 11034 0.967380 GTGCCACCATTCCTTCCTGG 60.967 60.000 0.00 0.00 38.55 4.45
3505 11035 0.967380 GGTGCCACCATTCCTTCCTG 60.967 60.000 9.55 0.00 38.42 3.86
3506 11036 1.384191 GGTGCCACCATTCCTTCCT 59.616 57.895 9.55 0.00 38.42 3.36
3507 11037 1.682344 GGGTGCCACCATTCCTTCC 60.682 63.158 17.22 0.00 41.02 3.46
3508 11038 2.046285 CGGGTGCCACCATTCCTTC 61.046 63.158 17.22 0.00 41.02 3.46
3509 11039 2.035626 CGGGTGCCACCATTCCTT 59.964 61.111 17.22 0.00 41.02 3.36
3510 11040 4.740822 GCGGGTGCCACCATTCCT 62.741 66.667 17.22 0.00 41.02 3.36
3512 11042 3.443045 CTGCGGGTGCCACCATTC 61.443 66.667 17.22 4.27 41.02 2.67
3531 11061 3.986006 GGCCTCGACGTGGTGACA 61.986 66.667 16.67 0.00 38.70 3.58
3534 11064 4.351938 TTCGGCCTCGACGTGGTG 62.352 66.667 16.67 10.18 45.92 4.17
3535 11065 4.052229 CTTCGGCCTCGACGTGGT 62.052 66.667 16.67 0.00 45.92 4.16
3548 11078 2.438434 AAATCCCTGCCGGCTTCG 60.438 61.111 29.70 15.68 0.00 3.79
3549 11079 1.077429 AGAAATCCCTGCCGGCTTC 60.077 57.895 29.70 20.98 0.00 3.86
3550 11080 1.077429 GAGAAATCCCTGCCGGCTT 60.077 57.895 29.70 12.63 0.00 4.35
3551 11081 2.592308 GAGAAATCCCTGCCGGCT 59.408 61.111 29.70 4.49 0.00 5.52
3552 11082 2.517166 GGAGAAATCCCTGCCGGC 60.517 66.667 22.73 22.73 0.00 6.13
3553 11083 2.193248 GGGAGAAATCCCTGCCGG 59.807 66.667 6.05 0.00 46.39 6.13
3559 11089 0.183731 AGGAATGCGGGAGAAATCCC 59.816 55.000 3.03 3.03 46.43 3.85
3560 11090 2.368875 TCTAGGAATGCGGGAGAAATCC 59.631 50.000 0.00 0.00 0.00 3.01
3561 11091 3.394719 GTCTAGGAATGCGGGAGAAATC 58.605 50.000 0.00 0.00 0.00 2.17
3562 11092 2.104963 GGTCTAGGAATGCGGGAGAAAT 59.895 50.000 0.00 0.00 0.00 2.17
3563 11093 1.485066 GGTCTAGGAATGCGGGAGAAA 59.515 52.381 0.00 0.00 0.00 2.52
3564 11094 1.120530 GGTCTAGGAATGCGGGAGAA 58.879 55.000 0.00 0.00 0.00 2.87
3565 11095 0.759436 GGGTCTAGGAATGCGGGAGA 60.759 60.000 0.00 0.00 0.00 3.71
3566 11096 1.048724 TGGGTCTAGGAATGCGGGAG 61.049 60.000 0.00 0.00 0.00 4.30
3567 11097 0.619255 TTGGGTCTAGGAATGCGGGA 60.619 55.000 0.00 0.00 0.00 5.14
3568 11098 0.463833 GTTGGGTCTAGGAATGCGGG 60.464 60.000 0.00 0.00 0.00 6.13
3569 11099 0.463833 GGTTGGGTCTAGGAATGCGG 60.464 60.000 0.00 0.00 0.00 5.69
3570 11100 0.810031 CGGTTGGGTCTAGGAATGCG 60.810 60.000 0.00 0.00 0.00 4.73
3571 11101 1.095807 GCGGTTGGGTCTAGGAATGC 61.096 60.000 0.00 0.00 0.00 3.56
3572 11102 0.463833 GGCGGTTGGGTCTAGGAATG 60.464 60.000 0.00 0.00 0.00 2.67
3573 11103 1.632965 GGGCGGTTGGGTCTAGGAAT 61.633 60.000 0.00 0.00 0.00 3.01
3574 11104 2.295602 GGGCGGTTGGGTCTAGGAA 61.296 63.158 0.00 0.00 0.00 3.36
3575 11105 2.686106 GGGCGGTTGGGTCTAGGA 60.686 66.667 0.00 0.00 0.00 2.94
3576 11106 2.598787 TTGGGCGGTTGGGTCTAGG 61.599 63.158 0.00 0.00 0.00 3.02
3577 11107 1.376812 GTTGGGCGGTTGGGTCTAG 60.377 63.158 0.00 0.00 0.00 2.43
3578 11108 2.751688 GTTGGGCGGTTGGGTCTA 59.248 61.111 0.00 0.00 0.00 2.59
3579 11109 4.280019 GGTTGGGCGGTTGGGTCT 62.280 66.667 0.00 0.00 0.00 3.85
3583 11113 4.733542 ATCCGGTTGGGCGGTTGG 62.734 66.667 0.00 0.00 35.24 3.77
3584 11114 3.439540 CATCCGGTTGGGCGGTTG 61.440 66.667 0.00 0.00 35.24 3.77
3585 11115 4.733542 CCATCCGGTTGGGCGGTT 62.734 66.667 22.04 0.00 35.24 4.44
3587 11117 4.418328 TTCCATCCGGTTGGGCGG 62.418 66.667 27.57 6.03 37.37 6.13
3588 11118 3.131478 GTTCCATCCGGTTGGGCG 61.131 66.667 27.57 6.35 37.37 6.13
3589 11119 2.754254 GGTTCCATCCGGTTGGGC 60.754 66.667 27.57 20.45 37.37 5.36
3590 11120 2.437716 CGGTTCCATCCGGTTGGG 60.438 66.667 27.57 15.65 45.88 4.12
3597 11127 1.949465 ATTAAGCGTCGGTTCCATCC 58.051 50.000 13.76 0.00 0.00 3.51
3598 11128 3.493503 CCTAATTAAGCGTCGGTTCCATC 59.506 47.826 13.76 0.00 0.00 3.51
3599 11129 3.463944 CCTAATTAAGCGTCGGTTCCAT 58.536 45.455 13.76 4.53 0.00 3.41
3600 11130 2.896168 CCTAATTAAGCGTCGGTTCCA 58.104 47.619 13.76 2.10 0.00 3.53
3601 11131 1.596260 GCCTAATTAAGCGTCGGTTCC 59.404 52.381 13.76 0.00 0.00 3.62
3610 11140 4.884247 ACAGGAGATACGCCTAATTAAGC 58.116 43.478 0.00 0.00 31.11 3.09
3611 11141 7.450124 TCTACAGGAGATACGCCTAATTAAG 57.550 40.000 0.00 0.00 31.11 1.85
3612 11142 7.828508 TTCTACAGGAGATACGCCTAATTAA 57.171 36.000 0.00 0.00 31.11 1.40
3613 11143 7.828508 TTTCTACAGGAGATACGCCTAATTA 57.171 36.000 0.00 0.00 31.11 1.40
3614 11144 6.726490 TTTCTACAGGAGATACGCCTAATT 57.274 37.500 0.00 0.00 31.11 1.40
3615 11145 6.919775 ATTTCTACAGGAGATACGCCTAAT 57.080 37.500 0.00 0.00 31.11 1.73
3616 11146 6.433404 CCTATTTCTACAGGAGATACGCCTAA 59.567 42.308 0.00 0.00 31.11 2.69
3617 11147 5.944599 CCTATTTCTACAGGAGATACGCCTA 59.055 44.000 0.00 0.00 31.11 3.93
3618 11148 4.767928 CCTATTTCTACAGGAGATACGCCT 59.232 45.833 0.00 0.00 32.88 5.52
3619 11149 4.618693 GCCTATTTCTACAGGAGATACGCC 60.619 50.000 0.00 0.00 32.88 5.68
3620 11150 4.022242 TGCCTATTTCTACAGGAGATACGC 60.022 45.833 0.00 0.00 32.88 4.42
3621 11151 5.241949 ACTGCCTATTTCTACAGGAGATACG 59.758 44.000 0.00 0.00 32.88 3.06
3622 11152 6.658188 ACTGCCTATTTCTACAGGAGATAC 57.342 41.667 0.00 0.00 32.88 2.24
3623 11153 8.958060 ATTACTGCCTATTTCTACAGGAGATA 57.042 34.615 0.00 0.00 32.88 1.98
3624 11154 7.863901 ATTACTGCCTATTTCTACAGGAGAT 57.136 36.000 0.00 0.00 32.88 2.75
3625 11155 8.005388 AGTATTACTGCCTATTTCTACAGGAGA 58.995 37.037 0.00 0.00 33.42 3.71
3626 11156 8.184304 AGTATTACTGCCTATTTCTACAGGAG 57.816 38.462 0.00 0.00 33.42 3.69
3627 11157 8.548880 AAGTATTACTGCCTATTTCTACAGGA 57.451 34.615 0.00 0.00 33.42 3.86
3628 11158 8.421784 TGAAGTATTACTGCCTATTTCTACAGG 58.578 37.037 0.00 0.00 34.40 4.00
3629 11159 9.469807 CTGAAGTATTACTGCCTATTTCTACAG 57.530 37.037 0.00 0.00 36.22 2.74
3630 11160 9.197306 TCTGAAGTATTACTGCCTATTTCTACA 57.803 33.333 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.