Multiple sequence alignment - TraesCS1D01G283100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G283100 chr1D 100.000 7835 0 0 1 7835 381037870 381030036 0.000000e+00 14469
1 TraesCS1D01G283100 chr1A 92.958 5098 214 49 494 5545 481703391 481698393 0.000000e+00 7291
2 TraesCS1D01G283100 chr1A 92.516 2031 93 24 5598 7589 481692700 481690690 0.000000e+00 2854
3 TraesCS1D01G283100 chr1A 96.226 106 3 1 5498 5603 481698396 481698292 1.050000e-38 172
4 TraesCS1D01G283100 chr1B 92.978 2834 132 21 4814 7601 510981793 510978981 0.000000e+00 4069
5 TraesCS1D01G283100 chr1B 94.288 1558 67 10 3263 4816 510983419 510981880 0.000000e+00 2364
6 TraesCS1D01G283100 chr1B 90.235 1321 89 26 675 1979 510985965 510984669 0.000000e+00 1688
7 TraesCS1D01G283100 chr1B 93.239 991 43 11 2291 3264 510984429 510983446 0.000000e+00 1437
8 TraesCS1D01G283100 chr1B 87.209 258 10 7 2015 2264 510984669 510984427 1.000000e-68 272
9 TraesCS1D01G283100 chr1B 91.620 179 6 3 488 666 510986261 510986092 1.020000e-58 239
10 TraesCS1D01G283100 chr1B 88.421 190 12 2 4 183 510986702 510986513 3.680000e-53 220
11 TraesCS1D01G283100 chr5D 89.474 152 6 1 7598 7739 515109683 515109834 4.830000e-42 183
12 TraesCS1D01G283100 chr5D 83.007 153 17 4 7594 7737 268690559 268690711 6.380000e-26 130
13 TraesCS1D01G283100 chr5A 88.816 152 7 1 7598 7739 643325174 643325325 2.250000e-40 178
14 TraesCS1D01G283100 chr5B 87.500 152 9 1 7598 7739 647900693 647900844 4.860000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G283100 chr1D 381030036 381037870 7834 True 14469.000000 14469 100.000000 1 7835 1 chr1D.!!$R1 7834
1 TraesCS1D01G283100 chr1A 481698292 481703391 5099 True 3731.500000 7291 94.592000 494 5603 2 chr1A.!!$R2 5109
2 TraesCS1D01G283100 chr1A 481690690 481692700 2010 True 2854.000000 2854 92.516000 5598 7589 1 chr1A.!!$R1 1991
3 TraesCS1D01G283100 chr1B 510978981 510986702 7721 True 1469.857143 4069 91.141429 4 7601 7 chr1B.!!$R1 7597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
213 224 0.313043 TTGACTCTGAACGACCGACC 59.687 55.0 0.00 0.0 0.00 4.79 F
658 691 0.341609 CTTCCTTCCTCCCCTCCTCT 59.658 60.0 0.00 0.0 0.00 3.69 F
1454 1619 0.034089 GGCTATGGGCAGGAAAGTGT 60.034 55.0 0.00 0.0 44.01 3.55 F
2084 2250 0.469144 TTTTGGGTTCCCTCAGCACC 60.469 55.0 9.43 0.0 0.00 5.01 F
2261 2434 0.603707 TGCTGGCTGACACTTGTAGC 60.604 55.0 0.00 0.0 36.74 3.58 F
2262 2435 0.603707 GCTGGCTGACACTTGTAGCA 60.604 55.0 0.00 0.0 39.15 3.49 F
3523 3772 1.755179 ATCTGTGTTGTATGCAGCCC 58.245 50.0 0.00 0.0 0.00 5.19 F
5007 5350 1.110442 AGCTTGTCCCTCATCGAGAG 58.890 55.0 0.00 0.0 44.31 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1188 1348 0.453793 CGAACAGCAGAGTCCGAGAT 59.546 55.000 0.00 0.0 0.0 2.75 R
1537 1703 0.537143 CTAAGCCCCACACACAGCAA 60.537 55.000 0.00 0.0 0.0 3.91 R
3309 3557 0.318441 CCTCTCACTCTCAACCGCAA 59.682 55.000 0.00 0.0 0.0 4.85 R
4038 4287 3.504520 TCTGGGACCAAATTAGAAAACGC 59.495 43.478 0.00 0.0 0.0 4.84 R
4239 4488 6.560003 TTTATTGTGAATAGGAGGAGCTGA 57.440 37.500 0.00 0.0 0.0 4.26 R
4356 4607 0.402121 AACCAGGAAAGAGGACAGCC 59.598 55.000 0.00 0.0 0.0 4.85 R
5350 5698 0.308993 GCAGAACAGCCAAGTGACAC 59.691 55.000 0.00 0.0 0.0 3.67 R
6926 7353 0.606130 TGCATGCACACGGAACTCAT 60.606 50.000 18.46 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.721399 AGATAAGATTTTCATCGGGCAAGTATT 59.279 33.333 0.00 0.00 34.17 1.89
33 34 4.339247 AGATTTTCATCGGGCAAGTATTGG 59.661 41.667 0.00 0.00 39.56 3.16
48 49 6.741109 CAAGTATTGGCAATGATCAATAGCA 58.259 36.000 22.57 0.00 43.94 3.49
55 56 3.846023 GCAATGATCAATAGCAACGACCG 60.846 47.826 0.00 0.00 0.00 4.79
60 61 0.999406 CAATAGCAACGACCGTCCAG 59.001 55.000 0.00 0.00 0.00 3.86
108 110 4.627611 AACTACGCGCAGACTATTCTTA 57.372 40.909 14.52 0.00 0.00 2.10
131 133 2.416747 CAGCGATCAGTTTTCAGACCA 58.583 47.619 0.00 0.00 0.00 4.02
158 169 1.266989 CCTTTTGTTCCGCTCCTTCAC 59.733 52.381 0.00 0.00 0.00 3.18
165 176 0.391597 TCCGCTCCTTCACGTTTCTT 59.608 50.000 0.00 0.00 0.00 2.52
183 194 7.115947 ACGTTTCTTGTAATTTCTAACTCGAGG 59.884 37.037 18.41 0.00 0.00 4.63
184 195 7.327761 CGTTTCTTGTAATTTCTAACTCGAGGA 59.672 37.037 18.41 1.05 0.00 3.71
187 198 7.490000 TCTTGTAATTTCTAACTCGAGGATCC 58.510 38.462 18.41 2.48 0.00 3.36
188 199 7.342284 TCTTGTAATTTCTAACTCGAGGATCCT 59.658 37.037 16.13 16.13 0.00 3.24
189 200 7.419711 TGTAATTTCTAACTCGAGGATCCTT 57.580 36.000 17.42 1.26 0.00 3.36
191 202 5.538849 ATTTCTAACTCGAGGATCCTTCC 57.461 43.478 17.42 2.63 42.96 3.46
192 203 2.946785 TCTAACTCGAGGATCCTTCCC 58.053 52.381 17.42 1.80 43.76 3.97
193 204 2.243994 TCTAACTCGAGGATCCTTCCCA 59.756 50.000 17.42 0.00 43.76 4.37
194 205 2.182516 AACTCGAGGATCCTTCCCAT 57.817 50.000 17.42 0.00 43.76 4.00
195 206 2.182516 ACTCGAGGATCCTTCCCATT 57.817 50.000 17.42 0.00 43.76 3.16
196 207 1.765314 ACTCGAGGATCCTTCCCATTG 59.235 52.381 17.42 5.15 43.76 2.82
197 208 2.042464 CTCGAGGATCCTTCCCATTGA 58.958 52.381 17.42 0.70 43.76 2.57
199 210 1.765314 CGAGGATCCTTCCCATTGACT 59.235 52.381 17.42 0.00 43.76 3.41
201 212 3.044894 GAGGATCCTTCCCATTGACTCT 58.955 50.000 17.42 0.00 43.76 3.24
202 213 2.776536 AGGATCCTTCCCATTGACTCTG 59.223 50.000 9.02 0.00 43.76 3.35
203 214 2.774234 GGATCCTTCCCATTGACTCTGA 59.226 50.000 3.84 0.00 35.84 3.27
204 215 3.200825 GGATCCTTCCCATTGACTCTGAA 59.799 47.826 3.84 0.00 35.84 3.02
205 216 3.703001 TCCTTCCCATTGACTCTGAAC 57.297 47.619 0.00 0.00 0.00 3.18
207 218 2.028112 CCTTCCCATTGACTCTGAACGA 60.028 50.000 0.00 0.00 0.00 3.85
209 220 1.275291 TCCCATTGACTCTGAACGACC 59.725 52.381 0.00 0.00 0.00 4.79
210 221 1.350193 CCATTGACTCTGAACGACCG 58.650 55.000 0.00 0.00 0.00 4.79
211 222 1.067846 CCATTGACTCTGAACGACCGA 60.068 52.381 0.00 0.00 0.00 4.69
213 224 0.313043 TTGACTCTGAACGACCGACC 59.687 55.000 0.00 0.00 0.00 4.79
215 226 0.386985 GACTCTGAACGACCGACCAC 60.387 60.000 0.00 0.00 0.00 4.16
216 227 1.442184 CTCTGAACGACCGACCACG 60.442 63.158 0.00 0.00 39.43 4.94
239 250 4.142966 GGTACGTGGAAAAGCTGTTGATAC 60.143 45.833 0.00 0.00 0.00 2.24
240 251 3.472652 ACGTGGAAAAGCTGTTGATACA 58.527 40.909 0.00 0.00 0.00 2.29
253 264 3.254903 TGTTGATACAGTACTCTGCACGT 59.745 43.478 0.00 0.00 44.77 4.49
254 265 3.487563 TGATACAGTACTCTGCACGTG 57.512 47.619 12.28 12.28 44.77 4.49
255 266 2.817844 TGATACAGTACTCTGCACGTGT 59.182 45.455 18.38 0.00 44.77 4.49
256 267 2.699251 TACAGTACTCTGCACGTGTG 57.301 50.000 18.38 10.72 44.77 3.82
269 280 2.268298 CACGTGTGCACTCTATAACCC 58.732 52.381 19.41 0.00 0.00 4.11
270 281 1.897133 ACGTGTGCACTCTATAACCCA 59.103 47.619 19.41 0.00 0.00 4.51
271 282 2.268298 CGTGTGCACTCTATAACCCAC 58.732 52.381 19.41 2.47 0.00 4.61
272 283 2.268298 GTGTGCACTCTATAACCCACG 58.732 52.381 19.41 0.00 0.00 4.94
273 284 1.206132 TGTGCACTCTATAACCCACGG 59.794 52.381 19.41 0.00 0.00 4.94
274 285 1.206371 GTGCACTCTATAACCCACGGT 59.794 52.381 10.32 0.00 37.65 4.83
276 287 3.098377 TGCACTCTATAACCCACGGTAA 58.902 45.455 0.00 0.00 33.12 2.85
277 288 3.514706 TGCACTCTATAACCCACGGTAAA 59.485 43.478 0.00 0.00 33.12 2.01
305 326 7.772332 AAAGACACCGACAATAAGCTAATAG 57.228 36.000 0.00 0.00 0.00 1.73
312 333 7.170828 CACCGACAATAAGCTAATAGTTGCATA 59.829 37.037 0.00 0.00 0.00 3.14
313 334 7.878127 ACCGACAATAAGCTAATAGTTGCATAT 59.122 33.333 0.00 0.00 0.00 1.78
330 351 9.853555 AGTTGCATATAACGAAAATCAAAATCA 57.146 25.926 0.00 0.00 35.73 2.57
368 389 2.165641 TCGAGTACAAATGGATCACGCT 59.834 45.455 0.00 0.00 0.00 5.07
378 399 5.947228 AATGGATCACGCTACATAAATGG 57.053 39.130 0.00 0.00 0.00 3.16
381 402 4.814234 TGGATCACGCTACATAAATGGAAC 59.186 41.667 0.00 0.00 0.00 3.62
383 404 4.112716 TCACGCTACATAAATGGAACGA 57.887 40.909 5.05 0.00 0.00 3.85
384 405 4.109766 TCACGCTACATAAATGGAACGAG 58.890 43.478 5.05 0.00 0.00 4.18
385 406 4.109766 CACGCTACATAAATGGAACGAGA 58.890 43.478 5.05 0.00 0.00 4.04
386 407 4.565166 CACGCTACATAAATGGAACGAGAA 59.435 41.667 5.05 0.00 0.00 2.87
388 409 5.815740 ACGCTACATAAATGGAACGAGAATT 59.184 36.000 5.05 0.00 0.00 2.17
389 410 6.129393 CGCTACATAAATGGAACGAGAATTG 58.871 40.000 0.00 0.00 0.00 2.32
390 411 5.909610 GCTACATAAATGGAACGAGAATTGC 59.090 40.000 0.00 0.00 0.00 3.56
391 412 6.238484 GCTACATAAATGGAACGAGAATTGCT 60.238 38.462 0.00 0.00 0.00 3.91
392 413 7.042051 GCTACATAAATGGAACGAGAATTGCTA 60.042 37.037 0.00 0.00 0.00 3.49
393 414 7.251704 ACATAAATGGAACGAGAATTGCTAG 57.748 36.000 0.00 0.00 0.00 3.42
394 415 4.622701 AAATGGAACGAGAATTGCTAGC 57.377 40.909 8.10 8.10 0.00 3.42
395 416 2.760634 TGGAACGAGAATTGCTAGCA 57.239 45.000 14.93 14.93 0.00 3.49
396 417 2.621338 TGGAACGAGAATTGCTAGCAG 58.379 47.619 18.45 7.70 0.00 4.24
422 443 4.143094 GCTAGTGTGTGTTAAGCAAGCTAC 60.143 45.833 0.00 0.00 33.38 3.58
423 444 3.804036 AGTGTGTGTTAAGCAAGCTACA 58.196 40.909 0.00 0.00 0.00 2.74
424 445 3.809832 AGTGTGTGTTAAGCAAGCTACAG 59.190 43.478 0.00 0.00 0.00 2.74
425 446 3.560068 GTGTGTGTTAAGCAAGCTACAGT 59.440 43.478 0.00 0.00 0.00 3.55
428 449 3.985279 TGTGTTAAGCAAGCTACAGTACG 59.015 43.478 0.00 0.00 0.00 3.67
429 450 3.985925 GTGTTAAGCAAGCTACAGTACGT 59.014 43.478 0.00 0.00 0.00 3.57
430 451 5.156355 GTGTTAAGCAAGCTACAGTACGTA 58.844 41.667 0.00 0.00 0.00 3.57
448 469 5.275067 ACGTAGTAACTAACCACAAACCA 57.725 39.130 0.00 0.00 41.94 3.67
449 470 5.291971 ACGTAGTAACTAACCACAAACCAG 58.708 41.667 0.00 0.00 41.94 4.00
450 471 4.687483 CGTAGTAACTAACCACAAACCAGG 59.313 45.833 0.00 0.00 0.00 4.45
451 472 3.483421 AGTAACTAACCACAAACCAGGC 58.517 45.455 0.00 0.00 0.00 4.85
452 473 2.445682 AACTAACCACAAACCAGGCA 57.554 45.000 0.00 0.00 0.00 4.75
453 474 1.687563 ACTAACCACAAACCAGGCAC 58.312 50.000 0.00 0.00 0.00 5.01
454 475 0.958822 CTAACCACAAACCAGGCACC 59.041 55.000 0.00 0.00 0.00 5.01
455 476 0.468400 TAACCACAAACCAGGCACCC 60.468 55.000 0.00 0.00 0.00 4.61
456 477 2.917227 CCACAAACCAGGCACCCC 60.917 66.667 0.00 0.00 0.00 4.95
457 478 2.917227 CACAAACCAGGCACCCCC 60.917 66.667 0.00 0.00 0.00 5.40
469 490 4.548513 ACCCCCTGCCCGCAAAAA 62.549 61.111 0.00 0.00 0.00 1.94
591 612 4.824515 CTCCTCCTCGTCGCCCCT 62.825 72.222 0.00 0.00 0.00 4.79
658 691 0.341609 CTTCCTTCCTCCCCTCCTCT 59.658 60.000 0.00 0.00 0.00 3.69
841 990 0.769247 TACTCGATCCTCCCGATCCA 59.231 55.000 0.00 0.00 44.07 3.41
846 995 4.853142 TCCTCCCGATCCACCCCG 62.853 72.222 0.00 0.00 0.00 5.73
847 996 4.853142 CCTCCCGATCCACCCCGA 62.853 72.222 0.00 0.00 0.00 5.14
848 997 2.524394 CTCCCGATCCACCCCGAT 60.524 66.667 0.00 0.00 0.00 4.18
850 999 2.524394 CCCGATCCACCCCGATCT 60.524 66.667 0.00 0.00 37.16 2.75
852 1001 2.737180 CGATCCACCCCGATCTGG 59.263 66.667 0.00 0.00 37.16 3.86
858 1007 3.916184 ACCCCGATCTGGTGGTTT 58.084 55.556 2.19 0.00 37.87 3.27
859 1008 2.160646 ACCCCGATCTGGTGGTTTT 58.839 52.632 2.19 0.00 37.87 2.43
913 1069 2.738846 CCTCGGTTTTGATGTCTCTGTG 59.261 50.000 0.00 0.00 0.00 3.66
950 1107 1.034292 GGGGAGTTTCTGATGCTGGC 61.034 60.000 0.00 0.00 0.00 4.85
960 1117 3.332493 GATGCTGGCGTTGCTGTGG 62.332 63.158 0.00 0.00 0.00 4.17
1222 1382 0.602905 GTTCGGTGTTGCTGGCTAGT 60.603 55.000 0.00 0.00 0.00 2.57
1223 1383 0.602638 TTCGGTGTTGCTGGCTAGTG 60.603 55.000 0.00 0.00 0.00 2.74
1224 1384 2.034879 CGGTGTTGCTGGCTAGTGG 61.035 63.158 0.00 0.00 0.00 4.00
1225 1385 1.073199 GGTGTTGCTGGCTAGTGGT 59.927 57.895 0.00 0.00 0.00 4.16
1330 1495 1.873270 GCAATCGGGGTTGGGTTGTC 61.873 60.000 0.00 0.00 0.00 3.18
1411 1576 0.458669 CTGATGGGAAACATGGCTGC 59.541 55.000 0.00 0.00 40.72 5.25
1451 1616 1.152673 GGGGCTATGGGCAGGAAAG 60.153 63.158 4.70 0.00 44.01 2.62
1454 1619 0.034089 GGCTATGGGCAGGAAAGTGT 60.034 55.000 0.00 0.00 44.01 3.55
1456 1621 1.340017 GCTATGGGCAGGAAAGTGTGA 60.340 52.381 0.00 0.00 41.35 3.58
1478 1644 6.694411 GTGATTACAATCAGCATGTGGAAATC 59.306 38.462 4.89 0.31 45.38 2.17
1485 1651 2.350804 CAGCATGTGGAAATCAGTCTCG 59.649 50.000 0.00 0.00 0.00 4.04
1487 1653 2.283298 CATGTGGAAATCAGTCTCGGG 58.717 52.381 0.00 0.00 0.00 5.14
1507 1673 5.759273 TCGGGTTTTTGATTTCGAGAAACTA 59.241 36.000 0.00 0.00 32.51 2.24
1536 1702 5.812127 TGTTGAGATCATCTGTATTGGAACG 59.188 40.000 0.00 0.00 0.00 3.95
1537 1703 5.598416 TGAGATCATCTGTATTGGAACGT 57.402 39.130 0.00 0.00 0.00 3.99
1560 1726 2.423577 CTGTGTGTGGGGCTTAGTAAC 58.576 52.381 0.00 0.00 0.00 2.50
1562 1728 3.241156 TGTGTGTGGGGCTTAGTAACTA 58.759 45.455 0.00 0.00 0.00 2.24
1576 1742 8.045507 GGCTTAGTAACTAACTGTTAGGGAAAT 58.954 37.037 26.35 14.98 41.29 2.17
1755 1921 2.040813 AGTATGCTGGGCCATTGGATAG 59.959 50.000 6.72 2.01 0.00 2.08
1772 1938 6.254281 TGGATAGTTTTGCTTAACTTCTGC 57.746 37.500 8.88 4.66 39.08 4.26
1794 1960 4.578105 GCTGCCTTAGAAATCAGTATGCTT 59.422 41.667 0.00 0.00 34.76 3.91
1815 1981 1.421268 TCTTGGTTGAGGCACAGTGAT 59.579 47.619 4.15 0.00 0.00 3.06
1831 1997 1.198637 GTGATGGTTGCTTCTCAGTGC 59.801 52.381 0.00 0.00 0.00 4.40
1833 1999 2.302733 TGATGGTTGCTTCTCAGTGCTA 59.697 45.455 0.00 0.00 0.00 3.49
1876 2042 9.139174 GTGGTGATTTACATTGGTTTTAATGAG 57.861 33.333 5.58 0.00 39.79 2.90
1899 2065 2.818130 ATGTGCACATGTTTTGGTCC 57.182 45.000 30.92 0.00 34.83 4.46
1902 2068 2.100584 TGTGCACATGTTTTGGTCCTTC 59.899 45.455 17.42 0.00 0.00 3.46
1913 2079 6.801575 TGTTTTGGTCCTTCTATGTTTCAAC 58.198 36.000 0.00 0.00 0.00 3.18
1979 2145 8.810427 CAGATTTGGTATGTGTAAATGCATTTC 58.190 33.333 27.28 18.37 0.00 2.17
2008 2174 9.744468 GATAAATAGTTGTCAACCAAGTTTGTT 57.256 29.630 12.17 0.00 37.82 2.83
2013 2179 4.364415 TGTCAACCAAGTTTGTTAGTGC 57.636 40.909 0.00 0.00 0.00 4.40
2026 2192 6.373216 AGTTTGTTAGTGCTGTGTTTGTTAGA 59.627 34.615 0.00 0.00 0.00 2.10
2084 2250 0.469144 TTTTGGGTTCCCTCAGCACC 60.469 55.000 9.43 0.00 0.00 5.01
2100 2272 1.203523 GCACCGGAACATGCCAATTTA 59.796 47.619 9.46 0.00 34.44 1.40
2116 2288 7.709947 TGCCAATTTAAGCTTATCAAGATGAG 58.290 34.615 7.08 0.00 0.00 2.90
2125 2297 8.540507 AAGCTTATCAAGATGAGTACTTAGGA 57.459 34.615 0.00 0.00 0.00 2.94
2126 2298 8.177119 AGCTTATCAAGATGAGTACTTAGGAG 57.823 38.462 0.00 0.00 0.00 3.69
2127 2299 7.782644 AGCTTATCAAGATGAGTACTTAGGAGT 59.217 37.037 0.00 0.00 39.97 3.85
2128 2300 8.417884 GCTTATCAAGATGAGTACTTAGGAGTT 58.582 37.037 0.00 0.00 37.33 3.01
2131 2303 7.317842 TCAAGATGAGTACTTAGGAGTTACG 57.682 40.000 0.00 0.00 37.33 3.18
2132 2304 7.108194 TCAAGATGAGTACTTAGGAGTTACGA 58.892 38.462 0.00 0.00 37.33 3.43
2133 2305 7.609146 TCAAGATGAGTACTTAGGAGTTACGAA 59.391 37.037 0.00 0.00 37.33 3.85
2134 2306 7.556733 AGATGAGTACTTAGGAGTTACGAAG 57.443 40.000 0.00 0.00 37.33 3.79
2214 2387 1.274167 CATGTGCCAGCAATGAAGGTT 59.726 47.619 0.00 0.00 0.00 3.50
2216 2389 1.068895 TGTGCCAGCAATGAAGGTTTG 59.931 47.619 0.00 0.00 0.00 2.93
2220 2393 3.831333 TGCCAGCAATGAAGGTTTGATAA 59.169 39.130 0.00 0.00 0.00 1.75
2261 2434 0.603707 TGCTGGCTGACACTTGTAGC 60.604 55.000 0.00 0.00 36.74 3.58
2262 2435 0.603707 GCTGGCTGACACTTGTAGCA 60.604 55.000 0.00 0.00 39.15 3.49
2263 2436 1.947678 GCTGGCTGACACTTGTAGCAT 60.948 52.381 0.00 0.00 39.15 3.79
2264 2437 2.677902 GCTGGCTGACACTTGTAGCATA 60.678 50.000 0.00 0.00 39.15 3.14
2265 2438 3.193263 CTGGCTGACACTTGTAGCATAG 58.807 50.000 0.00 0.00 39.15 2.23
2266 2439 2.567169 TGGCTGACACTTGTAGCATAGT 59.433 45.455 0.00 0.00 39.15 2.12
2267 2440 3.007940 TGGCTGACACTTGTAGCATAGTT 59.992 43.478 0.00 0.00 39.15 2.24
2268 2441 4.221924 TGGCTGACACTTGTAGCATAGTTA 59.778 41.667 0.00 0.00 39.15 2.24
2269 2442 5.175859 GGCTGACACTTGTAGCATAGTTAA 58.824 41.667 0.00 0.00 39.15 2.01
2270 2443 5.642063 GGCTGACACTTGTAGCATAGTTAAA 59.358 40.000 0.00 0.00 39.15 1.52
2271 2444 6.316390 GGCTGACACTTGTAGCATAGTTAAAT 59.684 38.462 0.00 0.00 39.15 1.40
2272 2445 7.148239 GGCTGACACTTGTAGCATAGTTAAATT 60.148 37.037 0.00 0.00 39.15 1.82
2273 2446 7.693951 GCTGACACTTGTAGCATAGTTAAATTG 59.306 37.037 0.00 0.00 37.40 2.32
2274 2447 8.615878 TGACACTTGTAGCATAGTTAAATTGT 57.384 30.769 0.00 0.00 0.00 2.71
2275 2448 8.717821 TGACACTTGTAGCATAGTTAAATTGTC 58.282 33.333 0.00 0.00 0.00 3.18
2276 2449 8.848474 ACACTTGTAGCATAGTTAAATTGTCT 57.152 30.769 0.00 0.00 0.00 3.41
2277 2450 8.721478 ACACTTGTAGCATAGTTAAATTGTCTG 58.279 33.333 0.00 0.00 0.00 3.51
2278 2451 8.935844 CACTTGTAGCATAGTTAAATTGTCTGA 58.064 33.333 0.00 0.00 0.00 3.27
2279 2452 9.502091 ACTTGTAGCATAGTTAAATTGTCTGAA 57.498 29.630 0.00 0.00 0.00 3.02
2282 2455 9.448438 TGTAGCATAGTTAAATTGTCTGAATGT 57.552 29.630 0.00 0.00 0.00 2.71
2323 2525 6.441093 TCATTAGTTGCTTGCCTAATTCTG 57.559 37.500 0.00 0.00 32.84 3.02
2436 2638 2.787994 AGGTTTTCTCATGGCTCTGTG 58.212 47.619 0.00 0.00 0.00 3.66
2488 2690 2.874701 GAGAGAAAAGCAACAGTCAGCA 59.125 45.455 1.25 0.00 0.00 4.41
2505 2707 4.870991 GTCAGCATTTAGGTACCAGAAGTC 59.129 45.833 15.94 4.42 0.00 3.01
2540 2743 2.603075 TGGTTATTCTTGCCTTGCCT 57.397 45.000 0.00 0.00 0.00 4.75
2541 2744 2.170166 TGGTTATTCTTGCCTTGCCTG 58.830 47.619 0.00 0.00 0.00 4.85
2580 2783 5.221244 ACCCTGTTTTGCATCTTCAGTTTAC 60.221 40.000 0.00 0.00 0.00 2.01
2641 2850 5.955488 TCATACTCTATCAGGCGAATAAGC 58.045 41.667 0.00 0.00 0.00 3.09
2802 3011 5.913514 GCATCTGCTATTATCTTGCTTTGTG 59.086 40.000 0.00 0.00 38.21 3.33
2803 3012 6.459298 GCATCTGCTATTATCTTGCTTTGTGT 60.459 38.462 0.00 0.00 38.21 3.72
2804 3013 6.668541 TCTGCTATTATCTTGCTTTGTGTC 57.331 37.500 0.00 0.00 0.00 3.67
2806 3015 6.881065 TCTGCTATTATCTTGCTTTGTGTCTT 59.119 34.615 0.00 0.00 0.00 3.01
2807 3016 7.391554 TCTGCTATTATCTTGCTTTGTGTCTTT 59.608 33.333 0.00 0.00 0.00 2.52
2809 3018 6.969473 GCTATTATCTTGCTTTGTGTCTTTCC 59.031 38.462 0.00 0.00 0.00 3.13
3131 3350 6.070881 AGGATAGGTTGCTTGCTCTCATATAG 60.071 42.308 0.00 0.00 0.00 1.31
3281 3529 8.780616 AATAGATATATCTCATGCTAGGCAGT 57.219 34.615 18.59 0.00 39.07 4.40
3337 3585 2.762887 TGAGAGTGAGAGGCATGTTAGG 59.237 50.000 0.00 0.00 0.00 2.69
3357 3606 8.100791 TGTTAGGATCATATCGGGGAAAATAAG 58.899 37.037 0.00 0.00 0.00 1.73
3523 3772 1.755179 ATCTGTGTTGTATGCAGCCC 58.245 50.000 0.00 0.00 0.00 5.19
3552 3801 6.531503 TTCCCTGATAGAACAGAAGTACAG 57.468 41.667 0.00 0.00 39.94 2.74
3924 4173 5.047092 CCTTGCCTAAGACAAATTGTGGAAT 60.047 40.000 2.20 0.00 35.92 3.01
3928 4177 6.663093 TGCCTAAGACAAATTGTGGAATACAT 59.337 34.615 2.20 0.00 39.48 2.29
4019 4268 6.591062 TGGCTATTTTGAGCTGCATTTAAAAG 59.409 34.615 1.02 0.00 42.43 2.27
4078 4327 4.437239 CCAGAGATAATGCGAACTTCAGT 58.563 43.478 0.00 0.00 0.00 3.41
4239 4488 6.796785 AAATGGCCACAGAAATATAAAGCT 57.203 33.333 8.16 0.00 0.00 3.74
4273 4522 8.107095 TCCTATTCACAATAAAACAGCTAACCT 58.893 33.333 0.00 0.00 0.00 3.50
4355 4606 1.474478 CTGTAGCACAGTGGATCTCGT 59.526 52.381 1.84 0.00 41.19 4.18
4356 4607 1.202348 TGTAGCACAGTGGATCTCGTG 59.798 52.381 1.84 0.00 0.00 4.35
4395 4646 5.049267 TGGTTGCTTTAAGTTTAGCTTACCG 60.049 40.000 18.35 0.00 41.49 4.02
4458 4709 7.862675 AGTAGAATATTTACTTGGTTCTGGCT 58.137 34.615 0.00 0.00 32.02 4.75
4802 5056 4.272018 GTCACATCATCCTTCATTCCTTCG 59.728 45.833 0.00 0.00 0.00 3.79
4812 5155 4.518970 CCTTCATTCCTTCGTCTTGGAAAA 59.481 41.667 0.00 0.00 44.34 2.29
4865 5208 2.224113 CCTTTTGCTTGCCAAGTGATGT 60.224 45.455 6.28 0.00 34.34 3.06
4887 5230 7.833285 TGTTCTGTGTATCATGCCTAGTATA 57.167 36.000 0.00 0.00 0.00 1.47
5007 5350 1.110442 AGCTTGTCCCTCATCGAGAG 58.890 55.000 0.00 0.00 44.31 3.20
5064 5408 7.597743 CCGACTAAAAGTTTAGCAAAGTCTAGA 59.402 37.037 10.13 0.00 42.98 2.43
5086 5430 5.888161 AGATTGGACTTGAACAGTTTGAGTT 59.112 36.000 4.53 0.00 35.01 3.01
5277 5623 6.677781 TGTGCTTATCTTGTTATACCAAGC 57.322 37.500 5.19 0.00 41.29 4.01
5298 5644 8.015658 CCAAGCATAGTAGTTACAAAAAGACAC 58.984 37.037 0.00 0.00 0.00 3.67
5335 5683 4.469227 ACAGGATTGATCTGCTAGTGAACT 59.531 41.667 0.00 0.00 35.78 3.01
5350 5698 4.950050 AGTGAACTGACTGTTAGAGGTTG 58.050 43.478 6.59 0.00 39.30 3.77
5385 5733 1.742831 TCTGCGCAAATATTGTGGGTC 59.257 47.619 13.05 8.18 41.34 4.46
5386 5734 1.472082 CTGCGCAAATATTGTGGGTCA 59.528 47.619 13.05 10.74 41.34 4.02
5387 5735 1.472082 TGCGCAAATATTGTGGGTCAG 59.528 47.619 8.16 0.00 41.34 3.51
5388 5736 1.202290 GCGCAAATATTGTGGGTCAGG 60.202 52.381 0.30 0.00 41.34 3.86
5389 5737 1.202290 CGCAAATATTGTGGGTCAGGC 60.202 52.381 0.00 0.00 37.51 4.85
5390 5738 1.202290 GCAAATATTGTGGGTCAGGCG 60.202 52.381 0.00 0.00 0.00 5.52
5391 5739 1.405105 CAAATATTGTGGGTCAGGCGG 59.595 52.381 0.00 0.00 0.00 6.13
5392 5740 0.623723 AATATTGTGGGTCAGGCGGT 59.376 50.000 0.00 0.00 0.00 5.68
5414 5770 1.729881 GCCTTTTGCGGCTAGATGG 59.270 57.895 0.00 0.45 46.63 3.51
5422 5778 0.175760 GCGGCTAGATGGTCAGTGAA 59.824 55.000 0.00 0.00 0.00 3.18
5444 5800 2.742053 TGAAATTTGTAGGAGAGTGCGC 59.258 45.455 0.00 0.00 0.00 6.09
5446 5802 0.460284 ATTTGTAGGAGAGTGCGCGG 60.460 55.000 8.83 0.00 0.00 6.46
5453 5809 1.741770 GAGAGTGCGCGGAAATGGT 60.742 57.895 8.83 0.00 0.00 3.55
5475 5831 7.459795 GGTAGTACACCTTATATCCCTGTAC 57.540 44.000 2.06 0.00 44.79 2.90
5480 5836 8.407438 AGTACACCTTATATCCCTGTACCATAT 58.593 37.037 0.00 0.00 38.54 1.78
5481 5837 9.705103 GTACACCTTATATCCCTGTACCATATA 57.295 37.037 0.00 0.00 33.86 0.86
5482 5838 8.840200 ACACCTTATATCCCTGTACCATATAG 57.160 38.462 0.00 0.00 0.00 1.31
5483 5839 7.344871 ACACCTTATATCCCTGTACCATATAGC 59.655 40.741 0.00 0.00 0.00 2.97
5484 5840 7.565398 CACCTTATATCCCTGTACCATATAGCT 59.435 40.741 0.00 0.00 0.00 3.32
5485 5841 8.129656 ACCTTATATCCCTGTACCATATAGCTT 58.870 37.037 0.00 0.00 0.00 3.74
5486 5842 9.656323 CCTTATATCCCTGTACCATATAGCTTA 57.344 37.037 0.00 0.00 0.00 3.09
5493 5849 7.399191 TCCCTGTACCATATAGCTTACTTATGG 59.601 40.741 16.83 16.83 45.19 2.74
5588 5988 4.574674 ACCTCATTGGATAGAACTTGCA 57.425 40.909 0.00 0.00 39.71 4.08
5703 6107 8.555361 GTGAGAAAAAGGCTAGATGAATATGAC 58.445 37.037 0.00 0.00 0.00 3.06
5717 6121 0.909133 TATGACACAGGAGCTGCCCA 60.909 55.000 0.00 0.00 37.37 5.36
5852 6256 7.421599 CATTCAGTAATAGTCGATCACTCTGT 58.578 38.462 0.00 0.00 36.43 3.41
5894 6298 9.016438 ACGGGTGTGTAGTTTGAAAAATATTAT 57.984 29.630 0.00 0.00 0.00 1.28
5965 6369 3.866651 ACTTCATGTCAGGCATCAGTAC 58.133 45.455 0.00 0.00 35.19 2.73
5989 6393 5.106038 CCTGATGATTCTGCTGTTGCTTTAA 60.106 40.000 0.00 0.00 40.48 1.52
6017 6421 4.335735 TGGGGATGAAAATGGATTCTGT 57.664 40.909 0.00 0.00 0.00 3.41
6049 6453 4.580580 AGGACATGGAACTGAACTTTGTTC 59.419 41.667 0.00 3.74 41.08 3.18
6090 6494 4.009675 TCAATTTGTCGAATGAGAAGGGG 58.990 43.478 0.00 0.00 0.00 4.79
6117 6521 3.926058 ATTGACCCCGTAACAGCTAAT 57.074 42.857 0.00 0.00 0.00 1.73
6368 6790 1.322442 GCTGCTGAAAACTTCCCAGT 58.678 50.000 0.00 0.00 33.31 4.00
6456 6878 3.446161 AGATTGATGCAAACAGTGATGGG 59.554 43.478 0.00 0.00 0.00 4.00
6474 6896 1.398692 GGTTTGACACTCCCAAAGCA 58.601 50.000 11.40 0.00 45.78 3.91
6672 7094 2.288030 GGCTGATGCAATGGATACTTGC 60.288 50.000 0.00 5.45 45.20 4.01
6899 7326 8.560355 TTGACTGTGCACTTGTACATTTATAT 57.440 30.769 19.41 0.00 39.79 0.86
6951 7378 0.957362 TCCGTGTGCATGCAAATTCA 59.043 45.000 24.58 13.63 0.00 2.57
6954 7381 2.597520 CGTGTGCATGCAAATTCATGA 58.402 42.857 24.58 0.00 44.94 3.07
6955 7382 3.183754 CGTGTGCATGCAAATTCATGAT 58.816 40.909 24.58 0.00 44.94 2.45
6956 7383 3.615056 CGTGTGCATGCAAATTCATGATT 59.385 39.130 24.58 0.00 44.94 2.57
6957 7384 4.092237 CGTGTGCATGCAAATTCATGATTT 59.908 37.500 24.58 0.00 44.94 2.17
6990 7424 7.834181 GGCCTAATATATGATTTTGCTTCCCTA 59.166 37.037 0.00 0.00 0.00 3.53
6991 7425 9.243105 GCCTAATATATGATTTTGCTTCCCTAA 57.757 33.333 0.00 0.00 0.00 2.69
7032 7466 3.320359 GCCGGAGAGGGGATGAAA 58.680 61.111 5.05 0.00 41.48 2.69
7064 7498 3.447944 GTCTAAACTGACCTGTCCCTAGG 59.552 52.174 0.06 0.06 43.71 3.02
7569 8038 2.642254 CCCACCATTGCTGTGCCAG 61.642 63.158 0.00 0.00 32.30 4.85
7608 8077 3.958860 CTCCCCCGGCCATGGATC 61.959 72.222 18.40 5.62 0.00 3.36
7609 8078 4.514594 TCCCCCGGCCATGGATCT 62.515 66.667 18.40 0.00 0.00 2.75
7610 8079 4.275508 CCCCCGGCCATGGATCTG 62.276 72.222 18.40 3.22 0.00 2.90
7611 8080 4.275508 CCCCGGCCATGGATCTGG 62.276 72.222 18.40 13.19 39.45 3.86
7617 8086 2.593725 CCATGGATCTGGCGCTGG 60.594 66.667 5.56 0.00 0.00 4.85
7618 8087 2.507452 CATGGATCTGGCGCTGGA 59.493 61.111 7.64 6.31 0.00 3.86
7619 8088 1.597302 CATGGATCTGGCGCTGGAG 60.597 63.158 7.64 0.78 0.00 3.86
7620 8089 2.815945 ATGGATCTGGCGCTGGAGG 61.816 63.158 7.64 0.00 0.00 4.30
7621 8090 3.157252 GGATCTGGCGCTGGAGGA 61.157 66.667 7.64 0.00 0.00 3.71
7622 8091 2.107953 GATCTGGCGCTGGAGGAC 59.892 66.667 7.64 0.00 0.00 3.85
7623 8092 2.685017 ATCTGGCGCTGGAGGACA 60.685 61.111 7.64 0.00 0.00 4.02
7624 8093 2.914777 GATCTGGCGCTGGAGGACAC 62.915 65.000 7.64 0.00 0.00 3.67
7625 8094 4.767255 CTGGCGCTGGAGGACACC 62.767 72.222 7.64 0.00 0.00 4.16
7627 8096 4.101448 GGCGCTGGAGGACACCAT 62.101 66.667 7.64 0.00 39.34 3.55
7628 8097 2.821366 GCGCTGGAGGACACCATG 60.821 66.667 0.00 0.00 39.34 3.66
7629 8098 2.665000 CGCTGGAGGACACCATGT 59.335 61.111 0.00 0.00 39.34 3.21
7630 8099 1.897423 CGCTGGAGGACACCATGTA 59.103 57.895 0.00 0.00 39.34 2.29
7631 8100 0.460284 CGCTGGAGGACACCATGTAC 60.460 60.000 0.00 0.00 39.34 2.90
7632 8101 0.460284 GCTGGAGGACACCATGTACG 60.460 60.000 0.00 0.00 36.00 3.67
7633 8102 0.460284 CTGGAGGACACCATGTACGC 60.460 60.000 0.00 0.00 36.00 4.42
7634 8103 1.518572 GGAGGACACCATGTACGCG 60.519 63.158 3.53 3.53 36.00 6.01
7635 8104 2.125673 AGGACACCATGTACGCGC 60.126 61.111 5.73 0.00 36.00 6.86
7636 8105 2.125673 GGACACCATGTACGCGCT 60.126 61.111 5.73 0.00 0.00 5.92
7637 8106 2.452813 GGACACCATGTACGCGCTG 61.453 63.158 5.73 1.02 0.00 5.18
7638 8107 2.434185 ACACCATGTACGCGCTGG 60.434 61.111 5.73 10.82 36.09 4.85
7639 8108 2.125713 CACCATGTACGCGCTGGA 60.126 61.111 18.50 0.00 34.08 3.86
7640 8109 2.125673 ACCATGTACGCGCTGGAC 60.126 61.111 18.50 12.91 34.08 4.02
7644 8113 3.411418 ATGTACGCGCTGGACGAGG 62.411 63.158 5.73 0.00 46.87 4.63
7661 8130 3.064324 GCGGTGCAGCAAGGGATT 61.064 61.111 17.33 0.00 37.05 3.01
7662 8131 2.879907 CGGTGCAGCAAGGGATTG 59.120 61.111 17.33 0.00 0.00 2.67
7663 8132 1.973281 CGGTGCAGCAAGGGATTGT 60.973 57.895 17.33 0.00 0.00 2.71
7664 8133 1.588082 GGTGCAGCAAGGGATTGTG 59.412 57.895 11.86 0.00 0.00 3.33
7665 8134 1.080298 GTGCAGCAAGGGATTGTGC 60.080 57.895 0.00 7.92 41.22 4.57
7666 8135 2.277591 TGCAGCAAGGGATTGTGCC 61.278 57.895 0.00 0.00 41.88 5.01
7667 8136 2.879907 CAGCAAGGGATTGTGCCG 59.120 61.111 0.00 0.00 41.88 5.69
7668 8137 1.973281 CAGCAAGGGATTGTGCCGT 60.973 57.895 0.00 0.00 41.88 5.68
7669 8138 1.228552 AGCAAGGGATTGTGCCGTT 60.229 52.632 0.00 0.00 41.88 4.44
7670 8139 1.212751 GCAAGGGATTGTGCCGTTC 59.787 57.895 0.00 0.00 34.03 3.95
7671 8140 1.523154 GCAAGGGATTGTGCCGTTCA 61.523 55.000 0.00 0.00 34.03 3.18
7672 8141 0.523072 CAAGGGATTGTGCCGTTCAG 59.477 55.000 0.00 0.00 34.03 3.02
7673 8142 1.244019 AAGGGATTGTGCCGTTCAGC 61.244 55.000 0.00 0.00 30.70 4.26
7674 8143 2.480555 GGATTGTGCCGTTCAGCG 59.519 61.111 0.00 0.00 40.95 5.18
7683 8152 2.202756 CGTTCAGCGGCTACCTCC 60.203 66.667 0.26 0.00 36.85 4.30
7691 8160 4.208686 GGCTACCTCCGGAGCGTG 62.209 72.222 26.87 15.15 39.72 5.34
7692 8161 4.874977 GCTACCTCCGGAGCGTGC 62.875 72.222 26.87 22.53 0.00 5.34
7693 8162 4.554363 CTACCTCCGGAGCGTGCG 62.554 72.222 26.87 14.37 0.00 5.34
7711 8180 3.468007 CGCGAGCAGTTCTTCCAG 58.532 61.111 0.00 0.00 0.00 3.86
7712 8181 2.734673 CGCGAGCAGTTCTTCCAGC 61.735 63.158 0.00 0.00 0.00 4.85
7713 8182 2.734673 GCGAGCAGTTCTTCCAGCG 61.735 63.158 0.00 0.00 0.00 5.18
7714 8183 1.373497 CGAGCAGTTCTTCCAGCGT 60.373 57.895 0.00 0.00 0.00 5.07
7715 8184 1.621301 CGAGCAGTTCTTCCAGCGTG 61.621 60.000 0.00 0.00 0.00 5.34
7716 8185 1.905922 GAGCAGTTCTTCCAGCGTGC 61.906 60.000 0.00 0.00 0.00 5.34
7717 8186 2.253758 GCAGTTCTTCCAGCGTGCA 61.254 57.895 0.00 0.00 0.00 4.57
7718 8187 1.571460 CAGTTCTTCCAGCGTGCAC 59.429 57.895 6.82 6.82 0.00 4.57
7719 8188 0.882042 CAGTTCTTCCAGCGTGCACT 60.882 55.000 16.19 0.00 0.00 4.40
7720 8189 0.601311 AGTTCTTCCAGCGTGCACTC 60.601 55.000 16.19 7.07 0.00 3.51
7721 8190 0.601311 GTTCTTCCAGCGTGCACTCT 60.601 55.000 16.19 9.86 0.00 3.24
7722 8191 0.601046 TTCTTCCAGCGTGCACTCTG 60.601 55.000 26.36 26.36 0.00 3.35
7723 8192 2.666190 TTCCAGCGTGCACTCTGC 60.666 61.111 27.59 17.85 45.29 4.26
7732 8201 3.034030 GCACTCTGCGCCAAACTT 58.966 55.556 4.18 0.00 31.71 2.66
7733 8202 1.360192 GCACTCTGCGCCAAACTTT 59.640 52.632 4.18 0.00 31.71 2.66
7734 8203 0.936297 GCACTCTGCGCCAAACTTTG 60.936 55.000 4.18 0.00 31.71 2.77
7735 8204 0.936297 CACTCTGCGCCAAACTTTGC 60.936 55.000 4.18 0.00 0.00 3.68
7736 8205 1.103398 ACTCTGCGCCAAACTTTGCT 61.103 50.000 4.18 0.00 0.00 3.91
7737 8206 0.874390 CTCTGCGCCAAACTTTGCTA 59.126 50.000 4.18 0.00 0.00 3.49
7738 8207 0.874390 TCTGCGCCAAACTTTGCTAG 59.126 50.000 4.18 0.00 0.00 3.42
7739 8208 0.730494 CTGCGCCAAACTTTGCTAGC 60.730 55.000 8.10 8.10 0.00 3.42
7740 8209 1.172180 TGCGCCAAACTTTGCTAGCT 61.172 50.000 17.23 0.00 0.00 3.32
7741 8210 0.455126 GCGCCAAACTTTGCTAGCTC 60.455 55.000 17.23 0.00 0.00 4.09
7742 8211 0.169009 CGCCAAACTTTGCTAGCTCC 59.831 55.000 17.23 0.00 0.00 4.70
7743 8212 0.528017 GCCAAACTTTGCTAGCTCCC 59.472 55.000 17.23 0.00 0.00 4.30
7744 8213 1.909700 CCAAACTTTGCTAGCTCCCA 58.090 50.000 17.23 0.00 0.00 4.37
7745 8214 2.450476 CCAAACTTTGCTAGCTCCCAT 58.550 47.619 17.23 0.00 0.00 4.00
7746 8215 2.165030 CCAAACTTTGCTAGCTCCCATG 59.835 50.000 17.23 7.98 0.00 3.66
7747 8216 3.084039 CAAACTTTGCTAGCTCCCATGA 58.916 45.455 17.23 0.00 0.00 3.07
7748 8217 2.706339 ACTTTGCTAGCTCCCATGAG 57.294 50.000 17.23 5.76 41.84 2.90
7759 8228 3.293311 CTCCCATGAGCTGTTGTTTTG 57.707 47.619 0.00 0.00 0.00 2.44
7760 8229 1.962807 TCCCATGAGCTGTTGTTTTGG 59.037 47.619 0.00 0.00 0.00 3.28
7761 8230 1.688197 CCCATGAGCTGTTGTTTTGGT 59.312 47.619 0.00 0.00 0.00 3.67
7762 8231 2.890311 CCCATGAGCTGTTGTTTTGGTA 59.110 45.455 0.00 0.00 0.00 3.25
7763 8232 3.511146 CCCATGAGCTGTTGTTTTGGTAT 59.489 43.478 0.00 0.00 0.00 2.73
7764 8233 4.021192 CCCATGAGCTGTTGTTTTGGTATT 60.021 41.667 0.00 0.00 0.00 1.89
7765 8234 4.925054 CCATGAGCTGTTGTTTTGGTATTG 59.075 41.667 0.00 0.00 0.00 1.90
7766 8235 3.976169 TGAGCTGTTGTTTTGGTATTGC 58.024 40.909 0.00 0.00 0.00 3.56
7767 8236 3.382865 TGAGCTGTTGTTTTGGTATTGCA 59.617 39.130 0.00 0.00 0.00 4.08
7768 8237 4.039004 TGAGCTGTTGTTTTGGTATTGCAT 59.961 37.500 0.00 0.00 0.00 3.96
7769 8238 4.559153 AGCTGTTGTTTTGGTATTGCATC 58.441 39.130 0.00 0.00 0.00 3.91
7770 8239 4.039004 AGCTGTTGTTTTGGTATTGCATCA 59.961 37.500 0.00 0.00 0.00 3.07
7771 8240 4.386652 GCTGTTGTTTTGGTATTGCATCAG 59.613 41.667 0.00 0.00 32.90 2.90
7772 8241 4.305769 TGTTGTTTTGGTATTGCATCAGC 58.694 39.130 0.00 0.00 42.57 4.26
7773 8242 4.039004 TGTTGTTTTGGTATTGCATCAGCT 59.961 37.500 0.00 0.00 42.74 4.24
7774 8243 4.439305 TGTTTTGGTATTGCATCAGCTC 57.561 40.909 0.00 0.00 42.74 4.09
7775 8244 3.825585 TGTTTTGGTATTGCATCAGCTCA 59.174 39.130 0.00 0.00 42.74 4.26
7776 8245 4.168760 GTTTTGGTATTGCATCAGCTCAC 58.831 43.478 0.00 0.00 42.74 3.51
7777 8246 2.785540 TGGTATTGCATCAGCTCACA 57.214 45.000 0.00 0.00 42.74 3.58
7778 8247 2.358957 TGGTATTGCATCAGCTCACAC 58.641 47.619 0.00 0.00 42.74 3.82
7779 8248 2.026915 TGGTATTGCATCAGCTCACACT 60.027 45.455 0.00 0.00 42.74 3.55
7780 8249 3.197549 TGGTATTGCATCAGCTCACACTA 59.802 43.478 0.00 0.00 42.74 2.74
7781 8250 3.557595 GGTATTGCATCAGCTCACACTAC 59.442 47.826 0.00 0.00 42.74 2.73
7782 8251 2.099141 TTGCATCAGCTCACACTACC 57.901 50.000 0.00 0.00 42.74 3.18
7783 8252 0.975887 TGCATCAGCTCACACTACCA 59.024 50.000 0.00 0.00 42.74 3.25
7784 8253 1.347378 TGCATCAGCTCACACTACCAA 59.653 47.619 0.00 0.00 42.74 3.67
7785 8254 2.026915 TGCATCAGCTCACACTACCAAT 60.027 45.455 0.00 0.00 42.74 3.16
7786 8255 2.353889 GCATCAGCTCACACTACCAATG 59.646 50.000 0.00 0.00 37.91 2.82
7787 8256 2.099141 TCAGCTCACACTACCAATGC 57.901 50.000 0.00 0.00 0.00 3.56
7788 8257 1.089920 CAGCTCACACTACCAATGCC 58.910 55.000 0.00 0.00 0.00 4.40
7789 8258 0.692476 AGCTCACACTACCAATGCCA 59.308 50.000 0.00 0.00 0.00 4.92
7790 8259 1.089920 GCTCACACTACCAATGCCAG 58.910 55.000 0.00 0.00 0.00 4.85
7791 8260 1.089920 CTCACACTACCAATGCCAGC 58.910 55.000 0.00 0.00 0.00 4.85
7792 8261 0.399833 TCACACTACCAATGCCAGCA 59.600 50.000 0.00 0.00 0.00 4.41
7793 8262 0.806868 CACACTACCAATGCCAGCAG 59.193 55.000 0.00 0.00 0.00 4.24
7794 8263 0.962356 ACACTACCAATGCCAGCAGC 60.962 55.000 0.00 0.00 44.14 5.25
7795 8264 0.679002 CACTACCAATGCCAGCAGCT 60.679 55.000 0.00 0.00 44.23 4.24
7796 8265 0.911769 ACTACCAATGCCAGCAGCTA 59.088 50.000 0.00 0.00 44.23 3.32
7797 8266 1.303309 CTACCAATGCCAGCAGCTAC 58.697 55.000 0.00 0.00 44.23 3.58
7798 8267 0.911769 TACCAATGCCAGCAGCTACT 59.088 50.000 0.00 0.00 44.23 2.57
7799 8268 0.679002 ACCAATGCCAGCAGCTACTG 60.679 55.000 7.00 7.00 44.23 2.74
7810 8279 1.436600 CAGCTACTGCAGTTCACTGG 58.563 55.000 27.06 9.57 43.94 4.00
7811 8280 1.051812 AGCTACTGCAGTTCACTGGT 58.948 50.000 27.06 12.67 43.94 4.00
7812 8281 1.151668 GCTACTGCAGTTCACTGGTG 58.848 55.000 27.06 6.56 43.94 4.17
7813 8282 1.541233 GCTACTGCAGTTCACTGGTGT 60.541 52.381 27.06 0.00 43.94 4.16
7814 8283 2.138320 CTACTGCAGTTCACTGGTGTG 58.862 52.381 27.06 0.00 43.94 3.82
7815 8284 0.253044 ACTGCAGTTCACTGGTGTGT 59.747 50.000 15.25 0.00 43.94 3.72
7816 8285 0.659427 CTGCAGTTCACTGGTGTGTG 59.341 55.000 5.25 0.00 43.94 3.82
7817 8286 0.747644 TGCAGTTCACTGGTGTGTGG 60.748 55.000 9.01 0.00 43.94 4.17
7818 8287 0.748005 GCAGTTCACTGGTGTGTGGT 60.748 55.000 9.01 0.00 43.94 4.16
7819 8288 1.016627 CAGTTCACTGGTGTGTGGTG 58.983 55.000 0.00 0.00 44.14 4.17
7820 8289 0.618458 AGTTCACTGGTGTGTGGTGT 59.382 50.000 0.53 0.00 44.14 4.16
7821 8290 0.732571 GTTCACTGGTGTGTGGTGTG 59.267 55.000 0.53 0.00 44.14 3.82
7822 8291 1.029408 TTCACTGGTGTGTGGTGTGC 61.029 55.000 0.53 0.00 44.14 4.57
7823 8292 1.748500 CACTGGTGTGTGGTGTGCA 60.749 57.895 0.00 0.00 39.24 4.57
7824 8293 1.451927 ACTGGTGTGTGGTGTGCAG 60.452 57.895 0.00 0.00 0.00 4.41
7825 8294 1.451927 CTGGTGTGTGGTGTGCAGT 60.452 57.895 0.00 0.00 0.00 4.40
7826 8295 1.001517 TGGTGTGTGGTGTGCAGTT 60.002 52.632 0.00 0.00 0.00 3.16
7827 8296 1.029408 TGGTGTGTGGTGTGCAGTTC 61.029 55.000 0.00 0.00 0.00 3.01
7828 8297 1.351707 GTGTGTGGTGTGCAGTTCG 59.648 57.895 0.00 0.00 0.00 3.95
7829 8298 1.817520 TGTGTGGTGTGCAGTTCGG 60.818 57.895 0.00 0.00 0.00 4.30
7830 8299 2.899838 TGTGGTGTGCAGTTCGGC 60.900 61.111 0.00 0.00 0.00 5.54
7831 8300 2.591715 GTGGTGTGCAGTTCGGCT 60.592 61.111 0.00 0.00 34.04 5.52
7832 8301 1.301401 GTGGTGTGCAGTTCGGCTA 60.301 57.895 0.00 0.00 34.04 3.93
7833 8302 1.301401 TGGTGTGCAGTTCGGCTAC 60.301 57.895 0.00 0.00 34.04 3.58
7834 8303 1.004918 GGTGTGCAGTTCGGCTACT 60.005 57.895 0.00 0.00 34.04 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.909610 GCCCGATGAAAATCTTATCTTTTCG 59.090 40.000 0.00 0.00 42.72 3.46
1 2 6.795399 TGCCCGATGAAAATCTTATCTTTTC 58.205 36.000 0.00 0.00 41.07 2.29
2 3 6.773976 TGCCCGATGAAAATCTTATCTTTT 57.226 33.333 0.00 0.00 0.00 2.27
17 18 1.102154 TTGCCAATACTTGCCCGATG 58.898 50.000 0.00 0.00 0.00 3.84
20 21 1.102154 TCATTGCCAATACTTGCCCG 58.898 50.000 0.00 0.00 0.00 6.13
31 32 3.065233 GTCGTTGCTATTGATCATTGCCA 59.935 43.478 0.00 0.00 33.03 4.92
33 34 3.621794 GGTCGTTGCTATTGATCATTGC 58.378 45.455 0.00 2.11 34.47 3.56
38 39 1.859080 GGACGGTCGTTGCTATTGATC 59.141 52.381 1.43 0.00 0.00 2.92
108 110 0.792640 CTGAAAACTGATCGCTGCGT 59.207 50.000 22.48 9.40 0.00 5.24
131 133 1.480545 AGCGGAACAAAAGGCAAACTT 59.519 42.857 0.00 0.00 42.52 2.66
158 169 7.327761 TCCTCGAGTTAGAAATTACAAGAAACG 59.672 37.037 12.31 0.00 0.00 3.60
165 176 7.417570 GGAAGGATCCTCGAGTTAGAAATTACA 60.418 40.741 16.52 0.00 42.93 2.41
183 194 4.195416 GTTCAGAGTCAATGGGAAGGATC 58.805 47.826 0.00 0.00 0.00 3.36
184 195 3.369892 CGTTCAGAGTCAATGGGAAGGAT 60.370 47.826 0.00 0.00 0.00 3.24
187 198 2.996621 GTCGTTCAGAGTCAATGGGAAG 59.003 50.000 0.00 0.00 0.00 3.46
188 199 2.289444 GGTCGTTCAGAGTCAATGGGAA 60.289 50.000 0.00 0.00 0.00 3.97
189 200 1.275291 GGTCGTTCAGAGTCAATGGGA 59.725 52.381 0.00 0.00 0.00 4.37
191 202 1.067846 TCGGTCGTTCAGAGTCAATGG 60.068 52.381 0.00 0.00 0.00 3.16
192 203 1.986378 GTCGGTCGTTCAGAGTCAATG 59.014 52.381 0.00 0.00 0.00 2.82
193 204 1.067776 GGTCGGTCGTTCAGAGTCAAT 60.068 52.381 0.00 0.00 0.00 2.57
194 205 0.313043 GGTCGGTCGTTCAGAGTCAA 59.687 55.000 0.00 0.00 0.00 3.18
195 206 0.820482 TGGTCGGTCGTTCAGAGTCA 60.820 55.000 0.00 0.00 0.00 3.41
196 207 0.386985 GTGGTCGGTCGTTCAGAGTC 60.387 60.000 0.00 0.00 0.00 3.36
197 208 1.658673 GTGGTCGGTCGTTCAGAGT 59.341 57.895 0.00 0.00 0.00 3.24
199 210 2.640989 CGTGGTCGGTCGTTCAGA 59.359 61.111 0.00 0.00 0.00 3.27
215 226 1.070175 CAACAGCTTTTCCACGTACCG 60.070 52.381 0.00 0.00 0.00 4.02
216 227 2.215196 TCAACAGCTTTTCCACGTACC 58.785 47.619 0.00 0.00 0.00 3.34
217 228 4.449743 TGTATCAACAGCTTTTCCACGTAC 59.550 41.667 0.00 0.00 0.00 3.67
232 243 3.608506 CACGTGCAGAGTACTGTATCAAC 59.391 47.826 0.82 0.00 45.04 3.18
249 260 2.268298 GGGTTATAGAGTGCACACGTG 58.732 52.381 21.04 15.48 36.20 4.49
250 261 1.897133 TGGGTTATAGAGTGCACACGT 59.103 47.619 21.04 9.83 36.20 4.49
251 262 2.268298 GTGGGTTATAGAGTGCACACG 58.732 52.381 21.04 0.00 36.20 4.49
253 264 1.206132 CCGTGGGTTATAGAGTGCACA 59.794 52.381 21.04 0.00 0.00 4.57
254 265 1.206371 ACCGTGGGTTATAGAGTGCAC 59.794 52.381 9.40 9.40 27.29 4.57
255 266 1.563924 ACCGTGGGTTATAGAGTGCA 58.436 50.000 0.00 0.00 27.29 4.57
256 267 3.806625 TTACCGTGGGTTATAGAGTGC 57.193 47.619 0.00 0.00 37.09 4.40
282 293 6.875076 ACTATTAGCTTATTGTCGGTGTCTT 58.125 36.000 0.00 0.00 0.00 3.01
283 294 6.466885 ACTATTAGCTTATTGTCGGTGTCT 57.533 37.500 0.00 0.00 0.00 3.41
284 295 6.509677 GCAACTATTAGCTTATTGTCGGTGTC 60.510 42.308 0.00 0.00 0.00 3.67
326 347 9.334947 ACTCGAGATTGATTTGATTGTATGATT 57.665 29.630 21.68 0.00 0.00 2.57
327 348 8.899427 ACTCGAGATTGATTTGATTGTATGAT 57.101 30.769 21.68 0.00 0.00 2.45
328 349 9.249457 GTACTCGAGATTGATTTGATTGTATGA 57.751 33.333 21.68 0.00 0.00 2.15
329 350 9.034544 TGTACTCGAGATTGATTTGATTGTATG 57.965 33.333 21.68 0.00 0.00 2.39
330 351 9.599866 TTGTACTCGAGATTGATTTGATTGTAT 57.400 29.630 21.68 0.00 0.00 2.29
331 352 8.996024 TTGTACTCGAGATTGATTTGATTGTA 57.004 30.769 21.68 0.00 0.00 2.41
344 365 4.611943 CGTGATCCATTTGTACTCGAGAT 58.388 43.478 21.68 6.08 0.00 2.75
345 366 3.733988 GCGTGATCCATTTGTACTCGAGA 60.734 47.826 21.68 0.00 0.00 4.04
368 389 7.042051 GCTAGCAATTCTCGTTCCATTTATGTA 60.042 37.037 10.63 0.00 0.00 2.29
378 399 3.244111 GCTACTGCTAGCAATTCTCGTTC 59.756 47.826 19.86 4.19 44.45 3.95
393 414 3.368236 GCTTAACACACACTAGCTACTGC 59.632 47.826 0.00 0.00 40.05 4.40
394 415 4.556233 TGCTTAACACACACTAGCTACTG 58.444 43.478 0.00 0.00 33.15 2.74
395 416 4.866508 TGCTTAACACACACTAGCTACT 57.133 40.909 0.00 0.00 33.15 2.57
396 417 4.143094 GCTTGCTTAACACACACTAGCTAC 60.143 45.833 0.00 0.00 33.15 3.58
422 443 6.363357 GGTTTGTGGTTAGTTACTACGTACTG 59.637 42.308 0.00 0.00 40.83 2.74
423 444 6.040391 TGGTTTGTGGTTAGTTACTACGTACT 59.960 38.462 0.00 0.00 40.83 2.73
424 445 6.212955 TGGTTTGTGGTTAGTTACTACGTAC 58.787 40.000 0.00 0.00 40.83 3.67
425 446 6.398234 TGGTTTGTGGTTAGTTACTACGTA 57.602 37.500 0.00 0.00 40.83 3.57
428 449 4.453478 GCCTGGTTTGTGGTTAGTTACTAC 59.547 45.833 0.00 0.00 38.61 2.73
429 450 4.102838 TGCCTGGTTTGTGGTTAGTTACTA 59.897 41.667 0.00 0.00 0.00 1.82
430 451 3.117813 TGCCTGGTTTGTGGTTAGTTACT 60.118 43.478 0.00 0.00 0.00 2.24
431 452 3.004002 GTGCCTGGTTTGTGGTTAGTTAC 59.996 47.826 0.00 0.00 0.00 2.50
432 453 3.215975 GTGCCTGGTTTGTGGTTAGTTA 58.784 45.455 0.00 0.00 0.00 2.24
435 456 0.958822 GGTGCCTGGTTTGTGGTTAG 59.041 55.000 0.00 0.00 0.00 2.34
437 458 1.760480 GGGTGCCTGGTTTGTGGTT 60.760 57.895 0.00 0.00 0.00 3.67
438 459 2.123468 GGGTGCCTGGTTTGTGGT 60.123 61.111 0.00 0.00 0.00 4.16
440 461 2.917227 GGGGGTGCCTGGTTTGTG 60.917 66.667 0.00 0.00 0.00 3.33
441 462 3.110031 AGGGGGTGCCTGGTTTGT 61.110 61.111 0.00 0.00 0.00 2.83
442 463 2.601367 CAGGGGGTGCCTGGTTTG 60.601 66.667 0.00 0.00 0.00 2.93
452 473 4.548513 TTTTTGCGGGCAGGGGGT 62.549 61.111 0.00 0.00 0.00 4.95
466 487 3.605634 GGTGCCTGGTGTTTTTCTTTTT 58.394 40.909 0.00 0.00 0.00 1.94
467 488 2.093181 GGGTGCCTGGTGTTTTTCTTTT 60.093 45.455 0.00 0.00 0.00 2.27
468 489 1.484653 GGGTGCCTGGTGTTTTTCTTT 59.515 47.619 0.00 0.00 0.00 2.52
469 490 1.119684 GGGTGCCTGGTGTTTTTCTT 58.880 50.000 0.00 0.00 0.00 2.52
470 491 0.759060 GGGGTGCCTGGTGTTTTTCT 60.759 55.000 0.00 0.00 0.00 2.52
471 492 1.745890 GGGGTGCCTGGTGTTTTTC 59.254 57.895 0.00 0.00 0.00 2.29
472 493 1.764454 GGGGGTGCCTGGTGTTTTT 60.764 57.895 0.00 0.00 0.00 1.94
473 494 1.365105 TAGGGGGTGCCTGGTGTTTT 61.365 55.000 0.00 0.00 0.00 2.43
474 495 1.776710 TAGGGGGTGCCTGGTGTTT 60.777 57.895 0.00 0.00 0.00 2.83
475 496 2.121689 TAGGGGGTGCCTGGTGTT 60.122 61.111 0.00 0.00 0.00 3.32
476 497 2.610859 CTAGGGGGTGCCTGGTGT 60.611 66.667 0.00 0.00 0.00 4.16
477 498 4.115199 GCTAGGGGGTGCCTGGTG 62.115 72.222 0.00 0.00 0.00 4.17
478 499 4.675303 TGCTAGGGGGTGCCTGGT 62.675 66.667 0.00 0.00 0.00 4.00
479 500 2.228841 AATTGCTAGGGGGTGCCTGG 62.229 60.000 0.00 0.00 0.00 4.45
480 501 0.753111 GAATTGCTAGGGGGTGCCTG 60.753 60.000 0.00 0.00 0.00 4.85
481 502 1.615262 GAATTGCTAGGGGGTGCCT 59.385 57.895 0.00 0.00 0.00 4.75
482 503 1.823899 CGAATTGCTAGGGGGTGCC 60.824 63.158 0.00 0.00 0.00 5.01
483 504 2.481471 GCGAATTGCTAGGGGGTGC 61.481 63.158 0.00 0.00 41.73 5.01
484 505 1.823899 GGCGAATTGCTAGGGGGTG 60.824 63.158 0.00 0.00 45.43 4.61
485 506 2.595655 GGCGAATTGCTAGGGGGT 59.404 61.111 0.00 0.00 45.43 4.95
486 507 2.591715 CGGCGAATTGCTAGGGGG 60.592 66.667 0.00 0.00 45.43 5.40
517 538 0.457035 TTCGGAGGTTTCCCGTATCG 59.543 55.000 0.00 0.00 46.53 2.92
591 612 1.202313 CCCGTTGCGTTGAAGGAAAAA 60.202 47.619 0.00 0.00 0.00 1.94
658 691 4.410033 GGGGGAGACGAAGGGGGA 62.410 72.222 0.00 0.00 0.00 4.81
815 964 0.179023 GGAGGATCGAGTAGTCGGGT 60.179 60.000 19.43 9.07 46.80 5.28
841 990 0.037734 GAAAACCACCAGATCGGGGT 59.962 55.000 16.73 11.34 39.33 4.95
846 995 0.037734 ACCGGGAAAACCACCAGATC 59.962 55.000 6.32 0.00 40.22 2.75
847 996 0.481128 AACCGGGAAAACCACCAGAT 59.519 50.000 6.32 0.00 40.22 2.90
848 997 0.179012 GAACCGGGAAAACCACCAGA 60.179 55.000 6.32 0.00 40.22 3.86
850 999 1.526455 CGAACCGGGAAAACCACCA 60.526 57.895 6.32 0.00 40.22 4.17
852 1001 1.650363 CACGAACCGGGAAAACCAC 59.350 57.895 6.32 0.00 40.22 4.16
854 1003 2.640989 GCACGAACCGGGAAAACC 59.359 61.111 6.32 0.00 28.17 3.27
855 1004 2.250190 CGCACGAACCGGGAAAAC 59.750 61.111 6.32 0.00 28.17 2.43
856 1005 3.652000 GCGCACGAACCGGGAAAA 61.652 61.111 6.32 0.00 28.17 2.29
935 1092 0.877071 CAACGCCAGCATCAGAAACT 59.123 50.000 0.00 0.00 0.00 2.66
950 1107 0.029300 CTGAAACCACCACAGCAACG 59.971 55.000 0.00 0.00 0.00 4.10
960 1117 4.025401 CACGCCGCCTGAAACCAC 62.025 66.667 0.00 0.00 0.00 4.16
1177 1337 1.227764 TCCGAGATAGGTCGACGGG 60.228 63.158 9.92 2.22 43.67 5.28
1185 1345 1.686355 ACAGCAGAGTCCGAGATAGG 58.314 55.000 0.00 0.00 0.00 2.57
1188 1348 0.453793 CGAACAGCAGAGTCCGAGAT 59.546 55.000 0.00 0.00 0.00 2.75
1330 1495 1.154093 CTGCTGCGCCATTTCAGTG 60.154 57.895 4.18 0.00 33.09 3.66
1411 1576 2.683859 CGGCCATCACACTGCACAG 61.684 63.158 2.24 0.00 0.00 3.66
1451 1616 4.395854 TCCACATGCTGATTGTAATCACAC 59.604 41.667 3.28 0.71 40.32 3.82
1454 1619 6.377712 TGATTTCCACATGCTGATTGTAATCA 59.622 34.615 7.06 7.06 42.78 2.57
1456 1621 6.379133 ACTGATTTCCACATGCTGATTGTAAT 59.621 34.615 0.00 0.00 0.00 1.89
1478 1644 3.496884 TCGAAATCAAAAACCCGAGACTG 59.503 43.478 0.00 0.00 0.00 3.51
1485 1651 7.328493 CCATTAGTTTCTCGAAATCAAAAACCC 59.672 37.037 0.00 0.00 31.73 4.11
1487 1653 8.690840 CACCATTAGTTTCTCGAAATCAAAAAC 58.309 33.333 0.00 0.00 32.36 2.43
1507 1673 6.544931 CCAATACAGATGATCTCAACACCATT 59.455 38.462 0.00 0.00 0.00 3.16
1536 1702 0.821711 TAAGCCCCACACACAGCAAC 60.822 55.000 0.00 0.00 0.00 4.17
1537 1703 0.537143 CTAAGCCCCACACACAGCAA 60.537 55.000 0.00 0.00 0.00 3.91
1560 1726 5.957842 TTGCACATTTCCCTAACAGTTAG 57.042 39.130 12.84 12.84 0.00 2.34
1562 1728 5.806654 AATTGCACATTTCCCTAACAGTT 57.193 34.783 0.00 0.00 0.00 3.16
1576 1742 1.268999 GGCACTCAACGAAATTGCACA 60.269 47.619 0.00 0.00 38.29 4.57
1755 1921 3.052745 GGCAGCAGAAGTTAAGCAAAAC 58.947 45.455 0.00 0.00 0.00 2.43
1772 1938 6.690194 AAAGCATACTGATTTCTAAGGCAG 57.310 37.500 0.00 0.00 28.78 4.85
1794 1960 1.211703 TCACTGTGCCTCAACCAAGAA 59.788 47.619 2.12 0.00 0.00 2.52
1815 1981 1.694150 AGTAGCACTGAGAAGCAACCA 59.306 47.619 4.71 0.00 0.00 3.67
1831 1997 5.124457 CACCACTTCCATTCATTCCAAGTAG 59.876 44.000 0.00 0.00 0.00 2.57
1833 1999 3.828451 CACCACTTCCATTCATTCCAAGT 59.172 43.478 0.00 0.00 0.00 3.16
1876 2042 4.864247 GGACCAAAACATGTGCACATAATC 59.136 41.667 30.92 18.45 34.26 1.75
1902 2068 9.784680 ACGTATAGTGAGTTAGTTGAAACATAG 57.215 33.333 0.00 0.00 0.00 2.23
1913 2079 6.715344 TTGGCAAAACGTATAGTGAGTTAG 57.285 37.500 0.00 0.00 0.00 2.34
1987 2153 7.681065 GCACTAACAAACTTGGTTGACAACTAT 60.681 37.037 17.52 0.00 34.76 2.12
2008 2174 7.744087 ATTTCATCTAACAAACACAGCACTA 57.256 32.000 0.00 0.00 0.00 2.74
2084 2250 3.508744 AGCTTAAATTGGCATGTTCCG 57.491 42.857 0.00 0.00 0.00 4.30
2100 2272 8.540507 TCCTAAGTACTCATCTTGATAAGCTT 57.459 34.615 3.48 3.48 0.00 3.74
2116 2288 7.617041 TCCTAACTTCGTAACTCCTAAGTAC 57.383 40.000 0.00 0.00 33.48 2.73
2120 2292 8.579850 TTGTATCCTAACTTCGTAACTCCTAA 57.420 34.615 0.00 0.00 0.00 2.69
2121 2293 8.579850 TTTGTATCCTAACTTCGTAACTCCTA 57.420 34.615 0.00 0.00 0.00 2.94
2122 2294 7.472334 TTTGTATCCTAACTTCGTAACTCCT 57.528 36.000 0.00 0.00 0.00 3.69
2123 2295 7.816513 ACTTTTGTATCCTAACTTCGTAACTCC 59.183 37.037 0.00 0.00 0.00 3.85
2124 2296 8.754230 ACTTTTGTATCCTAACTTCGTAACTC 57.246 34.615 0.00 0.00 0.00 3.01
2125 2297 9.201127 GAACTTTTGTATCCTAACTTCGTAACT 57.799 33.333 0.00 0.00 0.00 2.24
2126 2298 8.981647 TGAACTTTTGTATCCTAACTTCGTAAC 58.018 33.333 0.00 0.00 0.00 2.50
2127 2299 9.715121 ATGAACTTTTGTATCCTAACTTCGTAA 57.285 29.630 0.00 0.00 0.00 3.18
2128 2300 9.362539 GATGAACTTTTGTATCCTAACTTCGTA 57.637 33.333 0.00 0.00 0.00 3.43
2129 2301 7.333672 GGATGAACTTTTGTATCCTAACTTCGT 59.666 37.037 0.00 0.00 35.61 3.85
2130 2302 7.333423 TGGATGAACTTTTGTATCCTAACTTCG 59.667 37.037 0.00 0.00 38.04 3.79
2131 2303 8.561738 TGGATGAACTTTTGTATCCTAACTTC 57.438 34.615 0.00 0.00 38.04 3.01
2132 2304 8.934023 TTGGATGAACTTTTGTATCCTAACTT 57.066 30.769 0.00 0.00 38.04 2.66
2133 2305 8.383175 TCTTGGATGAACTTTTGTATCCTAACT 58.617 33.333 0.00 0.00 38.04 2.24
2134 2306 8.561738 TCTTGGATGAACTTTTGTATCCTAAC 57.438 34.615 0.00 0.00 38.04 2.34
2220 2393 1.985895 ACAGTAAAGCCCCTAACAGCT 59.014 47.619 0.00 0.00 42.40 4.24
2264 2437 9.730420 GTGTGTAAACATTCAGACAATTTAACT 57.270 29.630 0.00 0.00 0.00 2.24
2265 2438 9.509855 TGTGTGTAAACATTCAGACAATTTAAC 57.490 29.630 0.00 0.00 35.50 2.01
2267 2440 9.676195 CATGTGTGTAAACATTCAGACAATTTA 57.324 29.630 0.00 0.00 40.23 1.40
2268 2441 7.169645 GCATGTGTGTAAACATTCAGACAATTT 59.830 33.333 0.00 0.00 40.23 1.82
2269 2442 6.642131 GCATGTGTGTAAACATTCAGACAATT 59.358 34.615 0.00 0.00 40.23 2.32
2270 2443 6.016024 AGCATGTGTGTAAACATTCAGACAAT 60.016 34.615 0.00 0.00 40.23 2.71
2271 2444 5.299028 AGCATGTGTGTAAACATTCAGACAA 59.701 36.000 0.00 0.00 40.23 3.18
2272 2445 4.821260 AGCATGTGTGTAAACATTCAGACA 59.179 37.500 0.00 0.00 38.75 3.41
2273 2446 5.362556 AGCATGTGTGTAAACATTCAGAC 57.637 39.130 0.00 0.00 38.75 3.51
2274 2447 6.710295 ACTAAGCATGTGTGTAAACATTCAGA 59.290 34.615 0.00 0.00 38.75 3.27
2275 2448 6.902341 ACTAAGCATGTGTGTAAACATTCAG 58.098 36.000 0.00 0.00 38.75 3.02
2276 2449 6.875948 ACTAAGCATGTGTGTAAACATTCA 57.124 33.333 0.00 0.00 38.75 2.57
2277 2450 7.359595 TGAACTAAGCATGTGTGTAAACATTC 58.640 34.615 0.00 0.00 38.75 2.67
2278 2451 7.270757 TGAACTAAGCATGTGTGTAAACATT 57.729 32.000 0.00 0.00 38.75 2.71
2279 2452 6.875948 TGAACTAAGCATGTGTGTAAACAT 57.124 33.333 0.00 0.00 41.50 2.71
2280 2453 6.875948 ATGAACTAAGCATGTGTGTAAACA 57.124 33.333 0.00 0.00 0.00 2.83
2281 2454 8.504005 ACTAATGAACTAAGCATGTGTGTAAAC 58.496 33.333 0.00 0.00 0.00 2.01
2282 2455 8.615878 ACTAATGAACTAAGCATGTGTGTAAA 57.384 30.769 0.00 0.00 0.00 2.01
2283 2456 8.503196 CAACTAATGAACTAAGCATGTGTGTAA 58.497 33.333 0.00 0.00 0.00 2.41
2284 2457 7.360861 GCAACTAATGAACTAAGCATGTGTGTA 60.361 37.037 0.00 0.00 0.00 2.90
2285 2458 6.568462 GCAACTAATGAACTAAGCATGTGTGT 60.568 38.462 0.00 0.00 0.00 3.72
2286 2459 5.796935 GCAACTAATGAACTAAGCATGTGTG 59.203 40.000 0.00 0.00 0.00 3.82
2287 2460 5.707298 AGCAACTAATGAACTAAGCATGTGT 59.293 36.000 0.00 0.00 0.00 3.72
2288 2461 6.187125 AGCAACTAATGAACTAAGCATGTG 57.813 37.500 0.00 0.00 0.00 3.21
2289 2462 6.615088 CAAGCAACTAATGAACTAAGCATGT 58.385 36.000 0.00 0.00 0.00 3.21
2411 2613 7.445121 CACAGAGCCATGAGAAAACCTATATA 58.555 38.462 0.00 0.00 0.00 0.86
2412 2614 6.294473 CACAGAGCCATGAGAAAACCTATAT 58.706 40.000 0.00 0.00 0.00 0.86
2454 2656 7.333528 TGCTTTTCTCTCTTAAACACATTGT 57.666 32.000 0.00 0.00 0.00 2.71
2458 2660 6.374333 ACTGTTGCTTTTCTCTCTTAAACACA 59.626 34.615 0.00 0.00 0.00 3.72
2488 2690 5.487488 TGACATGGACTTCTGGTACCTAAAT 59.513 40.000 14.36 0.00 0.00 1.40
2505 2707 5.964958 ATAACCAAGTTTCTGTGACATGG 57.035 39.130 0.00 0.00 40.67 3.66
2540 2743 3.650942 ACAGGGTATCCAGTTGAAAGACA 59.349 43.478 0.00 0.00 34.83 3.41
2541 2744 4.287766 ACAGGGTATCCAGTTGAAAGAC 57.712 45.455 0.00 0.00 34.83 3.01
2610 2813 6.209391 TCGCCTGATAGAGTATGATCATTGAA 59.791 38.462 14.65 0.00 31.81 2.69
2641 2850 1.112113 TAGCTCTTCTTACAGGGCCG 58.888 55.000 0.00 0.00 41.81 6.13
2876 3093 6.052360 TCCAATTTTTACCCTTGAAAACAGC 58.948 36.000 0.00 0.00 0.00 4.40
3308 3556 1.270305 CCTCTCACTCTCAACCGCAAA 60.270 52.381 0.00 0.00 0.00 3.68
3309 3557 0.318441 CCTCTCACTCTCAACCGCAA 59.682 55.000 0.00 0.00 0.00 4.85
3435 3684 5.497474 AGTAAGCACGAAATTTACCCAGAT 58.503 37.500 0.00 0.00 0.00 2.90
3495 3744 7.439356 GCTGCATACAACACAGATTCTTCTATA 59.561 37.037 0.00 0.00 33.10 1.31
3523 3772 6.712547 ACTTCTGTTCTATCAGGGAAAAACTG 59.287 38.462 0.00 0.00 36.25 3.16
3840 4089 3.574216 GTGTGTTGCACAGATTTTTGC 57.426 42.857 1.86 0.00 45.43 3.68
3891 4140 6.916360 TTGTCTTAGGCAAGGAAAATCAAT 57.084 33.333 0.00 0.00 32.22 2.57
3934 4183 6.043706 CCAGTCCCCAGAAATATACAGATTCT 59.956 42.308 0.00 0.00 33.83 2.40
3935 4184 6.234177 CCAGTCCCCAGAAATATACAGATTC 58.766 44.000 0.00 0.00 0.00 2.52
3980 4229 8.232913 TCAAAATAGCCAATACCCTCAATAAC 57.767 34.615 0.00 0.00 0.00 1.89
4019 4268 5.646577 ACGCAGGTCTCATATATAAGGTC 57.353 43.478 0.00 0.00 0.00 3.85
4038 4287 3.504520 TCTGGGACCAAATTAGAAAACGC 59.495 43.478 0.00 0.00 0.00 4.84
4239 4488 6.560003 TTTATTGTGAATAGGAGGAGCTGA 57.440 37.500 0.00 0.00 0.00 4.26
4355 4606 0.768221 ACCAGGAAAGAGGACAGCCA 60.768 55.000 0.00 0.00 36.29 4.75
4356 4607 0.402121 AACCAGGAAAGAGGACAGCC 59.598 55.000 0.00 0.00 0.00 4.85
4468 4722 3.792124 GCTTAAAATAGCCCGATGTGCAC 60.792 47.826 10.75 10.75 35.06 4.57
4802 5056 3.904234 GCGAACAACGTATTTTCCAAGAC 59.096 43.478 0.00 0.00 44.60 3.01
4812 5155 6.897259 AAACTATATGTGCGAACAACGTAT 57.103 33.333 0.00 0.00 44.60 3.06
4887 5230 9.512588 CCTTCCTCTTATGAGTAATTTGCATAT 57.487 33.333 5.03 0.00 38.61 1.78
4909 5252 4.940654 AGATCTACAAAGCTTTCTGCCTTC 59.059 41.667 9.23 2.88 44.23 3.46
4995 5338 3.192422 CCTAGCAATACTCTCGATGAGGG 59.808 52.174 13.92 0.00 46.72 4.30
5064 5408 5.418840 ACAACTCAAACTGTTCAAGTCCAAT 59.581 36.000 7.85 0.00 38.56 3.16
5086 5430 8.050930 AGGAAGACCTAAACTTCAAAACTAACA 58.949 33.333 0.00 0.00 45.83 2.41
5119 5463 9.915629 CCTATTCCTACATATTCTAGTTCACAC 57.084 37.037 0.00 0.00 0.00 3.82
5322 5670 5.070685 TCTAACAGTCAGTTCACTAGCAGA 58.929 41.667 0.00 0.00 41.64 4.26
5335 5683 3.704566 AGTGACACAACCTCTAACAGTCA 59.295 43.478 8.59 0.00 32.70 3.41
5350 5698 0.308993 GCAGAACAGCCAAGTGACAC 59.691 55.000 0.00 0.00 0.00 3.67
5388 5736 2.178273 CGCAAAAGGCCTAACCGC 59.822 61.111 5.16 5.94 46.52 5.68
5389 5737 2.874751 CCGCAAAAGGCCTAACCG 59.125 61.111 5.16 6.88 46.52 4.44
5414 5770 7.389053 ACTCTCCTACAAATTTCATTCACTGAC 59.611 37.037 0.00 0.00 32.17 3.51
5422 5778 3.375299 GCGCACTCTCCTACAAATTTCAT 59.625 43.478 0.30 0.00 0.00 2.57
5453 5809 7.165495 TGGTACAGGGATATAAGGTGTACTA 57.835 40.000 9.97 2.61 42.01 1.82
5493 5849 9.587772 ACATCTTGACAAGTACAGTAATACATC 57.412 33.333 14.75 0.00 0.00 3.06
5514 5914 6.560003 TTATGTACAAGGACCATCACATCT 57.440 37.500 0.00 0.00 0.00 2.90
5588 5988 6.092259 GTGGAAGACGAAATATAAGCAGTTGT 59.908 38.462 0.00 0.00 0.00 3.32
5703 6107 2.124403 GGATGGGCAGCTCCTGTG 60.124 66.667 0.00 0.00 33.43 3.66
5717 6121 3.840666 ACTGACATGTACTGGAACTGGAT 59.159 43.478 0.00 0.00 0.00 3.41
5776 6180 9.996554 TTTATTCAAGTCAATGTAGTTCTCAGA 57.003 29.630 0.00 0.00 0.00 3.27
5852 6256 1.784358 CCGTGGACTATGGGTAGGAA 58.216 55.000 0.00 0.00 31.96 3.36
5894 6298 0.687354 GAGGAAGTCTGAACAGCCCA 59.313 55.000 0.00 0.00 0.00 5.36
5965 6369 2.366533 AGCAACAGCAGAATCATCAGG 58.633 47.619 0.00 0.00 0.00 3.86
5989 6393 7.569858 AGAATCCATTTTCATCCCCATTATTGT 59.430 33.333 0.00 0.00 0.00 2.71
6017 6421 1.052617 TTCCATGTCCTTGTCACGGA 58.947 50.000 0.00 0.00 0.00 4.69
6090 6494 1.471287 GTTACGGGGTCAATTTCCAGC 59.529 52.381 0.00 0.00 0.00 4.85
6117 6521 2.354704 GGTTGATTCACGTCCATCTGGA 60.355 50.000 0.00 0.00 43.08 3.86
6368 6790 5.369409 TCTCCTGAGTATCGAAGGAGTAA 57.631 43.478 23.24 8.23 44.64 2.24
6456 6878 3.119137 AGTTTGCTTTGGGAGTGTCAAAC 60.119 43.478 7.36 7.36 41.84 2.93
6672 7094 2.455674 TCAGAGTTCCAACCATGTCG 57.544 50.000 0.00 0.00 0.00 4.35
6926 7353 0.606130 TGCATGCACACGGAACTCAT 60.606 50.000 18.46 0.00 0.00 2.90
6957 7384 9.135189 GCAAAATCATATATTAGGCCCATATCA 57.865 33.333 0.00 0.00 0.00 2.15
6958 7385 9.359653 AGCAAAATCATATATTAGGCCCATATC 57.640 33.333 0.00 0.00 0.00 1.63
6959 7386 9.719433 AAGCAAAATCATATATTAGGCCCATAT 57.281 29.630 0.00 4.58 0.00 1.78
6960 7387 9.189156 GAAGCAAAATCATATATTAGGCCCATA 57.811 33.333 0.00 0.00 0.00 2.74
6990 7424 1.966762 CCCACCGCTTCTGCATTTT 59.033 52.632 0.00 0.00 39.64 1.82
6991 7425 2.639327 GCCCACCGCTTCTGCATTT 61.639 57.895 0.00 0.00 39.64 2.32
7017 7451 0.912486 AGGTTTTCATCCCCTCTCCG 59.088 55.000 0.00 0.00 0.00 4.63
7032 7466 4.020485 AGGTCAGTTTAGACGCATAAGGTT 60.020 41.667 0.00 0.00 39.42 3.50
7272 7706 8.053355 ACTGTAAGCCTATAAAGCTATGGTTTT 58.947 33.333 0.15 0.00 40.49 2.43
7275 7709 6.749036 ACTGTAAGCCTATAAAGCTATGGT 57.251 37.500 0.00 0.00 40.49 3.55
7290 7724 2.159462 GGCATCTTGCTGAACTGTAAGC 60.159 50.000 8.11 8.11 44.28 3.09
7601 8070 1.597302 CTCCAGCGCCAGATCCATG 60.597 63.158 2.29 0.00 0.00 3.66
7602 8071 2.815945 CCTCCAGCGCCAGATCCAT 61.816 63.158 2.29 0.00 0.00 3.41
7603 8072 3.473647 CCTCCAGCGCCAGATCCA 61.474 66.667 2.29 0.00 0.00 3.41
7604 8073 3.157252 TCCTCCAGCGCCAGATCC 61.157 66.667 2.29 0.00 0.00 3.36
7605 8074 2.107953 GTCCTCCAGCGCCAGATC 59.892 66.667 2.29 0.00 0.00 2.75
7606 8075 2.685017 TGTCCTCCAGCGCCAGAT 60.685 61.111 2.29 0.00 0.00 2.90
7607 8076 3.695606 GTGTCCTCCAGCGCCAGA 61.696 66.667 2.29 0.00 0.00 3.86
7608 8077 4.767255 GGTGTCCTCCAGCGCCAG 62.767 72.222 2.29 0.00 35.49 4.85
7610 8079 4.101448 ATGGTGTCCTCCAGCGCC 62.101 66.667 2.29 0.00 44.68 6.53
7611 8080 2.238847 TACATGGTGTCCTCCAGCGC 62.239 60.000 0.00 0.00 44.68 5.92
7612 8081 0.460284 GTACATGGTGTCCTCCAGCG 60.460 60.000 0.00 0.00 44.68 5.18
7613 8082 0.460284 CGTACATGGTGTCCTCCAGC 60.460 60.000 0.00 0.00 41.05 4.85
7614 8083 0.460284 GCGTACATGGTGTCCTCCAG 60.460 60.000 0.00 0.00 41.05 3.86
7615 8084 1.594833 GCGTACATGGTGTCCTCCA 59.405 57.895 0.00 0.00 42.01 3.86
7616 8085 1.518572 CGCGTACATGGTGTCCTCC 60.519 63.158 0.00 0.00 0.00 4.30
7617 8086 2.165301 GCGCGTACATGGTGTCCTC 61.165 63.158 8.43 0.00 0.00 3.71
7618 8087 2.125673 GCGCGTACATGGTGTCCT 60.126 61.111 8.43 0.00 0.00 3.85
7619 8088 2.125673 AGCGCGTACATGGTGTCC 60.126 61.111 8.43 0.00 0.00 4.02
7620 8089 2.452813 CCAGCGCGTACATGGTGTC 61.453 63.158 8.43 0.00 31.88 3.67
7621 8090 2.434185 CCAGCGCGTACATGGTGT 60.434 61.111 8.43 0.00 31.88 4.16
7622 8091 2.125713 TCCAGCGCGTACATGGTG 60.126 61.111 8.43 6.56 35.51 4.17
7623 8092 2.125673 GTCCAGCGCGTACATGGT 60.126 61.111 8.43 0.00 35.51 3.55
7624 8093 3.254654 CGTCCAGCGCGTACATGG 61.255 66.667 8.43 11.57 35.30 3.66
7625 8094 2.202557 TCGTCCAGCGCGTACATG 60.203 61.111 8.43 1.63 41.07 3.21
7626 8095 2.102357 CTCGTCCAGCGCGTACAT 59.898 61.111 8.43 0.00 41.07 2.29
7627 8096 4.111016 CCTCGTCCAGCGCGTACA 62.111 66.667 8.43 0.00 41.07 2.90
7644 8113 3.064324 AATCCCTTGCTGCACCGC 61.064 61.111 0.00 0.00 0.00 5.68
7645 8114 1.973281 ACAATCCCTTGCTGCACCG 60.973 57.895 0.00 0.00 35.69 4.94
7646 8115 1.588082 CACAATCCCTTGCTGCACC 59.412 57.895 0.00 0.00 35.69 5.01
7647 8116 1.080298 GCACAATCCCTTGCTGCAC 60.080 57.895 0.00 0.00 38.33 4.57
7648 8117 2.277591 GGCACAATCCCTTGCTGCA 61.278 57.895 0.00 0.00 39.27 4.41
7649 8118 2.575461 GGCACAATCCCTTGCTGC 59.425 61.111 0.00 0.00 38.85 5.25
7650 8119 2.879907 CGGCACAATCCCTTGCTG 59.120 61.111 0.00 0.00 38.85 4.41
7651 8120 1.228552 AACGGCACAATCCCTTGCT 60.229 52.632 0.00 0.00 38.85 3.91
7652 8121 1.212751 GAACGGCACAATCCCTTGC 59.787 57.895 0.00 0.00 35.69 4.01
7653 8122 0.523072 CTGAACGGCACAATCCCTTG 59.477 55.000 0.00 0.00 38.39 3.61
7654 8123 1.244019 GCTGAACGGCACAATCCCTT 61.244 55.000 0.40 0.00 0.00 3.95
7655 8124 1.675641 GCTGAACGGCACAATCCCT 60.676 57.895 0.40 0.00 0.00 4.20
7656 8125 2.877691 GCTGAACGGCACAATCCC 59.122 61.111 0.40 0.00 0.00 3.85
7657 8126 2.480555 CGCTGAACGGCACAATCC 59.519 61.111 6.44 0.00 38.44 3.01
7666 8135 2.202756 GGAGGTAGCCGCTGAACG 60.203 66.667 2.16 0.00 43.15 3.95
7667 8136 2.202756 CGGAGGTAGCCGCTGAAC 60.203 66.667 2.16 0.00 45.38 3.18
7691 8160 4.491328 GAAGAACTGCTCGCGCGC 62.491 66.667 27.95 23.91 39.65 6.86
7692 8161 3.843240 GGAAGAACTGCTCGCGCG 61.843 66.667 26.76 26.76 39.65 6.86
7693 8162 2.734673 CTGGAAGAACTGCTCGCGC 61.735 63.158 0.00 0.00 34.07 6.86
7694 8163 2.734673 GCTGGAAGAACTGCTCGCG 61.735 63.158 0.00 0.00 34.07 5.87
7695 8164 2.734673 CGCTGGAAGAACTGCTCGC 61.735 63.158 0.00 0.00 34.07 5.03
7696 8165 1.373497 ACGCTGGAAGAACTGCTCG 60.373 57.895 0.00 0.00 34.07 5.03
7697 8166 1.905922 GCACGCTGGAAGAACTGCTC 61.906 60.000 0.00 0.00 34.07 4.26
7698 8167 1.963338 GCACGCTGGAAGAACTGCT 60.963 57.895 0.00 0.00 34.07 4.24
7699 8168 2.253758 TGCACGCTGGAAGAACTGC 61.254 57.895 0.00 0.00 34.07 4.40
7700 8169 0.882042 AGTGCACGCTGGAAGAACTG 60.882 55.000 12.01 0.00 34.07 3.16
7701 8170 0.601311 GAGTGCACGCTGGAAGAACT 60.601 55.000 13.84 0.00 34.07 3.01
7702 8171 0.601311 AGAGTGCACGCTGGAAGAAC 60.601 55.000 22.98 0.24 34.07 3.01
7703 8172 0.601046 CAGAGTGCACGCTGGAAGAA 60.601 55.000 34.81 0.00 39.61 2.52
7704 8173 1.005748 CAGAGTGCACGCTGGAAGA 60.006 57.895 34.81 0.00 39.61 2.87
7705 8174 2.675056 GCAGAGTGCACGCTGGAAG 61.675 63.158 39.59 22.68 44.26 3.46
7706 8175 2.666190 GCAGAGTGCACGCTGGAA 60.666 61.111 39.59 0.00 44.26 3.53
7712 8181 3.648982 TTTGGCGCAGAGTGCACG 61.649 61.111 10.83 0.00 45.36 5.34
7713 8182 2.050985 GTTTGGCGCAGAGTGCAC 60.051 61.111 9.40 9.40 45.36 4.57
7714 8183 1.383456 AAAGTTTGGCGCAGAGTGCA 61.383 50.000 10.83 0.00 45.36 4.57
7715 8184 0.936297 CAAAGTTTGGCGCAGAGTGC 60.936 55.000 10.83 0.00 40.69 4.40
7716 8185 0.936297 GCAAAGTTTGGCGCAGAGTG 60.936 55.000 17.11 0.00 0.00 3.51
7717 8186 1.103398 AGCAAAGTTTGGCGCAGAGT 61.103 50.000 17.11 0.00 34.54 3.24
7718 8187 0.874390 TAGCAAAGTTTGGCGCAGAG 59.126 50.000 17.11 0.00 34.54 3.35
7719 8188 0.874390 CTAGCAAAGTTTGGCGCAGA 59.126 50.000 17.11 0.00 34.54 4.26
7720 8189 0.730494 GCTAGCAAAGTTTGGCGCAG 60.730 55.000 17.11 11.89 34.54 5.18
7721 8190 1.172180 AGCTAGCAAAGTTTGGCGCA 61.172 50.000 18.83 0.00 34.54 6.09
7722 8191 0.455126 GAGCTAGCAAAGTTTGGCGC 60.455 55.000 18.83 9.96 34.54 6.53
7723 8192 0.169009 GGAGCTAGCAAAGTTTGGCG 59.831 55.000 18.83 0.00 34.54 5.69
7724 8193 0.528017 GGGAGCTAGCAAAGTTTGGC 59.472 55.000 18.83 11.73 0.00 4.52
7725 8194 1.909700 TGGGAGCTAGCAAAGTTTGG 58.090 50.000 18.83 2.12 0.00 3.28
7726 8195 3.084039 TCATGGGAGCTAGCAAAGTTTG 58.916 45.455 18.83 11.41 0.00 2.93
7727 8196 3.350833 CTCATGGGAGCTAGCAAAGTTT 58.649 45.455 18.83 0.00 33.67 2.66
7728 8197 2.996631 CTCATGGGAGCTAGCAAAGTT 58.003 47.619 18.83 0.00 33.67 2.66
7729 8198 2.706339 CTCATGGGAGCTAGCAAAGT 57.294 50.000 18.83 0.00 33.67 2.66
7739 8208 2.029649 CCAAAACAACAGCTCATGGGAG 60.030 50.000 0.00 0.00 44.33 4.30
7740 8209 1.962807 CCAAAACAACAGCTCATGGGA 59.037 47.619 0.00 0.00 0.00 4.37
7741 8210 1.688197 ACCAAAACAACAGCTCATGGG 59.312 47.619 0.00 0.00 0.00 4.00
7742 8211 4.789012 ATACCAAAACAACAGCTCATGG 57.211 40.909 0.00 0.00 0.00 3.66
7743 8212 4.386652 GCAATACCAAAACAACAGCTCATG 59.613 41.667 0.00 0.00 0.00 3.07
7744 8213 4.039004 TGCAATACCAAAACAACAGCTCAT 59.961 37.500 0.00 0.00 0.00 2.90
7745 8214 3.382865 TGCAATACCAAAACAACAGCTCA 59.617 39.130 0.00 0.00 0.00 4.26
7746 8215 3.976169 TGCAATACCAAAACAACAGCTC 58.024 40.909 0.00 0.00 0.00 4.09
7747 8216 4.039004 TGATGCAATACCAAAACAACAGCT 59.961 37.500 0.00 0.00 0.00 4.24
7748 8217 4.305769 TGATGCAATACCAAAACAACAGC 58.694 39.130 0.00 0.00 0.00 4.40
7749 8218 4.386652 GCTGATGCAATACCAAAACAACAG 59.613 41.667 0.00 0.00 39.41 3.16
7750 8219 4.039004 AGCTGATGCAATACCAAAACAACA 59.961 37.500 0.00 0.00 42.74 3.33
7751 8220 4.559153 AGCTGATGCAATACCAAAACAAC 58.441 39.130 0.00 0.00 42.74 3.32
7752 8221 4.280425 TGAGCTGATGCAATACCAAAACAA 59.720 37.500 0.00 0.00 42.74 2.83
7753 8222 3.825585 TGAGCTGATGCAATACCAAAACA 59.174 39.130 0.00 0.00 42.74 2.83
7754 8223 4.168760 GTGAGCTGATGCAATACCAAAAC 58.831 43.478 0.00 0.00 42.74 2.43
7755 8224 3.825585 TGTGAGCTGATGCAATACCAAAA 59.174 39.130 0.00 0.00 42.74 2.44
7756 8225 3.191162 GTGTGAGCTGATGCAATACCAAA 59.809 43.478 0.00 0.00 42.74 3.28
7757 8226 2.749076 GTGTGAGCTGATGCAATACCAA 59.251 45.455 0.00 0.00 42.74 3.67
7758 8227 2.026915 AGTGTGAGCTGATGCAATACCA 60.027 45.455 0.00 0.00 42.74 3.25
7759 8228 2.636830 AGTGTGAGCTGATGCAATACC 58.363 47.619 0.00 0.00 42.74 2.73
7760 8229 3.557595 GGTAGTGTGAGCTGATGCAATAC 59.442 47.826 0.00 0.00 42.74 1.89
7761 8230 3.197549 TGGTAGTGTGAGCTGATGCAATA 59.802 43.478 0.00 0.00 42.74 1.90
7762 8231 2.026915 TGGTAGTGTGAGCTGATGCAAT 60.027 45.455 0.00 0.00 42.74 3.56
7763 8232 1.347378 TGGTAGTGTGAGCTGATGCAA 59.653 47.619 0.00 0.00 42.74 4.08
7764 8233 0.975887 TGGTAGTGTGAGCTGATGCA 59.024 50.000 0.00 0.00 42.74 3.96
7765 8234 2.099141 TTGGTAGTGTGAGCTGATGC 57.901 50.000 0.00 0.00 40.05 3.91
7766 8235 2.353889 GCATTGGTAGTGTGAGCTGATG 59.646 50.000 0.00 0.00 0.00 3.07
7767 8236 2.636830 GCATTGGTAGTGTGAGCTGAT 58.363 47.619 0.00 0.00 0.00 2.90
7768 8237 1.339055 GGCATTGGTAGTGTGAGCTGA 60.339 52.381 0.00 0.00 0.00 4.26
7769 8238 1.089920 GGCATTGGTAGTGTGAGCTG 58.910 55.000 0.00 0.00 0.00 4.24
7770 8239 0.692476 TGGCATTGGTAGTGTGAGCT 59.308 50.000 0.00 0.00 0.00 4.09
7771 8240 1.089920 CTGGCATTGGTAGTGTGAGC 58.910 55.000 0.00 0.00 0.00 4.26
7772 8241 1.089920 GCTGGCATTGGTAGTGTGAG 58.910 55.000 0.00 0.00 0.00 3.51
7773 8242 0.399833 TGCTGGCATTGGTAGTGTGA 59.600 50.000 0.00 0.00 0.00 3.58
7774 8243 0.806868 CTGCTGGCATTGGTAGTGTG 59.193 55.000 0.00 0.00 0.00 3.82
7775 8244 0.962356 GCTGCTGGCATTGGTAGTGT 60.962 55.000 0.00 0.00 41.35 3.55
7776 8245 0.679002 AGCTGCTGGCATTGGTAGTG 60.679 55.000 0.00 0.00 44.79 2.74
7777 8246 0.911769 TAGCTGCTGGCATTGGTAGT 59.088 50.000 13.43 0.00 44.79 2.73
7778 8247 1.134280 AGTAGCTGCTGGCATTGGTAG 60.134 52.381 13.43 0.00 44.79 3.18
7779 8248 0.911769 AGTAGCTGCTGGCATTGGTA 59.088 50.000 13.43 0.00 44.79 3.25
7780 8249 0.679002 CAGTAGCTGCTGGCATTGGT 60.679 55.000 22.82 0.00 44.79 3.67
7781 8250 2.104267 CAGTAGCTGCTGGCATTGG 58.896 57.895 22.82 0.00 44.79 3.16
7791 8260 1.270518 ACCAGTGAACTGCAGTAGCTG 60.271 52.381 22.01 24.42 42.47 4.24
7792 8261 1.051812 ACCAGTGAACTGCAGTAGCT 58.948 50.000 22.01 15.19 42.47 3.32
7793 8262 1.151668 CACCAGTGAACTGCAGTAGC 58.848 55.000 22.01 15.86 42.47 3.58
7794 8263 2.533266 ACACCAGTGAACTGCAGTAG 57.467 50.000 22.01 7.91 42.47 2.57
7806 8275 1.451927 CTGCACACCACACACCAGT 60.452 57.895 0.00 0.00 0.00 4.00
7807 8276 1.031571 AACTGCACACCACACACCAG 61.032 55.000 0.00 0.00 0.00 4.00
7808 8277 1.001517 AACTGCACACCACACACCA 60.002 52.632 0.00 0.00 0.00 4.17
7809 8278 1.727467 GAACTGCACACCACACACC 59.273 57.895 0.00 0.00 0.00 4.16
7810 8279 1.351707 CGAACTGCACACCACACAC 59.648 57.895 0.00 0.00 0.00 3.82
7811 8280 1.817520 CCGAACTGCACACCACACA 60.818 57.895 0.00 0.00 0.00 3.72
7812 8281 3.022287 CCGAACTGCACACCACAC 58.978 61.111 0.00 0.00 0.00 3.82
7813 8282 2.034048 TAGCCGAACTGCACACCACA 62.034 55.000 0.00 0.00 0.00 4.17
7814 8283 1.301401 TAGCCGAACTGCACACCAC 60.301 57.895 0.00 0.00 0.00 4.16
7815 8284 1.301401 GTAGCCGAACTGCACACCA 60.301 57.895 0.00 0.00 0.00 4.17
7816 8285 1.004918 AGTAGCCGAACTGCACACC 60.005 57.895 0.00 0.00 32.54 4.16
7817 8286 4.675404 AGTAGCCGAACTGCACAC 57.325 55.556 0.00 0.00 32.54 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.