Multiple sequence alignment - TraesCS1D01G282200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G282200 chr1D 100.000 4483 0 0 1 4483 379592111 379587629 0.000000e+00 8279.0
1 TraesCS1D01G282200 chr1D 100.000 1384 0 0 4881 6264 379587231 379585848 0.000000e+00 2556.0
2 TraesCS1D01G282200 chr1D 84.615 91 10 4 3764 3854 465189006 465189092 3.110000e-13 87.9
3 TraesCS1D01G282200 chr1A 93.766 1572 67 17 2223 3767 480758161 480756594 0.000000e+00 2331.0
4 TraesCS1D01G282200 chr1A 85.581 1290 90 49 5003 6263 480755563 480754341 0.000000e+00 1264.0
5 TraesCS1D01G282200 chr1A 90.000 560 38 12 845 1392 480759642 480759089 0.000000e+00 708.0
6 TraesCS1D01G282200 chr1A 91.897 506 35 2 1740 2240 480758750 480758246 0.000000e+00 702.0
7 TraesCS1D01G282200 chr1A 83.763 388 49 8 3893 4272 480756524 480756143 7.720000e-94 355.0
8 TraesCS1D01G282200 chr1A 90.987 233 16 5 371 601 520860837 520861066 6.100000e-80 309.0
9 TraesCS1D01G282200 chr1A 92.473 186 13 1 1558 1742 480759096 480758911 1.340000e-66 265.0
10 TraesCS1D01G282200 chr1B 93.369 1478 68 14 2302 3755 509013098 509011627 0.000000e+00 2159.0
11 TraesCS1D01G282200 chr1B 88.363 971 65 18 5003 5962 509007539 509006606 0.000000e+00 1123.0
12 TraesCS1D01G282200 chr1B 92.369 747 45 7 1558 2298 509013926 509013186 0.000000e+00 1053.0
13 TraesCS1D01G282200 chr1B 94.575 682 22 4 723 1391 509014599 509013920 0.000000e+00 1040.0
14 TraesCS1D01G282200 chr1B 89.730 740 52 14 1 719 509015377 509014641 0.000000e+00 924.0
15 TraesCS1D01G282200 chr1B 86.514 697 58 26 5003 5685 509010810 509010136 0.000000e+00 734.0
16 TraesCS1D01G282200 chr1B 93.933 478 18 4 5758 6229 509009139 509008667 0.000000e+00 712.0
17 TraesCS1D01G282200 chr1B 86.377 345 36 8 3893 4228 509011543 509011201 3.570000e-97 366.0
18 TraesCS1D01G282200 chr1B 91.304 230 18 2 371 598 653869936 653870165 4.710000e-81 313.0
19 TraesCS1D01G282200 chr1B 84.783 92 10 2 3766 3857 566981926 566981839 8.650000e-14 89.8
20 TraesCS1D01G282200 chr4A 91.453 234 15 5 371 602 729868897 729869127 3.640000e-82 316.0
21 TraesCS1D01G282200 chr4A 90.254 236 20 3 371 604 572708638 572708404 7.890000e-79 305.0
22 TraesCS1D01G282200 chr2A 92.035 226 15 3 371 593 780720830 780721055 1.310000e-81 315.0
23 TraesCS1D01G282200 chr2A 85.135 74 6 4 3767 3840 156368761 156368693 3.130000e-08 71.3
24 TraesCS1D01G282200 chr7B 91.667 228 15 4 371 596 553088684 553088459 4.710000e-81 313.0
25 TraesCS1D01G282200 chr7B 91.630 227 15 4 371 595 717329130 717328906 1.700000e-80 311.0
26 TraesCS1D01G282200 chr7B 95.455 44 2 0 1405 1448 650245912 650245869 3.130000e-08 71.3
27 TraesCS1D01G282200 chr7B 95.455 44 2 0 1405 1448 650260486 650260443 3.130000e-08 71.3
28 TraesCS1D01G282200 chr7B 95.455 44 2 0 1405 1448 650272847 650272804 3.130000e-08 71.3
29 TraesCS1D01G282200 chr6B 91.304 230 16 4 371 598 661915511 661915738 1.700000e-80 311.0
30 TraesCS1D01G282200 chr6B 83.333 102 13 2 3765 3866 527526942 527526845 2.400000e-14 91.6
31 TraesCS1D01G282200 chr6B 84.615 91 10 2 3765 3855 347591278 347591192 3.110000e-13 87.9
32 TraesCS1D01G282200 chr6B 85.714 84 8 3 3771 3854 35661503 35661582 1.120000e-12 86.1
33 TraesCS1D01G282200 chr6A 87.356 87 7 3 3768 3854 60626501 60626583 5.170000e-16 97.1
34 TraesCS1D01G282200 chr4D 88.158 76 5 2 3765 3840 266952373 266952302 3.110000e-13 87.9
35 TraesCS1D01G282200 chr7D 100.000 44 0 0 1405 1448 582542554 582542511 1.450000e-11 82.4
36 TraesCS1D01G282200 chr7D 100.000 44 0 0 1405 1448 582648009 582647966 1.450000e-11 82.4
37 TraesCS1D01G282200 chr6D 83.516 91 11 2 3764 3854 424719922 424720008 1.450000e-11 82.4
38 TraesCS1D01G282200 chr6D 95.455 44 2 0 1405 1448 423098776 423098819 3.130000e-08 71.3
39 TraesCS1D01G282200 chr2D 97.727 44 1 0 1405 1448 6200603 6200646 6.730000e-10 76.8
40 TraesCS1D01G282200 chr2D 95.455 44 2 0 1405 1448 588205126 588205169 3.130000e-08 71.3
41 TraesCS1D01G282200 chr5A 95.455 44 2 0 1405 1448 670998488 670998531 3.130000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G282200 chr1D 379585848 379592111 6263 True 5417.500 8279 100.00000 1 6264 2 chr1D.!!$R1 6263
1 TraesCS1D01G282200 chr1A 480754341 480759642 5301 True 937.500 2331 89.58000 845 6263 6 chr1A.!!$R1 5418
2 TraesCS1D01G282200 chr1B 509006606 509015377 8771 True 1013.875 2159 90.65375 1 6229 8 chr1B.!!$R2 6228

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
496 502 0.249238 CCGGCTCAATCTCTCGAAGG 60.249 60.000 0.0 0.0 0.00 3.46 F
1394 1476 0.176680 ACAGGAGGTATGAAGCAGCG 59.823 55.000 0.0 0.0 0.00 5.18 F
1397 1479 0.178068 GGAGGTATGAAGCAGCGGAA 59.822 55.000 0.0 0.0 0.00 4.30 F
2387 2834 0.323908 ACAGTTCGAGAGAGGGGGAG 60.324 60.000 0.0 0.0 43.69 4.30 F
2388 2835 1.040339 CAGTTCGAGAGAGGGGGAGG 61.040 65.000 0.0 0.0 43.69 4.30 F
4052 4554 1.042003 TTGCAGGCACAAGAAGGCAA 61.042 50.000 0.0 0.0 38.75 4.52 F
4370 5159 0.031721 CCGAATCCGCCTACCTGTAC 59.968 60.000 0.0 0.0 0.00 2.90 F
5161 5962 1.339055 CGAATGAAGGAGTGGGCAGAA 60.339 52.381 0.0 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1558 1640 0.442310 GACGTAATTGCGCTGCTTCA 59.558 50.000 16.17 0.0 34.88 3.02 R
3377 3825 1.606668 GTGAGATAGTCCTCTGCCTCG 59.393 57.143 0.00 0.0 34.38 4.63 R
3460 3908 9.577110 TCAAATGCTTAGATGCTTTATTTTCTG 57.423 29.630 0.00 0.0 31.49 3.02 R
4343 4904 0.462047 AGGCGGATTCGGATTCACAC 60.462 55.000 0.00 0.0 36.79 3.82 R
4353 5142 0.743097 ACGTACAGGTAGGCGGATTC 59.257 55.000 0.00 0.0 0.00 2.52 R
5125 5926 0.108585 TTCGCTCACCTTCTGCCTTT 59.891 50.000 0.00 0.0 0.00 3.11 R
5182 5983 0.251922 ATGCTTGGGCCAGTGTTGAT 60.252 50.000 6.23 0.0 37.74 2.57 R
5983 7736 1.079875 GCATTCGCCCTCGTTCGTAA 61.080 55.000 0.00 0.0 36.96 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 1.058695 CACACTTTACGCCGATTCGAC 59.941 52.381 7.83 0.00 0.00 4.20
66 67 3.792053 ATTCGACCGGCCATCTCGC 62.792 63.158 0.00 0.00 0.00 5.03
74 75 1.880340 GGCCATCTCGCTCAAGTCG 60.880 63.158 0.00 0.00 0.00 4.18
82 83 4.696899 TCTCGCTCAAGTCGAAAATCTA 57.303 40.909 0.00 0.00 35.38 1.98
89 90 5.147330 TCAAGTCGAAAATCTAGCTCCAA 57.853 39.130 0.00 0.00 0.00 3.53
127 128 7.829378 GTTTGGAAACCTAGAGTACACTATG 57.171 40.000 0.20 1.20 32.82 2.23
157 158 2.016165 CGAGCTTGCGTTTTTGGGC 61.016 57.895 0.00 0.00 0.00 5.36
186 187 3.636231 CCAGGCCGAGGACCACAA 61.636 66.667 11.49 0.00 0.00 3.33
191 192 2.732016 CCGAGGACCACAACGACA 59.268 61.111 0.00 0.00 0.00 4.35
206 207 2.881074 ACGACACTTTCATCCAGATCG 58.119 47.619 0.00 0.00 32.88 3.69
224 225 3.053831 TCGAGGAGTCAAACCCAAATC 57.946 47.619 0.00 0.00 0.00 2.17
231 232 1.539827 GTCAAACCCAAATCAGGACCG 59.460 52.381 0.00 0.00 0.00 4.79
234 235 0.609131 AACCCAAATCAGGACCGCAG 60.609 55.000 0.00 0.00 0.00 5.18
243 244 1.986757 AGGACCGCAGTGCAGATCT 60.987 57.895 16.83 4.10 36.65 2.75
245 246 1.364626 GGACCGCAGTGCAGATCTTG 61.365 60.000 16.83 0.00 33.83 3.02
266 267 2.814336 GCCTTGGATCGATACCAATTCC 59.186 50.000 21.74 10.05 44.74 3.01
395 400 6.942532 TCTTGGATTTATTTCAAGATCCCG 57.057 37.500 0.00 0.00 41.04 5.14
410 416 2.202298 CCGGCGATGCGTTTTCAC 60.202 61.111 9.30 0.00 0.00 3.18
416 422 0.443869 CGATGCGTTTTCACTGGGAG 59.556 55.000 0.00 0.00 0.00 4.30
422 428 1.797025 GTTTTCACTGGGAGGAGACG 58.203 55.000 0.00 0.00 0.00 4.18
425 431 1.420430 TTCACTGGGAGGAGACGTTT 58.580 50.000 0.00 0.00 0.00 3.60
485 491 2.104622 TCAAGATGATATGCCGGCTCAA 59.895 45.455 29.70 13.42 0.00 3.02
491 497 2.028658 TGATATGCCGGCTCAATCTCTC 60.029 50.000 29.70 12.76 0.00 3.20
494 500 1.141881 GCCGGCTCAATCTCTCGAA 59.858 57.895 22.15 0.00 0.00 3.71
496 502 0.249238 CCGGCTCAATCTCTCGAAGG 60.249 60.000 0.00 0.00 0.00 3.46
508 514 0.390860 CTCGAAGGTGCTCATAGGGG 59.609 60.000 0.00 0.00 0.00 4.79
513 519 0.941963 AGGTGCTCATAGGGGTAGGA 59.058 55.000 0.00 0.00 0.00 2.94
515 521 1.625818 GGTGCTCATAGGGGTAGGATG 59.374 57.143 0.00 0.00 0.00 3.51
537 543 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
538 544 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
539 545 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
548 554 3.132289 CGTTCATAGGGGTGAGTGTATGT 59.868 47.826 0.00 0.00 0.00 2.29
584 590 1.452025 CTTGCGTCTGTACTGTGTTCG 59.548 52.381 0.00 0.63 0.00 3.95
587 593 2.121786 GCGTCTGTACTGTGTTCGAAA 58.878 47.619 0.00 0.00 0.00 3.46
588 594 2.153247 GCGTCTGTACTGTGTTCGAAAG 59.847 50.000 0.00 0.00 0.00 2.62
589 595 3.624900 CGTCTGTACTGTGTTCGAAAGA 58.375 45.455 0.00 0.00 39.20 2.52
659 684 1.408683 GCAGGCATACATGTTCCTCCA 60.409 52.381 2.30 0.00 0.00 3.86
676 701 3.628257 CCTCCAGGGCCATAAAAATCACT 60.628 47.826 6.18 0.00 0.00 3.41
677 702 3.631250 TCCAGGGCCATAAAAATCACTC 58.369 45.455 6.18 0.00 0.00 3.51
696 721 8.888579 ATCACTCCTGTAATTTTATTCTACGG 57.111 34.615 0.00 0.00 0.00 4.02
719 744 4.389374 CCTGTTTGAAGAAAGGAGCACTA 58.611 43.478 0.00 0.00 30.92 2.74
720 745 4.821805 CCTGTTTGAAGAAAGGAGCACTAA 59.178 41.667 0.00 0.00 30.92 2.24
769 832 6.402766 CGCCATCAATTTTGCAAGATGAAAAT 60.403 34.615 21.66 6.91 40.10 1.82
770 833 6.745450 GCCATCAATTTTGCAAGATGAAAATG 59.255 34.615 21.66 13.79 40.10 2.32
771 834 7.574217 GCCATCAATTTTGCAAGATGAAAATGT 60.574 33.333 21.66 2.93 40.10 2.71
924 987 0.818296 CTTCCATCGAACCGGACTCT 59.182 55.000 9.46 0.00 0.00 3.24
1167 1249 1.115467 ATCAGAGCCCGTCAGGTTAG 58.885 55.000 0.00 0.00 38.26 2.34
1191 1273 4.570874 GCCCCTCCATTCGCCTCC 62.571 72.222 0.00 0.00 0.00 4.30
1217 1299 0.615544 CCCTCCCCGTTGTACCAGTA 60.616 60.000 0.00 0.00 0.00 2.74
1392 1474 3.243704 GCTCTACAGGAGGTATGAAGCAG 60.244 52.174 0.00 0.00 42.08 4.24
1393 1475 2.695666 TCTACAGGAGGTATGAAGCAGC 59.304 50.000 0.00 0.00 0.00 5.25
1394 1476 0.176680 ACAGGAGGTATGAAGCAGCG 59.823 55.000 0.00 0.00 0.00 5.18
1395 1477 0.531532 CAGGAGGTATGAAGCAGCGG 60.532 60.000 0.00 0.00 0.00 5.52
1396 1478 0.687757 AGGAGGTATGAAGCAGCGGA 60.688 55.000 0.00 0.00 0.00 5.54
1397 1479 0.178068 GGAGGTATGAAGCAGCGGAA 59.822 55.000 0.00 0.00 0.00 4.30
1398 1480 1.406887 GGAGGTATGAAGCAGCGGAAA 60.407 52.381 0.00 0.00 0.00 3.13
1399 1481 2.356135 GAGGTATGAAGCAGCGGAAAA 58.644 47.619 0.00 0.00 0.00 2.29
1400 1482 2.747446 GAGGTATGAAGCAGCGGAAAAA 59.253 45.455 0.00 0.00 0.00 1.94
1422 1504 5.708736 AAAATTTGAACAAAAGAGGGGGT 57.291 34.783 4.12 0.00 33.56 4.95
1423 1505 5.708736 AAATTTGAACAAAAGAGGGGGTT 57.291 34.783 4.12 0.00 33.56 4.11
1424 1506 5.708736 AATTTGAACAAAAGAGGGGGTTT 57.291 34.783 4.12 0.00 33.56 3.27
1425 1507 4.746535 TTTGAACAAAAGAGGGGGTTTC 57.253 40.909 0.00 0.00 0.00 2.78
1426 1508 2.673258 TGAACAAAAGAGGGGGTTTCC 58.327 47.619 0.00 0.00 0.00 3.13
1427 1509 6.926735 ATTTGAACAAAAGAGGGGGTTTCCC 61.927 44.000 4.12 0.00 43.96 3.97
1437 1519 3.970205 GGGTTTCCCTCCGATTTCA 57.030 52.632 0.00 0.00 41.34 2.69
1438 1520 2.437085 GGGTTTCCCTCCGATTTCAT 57.563 50.000 0.00 0.00 41.34 2.57
1439 1521 2.735151 GGGTTTCCCTCCGATTTCATT 58.265 47.619 0.00 0.00 41.34 2.57
1440 1522 3.893521 GGGTTTCCCTCCGATTTCATTA 58.106 45.455 0.00 0.00 41.34 1.90
1441 1523 4.274978 GGGTTTCCCTCCGATTTCATTAA 58.725 43.478 0.00 0.00 41.34 1.40
1442 1524 4.707934 GGGTTTCCCTCCGATTTCATTAAA 59.292 41.667 0.00 0.00 41.34 1.52
1443 1525 5.163550 GGGTTTCCCTCCGATTTCATTAAAG 60.164 44.000 0.00 0.00 41.34 1.85
1444 1526 5.650703 GGTTTCCCTCCGATTTCATTAAAGA 59.349 40.000 0.00 0.00 0.00 2.52
1445 1527 6.152154 GGTTTCCCTCCGATTTCATTAAAGAA 59.848 38.462 0.00 0.00 0.00 2.52
1446 1528 7.309560 GGTTTCCCTCCGATTTCATTAAAGAAA 60.310 37.037 8.20 8.20 41.31 2.52
1447 1529 6.753107 TCCCTCCGATTTCATTAAAGAAAC 57.247 37.500 7.95 2.84 40.03 2.78
1448 1530 6.242396 TCCCTCCGATTTCATTAAAGAAACA 58.758 36.000 7.95 0.00 40.03 2.83
1449 1531 6.150474 TCCCTCCGATTTCATTAAAGAAACAC 59.850 38.462 7.95 5.40 40.03 3.32
1450 1532 6.322491 CCTCCGATTTCATTAAAGAAACACC 58.678 40.000 7.95 1.29 40.03 4.16
1451 1533 6.072175 CCTCCGATTTCATTAAAGAAACACCA 60.072 38.462 7.95 0.00 40.03 4.17
1452 1534 6.674066 TCCGATTTCATTAAAGAAACACCAC 58.326 36.000 7.95 0.00 40.03 4.16
1453 1535 6.263392 TCCGATTTCATTAAAGAAACACCACA 59.737 34.615 7.95 0.00 40.03 4.17
1454 1536 6.362283 CCGATTTCATTAAAGAAACACCACAC 59.638 38.462 7.95 0.00 40.03 3.82
1455 1537 6.086241 CGATTTCATTAAAGAAACACCACACG 59.914 38.462 7.95 3.46 40.03 4.49
1456 1538 6.438259 TTTCATTAAAGAAACACCACACGA 57.562 33.333 1.84 0.00 32.88 4.35
1457 1539 6.438259 TTCATTAAAGAAACACCACACGAA 57.562 33.333 0.00 0.00 0.00 3.85
1458 1540 6.438259 TCATTAAAGAAACACCACACGAAA 57.562 33.333 0.00 0.00 0.00 3.46
1459 1541 6.259638 TCATTAAAGAAACACCACACGAAAC 58.740 36.000 0.00 0.00 0.00 2.78
1460 1542 5.624344 TTAAAGAAACACCACACGAAACA 57.376 34.783 0.00 0.00 0.00 2.83
1461 1543 4.506886 AAAGAAACACCACACGAAACAA 57.493 36.364 0.00 0.00 0.00 2.83
1462 1544 3.757745 AGAAACACCACACGAAACAAG 57.242 42.857 0.00 0.00 0.00 3.16
1463 1545 3.078837 AGAAACACCACACGAAACAAGT 58.921 40.909 0.00 0.00 0.00 3.16
1464 1546 3.504520 AGAAACACCACACGAAACAAGTT 59.495 39.130 0.00 0.00 0.00 2.66
1465 1547 3.481112 AACACCACACGAAACAAGTTC 57.519 42.857 0.00 0.00 0.00 3.01
1466 1548 1.741145 ACACCACACGAAACAAGTTCC 59.259 47.619 0.00 0.00 31.99 3.62
1467 1549 1.740585 CACCACACGAAACAAGTTCCA 59.259 47.619 0.00 0.00 31.99 3.53
1468 1550 2.162608 CACCACACGAAACAAGTTCCAA 59.837 45.455 0.00 0.00 31.99 3.53
1469 1551 2.820787 ACCACACGAAACAAGTTCCAAA 59.179 40.909 0.00 0.00 31.99 3.28
1470 1552 3.175929 CCACACGAAACAAGTTCCAAAC 58.824 45.455 0.00 0.00 31.99 2.93
1471 1553 3.119637 CCACACGAAACAAGTTCCAAACT 60.120 43.478 0.00 0.00 45.46 2.66
1483 1565 5.019785 AGTTCCAAACTTAGAACAGTCGT 57.980 39.130 5.76 0.00 43.89 4.34
1484 1566 6.152932 AGTTCCAAACTTAGAACAGTCGTA 57.847 37.500 5.76 0.00 43.89 3.43
1485 1567 5.981915 AGTTCCAAACTTAGAACAGTCGTAC 59.018 40.000 5.76 0.00 43.89 3.67
1486 1568 4.874970 TCCAAACTTAGAACAGTCGTACC 58.125 43.478 0.00 0.00 0.00 3.34
1487 1569 4.341806 TCCAAACTTAGAACAGTCGTACCA 59.658 41.667 0.00 0.00 0.00 3.25
1488 1570 5.051816 CCAAACTTAGAACAGTCGTACCAA 58.948 41.667 0.00 0.00 0.00 3.67
1489 1571 5.050567 CCAAACTTAGAACAGTCGTACCAAC 60.051 44.000 0.00 0.00 0.00 3.77
1517 1599 6.821031 CTATTACAGCTACTACTACCCAGG 57.179 45.833 0.00 0.00 0.00 4.45
1518 1600 2.456073 ACAGCTACTACTACCCAGGG 57.544 55.000 2.85 2.85 0.00 4.45
1519 1601 1.928077 ACAGCTACTACTACCCAGGGA 59.072 52.381 14.54 0.00 0.00 4.20
1520 1602 2.313945 ACAGCTACTACTACCCAGGGAA 59.686 50.000 14.54 0.00 0.00 3.97
1521 1603 2.959707 CAGCTACTACTACCCAGGGAAG 59.040 54.545 14.54 6.43 0.00 3.46
1522 1604 2.091222 AGCTACTACTACCCAGGGAAGG 60.091 54.545 14.54 3.93 0.00 3.46
1523 1605 2.359037 GCTACTACTACCCAGGGAAGGT 60.359 54.545 14.54 10.09 41.64 3.50
1524 1606 3.884929 GCTACTACTACCCAGGGAAGGTT 60.885 52.174 14.54 0.00 38.89 3.50
1525 1607 2.830293 ACTACTACCCAGGGAAGGTTC 58.170 52.381 14.54 0.00 38.89 3.62
1526 1608 2.386113 ACTACTACCCAGGGAAGGTTCT 59.614 50.000 14.54 0.00 38.89 3.01
1527 1609 3.599698 ACTACTACCCAGGGAAGGTTCTA 59.400 47.826 14.54 0.00 38.89 2.10
1528 1610 3.117552 ACTACCCAGGGAAGGTTCTAG 57.882 52.381 14.54 3.81 38.89 2.43
1529 1611 2.386113 ACTACCCAGGGAAGGTTCTAGT 59.614 50.000 14.54 4.54 38.89 2.57
1530 1612 3.599698 ACTACCCAGGGAAGGTTCTAGTA 59.400 47.826 14.54 0.00 38.89 1.82
1531 1613 3.797671 ACCCAGGGAAGGTTCTAGTAT 57.202 47.619 14.54 0.00 32.05 2.12
1532 1614 4.090027 ACCCAGGGAAGGTTCTAGTATT 57.910 45.455 14.54 0.00 32.05 1.89
1533 1615 4.038633 ACCCAGGGAAGGTTCTAGTATTC 58.961 47.826 14.54 0.00 32.05 1.75
1534 1616 4.037927 CCCAGGGAAGGTTCTAGTATTCA 58.962 47.826 0.00 0.00 0.00 2.57
1535 1617 4.473559 CCCAGGGAAGGTTCTAGTATTCAA 59.526 45.833 0.00 0.00 0.00 2.69
1536 1618 5.396884 CCCAGGGAAGGTTCTAGTATTCAAG 60.397 48.000 0.00 0.00 0.00 3.02
1537 1619 5.119694 CAGGGAAGGTTCTAGTATTCAAGC 58.880 45.833 0.00 0.00 0.00 4.01
1538 1620 5.033522 AGGGAAGGTTCTAGTATTCAAGCT 58.966 41.667 0.00 0.00 0.00 3.74
1539 1621 6.098409 CAGGGAAGGTTCTAGTATTCAAGCTA 59.902 42.308 0.00 0.00 0.00 3.32
1540 1622 6.098552 AGGGAAGGTTCTAGTATTCAAGCTAC 59.901 42.308 0.00 0.00 0.00 3.58
1541 1623 6.098552 GGGAAGGTTCTAGTATTCAAGCTACT 59.901 42.308 0.00 0.00 34.01 2.57
1542 1624 7.287235 GGGAAGGTTCTAGTATTCAAGCTACTA 59.713 40.741 0.00 0.00 31.96 1.82
1543 1625 8.354426 GGAAGGTTCTAGTATTCAAGCTACTAG 58.646 40.741 12.57 12.57 45.22 2.57
1544 1626 8.826293 AAGGTTCTAGTATTCAAGCTACTAGT 57.174 34.615 16.55 0.00 44.62 2.57
1545 1627 8.228035 AGGTTCTAGTATTCAAGCTACTAGTG 57.772 38.462 16.55 0.00 44.62 2.74
1546 1628 6.919115 GGTTCTAGTATTCAAGCTACTAGTGC 59.081 42.308 16.55 7.40 44.62 4.40
1547 1629 7.416438 GGTTCTAGTATTCAAGCTACTAGTGCA 60.416 40.741 16.55 4.18 44.62 4.57
1548 1630 7.265647 TCTAGTATTCAAGCTACTAGTGCAG 57.734 40.000 16.55 0.00 44.62 4.41
1549 1631 5.923733 AGTATTCAAGCTACTAGTGCAGT 57.076 39.130 5.39 0.00 41.62 4.40
1550 1632 6.287589 AGTATTCAAGCTACTAGTGCAGTT 57.712 37.500 5.39 0.00 38.80 3.16
1551 1633 7.406031 AGTATTCAAGCTACTAGTGCAGTTA 57.594 36.000 5.39 0.00 38.80 2.24
1552 1634 8.012957 AGTATTCAAGCTACTAGTGCAGTTAT 57.987 34.615 5.39 3.73 38.80 1.89
1553 1635 8.138712 AGTATTCAAGCTACTAGTGCAGTTATC 58.861 37.037 5.39 0.00 38.80 1.75
1554 1636 5.914898 TCAAGCTACTAGTGCAGTTATCA 57.085 39.130 5.39 0.00 38.80 2.15
1555 1637 5.895928 TCAAGCTACTAGTGCAGTTATCAG 58.104 41.667 5.39 0.00 38.80 2.90
1556 1638 5.652452 TCAAGCTACTAGTGCAGTTATCAGA 59.348 40.000 5.39 0.00 38.80 3.27
1557 1639 6.152831 TCAAGCTACTAGTGCAGTTATCAGAA 59.847 38.462 5.39 0.00 38.80 3.02
1558 1640 6.723298 AGCTACTAGTGCAGTTATCAGAAT 57.277 37.500 5.39 0.00 38.80 2.40
1559 1641 6.511416 AGCTACTAGTGCAGTTATCAGAATG 58.489 40.000 5.39 0.00 38.80 2.67
1560 1642 6.322456 AGCTACTAGTGCAGTTATCAGAATGA 59.678 38.462 5.39 0.00 44.32 2.57
1561 1643 6.980978 GCTACTAGTGCAGTTATCAGAATGAA 59.019 38.462 5.39 0.00 43.73 2.57
1562 1644 7.168972 GCTACTAGTGCAGTTATCAGAATGAAG 59.831 40.741 5.39 0.00 43.73 3.02
1563 1645 5.814705 ACTAGTGCAGTTATCAGAATGAAGC 59.185 40.000 0.00 0.00 41.99 3.86
1564 1646 6.575056 ACTAGTGCAGTTATCAGAATGAAGCA 60.575 38.462 0.00 0.00 41.99 3.91
1565 1647 8.323014 ACTAGTGCAGTTATCAGAATGAAGCAG 61.323 40.741 0.00 0.00 41.99 4.24
1662 1746 3.945981 TTACAGTCTGGTATTGTCGCA 57.054 42.857 4.53 0.00 29.68 5.10
1667 1751 1.594862 GTCTGGTATTGTCGCAGCATC 59.405 52.381 0.00 0.00 0.00 3.91
1694 1778 6.778069 AGGAATGTTCTAGCTATAGCACACTA 59.222 38.462 26.07 9.13 37.87 2.74
1761 2008 5.220605 GCTACATTCTAGTTTGGTTAAGGCG 60.221 44.000 0.00 0.00 0.00 5.52
1790 2042 3.337358 CTGGTGCATGAACATAGTGTGA 58.663 45.455 6.08 0.00 0.00 3.58
1870 2122 6.919115 ACAAACGTTTTAACATATTCGGCTTT 59.081 30.769 11.66 0.00 0.00 3.51
1902 2154 6.897413 AGAACTGCCTAATGGGATTGTTATTT 59.103 34.615 0.00 0.00 37.23 1.40
1951 2203 1.056660 GTGAGGTTCCACTCCCTTCA 58.943 55.000 0.00 0.00 36.66 3.02
1960 2212 4.301072 TCCACTCCCTTCACTTAATTGG 57.699 45.455 0.00 0.00 0.00 3.16
1969 2221 4.397417 CCTTCACTTAATTGGCCTTCTCAG 59.603 45.833 3.32 0.00 0.00 3.35
1975 2227 1.831580 ATTGGCCTTCTCAGTTGAGC 58.168 50.000 3.32 0.00 41.80 4.26
1990 2242 6.959361 TCAGTTGAGCAGATTTGAGTAAAAC 58.041 36.000 0.00 0.00 0.00 2.43
2076 2328 2.794820 AAGTCGCTCCTTCTGCAGCC 62.795 60.000 9.47 0.00 31.37 4.85
2079 2331 1.673665 CGCTCCTTCTGCAGCCTTT 60.674 57.895 9.47 0.00 31.37 3.11
2097 2349 5.241728 AGCCTTTAGAGGTGCTTTACTTTTG 59.758 40.000 0.58 0.00 45.44 2.44
2227 2484 7.554118 TGATTTTAGCAGATAGAAACAGGGAAG 59.446 37.037 0.00 0.00 0.00 3.46
2387 2834 0.323908 ACAGTTCGAGAGAGGGGGAG 60.324 60.000 0.00 0.00 43.69 4.30
2388 2835 1.040339 CAGTTCGAGAGAGGGGGAGG 61.040 65.000 0.00 0.00 43.69 4.30
2389 2836 1.758906 GTTCGAGAGAGGGGGAGGG 60.759 68.421 0.00 0.00 43.69 4.30
2420 2867 6.648725 GGGATACTAATTCAGTTCATGCTCTC 59.351 42.308 0.00 0.00 38.80 3.20
2426 2873 3.874392 TCAGTTCATGCTCTCGAATGA 57.126 42.857 0.00 0.00 0.00 2.57
2469 2916 9.757227 TTTTTATTTAAATGTGTAGTTGCTGCT 57.243 25.926 11.05 0.00 0.00 4.24
2542 2989 7.094508 TGCGAGCAAATATTTATCCTTTTCA 57.905 32.000 0.00 0.00 0.00 2.69
2665 3112 6.670617 AGAAATCAAATGGTCTGATCAGGAT 58.329 36.000 22.42 11.94 32.26 3.24
2666 3113 6.546403 AGAAATCAAATGGTCTGATCAGGATG 59.454 38.462 22.42 12.00 32.26 3.51
2782 3229 8.093927 GCATATCTCTGCTAGAAAATAAGGAGT 58.906 37.037 0.00 0.00 37.89 3.85
2790 3237 8.908786 TGCTAGAAAATAAGGAGTGGATATTG 57.091 34.615 0.00 0.00 0.00 1.90
2792 3239 9.343539 GCTAGAAAATAAGGAGTGGATATTGTT 57.656 33.333 0.00 0.00 0.00 2.83
2966 3414 5.464168 AGTGTTCATTACAGAAAATGCTGC 58.536 37.500 0.00 0.00 39.51 5.25
3196 3644 4.730487 AGTCATTCTGTGGCTGGC 57.270 55.556 0.00 0.00 42.38 4.85
3268 3716 5.376854 AGAGATCCATTTTGAAACCAACG 57.623 39.130 0.00 0.00 0.00 4.10
3326 3774 4.475527 GACGGCAACTTGTCCCTT 57.524 55.556 0.00 0.00 0.00 3.95
3377 3825 4.607955 GGTGCTTTTACAGGAAGTTTGAC 58.392 43.478 0.00 0.00 0.00 3.18
3498 3946 6.173339 TCTAAGCATTTGACCTCCAAGTTAG 58.827 40.000 0.00 0.00 35.94 2.34
3499 3947 4.640771 AGCATTTGACCTCCAAGTTAGA 57.359 40.909 0.00 0.00 35.94 2.10
3503 3951 6.995091 AGCATTTGACCTCCAAGTTAGATATC 59.005 38.462 0.00 0.00 35.94 1.63
3510 3958 9.159254 TGACCTCCAAGTTAGATATCATGTAAT 57.841 33.333 5.32 0.00 0.00 1.89
3561 4009 4.401202 CCAAAGGTTGGTATGGTATTGACC 59.599 45.833 0.00 0.00 45.93 4.02
3635 4083 5.878406 ATAATGGTTCAGGAGGTCAGTAG 57.122 43.478 0.00 0.00 0.00 2.57
3641 4089 4.407296 GGTTCAGGAGGTCAGTAGATCATT 59.593 45.833 0.00 0.00 0.00 2.57
3643 4091 6.098409 GGTTCAGGAGGTCAGTAGATCATTAA 59.902 42.308 0.00 0.00 0.00 1.40
3644 4092 6.716934 TCAGGAGGTCAGTAGATCATTAAC 57.283 41.667 0.00 0.00 0.00 2.01
3645 4093 6.436027 TCAGGAGGTCAGTAGATCATTAACT 58.564 40.000 0.00 0.00 0.00 2.24
3646 4094 6.547880 TCAGGAGGTCAGTAGATCATTAACTC 59.452 42.308 0.00 0.00 0.00 3.01
3649 4097 8.282982 AGGAGGTCAGTAGATCATTAACTCTAA 58.717 37.037 0.00 0.00 0.00 2.10
3669 4139 9.905713 ACTCTAATAGAATAATTGGTCTTTGCA 57.094 29.630 0.00 0.00 0.00 4.08
3687 4157 5.659440 TTGCATTCCCTTGGTCTTAAATC 57.341 39.130 0.00 0.00 0.00 2.17
3718 4188 6.500684 TGAGTTAAGAATGTGGCAATTCTC 57.499 37.500 18.60 10.81 44.35 2.87
3736 4206 8.027771 GCAATTCTCATTCTTTCTCAAATCAGT 58.972 33.333 0.00 0.00 0.00 3.41
3778 4248 9.880157 TTTGTTAATTATGTACTCCCTCTGTAC 57.120 33.333 0.00 0.00 40.27 2.90
3779 4249 8.015185 TGTTAATTATGTACTCCCTCTGTACC 57.985 38.462 0.00 0.00 39.42 3.34
3780 4250 7.620491 TGTTAATTATGTACTCCCTCTGTACCA 59.380 37.037 0.00 0.00 39.42 3.25
3781 4251 8.480501 GTTAATTATGTACTCCCTCTGTACCAA 58.519 37.037 0.00 0.00 39.42 3.67
3782 4252 7.504926 AATTATGTACTCCCTCTGTACCAAA 57.495 36.000 0.00 0.00 39.42 3.28
3783 4253 6.938698 TTATGTACTCCCTCTGTACCAAAA 57.061 37.500 0.00 0.00 39.42 2.44
3784 4254 7.504926 TTATGTACTCCCTCTGTACCAAAAT 57.495 36.000 0.00 0.00 39.42 1.82
3785 4255 5.836024 TGTACTCCCTCTGTACCAAAATT 57.164 39.130 0.00 0.00 39.42 1.82
3786 4256 6.195600 TGTACTCCCTCTGTACCAAAATTT 57.804 37.500 0.00 0.00 39.42 1.82
3787 4257 7.319052 TGTACTCCCTCTGTACCAAAATTTA 57.681 36.000 0.00 0.00 39.42 1.40
3788 4258 7.747690 TGTACTCCCTCTGTACCAAAATTTAA 58.252 34.615 0.00 0.00 39.42 1.52
3789 4259 8.219178 TGTACTCCCTCTGTACCAAAATTTAAA 58.781 33.333 0.00 0.00 39.42 1.52
3790 4260 7.761038 ACTCCCTCTGTACCAAAATTTAAAG 57.239 36.000 0.00 0.00 0.00 1.85
3791 4261 7.523415 ACTCCCTCTGTACCAAAATTTAAAGA 58.477 34.615 0.00 0.00 0.00 2.52
3792 4262 7.447545 ACTCCCTCTGTACCAAAATTTAAAGAC 59.552 37.037 0.00 0.00 0.00 3.01
3793 4263 6.428771 TCCCTCTGTACCAAAATTTAAAGACG 59.571 38.462 0.00 0.00 0.00 4.18
3794 4264 6.206048 CCCTCTGTACCAAAATTTAAAGACGT 59.794 38.462 0.00 0.00 0.00 4.34
3795 4265 7.255346 CCCTCTGTACCAAAATTTAAAGACGTT 60.255 37.037 0.00 0.00 0.00 3.99
3796 4266 8.132995 CCTCTGTACCAAAATTTAAAGACGTTT 58.867 33.333 0.00 0.00 0.00 3.60
3797 4267 9.511144 CTCTGTACCAAAATTTAAAGACGTTTT 57.489 29.630 0.00 0.00 0.00 2.43
3798 4268 9.857957 TCTGTACCAAAATTTAAAGACGTTTTT 57.142 25.926 9.22 9.22 0.00 1.94
3827 4297 7.613146 CACTACTATGATAGTGTCAAAAAGCG 58.387 38.462 15.08 0.00 44.74 4.68
3828 4298 7.275779 CACTACTATGATAGTGTCAAAAAGCGT 59.724 37.037 15.08 0.00 44.74 5.07
3829 4299 6.648725 ACTATGATAGTGTCAAAAAGCGTC 57.351 37.500 3.96 0.00 40.97 5.19
3830 4300 6.398918 ACTATGATAGTGTCAAAAAGCGTCT 58.601 36.000 3.96 0.00 40.97 4.18
3831 4301 6.874134 ACTATGATAGTGTCAAAAAGCGTCTT 59.126 34.615 3.96 0.00 40.97 3.01
3832 4302 8.033038 ACTATGATAGTGTCAAAAAGCGTCTTA 58.967 33.333 3.96 0.00 40.97 2.10
3833 4303 7.667043 ATGATAGTGTCAAAAAGCGTCTTAA 57.333 32.000 0.00 0.00 40.97 1.85
3834 4304 7.485418 TGATAGTGTCAAAAAGCGTCTTAAA 57.515 32.000 0.00 0.00 32.78 1.52
3835 4305 8.094798 TGATAGTGTCAAAAAGCGTCTTAAAT 57.905 30.769 0.00 0.00 32.78 1.40
3836 4306 8.564574 TGATAGTGTCAAAAAGCGTCTTAAATT 58.435 29.630 0.00 0.00 32.78 1.82
3837 4307 9.394477 GATAGTGTCAAAAAGCGTCTTAAATTT 57.606 29.630 0.00 0.00 0.00 1.82
3838 4308 9.744468 ATAGTGTCAAAAAGCGTCTTAAATTTT 57.256 25.926 0.00 0.00 0.00 1.82
3839 4309 7.894847 AGTGTCAAAAAGCGTCTTAAATTTTG 58.105 30.769 0.00 0.00 40.53 2.44
3840 4310 7.757624 AGTGTCAAAAAGCGTCTTAAATTTTGA 59.242 29.630 0.00 7.63 43.68 2.69
3841 4311 8.539674 GTGTCAAAAAGCGTCTTAAATTTTGAT 58.460 29.630 13.15 0.00 45.90 2.57
3842 4312 9.737427 TGTCAAAAAGCGTCTTAAATTTTGATA 57.263 25.926 13.15 9.12 45.90 2.15
3845 4315 9.956797 CAAAAAGCGTCTTAAATTTTGATATGG 57.043 29.630 0.00 0.00 41.26 2.74
3846 4316 9.921637 AAAAAGCGTCTTAAATTTTGATATGGA 57.078 25.926 0.00 0.00 0.00 3.41
3847 4317 9.921637 AAAAGCGTCTTAAATTTTGATATGGAA 57.078 25.926 0.00 0.00 0.00 3.53
3848 4318 9.573133 AAAGCGTCTTAAATTTTGATATGGAAG 57.427 29.630 0.00 0.00 0.00 3.46
3849 4319 7.707104 AGCGTCTTAAATTTTGATATGGAAGG 58.293 34.615 0.00 0.00 0.00 3.46
3850 4320 7.556275 AGCGTCTTAAATTTTGATATGGAAGGA 59.444 33.333 0.00 0.00 0.00 3.36
3851 4321 7.857885 GCGTCTTAAATTTTGATATGGAAGGAG 59.142 37.037 0.00 0.00 0.00 3.69
3860 4330 9.799106 ATTTTGATATGGAAGGAGTATTACTGG 57.201 33.333 0.00 0.00 0.00 4.00
3874 4344 3.655615 TTACTGGTTGGTGGAGTTTGT 57.344 42.857 0.00 0.00 0.00 2.83
3876 4346 1.283613 ACTGGTTGGTGGAGTTTGTGA 59.716 47.619 0.00 0.00 0.00 3.58
3877 4347 1.949525 CTGGTTGGTGGAGTTTGTGAG 59.050 52.381 0.00 0.00 0.00 3.51
3878 4348 1.283613 TGGTTGGTGGAGTTTGTGAGT 59.716 47.619 0.00 0.00 0.00 3.41
3879 4349 2.506231 TGGTTGGTGGAGTTTGTGAGTA 59.494 45.455 0.00 0.00 0.00 2.59
3880 4350 3.139077 GGTTGGTGGAGTTTGTGAGTAG 58.861 50.000 0.00 0.00 0.00 2.57
3882 4352 3.746045 TGGTGGAGTTTGTGAGTAGTC 57.254 47.619 0.00 0.00 0.00 2.59
3885 4355 4.163458 TGGTGGAGTTTGTGAGTAGTCTTT 59.837 41.667 0.00 0.00 0.00 2.52
3886 4356 4.750598 GGTGGAGTTTGTGAGTAGTCTTTC 59.249 45.833 0.00 0.00 0.00 2.62
3887 4357 5.453480 GGTGGAGTTTGTGAGTAGTCTTTCT 60.453 44.000 0.00 0.00 0.00 2.52
3890 4360 5.923684 GGAGTTTGTGAGTAGTCTTTCTCTG 59.076 44.000 0.00 0.00 0.00 3.35
3891 4361 5.293560 AGTTTGTGAGTAGTCTTTCTCTGC 58.706 41.667 0.00 0.00 0.00 4.26
3896 4397 1.889829 AGTAGTCTTTCTCTGCGCTGT 59.110 47.619 9.73 0.00 0.00 4.40
3915 4416 2.981784 TGTCTGATTGCAGGGGCTATAT 59.018 45.455 0.00 0.00 42.53 0.86
3954 4455 1.927487 TGAAAGCACCTGCCATCAAT 58.073 45.000 0.00 0.00 43.38 2.57
3984 4486 6.849697 AGGGTAAAACATGATCTCCTATGGTA 59.150 38.462 0.00 0.00 0.00 3.25
3988 4490 9.003658 GTAAAACATGATCTCCTATGGTATTGG 57.996 37.037 0.00 0.00 0.00 3.16
3989 4491 5.171339 ACATGATCTCCTATGGTATTGGC 57.829 43.478 0.00 0.00 0.00 4.52
3992 4494 3.840666 TGATCTCCTATGGTATTGGCTCC 59.159 47.826 0.00 0.00 0.00 4.70
4000 4502 6.102615 TCCTATGGTATTGGCTCCTGTTAATT 59.897 38.462 0.00 0.00 0.00 1.40
4010 4512 3.430453 CTCCTGTTAATTCCTTGGGCAA 58.570 45.455 0.00 0.00 0.00 4.52
4012 4514 3.768757 TCCTGTTAATTCCTTGGGCAATG 59.231 43.478 0.00 0.00 0.00 2.82
4022 4524 3.576550 TCCTTGGGCAATGTTAAGTTTCC 59.423 43.478 0.00 0.00 0.00 3.13
4027 4529 6.926630 TGGGCAATGTTAAGTTTCCTATTT 57.073 33.333 0.00 0.00 0.00 1.40
4052 4554 1.042003 TTGCAGGCACAAGAAGGCAA 61.042 50.000 0.00 0.00 38.75 4.52
4073 4575 6.350528 GGCAAGTCGATTGGAGAGATATCATA 60.351 42.308 5.32 0.00 39.47 2.15
4077 4579 7.353525 AGTCGATTGGAGAGATATCATATCCT 58.646 38.462 17.03 0.00 0.00 3.24
4079 4581 7.920151 GTCGATTGGAGAGATATCATATCCTTG 59.080 40.741 17.03 6.69 0.00 3.61
4105 4607 9.397280 GGCTAGAGGTTATACTTTGAATCTTTT 57.603 33.333 0.00 0.00 0.00 2.27
4148 4650 5.963594 GTATTCTACCAGAAGACGGTTCTT 58.036 41.667 0.00 0.00 45.35 2.52
4150 4652 2.561419 TCTACCAGAAGACGGTTCTTGG 59.439 50.000 12.53 12.53 42.53 3.61
4151 4653 1.420430 ACCAGAAGACGGTTCTTGGA 58.580 50.000 17.33 0.00 42.53 3.53
4153 4655 2.372172 ACCAGAAGACGGTTCTTGGATT 59.628 45.455 17.33 2.83 42.53 3.01
4154 4656 3.581332 ACCAGAAGACGGTTCTTGGATTA 59.419 43.478 17.33 0.00 42.53 1.75
4155 4657 4.184629 CCAGAAGACGGTTCTTGGATTAG 58.815 47.826 0.00 0.00 42.53 1.73
4156 4658 4.322801 CCAGAAGACGGTTCTTGGATTAGT 60.323 45.833 0.00 0.00 42.53 2.24
4157 4659 5.105473 CCAGAAGACGGTTCTTGGATTAGTA 60.105 44.000 0.00 0.00 42.53 1.82
4158 4660 6.037098 CAGAAGACGGTTCTTGGATTAGTAG 58.963 44.000 0.00 0.00 42.53 2.57
4160 4662 6.436532 AGAAGACGGTTCTTGGATTAGTAGAA 59.563 38.462 0.00 0.00 42.53 2.10
4181 4689 6.681777 AGAAAAGTTACTTCATGCAACATCC 58.318 36.000 0.00 0.00 0.00 3.51
4184 4692 6.992063 AAGTTACTTCATGCAACATCCTAG 57.008 37.500 0.00 0.00 0.00 3.02
4191 4699 5.300411 TCATGCAACATCCTAGATGTCAT 57.700 39.130 10.47 8.05 0.00 3.06
4192 4700 5.061179 TCATGCAACATCCTAGATGTCATG 58.939 41.667 21.72 21.72 32.60 3.07
4200 4708 6.240894 ACATCCTAGATGTCATGTTGTTTGT 58.759 36.000 4.40 0.00 0.00 2.83
4201 4709 6.716628 ACATCCTAGATGTCATGTTGTTTGTT 59.283 34.615 4.40 0.00 0.00 2.83
4207 4715 7.642071 AGATGTCATGTTGTTTGTTAATTGC 57.358 32.000 0.00 0.00 0.00 3.56
4274 4783 7.875327 TCTAGGTTATGCTTTTACATTTCCC 57.125 36.000 0.00 0.00 0.00 3.97
4275 4784 5.932619 AGGTTATGCTTTTACATTTCCCC 57.067 39.130 0.00 0.00 0.00 4.81
4281 4808 5.263872 TGCTTTTACATTTCCCCTCCTTA 57.736 39.130 0.00 0.00 0.00 2.69
4301 4828 3.425162 ACCTCCTGTTTGAATGAGACC 57.575 47.619 0.00 0.00 0.00 3.85
4304 4831 3.693085 CCTCCTGTTTGAATGAGACCATG 59.307 47.826 0.00 0.00 32.36 3.66
4305 4832 3.689347 TCCTGTTTGAATGAGACCATGG 58.311 45.455 11.19 11.19 32.36 3.66
4327 4888 4.325030 GGGGTGGATCTGGTTAAATCTTGA 60.325 45.833 0.00 0.00 0.00 3.02
4353 5142 4.562082 TGTAACCTAACAGTGTGAATCCG 58.438 43.478 0.00 0.00 0.00 4.18
4356 5145 4.553330 ACCTAACAGTGTGAATCCGAAT 57.447 40.909 0.00 0.00 0.00 3.34
4358 5147 3.871594 CCTAACAGTGTGAATCCGAATCC 59.128 47.826 0.00 0.00 0.00 3.01
4369 5158 0.106569 TCCGAATCCGCCTACCTGTA 60.107 55.000 0.00 0.00 0.00 2.74
4370 5159 0.031721 CCGAATCCGCCTACCTGTAC 59.968 60.000 0.00 0.00 0.00 2.90
4380 5169 3.242543 CGCCTACCTGTACGTGTTAGTAG 60.243 52.174 0.00 4.57 0.00 2.57
4386 5175 5.181748 ACCTGTACGTGTTAGTAGAGTAGG 58.818 45.833 0.00 0.00 36.57 3.18
4387 5176 5.046304 ACCTGTACGTGTTAGTAGAGTAGGA 60.046 44.000 0.00 0.00 36.57 2.94
4388 5177 6.054295 CCTGTACGTGTTAGTAGAGTAGGAT 58.946 44.000 0.00 0.00 36.57 3.24
4389 5178 6.541641 CCTGTACGTGTTAGTAGAGTAGGATT 59.458 42.308 0.00 0.00 36.57 3.01
4394 5195 6.127423 ACGTGTTAGTAGAGTAGGATTGCATT 60.127 38.462 0.00 0.00 0.00 3.56
4404 5205 5.580022 AGTAGGATTGCATTGTAAACCCTT 58.420 37.500 13.84 0.77 0.00 3.95
4405 5206 4.806640 AGGATTGCATTGTAAACCCTTG 57.193 40.909 9.61 0.00 0.00 3.61
4420 5221 4.497291 ACCCTTGTGTTTCAGTAACTGA 57.503 40.909 0.00 0.00 38.87 3.41
4467 5268 6.474140 ACCTTTACGGTTCTTTTGGAATTT 57.526 33.333 0.00 0.00 46.37 1.82
4468 5269 6.880484 ACCTTTACGGTTCTTTTGGAATTTT 58.120 32.000 0.00 0.00 46.37 1.82
4469 5270 7.332557 ACCTTTACGGTTCTTTTGGAATTTTT 58.667 30.769 0.00 0.00 46.37 1.94
4470 5271 7.493320 ACCTTTACGGTTCTTTTGGAATTTTTC 59.507 33.333 0.00 0.00 46.37 2.29
4909 5710 9.517609 AGTTAGTGTTAGTATAAGCTGAATTCG 57.482 33.333 0.04 0.00 0.00 3.34
4910 5711 6.830114 AGTGTTAGTATAAGCTGAATTCGC 57.170 37.500 12.44 12.44 0.00 4.70
4911 5712 6.338146 AGTGTTAGTATAAGCTGAATTCGCA 58.662 36.000 19.45 5.34 0.00 5.10
4927 5728 1.895798 TCGCAGAGTCCTGACAAATCT 59.104 47.619 0.00 0.00 43.02 2.40
4928 5729 1.998315 CGCAGAGTCCTGACAAATCTG 59.002 52.381 9.48 9.48 43.02 2.90
4933 5734 5.395103 GCAGAGTCCTGACAAATCTGAGTAT 60.395 44.000 15.33 0.00 43.02 2.12
4934 5735 6.272318 CAGAGTCCTGACAAATCTGAGTATC 58.728 44.000 8.55 0.00 43.02 2.24
4935 5736 6.127507 CAGAGTCCTGACAAATCTGAGTATCA 60.128 42.308 8.55 0.00 42.85 2.15
4936 5737 5.971763 AGTCCTGACAAATCTGAGTATCAC 58.028 41.667 0.00 0.00 42.56 3.06
4937 5738 5.719085 AGTCCTGACAAATCTGAGTATCACT 59.281 40.000 0.00 0.00 42.56 3.41
4938 5739 6.892456 AGTCCTGACAAATCTGAGTATCACTA 59.108 38.462 0.00 0.00 42.56 2.74
4940 5741 8.200792 GTCCTGACAAATCTGAGTATCACTAAT 58.799 37.037 0.00 0.00 42.56 1.73
4942 5743 8.420222 CCTGACAAATCTGAGTATCACTAATCT 58.580 37.037 0.00 0.00 42.56 2.40
4964 5765 2.907910 AGCAGTGAAAATAAGCAGCG 57.092 45.000 0.00 0.00 0.00 5.18
4966 5767 2.554032 AGCAGTGAAAATAAGCAGCGTT 59.446 40.909 0.00 0.00 0.00 4.84
4967 5768 3.751175 AGCAGTGAAAATAAGCAGCGTTA 59.249 39.130 0.00 0.00 0.00 3.18
4968 5769 4.396166 AGCAGTGAAAATAAGCAGCGTTAT 59.604 37.500 0.00 0.00 0.00 1.89
4969 5770 5.095490 GCAGTGAAAATAAGCAGCGTTATT 58.905 37.500 0.00 0.00 34.67 1.40
4970 5771 5.003778 GCAGTGAAAATAAGCAGCGTTATTG 59.996 40.000 0.00 1.60 33.71 1.90
4971 5772 5.003778 CAGTGAAAATAAGCAGCGTTATTGC 59.996 40.000 9.34 0.00 41.83 3.56
4978 5779 2.763249 GCAGCGTTATTGCTAGCAAT 57.237 45.000 37.46 37.46 45.23 3.56
4979 5780 3.070429 GCAGCGTTATTGCTAGCAATT 57.930 42.857 39.68 26.00 45.23 2.32
4980 5781 2.785477 GCAGCGTTATTGCTAGCAATTG 59.215 45.455 39.68 31.60 45.23 2.32
4981 5782 3.731867 GCAGCGTTATTGCTAGCAATTGT 60.732 43.478 39.68 24.23 45.23 2.71
4982 5783 3.787634 CAGCGTTATTGCTAGCAATTGTG 59.212 43.478 39.68 29.49 45.23 3.33
4983 5784 3.731867 AGCGTTATTGCTAGCAATTGTGC 60.732 43.478 39.68 35.08 45.14 4.57
4984 5785 6.160749 AGCGTTATTGCTAGCAATTGTGCA 62.161 41.667 39.68 23.49 46.74 4.57
4997 5798 5.424518 CAATTGTGCACATTCGTGTATTG 57.575 39.130 22.39 20.01 45.50 1.90
4998 5799 2.610219 TGTGCACATTCGTGTATTGC 57.390 45.000 17.42 0.00 45.50 3.56
4999 5800 2.150390 TGTGCACATTCGTGTATTGCT 58.850 42.857 17.42 0.00 45.50 3.91
5000 5801 2.551887 TGTGCACATTCGTGTATTGCTT 59.448 40.909 17.42 0.00 45.50 3.91
5001 5802 2.910482 GTGCACATTCGTGTATTGCTTG 59.090 45.455 13.17 0.00 45.50 4.01
5012 5813 4.094887 CGTGTATTGCTTGTATTGAGGCTT 59.905 41.667 0.00 0.00 0.00 4.35
5017 5818 4.678509 TGCTTGTATTGAGGCTTTTACG 57.321 40.909 0.00 0.00 0.00 3.18
5021 5822 4.274602 TGTATTGAGGCTTTTACGGTGA 57.725 40.909 0.00 0.00 0.00 4.02
5023 5824 2.922740 TTGAGGCTTTTACGGTGACT 57.077 45.000 0.00 0.00 0.00 3.41
5024 5825 2.163818 TGAGGCTTTTACGGTGACTG 57.836 50.000 0.00 0.00 0.00 3.51
5025 5826 1.414919 TGAGGCTTTTACGGTGACTGT 59.585 47.619 1.37 1.37 0.00 3.55
5028 5829 1.944709 GGCTTTTACGGTGACTGTTGT 59.055 47.619 0.85 0.00 0.00 3.32
5031 5832 3.311596 GCTTTTACGGTGACTGTTGTTCT 59.688 43.478 0.85 0.00 0.00 3.01
5032 5833 4.552184 GCTTTTACGGTGACTGTTGTTCTC 60.552 45.833 0.85 0.00 0.00 2.87
5041 5842 4.208666 GTGACTGTTGTTCTCGTTCTTACC 59.791 45.833 0.00 0.00 0.00 2.85
5042 5843 4.142116 TGACTGTTGTTCTCGTTCTTACCA 60.142 41.667 0.00 0.00 0.00 3.25
5048 5849 4.710324 TGTTCTCGTTCTTACCATTGGTT 58.290 39.130 14.78 0.00 37.09 3.67
5049 5850 5.127491 TGTTCTCGTTCTTACCATTGGTTT 58.873 37.500 14.78 0.00 37.09 3.27
5050 5851 6.289834 TGTTCTCGTTCTTACCATTGGTTTA 58.710 36.000 14.78 1.92 37.09 2.01
5051 5852 6.766944 TGTTCTCGTTCTTACCATTGGTTTAA 59.233 34.615 14.78 2.07 37.09 1.52
5082 5883 5.534278 TGAATTTGTCACTGCTTGTCCAATA 59.466 36.000 0.00 0.00 0.00 1.90
5084 5885 6.594788 ATTTGTCACTGCTTGTCCAATATT 57.405 33.333 0.00 0.00 0.00 1.28
5098 5899 2.413112 CCAATATTCAGGCGAGTATGCG 59.587 50.000 0.00 0.00 35.06 4.73
5113 5914 4.261801 AGTATGCGGAACTGTTGCTTATT 58.738 39.130 10.33 0.47 0.00 1.40
5119 5920 3.745975 CGGAACTGTTGCTTATTCAGTCA 59.254 43.478 10.33 0.00 40.81 3.41
5125 5926 8.621532 AACTGTTGCTTATTCAGTCAAATAGA 57.378 30.769 0.00 0.00 40.81 1.98
5161 5962 1.339055 CGAATGAAGGAGTGGGCAGAA 60.339 52.381 0.00 0.00 0.00 3.02
5182 5983 3.300388 AGATGCCTGGAAGAATCGTAGA 58.700 45.455 0.00 0.00 37.08 2.59
5184 5985 3.735237 TGCCTGGAAGAATCGTAGATC 57.265 47.619 0.00 0.00 37.53 2.75
5189 5990 4.806247 CCTGGAAGAATCGTAGATCAACAC 59.194 45.833 0.00 0.00 37.53 3.32
5191 5992 5.410924 TGGAAGAATCGTAGATCAACACTG 58.589 41.667 0.00 0.00 45.12 3.66
5200 6001 0.895100 GATCAACACTGGCCCAAGCA 60.895 55.000 0.00 0.00 42.56 3.91
5230 6031 5.418310 TTTCAGAAGTTTCAAAGCCTACG 57.582 39.130 0.00 0.00 0.00 3.51
5274 6075 3.259374 AGGGTCATATAGCTTCCATGACG 59.741 47.826 20.05 0.00 46.15 4.35
5278 6079 3.258372 TCATATAGCTTCCATGACGGTCC 59.742 47.826 5.55 0.00 35.57 4.46
5284 6085 0.901114 TTCCATGACGGTCCGAGGAA 60.901 55.000 20.51 20.31 35.57 3.36
5286 6087 0.460284 CCATGACGGTCCGAGGAAAG 60.460 60.000 20.51 2.35 0.00 2.62
5303 6110 7.657761 CCGAGGAAAGTTACTATGCAATAATCT 59.342 37.037 0.00 0.00 0.00 2.40
5310 6117 9.672673 AAGTTACTATGCAATAATCTGTGAACT 57.327 29.630 0.00 0.00 0.00 3.01
5325 6132 7.709269 TCTGTGAACTCAACACTAATGTAAC 57.291 36.000 0.00 0.00 38.45 2.50
5343 6150 6.575244 TGTAACATAGGTTCTCCATGGATT 57.425 37.500 16.63 5.77 38.45 3.01
5354 6161 0.947244 CCATGGATTTGCCTACGCTC 59.053 55.000 5.56 0.00 37.63 5.03
5377 6184 3.248266 GCATGTGTTTCTGATCTTTGGC 58.752 45.455 0.00 0.00 0.00 4.52
5406 6214 3.129287 CACCCTTGCAAATCCAGTACATC 59.871 47.826 0.00 0.00 0.00 3.06
5407 6215 2.355756 CCCTTGCAAATCCAGTACATCG 59.644 50.000 0.00 0.00 0.00 3.84
5408 6216 3.270027 CCTTGCAAATCCAGTACATCGA 58.730 45.455 0.00 0.00 0.00 3.59
5409 6217 3.879295 CCTTGCAAATCCAGTACATCGAT 59.121 43.478 0.00 0.00 0.00 3.59
5410 6218 4.024556 CCTTGCAAATCCAGTACATCGATC 60.025 45.833 0.00 0.00 0.00 3.69
5411 6219 4.135747 TGCAAATCCAGTACATCGATCA 57.864 40.909 0.00 0.00 0.00 2.92
5414 6222 4.612259 GCAAATCCAGTACATCGATCATGC 60.612 45.833 0.00 4.23 35.65 4.06
5416 6224 3.375782 TCCAGTACATCGATCATGCTG 57.624 47.619 14.12 14.12 35.65 4.41
5417 6225 1.797046 CCAGTACATCGATCATGCTGC 59.203 52.381 15.14 0.00 35.65 5.25
5418 6226 1.454653 CAGTACATCGATCATGCTGCG 59.545 52.381 10.21 0.00 35.65 5.18
5419 6227 0.162507 GTACATCGATCATGCTGCGC 59.837 55.000 0.00 0.00 35.65 6.09
5420 6228 0.032540 TACATCGATCATGCTGCGCT 59.967 50.000 9.73 0.00 35.65 5.92
5421 6229 1.220169 ACATCGATCATGCTGCGCTC 61.220 55.000 9.73 0.28 35.65 5.03
5422 6230 0.944788 CATCGATCATGCTGCGCTCT 60.945 55.000 9.73 0.00 0.00 4.09
5423 6231 0.249784 ATCGATCATGCTGCGCTCTT 60.250 50.000 9.73 0.00 0.00 2.85
5424 6232 0.460811 TCGATCATGCTGCGCTCTTT 60.461 50.000 9.73 0.00 0.00 2.52
5425 6233 0.376152 CGATCATGCTGCGCTCTTTT 59.624 50.000 9.73 0.00 0.00 2.27
5426 6234 1.823828 GATCATGCTGCGCTCTTTTG 58.176 50.000 9.73 0.00 0.00 2.44
5427 6235 1.131883 GATCATGCTGCGCTCTTTTGT 59.868 47.619 9.73 0.00 0.00 2.83
5428 6236 0.953727 TCATGCTGCGCTCTTTTGTT 59.046 45.000 9.73 0.00 0.00 2.83
5429 6237 2.150390 TCATGCTGCGCTCTTTTGTTA 58.850 42.857 9.73 0.00 0.00 2.41
5430 6238 2.749076 TCATGCTGCGCTCTTTTGTTAT 59.251 40.909 9.73 0.00 0.00 1.89
5431 6239 3.191162 TCATGCTGCGCTCTTTTGTTATT 59.809 39.130 9.73 0.00 0.00 1.40
5432 6240 3.641437 TGCTGCGCTCTTTTGTTATTT 57.359 38.095 9.73 0.00 0.00 1.40
5433 6241 3.976169 TGCTGCGCTCTTTTGTTATTTT 58.024 36.364 9.73 0.00 0.00 1.82
5434 6242 5.114785 TGCTGCGCTCTTTTGTTATTTTA 57.885 34.783 9.73 0.00 0.00 1.52
5515 6327 7.148407 CCATCTGAATCCAACACTTTAGTACAC 60.148 40.741 0.00 0.00 0.00 2.90
5557 6369 4.049546 ACGTACACACACAACTGTACAT 57.950 40.909 0.00 0.00 41.92 2.29
5608 6421 1.153025 GGGCTTCAATCGGTACCCC 60.153 63.158 6.25 0.00 0.00 4.95
5689 6507 2.117779 TGCACGCACAACACACCAT 61.118 52.632 0.00 0.00 0.00 3.55
5690 6508 1.658102 GCACGCACAACACACCATG 60.658 57.895 0.00 0.00 0.00 3.66
5691 6509 2.020926 CACGCACAACACACCATGA 58.979 52.632 0.00 0.00 0.00 3.07
5692 6510 0.316937 CACGCACAACACACCATGAC 60.317 55.000 0.00 0.00 0.00 3.06
5693 6511 0.746204 ACGCACAACACACCATGACA 60.746 50.000 0.00 0.00 0.00 3.58
5694 6512 0.316937 CGCACAACACACCATGACAC 60.317 55.000 0.00 0.00 0.00 3.67
5695 6513 0.030638 GCACAACACACCATGACACC 59.969 55.000 0.00 0.00 0.00 4.16
5699 6517 1.021202 AACACACCATGACACCAACG 58.979 50.000 0.00 0.00 0.00 4.10
5718 6536 1.528076 TCAGTGCAATGCCCAACGT 60.528 52.632 9.79 0.00 0.00 3.99
5735 6553 6.553524 CCCAACGTAAAACACAAGAAAAGTA 58.446 36.000 0.00 0.00 0.00 2.24
5737 6555 7.245604 CCAACGTAAAACACAAGAAAAGTACT 58.754 34.615 0.00 0.00 0.00 2.73
5739 6557 7.599630 ACGTAAAACACAAGAAAAGTACTGA 57.400 32.000 0.00 0.00 0.00 3.41
5740 6558 7.458677 ACGTAAAACACAAGAAAAGTACTGAC 58.541 34.615 0.00 0.00 0.00 3.51
5741 6559 7.118101 ACGTAAAACACAAGAAAAGTACTGACA 59.882 33.333 0.00 0.00 0.00 3.58
5742 6560 8.120465 CGTAAAACACAAGAAAAGTACTGACAT 58.880 33.333 0.00 0.00 0.00 3.06
5743 6561 9.221775 GTAAAACACAAGAAAAGTACTGACATG 57.778 33.333 0.00 0.00 0.00 3.21
5745 6563 5.680619 ACACAAGAAAAGTACTGACATGGA 58.319 37.500 0.00 0.00 0.00 3.41
5746 6564 6.299141 ACACAAGAAAAGTACTGACATGGAT 58.701 36.000 0.00 0.00 0.00 3.41
5747 6565 6.205464 ACACAAGAAAAGTACTGACATGGATG 59.795 38.462 0.00 0.00 0.00 3.51
5748 6566 5.182001 ACAAGAAAAGTACTGACATGGATGC 59.818 40.000 0.00 0.00 0.00 3.91
5749 6567 5.171339 AGAAAAGTACTGACATGGATGCT 57.829 39.130 0.00 0.00 0.00 3.79
5750 6568 5.181748 AGAAAAGTACTGACATGGATGCTC 58.818 41.667 0.00 0.00 0.00 4.26
5815 7568 2.797278 GGATGGCGACGGAGGTGAT 61.797 63.158 0.00 0.00 0.00 3.06
5836 7589 2.263540 GTCGTAGCGCCCCTTGAA 59.736 61.111 2.29 0.00 0.00 2.69
5874 7627 0.898320 GCTCTGGAAGTACCTCTGCA 59.102 55.000 0.00 0.00 39.86 4.41
5878 7631 3.445008 TCTGGAAGTACCTCTGCATCTT 58.555 45.455 0.00 0.00 39.86 2.40
5982 7735 3.515901 AGTTCTACTCAAGGCGGAAGATT 59.484 43.478 0.00 0.00 0.00 2.40
5983 7736 4.020128 AGTTCTACTCAAGGCGGAAGATTT 60.020 41.667 0.00 0.00 0.00 2.17
6129 7889 1.523711 GCTCCCGATCATTTCCGCA 60.524 57.895 0.00 0.00 0.00 5.69
6132 7892 2.534019 CCCGATCATTTCCGCACCG 61.534 63.158 0.00 0.00 0.00 4.94
6212 7976 7.424452 CGTTCTAAAGTGGTAAACAAATATCGC 59.576 37.037 0.00 0.00 0.00 4.58
6217 7981 5.250200 AGTGGTAAACAAATATCGCCTTCA 58.750 37.500 0.00 0.00 0.00 3.02
6218 7982 5.354234 AGTGGTAAACAAATATCGCCTTCAG 59.646 40.000 0.00 0.00 0.00 3.02
6219 7983 4.095782 TGGTAAACAAATATCGCCTTCAGC 59.904 41.667 0.00 0.00 38.52 4.26
6220 7984 4.095782 GGTAAACAAATATCGCCTTCAGCA 59.904 41.667 0.00 0.00 44.04 4.41
6221 7985 4.989279 AAACAAATATCGCCTTCAGCAT 57.011 36.364 0.00 0.00 44.04 3.79
6222 7986 6.017440 GGTAAACAAATATCGCCTTCAGCATA 60.017 38.462 0.00 0.00 44.04 3.14
6244 8008 2.039613 AGCCTCTGAGAAGAAAACCCTG 59.960 50.000 6.17 0.00 0.00 4.45
6254 8018 1.344763 AGAAAACCCTGAGAGGACACG 59.655 52.381 0.00 0.00 37.67 4.49
6257 8021 1.194781 AACCCTGAGAGGACACGCAT 61.195 55.000 0.00 0.00 37.67 4.73
6263 8027 1.550524 TGAGAGGACACGCATAGCTTT 59.449 47.619 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 2.587194 CTTGAGCGAGATGGCCGG 60.587 66.667 0.00 0.00 0.00 6.13
66 67 4.748892 TGGAGCTAGATTTTCGACTTGAG 58.251 43.478 0.00 0.00 0.00 3.02
74 75 3.625313 GTCTGCCTTGGAGCTAGATTTTC 59.375 47.826 0.00 0.00 0.00 2.29
82 83 0.913451 AGATGGTCTGCCTTGGAGCT 60.913 55.000 0.00 0.00 35.27 4.09
186 187 2.492088 TCGATCTGGATGAAAGTGTCGT 59.508 45.455 0.00 0.00 0.00 4.34
191 192 3.370104 ACTCCTCGATCTGGATGAAAGT 58.630 45.455 5.03 0.00 32.56 2.66
206 207 3.084786 CCTGATTTGGGTTTGACTCCTC 58.915 50.000 0.00 0.00 0.00 3.71
224 225 1.812922 GATCTGCACTGCGGTCCTG 60.813 63.158 9.73 0.00 36.18 3.86
243 244 3.576078 ATTGGTATCGATCCAAGGCAA 57.424 42.857 24.06 7.39 46.14 4.52
245 246 2.814336 GGAATTGGTATCGATCCAAGGC 59.186 50.000 24.06 19.41 46.14 4.35
247 248 3.412386 GGGGAATTGGTATCGATCCAAG 58.588 50.000 24.06 0.00 46.14 3.61
266 267 3.326297 CCTAATCTCTGCTCCTAAAGGGG 59.674 52.174 0.00 0.00 39.22 4.79
392 397 3.427425 TGAAAACGCATCGCCGGG 61.427 61.111 2.18 0.00 0.00 5.73
395 400 1.154225 CCAGTGAAAACGCATCGCC 60.154 57.895 0.00 0.00 0.00 5.54
431 437 2.099831 CGTAGGTGCCTCGTCGTC 59.900 66.667 0.00 0.00 0.00 4.20
485 491 2.890311 CCTATGAGCACCTTCGAGAGAT 59.110 50.000 0.00 0.00 41.60 2.75
491 497 1.341531 CTACCCCTATGAGCACCTTCG 59.658 57.143 0.00 0.00 0.00 3.79
494 500 0.941963 TCCTACCCCTATGAGCACCT 59.058 55.000 0.00 0.00 0.00 4.00
496 502 2.037772 CACATCCTACCCCTATGAGCAC 59.962 54.545 0.00 0.00 0.00 4.40
508 514 1.787847 GCACACACGCACATCCTAC 59.212 57.895 0.00 0.00 0.00 3.18
513 519 1.506309 ATGAACGCACACACGCACAT 61.506 50.000 0.00 0.00 36.19 3.21
515 521 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
537 543 6.251589 GCTCATATATACGCACATACACTCAC 59.748 42.308 1.66 0.00 0.00 3.51
538 544 6.322491 GCTCATATATACGCACATACACTCA 58.678 40.000 1.66 0.00 0.00 3.41
539 545 5.452623 CGCTCATATATACGCACATACACTC 59.547 44.000 6.32 0.00 0.00 3.51
594 600 5.999044 AGAATCCTCACATGTTAGAGCAAT 58.001 37.500 8.66 1.99 0.00 3.56
623 629 5.303259 TGCCTGCACCACTATGAATAATA 57.697 39.130 0.00 0.00 0.00 0.98
624 630 4.169059 TGCCTGCACCACTATGAATAAT 57.831 40.909 0.00 0.00 0.00 1.28
625 631 3.643199 TGCCTGCACCACTATGAATAA 57.357 42.857 0.00 0.00 0.00 1.40
659 684 3.011708 ACAGGAGTGATTTTTATGGCCCT 59.988 43.478 0.00 0.00 0.00 5.19
676 701 6.053005 CAGGCCGTAGAATAAAATTACAGGA 58.947 40.000 0.00 0.00 0.00 3.86
677 702 5.820947 ACAGGCCGTAGAATAAAATTACAGG 59.179 40.000 0.00 0.00 0.00 4.00
690 715 3.399330 CTTTCTTCAAACAGGCCGTAGA 58.601 45.455 0.00 0.00 0.00 2.59
691 716 2.484264 CCTTTCTTCAAACAGGCCGTAG 59.516 50.000 0.00 0.00 0.00 3.51
694 719 1.537202 CTCCTTTCTTCAAACAGGCCG 59.463 52.381 0.00 0.00 0.00 6.13
696 721 1.956477 TGCTCCTTTCTTCAAACAGGC 59.044 47.619 0.00 0.00 0.00 4.85
815 878 1.219664 GCAATGTGCACATGGGCAT 59.780 52.632 34.25 19.55 46.92 4.40
869 932 2.044650 CGGTAGGGGTGGAGTCGA 60.045 66.667 0.00 0.00 0.00 4.20
924 987 4.357947 GCAGAGGCGACGTGTCCA 62.358 66.667 0.00 0.00 0.00 4.02
1167 1249 3.424105 AATGGAGGGGCAGAGGGC 61.424 66.667 0.00 0.00 43.74 5.19
1217 1299 0.320160 GTCCTCAAACCCTAACGCGT 60.320 55.000 5.58 5.58 0.00 6.01
1399 1481 6.073447 ACCCCCTCTTTTGTTCAAATTTTT 57.927 33.333 0.00 0.00 0.00 1.94
1400 1482 5.708736 ACCCCCTCTTTTGTTCAAATTTT 57.291 34.783 0.00 0.00 0.00 1.82
1401 1483 5.708736 AACCCCCTCTTTTGTTCAAATTT 57.291 34.783 0.00 0.00 0.00 1.82
1402 1484 5.397447 GGAAACCCCCTCTTTTGTTCAAATT 60.397 40.000 0.00 0.00 0.00 1.82
1403 1485 4.102524 GGAAACCCCCTCTTTTGTTCAAAT 59.897 41.667 0.00 0.00 0.00 2.32
1404 1486 3.452990 GGAAACCCCCTCTTTTGTTCAAA 59.547 43.478 0.00 0.00 0.00 2.69
1405 1487 3.035363 GGAAACCCCCTCTTTTGTTCAA 58.965 45.455 0.00 0.00 0.00 2.69
1406 1488 2.673258 GGAAACCCCCTCTTTTGTTCA 58.327 47.619 0.00 0.00 0.00 3.18
1420 1502 7.309560 TTTCTTTAATGAAATCGGAGGGAAACC 60.310 37.037 11.39 0.00 39.84 3.27
1421 1503 6.753107 TCTTTAATGAAATCGGAGGGAAAC 57.247 37.500 0.00 0.00 0.00 2.78
1422 1504 7.231722 TGTTTCTTTAATGAAATCGGAGGGAAA 59.768 33.333 16.78 0.00 38.09 3.13
1423 1505 6.717540 TGTTTCTTTAATGAAATCGGAGGGAA 59.282 34.615 16.78 0.00 38.09 3.97
1424 1506 6.150474 GTGTTTCTTTAATGAAATCGGAGGGA 59.850 38.462 16.78 0.00 38.09 4.20
1425 1507 6.322491 GTGTTTCTTTAATGAAATCGGAGGG 58.678 40.000 16.78 0.00 38.09 4.30
1426 1508 6.072175 TGGTGTTTCTTTAATGAAATCGGAGG 60.072 38.462 16.78 0.00 38.09 4.30
1427 1509 6.801862 GTGGTGTTTCTTTAATGAAATCGGAG 59.198 38.462 16.78 0.00 38.09 4.63
1428 1510 6.263392 TGTGGTGTTTCTTTAATGAAATCGGA 59.737 34.615 16.78 3.36 38.09 4.55
1429 1511 6.362283 GTGTGGTGTTTCTTTAATGAAATCGG 59.638 38.462 16.78 0.00 38.09 4.18
1430 1512 6.086241 CGTGTGGTGTTTCTTTAATGAAATCG 59.914 38.462 16.78 10.56 38.09 3.34
1431 1513 7.136119 TCGTGTGGTGTTTCTTTAATGAAATC 58.864 34.615 16.78 13.22 38.09 2.17
1432 1514 7.033530 TCGTGTGGTGTTTCTTTAATGAAAT 57.966 32.000 16.78 0.00 38.09 2.17
1433 1515 6.438259 TCGTGTGGTGTTTCTTTAATGAAA 57.562 33.333 11.39 11.39 34.05 2.69
1434 1516 6.438259 TTCGTGTGGTGTTTCTTTAATGAA 57.562 33.333 0.00 0.00 0.00 2.57
1435 1517 6.127980 TGTTTCGTGTGGTGTTTCTTTAATGA 60.128 34.615 0.00 0.00 0.00 2.57
1436 1518 6.030849 TGTTTCGTGTGGTGTTTCTTTAATG 58.969 36.000 0.00 0.00 0.00 1.90
1437 1519 6.197364 TGTTTCGTGTGGTGTTTCTTTAAT 57.803 33.333 0.00 0.00 0.00 1.40
1438 1520 5.624344 TGTTTCGTGTGGTGTTTCTTTAA 57.376 34.783 0.00 0.00 0.00 1.52
1439 1521 5.181622 ACTTGTTTCGTGTGGTGTTTCTTTA 59.818 36.000 0.00 0.00 0.00 1.85
1440 1522 4.022676 ACTTGTTTCGTGTGGTGTTTCTTT 60.023 37.500 0.00 0.00 0.00 2.52
1441 1523 3.504520 ACTTGTTTCGTGTGGTGTTTCTT 59.495 39.130 0.00 0.00 0.00 2.52
1442 1524 3.078837 ACTTGTTTCGTGTGGTGTTTCT 58.921 40.909 0.00 0.00 0.00 2.52
1443 1525 3.481112 ACTTGTTTCGTGTGGTGTTTC 57.519 42.857 0.00 0.00 0.00 2.78
1444 1526 3.366577 GGAACTTGTTTCGTGTGGTGTTT 60.367 43.478 0.00 0.00 34.67 2.83
1445 1527 2.162809 GGAACTTGTTTCGTGTGGTGTT 59.837 45.455 0.00 0.00 34.67 3.32
1446 1528 1.741145 GGAACTTGTTTCGTGTGGTGT 59.259 47.619 0.00 0.00 34.67 4.16
1447 1529 1.740585 TGGAACTTGTTTCGTGTGGTG 59.259 47.619 0.00 0.00 34.67 4.17
1448 1530 2.116827 TGGAACTTGTTTCGTGTGGT 57.883 45.000 0.00 0.00 34.67 4.16
1449 1531 3.119637 AGTTTGGAACTTGTTTCGTGTGG 60.120 43.478 0.00 0.00 39.04 4.17
1450 1532 4.091453 AGTTTGGAACTTGTTTCGTGTG 57.909 40.909 0.00 0.00 39.04 3.82
1461 1543 5.019785 ACGACTGTTCTAAGTTTGGAACT 57.980 39.130 17.98 3.49 45.45 3.01
1462 1544 5.176406 GGTACGACTGTTCTAAGTTTGGAAC 59.824 44.000 12.48 12.48 45.44 3.62
1463 1545 5.163426 TGGTACGACTGTTCTAAGTTTGGAA 60.163 40.000 0.00 0.00 0.00 3.53
1464 1546 4.341806 TGGTACGACTGTTCTAAGTTTGGA 59.658 41.667 0.00 0.00 0.00 3.53
1465 1547 4.624015 TGGTACGACTGTTCTAAGTTTGG 58.376 43.478 0.00 0.00 0.00 3.28
1466 1548 5.970879 GTTGGTACGACTGTTCTAAGTTTG 58.029 41.667 0.00 0.00 0.00 2.93
1494 1576 5.711036 CCCTGGGTAGTAGTAGCTGTAATAG 59.289 48.000 3.97 0.00 0.00 1.73
1495 1577 5.373555 TCCCTGGGTAGTAGTAGCTGTAATA 59.626 44.000 13.56 0.00 0.00 0.98
1496 1578 4.169461 TCCCTGGGTAGTAGTAGCTGTAAT 59.831 45.833 13.56 0.00 0.00 1.89
1497 1579 3.528905 TCCCTGGGTAGTAGTAGCTGTAA 59.471 47.826 13.56 0.00 0.00 2.41
1498 1580 3.125656 TCCCTGGGTAGTAGTAGCTGTA 58.874 50.000 13.56 0.00 0.00 2.74
1499 1581 1.928077 TCCCTGGGTAGTAGTAGCTGT 59.072 52.381 13.56 0.00 0.00 4.40
1500 1582 2.750141 TCCCTGGGTAGTAGTAGCTG 57.250 55.000 13.56 1.17 0.00 4.24
1501 1583 2.091222 CCTTCCCTGGGTAGTAGTAGCT 60.091 54.545 17.02 0.00 0.00 3.32
1502 1584 2.317973 CCTTCCCTGGGTAGTAGTAGC 58.682 57.143 17.02 0.00 0.00 3.58
1503 1585 3.684408 ACCTTCCCTGGGTAGTAGTAG 57.316 52.381 17.02 5.07 35.00 2.57
1504 1586 3.599698 AGAACCTTCCCTGGGTAGTAGTA 59.400 47.826 17.02 0.00 35.83 1.82
1505 1587 2.386113 AGAACCTTCCCTGGGTAGTAGT 59.614 50.000 17.02 6.98 35.83 2.73
1506 1588 3.117552 AGAACCTTCCCTGGGTAGTAG 57.882 52.381 17.02 6.39 35.83 2.57
1507 1589 3.599698 ACTAGAACCTTCCCTGGGTAGTA 59.400 47.826 17.02 3.50 35.83 1.82
1508 1590 2.386113 ACTAGAACCTTCCCTGGGTAGT 59.614 50.000 17.02 10.62 35.83 2.73
1509 1591 3.117552 ACTAGAACCTTCCCTGGGTAG 57.882 52.381 13.56 12.79 35.83 3.18
1510 1592 4.913154 ATACTAGAACCTTCCCTGGGTA 57.087 45.455 13.56 1.39 35.83 3.69
1511 1593 3.797671 ATACTAGAACCTTCCCTGGGT 57.202 47.619 13.56 0.00 38.94 4.51
1512 1594 4.037927 TGAATACTAGAACCTTCCCTGGG 58.962 47.826 6.33 6.33 0.00 4.45
1513 1595 5.675538 CTTGAATACTAGAACCTTCCCTGG 58.324 45.833 0.00 0.00 0.00 4.45
1514 1596 5.104735 AGCTTGAATACTAGAACCTTCCCTG 60.105 44.000 0.00 0.00 0.00 4.45
1515 1597 5.033522 AGCTTGAATACTAGAACCTTCCCT 58.966 41.667 0.00 0.00 0.00 4.20
1516 1598 5.360649 AGCTTGAATACTAGAACCTTCCC 57.639 43.478 0.00 0.00 0.00 3.97
1517 1599 7.114866 AGTAGCTTGAATACTAGAACCTTCC 57.885 40.000 0.00 0.00 31.71 3.46
1526 1608 7.406031 AACTGCACTAGTAGCTTGAATACTA 57.594 36.000 15.28 0.00 39.18 1.82
1527 1609 5.923733 ACTGCACTAGTAGCTTGAATACT 57.076 39.130 15.28 0.00 38.04 2.12
1528 1610 7.921214 TGATAACTGCACTAGTAGCTTGAATAC 59.079 37.037 15.28 0.00 39.18 1.89
1529 1611 8.007405 TGATAACTGCACTAGTAGCTTGAATA 57.993 34.615 15.28 9.24 39.18 1.75
1530 1612 6.878317 TGATAACTGCACTAGTAGCTTGAAT 58.122 36.000 15.28 6.98 39.18 2.57
1531 1613 6.152831 TCTGATAACTGCACTAGTAGCTTGAA 59.847 38.462 15.28 3.56 39.18 2.69
1532 1614 5.652452 TCTGATAACTGCACTAGTAGCTTGA 59.348 40.000 15.28 1.09 39.18 3.02
1533 1615 5.895928 TCTGATAACTGCACTAGTAGCTTG 58.104 41.667 15.28 11.42 39.18 4.01
1534 1616 6.531503 TTCTGATAACTGCACTAGTAGCTT 57.468 37.500 15.28 7.52 39.18 3.74
1535 1617 6.322456 TCATTCTGATAACTGCACTAGTAGCT 59.678 38.462 15.28 0.00 39.18 3.32
1536 1618 6.507900 TCATTCTGATAACTGCACTAGTAGC 58.492 40.000 0.00 2.56 39.18 3.58
1537 1619 7.168972 GCTTCATTCTGATAACTGCACTAGTAG 59.831 40.741 0.00 0.00 39.18 2.57
1538 1620 6.980978 GCTTCATTCTGATAACTGCACTAGTA 59.019 38.462 0.00 0.00 39.18 1.82
1539 1621 5.814705 GCTTCATTCTGATAACTGCACTAGT 59.185 40.000 0.00 0.00 42.89 2.57
1540 1622 5.814188 TGCTTCATTCTGATAACTGCACTAG 59.186 40.000 0.00 0.00 0.00 2.57
1541 1623 5.733676 TGCTTCATTCTGATAACTGCACTA 58.266 37.500 0.00 0.00 0.00 2.74
1542 1624 4.582869 TGCTTCATTCTGATAACTGCACT 58.417 39.130 0.00 0.00 0.00 4.40
1543 1625 4.730035 GCTGCTTCATTCTGATAACTGCAC 60.730 45.833 0.00 0.00 0.00 4.57
1544 1626 3.376234 GCTGCTTCATTCTGATAACTGCA 59.624 43.478 0.00 0.00 0.00 4.41
1545 1627 3.545624 CGCTGCTTCATTCTGATAACTGC 60.546 47.826 0.00 0.00 0.00 4.40
1546 1628 3.545624 GCGCTGCTTCATTCTGATAACTG 60.546 47.826 0.00 0.00 0.00 3.16
1547 1629 2.611292 GCGCTGCTTCATTCTGATAACT 59.389 45.455 0.00 0.00 0.00 2.24
1548 1630 2.352651 TGCGCTGCTTCATTCTGATAAC 59.647 45.455 9.73 0.00 0.00 1.89
1549 1631 2.631267 TGCGCTGCTTCATTCTGATAA 58.369 42.857 9.73 0.00 0.00 1.75
1550 1632 2.314323 TGCGCTGCTTCATTCTGATA 57.686 45.000 9.73 0.00 0.00 2.15
1551 1633 1.456296 TTGCGCTGCTTCATTCTGAT 58.544 45.000 9.73 0.00 0.00 2.90
1552 1634 1.456296 ATTGCGCTGCTTCATTCTGA 58.544 45.000 9.73 0.00 0.00 3.27
1553 1635 2.273370 AATTGCGCTGCTTCATTCTG 57.727 45.000 9.73 0.00 0.00 3.02
1554 1636 2.223112 CGTAATTGCGCTGCTTCATTCT 60.223 45.455 9.73 0.00 0.00 2.40
1555 1637 2.104144 CGTAATTGCGCTGCTTCATTC 58.896 47.619 9.73 0.00 0.00 2.67
1556 1638 1.468520 ACGTAATTGCGCTGCTTCATT 59.531 42.857 16.17 0.07 34.88 2.57
1557 1639 1.062587 GACGTAATTGCGCTGCTTCAT 59.937 47.619 16.17 0.00 34.88 2.57
1558 1640 0.442310 GACGTAATTGCGCTGCTTCA 59.558 50.000 16.17 0.00 34.88 3.02
1559 1641 0.721718 AGACGTAATTGCGCTGCTTC 59.278 50.000 16.17 5.67 34.88 3.86
1560 1642 0.721718 GAGACGTAATTGCGCTGCTT 59.278 50.000 16.17 1.64 34.88 3.91
1561 1643 1.413767 CGAGACGTAATTGCGCTGCT 61.414 55.000 16.17 10.65 34.88 4.24
1562 1644 1.013323 CGAGACGTAATTGCGCTGC 60.013 57.895 16.17 5.94 34.88 5.25
1563 1645 0.713883 AACGAGACGTAATTGCGCTG 59.286 50.000 16.17 5.88 39.99 5.18
1564 1646 1.425412 AAACGAGACGTAATTGCGCT 58.575 45.000 16.17 13.38 39.99 5.92
1565 1647 2.221799 AAAACGAGACGTAATTGCGC 57.778 45.000 16.17 0.00 39.99 6.09
1566 1648 3.537806 ACAAAAACGAGACGTAATTGCG 58.462 40.909 14.67 14.67 39.99 4.85
1662 1746 7.147915 GCTATAGCTAGAACATTCCTAGATGCT 60.148 40.741 17.75 0.00 36.58 3.79
1667 1751 7.040062 AGTGTGCTATAGCTAGAACATTCCTAG 60.040 40.741 24.61 0.00 43.87 3.02
1694 1778 2.450476 GAGGCAATTTCACCCTCACAT 58.550 47.619 0.00 0.00 43.63 3.21
1726 1810 5.420409 ACTAGAATGTAGCAAGTAGGCAAC 58.580 41.667 0.00 0.00 35.83 4.17
1817 2069 4.481368 TGCCCAGTTCATAACTTCGTAT 57.519 40.909 0.00 0.00 40.46 3.06
1864 2116 1.135859 GCAGTTCTCATGTGAAAGCCG 60.136 52.381 18.30 7.98 0.00 5.52
1870 2122 3.370846 CCCATTAGGCAGTTCTCATGTGA 60.371 47.826 0.00 0.00 0.00 3.58
1902 2154 8.265055 GCTAAATGGGATAGTAGTATTGCCATA 58.735 37.037 11.00 0.00 0.00 2.74
1933 2185 1.056660 GTGAAGGGAGTGGAACCTCA 58.943 55.000 0.00 0.00 37.80 3.86
1951 2203 4.985538 TCAACTGAGAAGGCCAATTAAGT 58.014 39.130 5.01 0.00 0.00 2.24
1960 2212 2.399916 ATCTGCTCAACTGAGAAGGC 57.600 50.000 13.73 0.00 45.91 4.35
1969 2221 7.483059 GCATAGTTTTACTCAAATCTGCTCAAC 59.517 37.037 0.00 0.00 0.00 3.18
1975 2227 9.683069 AAACAAGCATAGTTTTACTCAAATCTG 57.317 29.630 0.00 0.00 35.81 2.90
1990 2242 6.128445 CCACTGTACAGAGAAAACAAGCATAG 60.128 42.308 29.30 0.32 0.00 2.23
2076 2328 7.444487 ACCTACAAAAGTAAAGCACCTCTAAAG 59.556 37.037 0.00 0.00 0.00 1.85
2079 2331 6.429521 ACCTACAAAAGTAAAGCACCTCTA 57.570 37.500 0.00 0.00 0.00 2.43
2116 2368 7.226128 GCCCCAATACACAATACTACTCTTAAC 59.774 40.741 0.00 0.00 0.00 2.01
2387 2834 3.841255 CTGAATTAGTATCCCTCCCTCCC 59.159 52.174 0.00 0.00 0.00 4.30
2388 2835 4.494591 ACTGAATTAGTATCCCTCCCTCC 58.505 47.826 0.00 0.00 38.04 4.30
2389 2836 5.602978 TGAACTGAATTAGTATCCCTCCCTC 59.397 44.000 0.00 0.00 39.18 4.30
2420 2867 8.570096 AAATATTGCATCAGAAATGTCATTCG 57.430 30.769 0.00 0.00 34.46 3.34
2469 2916 3.756082 ATTCCCATTAGTGCTTCCCAA 57.244 42.857 0.00 0.00 0.00 4.12
2542 2989 2.207590 GCTAGCTTTATTTACGGCCGT 58.792 47.619 36.01 36.01 0.00 5.68
2665 3112 4.142403 GCATCAACCCGAAATTTCAGATCA 60.142 41.667 17.99 0.00 0.00 2.92
2666 3113 4.142403 TGCATCAACCCGAAATTTCAGATC 60.142 41.667 17.99 7.55 0.00 2.75
2782 3229 8.321353 ACTGTAAATCACTCTGAACAATATCCA 58.679 33.333 0.00 0.00 0.00 3.41
2790 3237 5.698545 AGAGCAACTGTAAATCACTCTGAAC 59.301 40.000 0.00 0.00 32.06 3.18
2792 3239 5.474578 AGAGCAACTGTAAATCACTCTGA 57.525 39.130 0.00 0.00 32.06 3.27
2944 3392 4.622740 GGCAGCATTTTCTGTAATGAACAC 59.377 41.667 0.00 0.00 37.65 3.32
2966 3414 7.663081 AGTGCAGATATTCACCATATGTAAAGG 59.337 37.037 1.24 0.00 33.90 3.11
3196 3644 8.396272 TGTCTTAGAAATGGAAGAAAAGAAGG 57.604 34.615 0.00 0.00 0.00 3.46
3247 3695 5.121221 ACGTTGGTTTCAAAATGGATCTC 57.879 39.130 0.00 0.00 34.28 2.75
3249 3697 4.865776 TGACGTTGGTTTCAAAATGGATC 58.134 39.130 0.00 0.00 34.28 3.36
3268 3716 9.820229 TTTGTAGTTCATCGAACAAATATTGAC 57.180 29.630 9.36 0.00 44.11 3.18
3326 3774 3.042682 TGCCGTCAATAGGATCCCTAAA 58.957 45.455 8.55 0.00 39.77 1.85
3377 3825 1.606668 GTGAGATAGTCCTCTGCCTCG 59.393 57.143 0.00 0.00 34.38 4.63
3460 3908 9.577110 TCAAATGCTTAGATGCTTTATTTTCTG 57.423 29.630 0.00 0.00 31.49 3.02
3470 3918 3.054139 TGGAGGTCAAATGCTTAGATGCT 60.054 43.478 0.00 0.00 0.00 3.79
3476 3924 6.121776 TCTAACTTGGAGGTCAAATGCTTA 57.878 37.500 0.00 0.00 34.56 3.09
3499 3947 9.743581 TGCATGGATTACAAGATTACATGATAT 57.256 29.630 0.00 0.00 37.10 1.63
3503 3951 6.263842 ACCTGCATGGATTACAAGATTACATG 59.736 38.462 8.91 0.00 39.71 3.21
3510 3958 4.299586 TGAACCTGCATGGATTACAAGA 57.700 40.909 8.91 0.00 39.71 3.02
3561 4009 4.039730 AGCTTATACATCCTGGCTACACAG 59.960 45.833 0.00 0.00 38.21 3.66
3570 4018 6.441093 TTTGCTTTCAGCTTATACATCCTG 57.559 37.500 0.00 0.00 42.97 3.86
3573 4021 8.400947 TCAGATTTTGCTTTCAGCTTATACATC 58.599 33.333 0.00 0.00 42.97 3.06
3582 4030 4.248691 ACCTTCAGATTTTGCTTTCAGC 57.751 40.909 0.00 0.00 42.82 4.26
3643 4091 9.905713 TGCAAAGACCAATTATTCTATTAGAGT 57.094 29.630 0.00 0.00 0.00 3.24
3649 4097 7.786464 AGGGAATGCAAAGACCAATTATTCTAT 59.214 33.333 0.00 0.00 0.00 1.98
3655 4125 4.222588 CCAAGGGAATGCAAAGACCAATTA 59.777 41.667 0.00 0.00 0.00 1.40
3656 4126 3.008266 CCAAGGGAATGCAAAGACCAATT 59.992 43.478 0.00 0.00 0.00 2.32
3657 4127 2.568509 CCAAGGGAATGCAAAGACCAAT 59.431 45.455 0.00 0.00 0.00 3.16
3661 4131 2.519013 AGACCAAGGGAATGCAAAGAC 58.481 47.619 0.00 0.00 0.00 3.01
3666 4136 4.934356 AGATTTAAGACCAAGGGAATGCA 58.066 39.130 0.00 0.00 0.00 3.96
3667 4137 5.418840 TCAAGATTTAAGACCAAGGGAATGC 59.581 40.000 0.00 0.00 0.00 3.56
3668 4138 7.340232 TCATCAAGATTTAAGACCAAGGGAATG 59.660 37.037 0.00 0.00 0.00 2.67
3669 4139 7.413446 TCATCAAGATTTAAGACCAAGGGAAT 58.587 34.615 0.00 0.00 0.00 3.01
3687 4157 6.094464 TGCCACATTCTTAACTCATCATCAAG 59.906 38.462 0.00 0.00 0.00 3.02
3704 4174 6.209986 TGAGAAAGAATGAGAATTGCCACATT 59.790 34.615 0.00 0.00 35.99 2.71
3708 4178 6.653526 TTTGAGAAAGAATGAGAATTGCCA 57.346 33.333 0.00 0.00 0.00 4.92
3754 4224 7.620491 TGGTACAGAGGGAGTACATAATTAACA 59.380 37.037 0.00 0.00 42.73 2.41
3755 4225 8.015185 TGGTACAGAGGGAGTACATAATTAAC 57.985 38.462 0.00 0.00 42.73 2.01
3758 4228 7.504926 TTTGGTACAGAGGGAGTACATAATT 57.495 36.000 0.00 0.00 42.73 1.40
3761 4231 7.504926 AATTTTGGTACAGAGGGAGTACATA 57.495 36.000 0.00 0.00 42.73 2.29
3762 4232 6.388619 AATTTTGGTACAGAGGGAGTACAT 57.611 37.500 0.00 0.00 42.73 2.29
3763 4233 5.836024 AATTTTGGTACAGAGGGAGTACA 57.164 39.130 0.00 0.00 42.73 2.90
3764 4234 8.625786 TTTAAATTTTGGTACAGAGGGAGTAC 57.374 34.615 0.00 0.00 42.39 2.73
3766 4236 7.447545 GTCTTTAAATTTTGGTACAGAGGGAGT 59.552 37.037 0.00 0.00 42.39 3.85
3767 4237 7.360946 CGTCTTTAAATTTTGGTACAGAGGGAG 60.361 40.741 0.00 0.00 42.39 4.30
3768 4238 6.428771 CGTCTTTAAATTTTGGTACAGAGGGA 59.571 38.462 0.00 0.00 42.39 4.20
3769 4239 6.206048 ACGTCTTTAAATTTTGGTACAGAGGG 59.794 38.462 0.00 0.00 42.39 4.30
3770 4240 7.198306 ACGTCTTTAAATTTTGGTACAGAGG 57.802 36.000 0.00 0.00 42.39 3.69
3771 4241 9.511144 AAAACGTCTTTAAATTTTGGTACAGAG 57.489 29.630 0.00 0.00 42.39 3.35
3772 4242 9.857957 AAAAACGTCTTTAAATTTTGGTACAGA 57.142 25.926 0.00 0.00 42.39 3.41
3803 4273 7.321153 ACGCTTTTTGACACTATCATAGTAGT 58.679 34.615 0.00 0.00 37.11 2.73
3804 4274 7.702772 AGACGCTTTTTGACACTATCATAGTAG 59.297 37.037 0.00 0.00 37.11 2.57
3805 4275 7.544622 AGACGCTTTTTGACACTATCATAGTA 58.455 34.615 0.00 0.00 37.11 1.82
3806 4276 6.398918 AGACGCTTTTTGACACTATCATAGT 58.601 36.000 0.00 0.00 37.11 2.12
3807 4277 6.893958 AGACGCTTTTTGACACTATCATAG 57.106 37.500 0.00 0.00 37.11 2.23
3808 4278 8.766000 TTAAGACGCTTTTTGACACTATCATA 57.234 30.769 0.00 0.00 37.11 2.15
3809 4279 7.667043 TTAAGACGCTTTTTGACACTATCAT 57.333 32.000 0.00 0.00 37.11 2.45
3810 4280 7.485418 TTTAAGACGCTTTTTGACACTATCA 57.515 32.000 0.00 0.00 34.65 2.15
3811 4281 8.950403 AATTTAAGACGCTTTTTGACACTATC 57.050 30.769 0.00 0.00 0.00 2.08
3812 4282 9.744468 AAAATTTAAGACGCTTTTTGACACTAT 57.256 25.926 0.00 0.00 0.00 2.12
3813 4283 9.015577 CAAAATTTAAGACGCTTTTTGACACTA 57.984 29.630 0.00 0.00 38.79 2.74
3814 4284 7.757624 TCAAAATTTAAGACGCTTTTTGACACT 59.242 29.630 5.33 0.00 39.84 3.55
3815 4285 7.890763 TCAAAATTTAAGACGCTTTTTGACAC 58.109 30.769 5.33 0.00 39.84 3.67
3816 4286 8.641499 ATCAAAATTTAAGACGCTTTTTGACA 57.359 26.923 10.30 0.00 44.41 3.58
3819 4289 9.956797 CCATATCAAAATTTAAGACGCTTTTTG 57.043 29.630 0.00 0.00 38.17 2.44
3820 4290 9.921637 TCCATATCAAAATTTAAGACGCTTTTT 57.078 25.926 0.00 0.00 0.00 1.94
3821 4291 9.921637 TTCCATATCAAAATTTAAGACGCTTTT 57.078 25.926 0.00 0.00 0.00 2.27
3822 4292 9.573133 CTTCCATATCAAAATTTAAGACGCTTT 57.427 29.630 0.00 0.00 0.00 3.51
3823 4293 8.190784 CCTTCCATATCAAAATTTAAGACGCTT 58.809 33.333 0.00 0.00 0.00 4.68
3824 4294 7.556275 TCCTTCCATATCAAAATTTAAGACGCT 59.444 33.333 0.00 0.00 0.00 5.07
3825 4295 7.703328 TCCTTCCATATCAAAATTTAAGACGC 58.297 34.615 0.00 0.00 0.00 5.19
3826 4296 8.893727 ACTCCTTCCATATCAAAATTTAAGACG 58.106 33.333 0.00 0.00 0.00 4.18
3834 4304 9.799106 CCAGTAATACTCCTTCCATATCAAAAT 57.201 33.333 0.00 0.00 0.00 1.82
3835 4305 8.778059 ACCAGTAATACTCCTTCCATATCAAAA 58.222 33.333 0.00 0.00 0.00 2.44
3836 4306 8.331931 ACCAGTAATACTCCTTCCATATCAAA 57.668 34.615 0.00 0.00 0.00 2.69
3837 4307 7.931015 ACCAGTAATACTCCTTCCATATCAA 57.069 36.000 0.00 0.00 0.00 2.57
3838 4308 7.202093 CCAACCAGTAATACTCCTTCCATATCA 60.202 40.741 0.00 0.00 0.00 2.15
3839 4309 7.162082 CCAACCAGTAATACTCCTTCCATATC 58.838 42.308 0.00 0.00 0.00 1.63
3840 4310 6.619852 ACCAACCAGTAATACTCCTTCCATAT 59.380 38.462 0.00 0.00 0.00 1.78
3841 4311 5.968167 ACCAACCAGTAATACTCCTTCCATA 59.032 40.000 0.00 0.00 0.00 2.74
3842 4312 4.788617 ACCAACCAGTAATACTCCTTCCAT 59.211 41.667 0.00 0.00 0.00 3.41
3843 4313 4.019681 CACCAACCAGTAATACTCCTTCCA 60.020 45.833 0.00 0.00 0.00 3.53
3844 4314 4.514401 CACCAACCAGTAATACTCCTTCC 58.486 47.826 0.00 0.00 0.00 3.46
3845 4315 4.224370 TCCACCAACCAGTAATACTCCTTC 59.776 45.833 0.00 0.00 0.00 3.46
3846 4316 4.172807 TCCACCAACCAGTAATACTCCTT 58.827 43.478 0.00 0.00 0.00 3.36
3847 4317 3.775316 CTCCACCAACCAGTAATACTCCT 59.225 47.826 0.00 0.00 0.00 3.69
3848 4318 3.518303 ACTCCACCAACCAGTAATACTCC 59.482 47.826 0.00 0.00 0.00 3.85
3849 4319 4.820894 ACTCCACCAACCAGTAATACTC 57.179 45.455 0.00 0.00 0.00 2.59
3850 4320 5.163131 ACAAACTCCACCAACCAGTAATACT 60.163 40.000 0.00 0.00 0.00 2.12
3851 4321 5.048991 CACAAACTCCACCAACCAGTAATAC 60.049 44.000 0.00 0.00 0.00 1.89
3860 4330 3.805207 ACTACTCACAAACTCCACCAAC 58.195 45.455 0.00 0.00 0.00 3.77
3874 4344 2.095008 CAGCGCAGAGAAAGACTACTCA 60.095 50.000 11.47 0.00 35.83 3.41
3876 4346 1.889829 ACAGCGCAGAGAAAGACTACT 59.110 47.619 11.47 0.00 0.00 2.57
3877 4347 2.094957 AGACAGCGCAGAGAAAGACTAC 60.095 50.000 11.47 0.00 0.00 2.73
3878 4348 2.095008 CAGACAGCGCAGAGAAAGACTA 60.095 50.000 11.47 0.00 0.00 2.59
3879 4349 0.965439 AGACAGCGCAGAGAAAGACT 59.035 50.000 11.47 0.00 0.00 3.24
3880 4350 1.066914 CAGACAGCGCAGAGAAAGAC 58.933 55.000 11.47 0.00 0.00 3.01
3882 4352 2.007360 ATCAGACAGCGCAGAGAAAG 57.993 50.000 11.47 0.00 0.00 2.62
3885 4355 0.738762 GCAATCAGACAGCGCAGAGA 60.739 55.000 11.47 3.36 0.00 3.10
3886 4356 1.017701 TGCAATCAGACAGCGCAGAG 61.018 55.000 11.47 0.64 0.00 3.35
3887 4357 1.004679 TGCAATCAGACAGCGCAGA 60.005 52.632 11.47 0.00 0.00 4.26
3890 4360 2.758089 CCCTGCAATCAGACAGCGC 61.758 63.158 0.00 0.00 42.95 5.92
3891 4361 2.110967 CCCCTGCAATCAGACAGCG 61.111 63.158 0.00 0.00 42.95 5.18
3896 4397 3.776969 CCTATATAGCCCCTGCAATCAGA 59.223 47.826 4.04 0.00 42.95 3.27
3915 4416 5.152306 TCAATACTTCTAGGGCCTTCCTA 57.848 43.478 13.45 0.00 45.98 2.94
3924 4425 4.333926 GCAGGTGCTTTCAATACTTCTAGG 59.666 45.833 0.00 0.00 38.21 3.02
3954 4455 5.488919 AGGAGATCATGTTTTACCCTCAGAA 59.511 40.000 0.00 0.00 0.00 3.02
3984 4486 4.026052 CCAAGGAATTAACAGGAGCCAAT 58.974 43.478 0.00 0.00 0.00 3.16
3988 4490 1.751351 GCCCAAGGAATTAACAGGAGC 59.249 52.381 0.00 0.00 0.00 4.70
3989 4491 3.085952 TGCCCAAGGAATTAACAGGAG 57.914 47.619 0.00 0.00 0.00 3.69
3992 4494 4.806640 ACATTGCCCAAGGAATTAACAG 57.193 40.909 0.00 0.00 0.00 3.16
4000 4502 3.576550 GGAAACTTAACATTGCCCAAGGA 59.423 43.478 0.00 0.00 0.00 3.36
4022 4524 9.241317 CTTCTTGTGCCTGCAAAATATAAATAG 57.759 33.333 0.00 0.00 0.00 1.73
4027 4529 4.142182 GCCTTCTTGTGCCTGCAAAATATA 60.142 41.667 0.00 0.00 0.00 0.86
4039 4541 1.160137 ATCGACTTGCCTTCTTGTGC 58.840 50.000 0.00 0.00 0.00 4.57
4052 4554 7.353525 AGGATATGATATCTCTCCAATCGACT 58.646 38.462 11.85 0.00 0.00 4.18
4073 4575 6.615726 TCAAAGTATAACCTCTAGCCAAGGAT 59.384 38.462 3.05 0.00 37.35 3.24
4077 4579 8.090788 AGATTCAAAGTATAACCTCTAGCCAA 57.909 34.615 0.00 0.00 0.00 4.52
4079 4581 8.966069 AAAGATTCAAAGTATAACCTCTAGCC 57.034 34.615 0.00 0.00 0.00 3.93
4109 4611 8.503573 TGGTAGAATACTCCAGAGAAGATTAGA 58.496 37.037 0.70 0.00 42.51 2.10
4125 4627 5.579564 AGAACCGTCTTCTGGTAGAATAC 57.420 43.478 0.00 0.00 39.29 1.89
4126 4628 5.105473 CCAAGAACCGTCTTCTGGTAGAATA 60.105 44.000 0.00 0.00 42.45 1.75
4130 4632 2.561419 TCCAAGAACCGTCTTCTGGTAG 59.439 50.000 0.00 0.00 42.45 3.18
4136 4638 6.205101 TCTACTAATCCAAGAACCGTCTTC 57.795 41.667 0.00 0.00 42.45 2.87
4140 4642 6.766429 ACTTTTCTACTAATCCAAGAACCGT 58.234 36.000 0.00 0.00 0.00 4.83
4142 4644 9.722184 AGTAACTTTTCTACTAATCCAAGAACC 57.278 33.333 0.00 0.00 0.00 3.62
4148 4650 9.162764 GCATGAAGTAACTTTTCTACTAATCCA 57.837 33.333 0.00 0.00 0.00 3.41
4153 4655 8.896320 TGTTGCATGAAGTAACTTTTCTACTA 57.104 30.769 0.00 0.00 42.52 1.82
4154 4656 7.801716 TGTTGCATGAAGTAACTTTTCTACT 57.198 32.000 0.00 0.00 42.52 2.57
4155 4657 7.750903 GGATGTTGCATGAAGTAACTTTTCTAC 59.249 37.037 0.00 0.00 42.52 2.59
4156 4658 7.665559 AGGATGTTGCATGAAGTAACTTTTCTA 59.334 33.333 0.00 0.00 42.52 2.10
4157 4659 6.491403 AGGATGTTGCATGAAGTAACTTTTCT 59.509 34.615 0.00 0.00 42.52 2.52
4158 4660 6.681777 AGGATGTTGCATGAAGTAACTTTTC 58.318 36.000 0.00 0.00 42.52 2.29
4160 4662 7.168219 TCTAGGATGTTGCATGAAGTAACTTT 58.832 34.615 0.00 0.00 42.52 2.66
4181 4689 8.853345 GCAATTAACAAACAACATGACATCTAG 58.147 33.333 0.00 0.00 0.00 2.43
4184 4692 7.642071 AGCAATTAACAAACAACATGACATC 57.358 32.000 0.00 0.00 0.00 3.06
4255 4764 5.656859 AGGAGGGGAAATGTAAAAGCATAAC 59.343 40.000 0.00 0.00 0.00 1.89
4258 4767 4.337264 AGGAGGGGAAATGTAAAAGCAT 57.663 40.909 0.00 0.00 0.00 3.79
4261 4770 5.827756 AGGTAAGGAGGGGAAATGTAAAAG 58.172 41.667 0.00 0.00 0.00 2.27
4265 4774 3.014807 AGGAGGTAAGGAGGGGAAATGTA 59.985 47.826 0.00 0.00 0.00 2.29
4266 4775 2.206223 GGAGGTAAGGAGGGGAAATGT 58.794 52.381 0.00 0.00 0.00 2.71
4267 4776 2.173569 CAGGAGGTAAGGAGGGGAAATG 59.826 54.545 0.00 0.00 0.00 2.32
4268 4777 2.226170 ACAGGAGGTAAGGAGGGGAAAT 60.226 50.000 0.00 0.00 0.00 2.17
4272 4781 1.282157 CAAACAGGAGGTAAGGAGGGG 59.718 57.143 0.00 0.00 0.00 4.79
4273 4782 2.266279 TCAAACAGGAGGTAAGGAGGG 58.734 52.381 0.00 0.00 0.00 4.30
4274 4783 4.019321 TCATTCAAACAGGAGGTAAGGAGG 60.019 45.833 0.00 0.00 0.00 4.30
4275 4784 5.046304 TCTCATTCAAACAGGAGGTAAGGAG 60.046 44.000 0.00 0.00 0.00 3.69
4281 4808 2.711009 TGGTCTCATTCAAACAGGAGGT 59.289 45.455 0.00 0.00 0.00 3.85
4301 4828 3.380471 TTTAACCAGATCCACCCCATG 57.620 47.619 0.00 0.00 0.00 3.66
4304 4831 3.953542 AGATTTAACCAGATCCACCCC 57.046 47.619 0.00 0.00 0.00 4.95
4305 4832 4.855340 TCAAGATTTAACCAGATCCACCC 58.145 43.478 0.00 0.00 0.00 4.61
4308 4835 8.421249 ACATTTTCAAGATTTAACCAGATCCA 57.579 30.769 0.00 0.00 0.00 3.41
4312 4839 9.362151 AGGTTACATTTTCAAGATTTAACCAGA 57.638 29.630 15.12 0.00 40.10 3.86
4319 4846 9.965824 CACTGTTAGGTTACATTTTCAAGATTT 57.034 29.630 0.00 0.00 0.00 2.17
4320 4847 9.131791 ACACTGTTAGGTTACATTTTCAAGATT 57.868 29.630 0.00 0.00 0.00 2.40
4327 4888 7.308348 CGGATTCACACTGTTAGGTTACATTTT 60.308 37.037 0.00 0.00 0.00 1.82
4343 4904 0.462047 AGGCGGATTCGGATTCACAC 60.462 55.000 0.00 0.00 36.79 3.82
4353 5142 0.743097 ACGTACAGGTAGGCGGATTC 59.257 55.000 0.00 0.00 0.00 2.52
4356 5145 0.895100 AACACGTACAGGTAGGCGGA 60.895 55.000 0.00 0.00 0.00 5.54
4358 5147 1.470098 ACTAACACGTACAGGTAGGCG 59.530 52.381 10.96 0.00 0.00 5.52
4369 5158 4.703575 TGCAATCCTACTCTACTAACACGT 59.296 41.667 0.00 0.00 0.00 4.49
4370 5159 5.244785 TGCAATCCTACTCTACTAACACG 57.755 43.478 0.00 0.00 0.00 4.49
4380 5169 5.193679 AGGGTTTACAATGCAATCCTACTC 58.806 41.667 0.00 0.00 0.00 2.59
4386 5175 4.881920 ACACAAGGGTTTACAATGCAATC 58.118 39.130 0.00 0.00 0.00 2.67
4387 5176 4.953940 ACACAAGGGTTTACAATGCAAT 57.046 36.364 0.00 0.00 0.00 3.56
4388 5177 4.744795 AACACAAGGGTTTACAATGCAA 57.255 36.364 0.00 0.00 0.00 4.08
4389 5178 4.160439 TGAAACACAAGGGTTTACAATGCA 59.840 37.500 0.00 0.00 40.85 3.96
4394 5195 6.094325 CAGTTACTGAAACACAAGGGTTTACA 59.906 38.462 6.50 1.09 40.85 2.41
4883 5684 9.517609 CGAATTCAGCTTATACTAACACTAACT 57.482 33.333 6.22 0.00 0.00 2.24
4896 5697 3.133721 AGGACTCTGCGAATTCAGCTTAT 59.866 43.478 18.44 6.35 34.19 1.73
4902 5703 1.618343 TGTCAGGACTCTGCGAATTCA 59.382 47.619 6.22 0.00 40.69 2.57
4903 5704 2.370281 TGTCAGGACTCTGCGAATTC 57.630 50.000 0.00 0.00 40.69 2.17
4904 5705 2.839486 TTGTCAGGACTCTGCGAATT 57.161 45.000 0.65 0.00 40.69 2.17
4905 5706 2.839486 TTTGTCAGGACTCTGCGAAT 57.161 45.000 0.65 0.00 40.69 3.34
4906 5707 2.300152 AGATTTGTCAGGACTCTGCGAA 59.700 45.455 0.65 0.00 40.69 4.70
4907 5708 1.895798 AGATTTGTCAGGACTCTGCGA 59.104 47.619 0.65 0.00 40.69 5.10
4908 5709 1.998315 CAGATTTGTCAGGACTCTGCG 59.002 52.381 0.65 0.00 40.69 5.18
4909 5710 3.260740 CTCAGATTTGTCAGGACTCTGC 58.739 50.000 10.61 0.00 40.69 4.26
4910 5711 4.533919 ACTCAGATTTGTCAGGACTCTG 57.466 45.455 9.63 9.63 42.21 3.35
4911 5712 5.954752 TGATACTCAGATTTGTCAGGACTCT 59.045 40.000 0.65 0.00 0.00 3.24
4927 5728 8.293699 TCACTGCTTAAGATTAGTGATACTCA 57.706 34.615 22.81 9.14 43.14 3.41
4928 5729 9.587772 TTTCACTGCTTAAGATTAGTGATACTC 57.412 33.333 25.16 1.33 46.11 2.59
4934 5735 9.495754 GCTTATTTTCACTGCTTAAGATTAGTG 57.504 33.333 20.19 20.19 41.34 2.74
4935 5736 9.231297 TGCTTATTTTCACTGCTTAAGATTAGT 57.769 29.630 6.67 4.24 0.00 2.24
4936 5737 9.713740 CTGCTTATTTTCACTGCTTAAGATTAG 57.286 33.333 6.67 3.59 0.00 1.73
4937 5738 8.184192 GCTGCTTATTTTCACTGCTTAAGATTA 58.816 33.333 6.67 0.00 0.00 1.75
4938 5739 7.031975 GCTGCTTATTTTCACTGCTTAAGATT 58.968 34.615 6.67 0.00 0.00 2.40
4940 5741 5.390885 CGCTGCTTATTTTCACTGCTTAAGA 60.391 40.000 6.67 0.00 0.00 2.10
4942 5743 4.215399 ACGCTGCTTATTTTCACTGCTTAA 59.785 37.500 0.00 0.00 0.00 1.85
4946 5747 2.619013 ACGCTGCTTATTTTCACTGC 57.381 45.000 0.00 0.00 0.00 4.40
4959 5760 2.763249 ATTGCTAGCAATAACGCTGC 57.237 45.000 35.77 0.00 43.92 5.25
4984 5785 6.183360 CCTCAATACAAGCAATACACGAATGT 60.183 38.462 0.00 0.00 43.30 2.71
4985 5786 6.194463 CCTCAATACAAGCAATACACGAATG 58.806 40.000 0.00 0.00 0.00 2.67
4986 5787 5.220854 GCCTCAATACAAGCAATACACGAAT 60.221 40.000 0.00 0.00 0.00 3.34
4987 5788 4.094294 GCCTCAATACAAGCAATACACGAA 59.906 41.667 0.00 0.00 0.00 3.85
4988 5789 3.621268 GCCTCAATACAAGCAATACACGA 59.379 43.478 0.00 0.00 0.00 4.35
4989 5790 3.623060 AGCCTCAATACAAGCAATACACG 59.377 43.478 0.00 0.00 0.00 4.49
4990 5791 5.567138 AAGCCTCAATACAAGCAATACAC 57.433 39.130 0.00 0.00 0.00 2.90
4991 5792 6.588719 AAAAGCCTCAATACAAGCAATACA 57.411 33.333 0.00 0.00 0.00 2.29
4992 5793 6.687105 CGTAAAAGCCTCAATACAAGCAATAC 59.313 38.462 0.00 0.00 0.00 1.89
4993 5794 6.183360 CCGTAAAAGCCTCAATACAAGCAATA 60.183 38.462 0.00 0.00 0.00 1.90
4994 5795 5.393027 CCGTAAAAGCCTCAATACAAGCAAT 60.393 40.000 0.00 0.00 0.00 3.56
4995 5796 4.083003 CCGTAAAAGCCTCAATACAAGCAA 60.083 41.667 0.00 0.00 0.00 3.91
4996 5797 3.438781 CCGTAAAAGCCTCAATACAAGCA 59.561 43.478 0.00 0.00 0.00 3.91
4997 5798 3.439129 ACCGTAAAAGCCTCAATACAAGC 59.561 43.478 0.00 0.00 0.00 4.01
4998 5799 4.693566 TCACCGTAAAAGCCTCAATACAAG 59.306 41.667 0.00 0.00 0.00 3.16
4999 5800 4.453136 GTCACCGTAAAAGCCTCAATACAA 59.547 41.667 0.00 0.00 0.00 2.41
5000 5801 3.998341 GTCACCGTAAAAGCCTCAATACA 59.002 43.478 0.00 0.00 0.00 2.29
5001 5802 4.092968 CAGTCACCGTAAAAGCCTCAATAC 59.907 45.833 0.00 0.00 0.00 1.89
5012 5813 3.117794 CGAGAACAACAGTCACCGTAAA 58.882 45.455 0.00 0.00 0.00 2.01
5017 5818 2.822764 AGAACGAGAACAACAGTCACC 58.177 47.619 0.00 0.00 0.00 4.02
5021 5822 4.395959 TGGTAAGAACGAGAACAACAGT 57.604 40.909 0.00 0.00 0.00 3.55
5023 5824 4.513692 CCAATGGTAAGAACGAGAACAACA 59.486 41.667 0.00 0.00 0.00 3.33
5024 5825 4.514066 ACCAATGGTAAGAACGAGAACAAC 59.486 41.667 1.52 0.00 32.11 3.32
5025 5826 4.710324 ACCAATGGTAAGAACGAGAACAA 58.290 39.130 1.52 0.00 32.11 2.83
5028 5829 7.989416 ATTAAACCAATGGTAAGAACGAGAA 57.011 32.000 4.88 0.00 33.12 2.87
5050 5851 8.796475 ACAAGCAGTGACAAATTCAGTATTATT 58.204 29.630 0.00 0.00 35.51 1.40
5051 5852 8.340618 ACAAGCAGTGACAAATTCAGTATTAT 57.659 30.769 0.00 0.00 35.51 1.28
5057 5858 3.316029 TGGACAAGCAGTGACAAATTCAG 59.684 43.478 0.00 0.00 33.71 3.02
5067 5868 3.181493 GCCTGAATATTGGACAAGCAGTG 60.181 47.826 0.00 0.00 0.00 3.66
5068 5869 3.019564 GCCTGAATATTGGACAAGCAGT 58.980 45.455 0.00 0.00 0.00 4.40
5073 5874 3.627395 ACTCGCCTGAATATTGGACAA 57.373 42.857 0.00 0.00 0.00 3.18
5082 5883 0.464036 TTCCGCATACTCGCCTGAAT 59.536 50.000 0.00 0.00 0.00 2.57
5084 5885 1.141019 GTTCCGCATACTCGCCTGA 59.859 57.895 0.00 0.00 0.00 3.86
5098 5899 5.689383 TTGACTGAATAAGCAACAGTTCC 57.311 39.130 0.00 0.00 43.49 3.62
5113 5914 5.221925 ACCTTCTGCCTTTCTATTTGACTGA 60.222 40.000 0.00 0.00 0.00 3.41
5119 5920 4.013050 GCTCACCTTCTGCCTTTCTATTT 58.987 43.478 0.00 0.00 0.00 1.40
5125 5926 0.108585 TTCGCTCACCTTCTGCCTTT 59.891 50.000 0.00 0.00 0.00 3.11
5161 5962 3.300388 TCTACGATTCTTCCAGGCATCT 58.700 45.455 0.00 0.00 0.00 2.90
5182 5983 0.251922 ATGCTTGGGCCAGTGTTGAT 60.252 50.000 6.23 0.00 37.74 2.57
5184 5985 0.320073 CAATGCTTGGGCCAGTGTTG 60.320 55.000 6.23 7.43 37.74 3.33
5200 6001 7.150640 GCTTTGAAACTTCTGAAATCTCCAAT 58.849 34.615 0.00 0.00 0.00 3.16
5207 6008 5.048713 CCGTAGGCTTTGAAACTTCTGAAAT 60.049 40.000 0.00 0.00 46.14 2.17
5274 6075 3.118884 TGCATAGTAACTTTCCTCGGACC 60.119 47.826 0.00 0.00 0.00 4.46
5278 6079 8.491152 CAGATTATTGCATAGTAACTTTCCTCG 58.509 37.037 0.00 0.00 0.00 4.63
5284 6085 9.672673 AGTTCACAGATTATTGCATAGTAACTT 57.327 29.630 0.00 0.00 0.00 2.66
5286 6087 9.098355 TGAGTTCACAGATTATTGCATAGTAAC 57.902 33.333 0.00 0.00 0.00 2.50
5303 6110 9.203421 CTATGTTACATTAGTGTTGAGTTCACA 57.797 33.333 2.23 0.00 39.77 3.58
5310 6117 8.038944 GGAGAACCTATGTTACATTAGTGTTGA 58.961 37.037 2.23 0.00 39.77 3.18
5325 6132 3.571401 GGCAAATCCATGGAGAACCTATG 59.429 47.826 21.33 11.27 34.10 2.23
5343 6150 1.020861 CACATGCAGAGCGTAGGCAA 61.021 55.000 10.48 0.00 41.43 4.52
5354 6161 4.482386 CCAAAGATCAGAAACACATGCAG 58.518 43.478 0.00 0.00 0.00 4.41
5384 6191 2.513753 TGTACTGGATTTGCAAGGGTG 58.486 47.619 0.00 0.00 0.00 4.61
5414 6222 8.788813 CAGTTATAAAATAACAAAAGAGCGCAG 58.211 33.333 11.47 0.00 0.00 5.18
5416 6224 7.966204 TCCAGTTATAAAATAACAAAAGAGCGC 59.034 33.333 0.00 0.00 0.00 5.92
5417 6225 9.834628 TTCCAGTTATAAAATAACAAAAGAGCG 57.165 29.630 11.30 0.00 0.00 5.03
5430 6238 9.672086 CAATCGAGTTGTTTTCCAGTTATAAAA 57.328 29.630 0.00 0.00 33.01 1.52
5447 6255 1.537202 GAGCAAGCCAACAATCGAGTT 59.463 47.619 0.00 0.00 0.00 3.01
5515 6327 4.552767 CGTACCTTTGTGAAGTGAAAGCAG 60.553 45.833 0.00 0.00 0.00 4.24
5557 6369 1.822990 CGTCTAACACCTAAGAGCCCA 59.177 52.381 0.00 0.00 0.00 5.36
5608 6421 3.084786 GGAGGAAGGAGTGACCATTTTG 58.915 50.000 0.00 0.00 42.04 2.44
5670 6488 2.277884 GGTGTGTTGTGCGTGCAC 60.278 61.111 17.72 17.72 46.33 4.57
5689 6507 0.391793 TTGCACTGACGTTGGTGTCA 60.392 50.000 18.33 14.66 46.15 3.58
5690 6508 0.944386 ATTGCACTGACGTTGGTGTC 59.056 50.000 18.33 12.94 39.37 3.67
5691 6509 0.662619 CATTGCACTGACGTTGGTGT 59.337 50.000 18.33 1.87 36.03 4.16
5692 6510 0.661187 GCATTGCACTGACGTTGGTG 60.661 55.000 8.44 14.67 36.62 4.17
5693 6511 1.654220 GCATTGCACTGACGTTGGT 59.346 52.632 8.44 0.00 0.00 3.67
5694 6512 1.081242 GGCATTGCACTGACGTTGG 60.081 57.895 11.39 0.00 0.00 3.77
5695 6513 1.081242 GGGCATTGCACTGACGTTG 60.081 57.895 11.39 0.00 0.00 4.10
5699 6517 1.081242 CGTTGGGCATTGCACTGAC 60.081 57.895 12.93 4.48 30.56 3.51
5704 6522 1.409064 TGTTTTACGTTGGGCATTGCA 59.591 42.857 11.39 0.00 0.00 4.08
5705 6523 1.790043 GTGTTTTACGTTGGGCATTGC 59.210 47.619 0.00 0.00 0.00 3.56
5718 6536 8.402472 CCATGTCAGTACTTTTCTTGTGTTTTA 58.598 33.333 0.00 0.00 0.00 1.52
5735 6553 3.639672 TGAATGAGCATCCATGTCAGT 57.360 42.857 0.00 0.00 0.00 3.41
5737 6555 3.959293 AGTTGAATGAGCATCCATGTCA 58.041 40.909 0.00 0.00 0.00 3.58
5739 6557 4.333649 CGTAAGTTGAATGAGCATCCATGT 59.666 41.667 0.00 0.00 0.00 3.21
5740 6558 4.571984 TCGTAAGTTGAATGAGCATCCATG 59.428 41.667 0.00 0.00 39.48 3.66
5741 6559 4.572389 GTCGTAAGTTGAATGAGCATCCAT 59.428 41.667 0.00 0.00 39.48 3.41
5742 6560 3.932710 GTCGTAAGTTGAATGAGCATCCA 59.067 43.478 0.00 0.00 39.48 3.41
5743 6561 3.000322 CGTCGTAAGTTGAATGAGCATCC 60.000 47.826 0.00 0.00 39.48 3.51
5745 6563 3.845178 TCGTCGTAAGTTGAATGAGCAT 58.155 40.909 0.00 0.00 39.48 3.79
5746 6564 3.242518 CTCGTCGTAAGTTGAATGAGCA 58.757 45.455 0.00 0.00 39.48 4.26
5747 6565 2.599082 CCTCGTCGTAAGTTGAATGAGC 59.401 50.000 0.00 0.00 39.48 4.26
5748 6566 4.092771 TCCTCGTCGTAAGTTGAATGAG 57.907 45.455 0.00 0.00 39.48 2.90
5749 6567 4.232221 GTTCCTCGTCGTAAGTTGAATGA 58.768 43.478 0.00 0.00 39.48 2.57
5750 6568 3.985279 TGTTCCTCGTCGTAAGTTGAATG 59.015 43.478 0.00 0.00 39.48 2.67
5836 7589 3.299977 TGCACAGGCCGACGTACT 61.300 61.111 0.00 0.00 40.13 2.73
5874 7627 4.443598 GCCGAGGGAAAAGATAGTGAAGAT 60.444 45.833 0.00 0.00 0.00 2.40
5878 7631 1.485066 GGCCGAGGGAAAAGATAGTGA 59.515 52.381 0.00 0.00 0.00 3.41
5921 7674 3.445687 ATGGCGCCGTCGTACTCA 61.446 61.111 23.90 0.00 38.14 3.41
5982 7735 1.352114 CATTCGCCCTCGTTCGTAAA 58.648 50.000 0.00 0.00 36.96 2.01
5983 7736 1.079875 GCATTCGCCCTCGTTCGTAA 61.080 55.000 0.00 0.00 36.96 3.18
6070 7830 2.357517 AGTTTCCAGCTGACGCCG 60.358 61.111 17.39 0.00 36.60 6.46
6212 7976 2.433604 TCTCAGAGGCTTATGCTGAAGG 59.566 50.000 5.31 0.00 38.12 3.46
6217 7981 4.833478 TTTCTTCTCAGAGGCTTATGCT 57.167 40.909 0.00 0.00 39.59 3.79
6218 7982 4.095632 GGTTTTCTTCTCAGAGGCTTATGC 59.904 45.833 0.00 0.00 38.76 3.14
6219 7983 4.637977 GGGTTTTCTTCTCAGAGGCTTATG 59.362 45.833 0.00 0.00 0.00 1.90
6220 7984 4.538089 AGGGTTTTCTTCTCAGAGGCTTAT 59.462 41.667 0.00 0.00 0.00 1.73
6221 7985 3.910627 AGGGTTTTCTTCTCAGAGGCTTA 59.089 43.478 0.00 0.00 0.00 3.09
6222 7986 2.713708 AGGGTTTTCTTCTCAGAGGCTT 59.286 45.455 0.00 0.00 0.00 4.35
6244 8008 2.301577 AAAGCTATGCGTGTCCTCTC 57.698 50.000 0.00 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.